![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Lag0033568 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAGACTTTGCTCGCGTGCAAAAGGAGCTCCAAGAATGCAGTAAAGACATTGAGGCTTCGGGTATTAGAGTCACCCCCAAAGCCGATAATCTTGCCCATTTGGTCGGCACCATTCCTGGCCCTGTCGCTACTCCTTACGAAGGTGGCACCTTCCAAATCGACATCACATTGCCAGGTGCCTCTCCATCCTCTTCCTCTTCTTCTACTTATTGTTTCATTCCTAGCTAAATTTGTATGTACGCACAACGTAAATGCTCTGAATCAGGTTAGCATTAGGGTTTCCGCGCAAGCACGTTATTTTGAGGTGGTTTAGCCGATGTAAAGAATATGGGTTGTGATTTTTGAGGCATTAGGGCTCTAATCTGTGATTATAAAAAAAAAAAAAAAAAACTTGGGGGTTTTGGTTATACAAAACATAGAACTGTTGAACAGTTCTCAAACTGTCCACAAGTTTTAGAATTTCTTTAACGGCTGTTTTCTTTTAGAAGTTTCCTGCATCCTTTCTTTCAAGGTTACTATGAAACATGAAGCCTTTGTGCGTTTTTGTCTACTTCCAATTGTTTTGACACAAATCTTTGCGGTAAAAAGTAAAATAAAGTGAAACGATTAAGAGTTGTTTTAATTTTATTAACCCGTTTATCGAAAACAATCCTGTTAAGCGTTTGAGGCATATTTATAATCACTCTCTGGTAAGCTTTGTTCAAAGAACCATTACTTGCTCCATTGAAATTTTATGGTAAAAGATTGTAAATTGTGCAAGTGTGTTCCGTGACTTCTTATCATGTTCCCGGAGTTTTTATAACATAGCCTTATCTTTTAATTGGCTGCTTACTATAATTTCCACGAGTGAAGTCTTTGTCTCAATGTTTTCTAAGGCGTAAGGTCTAAAGTGTATAGTCCTATAAGTGAGACATGTTGTTTGTGAGGCACACAATAGAATAATATTGTATTATTAATAATAAGACAATGAAAAATTTAAGAAATTAGAGCTTTTGAAAATTTGTTTAAAGAAATGAGGGATTTTGGAGGATATTTCTTGATTTTACAAATTAAAAAGGTTGAGATTTTACAGCATGCGCTTCAGTGAAGACCTCACTCATGGGAAACTTGCCTAATCGCATTTTCCAAACGCTGCTTTATCTAAACCCTTATCATATAATATCTTAGACGTGGATTTTTTCTTTATCCCTTGCAGATGGGTACCCATTTGAGCCCCCCAAAATGCAGTTTGCTACAAAAGTGTGGTAAGGACGATTTATGCATGACTTCCTTTCTTTTTACATCTGAGATTTTTTACTTGTGTGCATAGAGTGAGTTCGTGTTTAGCTTATGAAGTTGCCTTTTAGGGAACATGCAGATTTTTCTTTAATGTAATCAAATAATAACTGACTTGGAGCTTTCTTAACTTTGGATGAATGCTTGCTGTTTCTCTTTCCATGTGAATTTCAAAATAGTAATATTGAATGGGCAAAATTGGGGGTATCATCATACATGACTTAGTCTATCTTATAGTTTAGATACTGGGCTTGACTACATTTTCCTTTTTTTCCTTTCAATATTGGAATTGGAGATTTGGAGATCATCAATTGTGCATAAGCTGTTGTGATTTTCCTTCAACATGTTGTCATTGCTATGCATTCTGAAATTGTTCTAAAATGTTATTACCATCTAGGAGTTTGTGACTTCGTGTTCTTACCTAATTCATTTTATATGTGAGGTTATACTGAAACTTTAGAGTTTGTTTGGTATTTCTATTATGTTTTGAAGGCACCCTAATATCAGTAGTCAAAGTGGTGCAATATGCCTGGACATTTTGAAGGATCAGTGGAGCCCAGCACTTACGTTGAAGACAGCCCTGCTTTCTGTGCAGGCATTGCTTTCTGCTCCTCAACCTGATGATCCTCAAGATGCTGTCGTGGCGCAACAGGTATTGTTAAGTCTATCTTCACTGCATGGATGTTCGTTCTTTTTGCTTTAGGATGTTGGTACTGAAGATATGAACTTTAGTTTACCAACCCAACACATAATTGCTGCAGTATCTTAGAGACTACCAGACCTTTGCTGGCACAGCTCGATATTGGACAGAAACTTTTGCCAAGACGTCATCTCTTGGAATGGAAGAAAAGGTTAGTCTTAGCTTTGGTTTTGCGTGTTGTGTGCATGAGAAATCATTTAGGTTTGAGTTTGAGGAGTAGTTCTTCTGTTATGGTGGAAAAAGAAAGCGTGTGTGTGTTTGTGTGTACACTGAACATTGATGTGAAGGAAATGGTACAGGTTCAGAAACTTGTGGAGATGGGATTCCCGGAGGCTCAAGTAAGGAGCAGTTTGGAAGCTGTGGGTTGGGATGAAAATTTGGCTCTGGAAAAGCTATGCTCTGGCTAA ATGATAGACTTTGCTCGCGTGCAAAAGGAGCTCCAAGAATGCAGTAAAGACATTGAGGCTTCGGGTATTAGAGTCACCCCCAAAGCCGATAATCTTGCCCATTTGGTCGGCACCATTCCTGGCCCTGTCGCTACTCCTTACGAAGGTGGCACCTTCCAAATCGACATCACATTGCCAGATGGGTACCCATTTGAGCCCCCCAAAATGCAGTTTGCTACAAAAGTGTGGCACCCTAATATCAGTAGTCAAAGTGGTGCAATATGCCTGGACATTTTGAAGGATCAGTGGAGCCCAGCACTTACGTTGAAGACAGCCCTGCTTTCTGTGCAGGCATTGCTTTCTGCTCCTCAACCTGATGATCCTCAAGATGCTGTCGTGGCGCAACAGTATCTTAGAGACTACCAGACCTTTGCTGGCACAGCTCGATATTGGACAGAAACTTTTGCCAAGACGTCATCTCTTGGAATGGAAGAAAAGGTTCAGAAACTTGTGGAGATGGGATTCCCGGAGGCTCAAGTAAGGAGCAGTTTGGAAGCTGTGGGTTGGGATGAAAATTTGGCTCTGGAAAAGCTATGCTCTGGCTAA ATGATAGACTTTGCTCGCGTGCAAAAGGAGCTCCAAGAATGCAGTAAAGACATTGAGGCTTCGGGTATTAGAGTCACCCCCAAAGCCGATAATCTTGCCCATTTGGTCGGCACCATTCCTGGCCCTGTCGCTACTCCTTACGAAGGTGGCACCTTCCAAATCGACATCACATTGCCAGATGGGTACCCATTTGAGCCCCCCAAAATGCAGTTTGCTACAAAAGTGTGGCACCCTAATATCAGTAGTCAAAGTGGTGCAATATGCCTGGACATTTTGAAGGATCAGTGGAGCCCAGCACTTACGTTGAAGACAGCCCTGCTTTCTGTGCAGGCATTGCTTTCTGCTCCTCAACCTGATGATCCTCAAGATGCTGTCGTGGCGCAACAGTATCTTAGAGACTACCAGACCTTTGCTGGCACAGCTCGATATTGGACAGAAACTTTTGCCAAGACGTCATCTCTTGGAATGGAAGAAAAGGTTCAGAAACTTGTGGAGATGGGATTCCCGGAGGCTCAAGTAAGGAGCAGTTTGGAAGCTGTGGGTTGGGATGAAAATTTGGCTCTGGAAAAGCTATGCTCTGGCTAA MIDFARVQKELQECSKDIEASGIRVTPKADNLAHLVGTIPGPVATPYEGGTFQIDITLPDGYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPQPDDPQDAVVAQQYLRDYQTFAGTARYWTETFAKTSSLGMEEKVQKLVEMGFPEAQVRSSLEAVGWDENLALEKLCSG Homology
BLAST of Lag0033568 vs. NCBI nr
Match: XP_022988308.1 (ubiquitin-conjugating enzyme E2 27 [Cucurbita maxima]) HSP 1 Score: 388.7 bits (997), Expect = 3.0e-104 Identity = 190/194 (97.94%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of Lag0033568 vs. NCBI nr
Match: XP_023515392.1 (ubiquitin-conjugating enzyme E2 27 [Cucurbita pepo subsp. pepo] >KAG6589354.1 Ubiquitin-conjugating enzyme E2 27, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023040.1 Ubiquitin-conjugating enzyme E2 27 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 388.3 bits (996), Expect = 4.0e-104 Identity = 189/194 (97.42%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of Lag0033568 vs. NCBI nr
Match: XP_022921627.1 (ubiquitin-conjugating enzyme E2 27 [Cucurbita moschata] >XP_022921628.1 ubiquitin-conjugating enzyme E2 27 [Cucurbita moschata]) HSP 1 Score: 387.5 bits (994), Expect = 6.8e-104 Identity = 189/194 (97.42%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of Lag0033568 vs. NCBI nr
Match: XP_022135200.1 (ubiquitin-conjugating enzyme E2 27 [Momordica charantia]) HSP 1 Score: 384.4 bits (986), Expect = 5.7e-103 Identity = 189/194 (97.42%), Postives = 193/194 (99.48%), Query Frame = 0
BLAST of Lag0033568 vs. NCBI nr
Match: XP_008464378.1 (PREDICTED: ubiquitin-conjugating enzyme E2 27 [Cucumis melo] >KAA0057744.1 ubiquitin-conjugating enzyme E2 27 [Cucumis melo var. makuwa] >TYJ98427.1 ubiquitin-conjugating enzyme E2 27 [Cucumis melo var. makuwa]) HSP 1 Score: 382.9 bits (982), Expect = 1.7e-102 Identity = 185/194 (95.36%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of Lag0033568 vs. ExPASy Swiss-Prot
Match: Q9FI61 (Ubiquitin-conjugating enzyme E2 27 OS=Arabidopsis thaliana OX=3702 GN=UBC27 PE=2 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 1.7e-86 Identity = 152/193 (78.76%), Postives = 176/193 (91.19%), Query Frame = 0
BLAST of Lag0033568 vs. ExPASy Swiss-Prot
Match: P52484 (Probable ubiquitin-conjugating enzyme E2 21 OS=Caenorhabditis elegans OX=6239 GN=ubc-21 PE=3 SV=3) HSP 1 Score: 188.0 bits (476), Expect = 1.0e-46 Identity = 94/190 (49.47%), Postives = 125/190 (65.79%), Query Frame = 0
BLAST of Lag0033568 vs. ExPASy Swiss-Prot
Match: P61085 (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus OX=9913 GN=UBE2K PE=1 SV=3) HSP 1 Score: 184.9 bits (468), Expect = 8.8e-46 Identity = 96/192 (50.00%), Postives = 126/192 (65.62%), Query Frame = 0
BLAST of Lag0033568 vs. ExPASy Swiss-Prot
Match: P61086 (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens OX=9606 GN=UBE2K PE=1 SV=3) HSP 1 Score: 184.9 bits (468), Expect = 8.8e-46 Identity = 96/192 (50.00%), Postives = 126/192 (65.62%), Query Frame = 0
BLAST of Lag0033568 vs. ExPASy Swiss-Prot
Match: P61087 (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus OX=10090 GN=Ube2k PE=1 SV=3) HSP 1 Score: 184.9 bits (468), Expect = 8.8e-46 Identity = 96/192 (50.00%), Postives = 126/192 (65.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|