Lag0033299 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0033299
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionguanine nucleotide-binding protein subunit gamma 2-like
Locationchr11: 42592221 .. 42595825 (-)
RNA-Seq ExpressionLag0033299
SyntenyLag0033299
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAATGGATCGACCAACGGGAAGACGGAGCTTACCGCTATGGCAACAACAGCTTAGCAGAGTGAGGCGGACAGTTGAGAAGGTCGATTGTGTGGAATGGAAAGAGTTAACGCCAACGCCACTCGTGAGCCGAGCATTTGTGTGGCGCTACACAAATTTCCAATTAGAAAGCGACTTTTTCTTTTTCCTTATATATATATATATAAATTACAAGTTTAGTTTTGACTTAAAAGATCTCTCGACATTCAAAAGAAGTATCTAATATGTTATCAAACTTTATAGGGATTGACAAGGGGTGAAGCGCCCGGTGGGGGTTCGGGGGCAACGCCCCCTAAGCTAAATTATGTATAGGGATTAGATATGATATTTCCGTTTTGGACTTTTATTTGGGCCTATTATGTTAGGGTCAAGAGTGGTGTCATATATAAACCCTCTTAACCTATTTTTGCCCTAATCTCTGTATTCTGAATACTCCTCACATAATAAGATCGTTCTCTCCCTCTGCCCGTGGACGTATATCTGTGTGTTGTTTCTCTTCGCCCTTTCGTTCTTGTTACGTTGTTACTGTTTTCGTCATAACAACATATTTGATTGAAGAATGAAGTGCAACATGTGTTCAATACATGACCCTGTACCTCGATCTAAAGGTTAAAGTTTTGAATTTTCACTTTCTGCATATTGTTGAACTAAAAAACACACAACTTGATGGTTTTTTGTTTTATTATTATTGTTTAAGTAGACCAAACATTTAAATGCAATAAATTAGTTTTATGTATGAAATGTAATTGTAGTGTCTTAGACATACAAATACTATAATAATCTTGACCTAAAGGTTAAAACACTACATCGTTCTCTTAAAGTTGAAGATTCAAATTTTCACCACAAGAAAACATAAAATTAATATTTATGTATAGTTCACAATTAAGTTAATTTAAAACCCCCAAAATATATATATATATATATATATATATATATATATGTATAAACTATAGTTTAAATTTAGAATTAACATGTATAGTTTAAATTTAGAATTAACCACCCCCCCCCCCCCAAAAAAAAACCAACTTCTACAAAAATTGTTAATATAAATGAAAATGATAGTAATGAGCCACAAAACATGTCAAATATTAACTTAAAAAAAAAAAAAAAAAAAAAAAAAAGTCCATAAATAAAATGGCAAAGCTTTTTTTAGGGAGACAATAAACTAATTAGAAATTGTAAGCCGGTTTTATAAATTATAATATAGTTACAAATCGAATTAAATATAGTATTAAATTGCTAATTATTTAAAATTATTTATACCAATATTCTATACCTTTGCCCATTCCCATTTTTGCCATCAATCTACACCTGCCACGATTTTGTTTCTAAACCATAATATTTTCAGATCAAAAAATAGAAAAAAAGGAGAAACGTCCAGAATTTCAAGAGAATAAAAATATTCATAAAGCAGAATTACTTTAATTTTTAATTAAAAAAATTACAAATTTTTCATTGAAATTGTACTTGTAGCGTGGGAAGTTTTAGAAACTTAAAACGGAAACCAGAAACAAAAGAAGAGCAAAATCTCGATTAGCACATCAAATTTTGGGATCTCCCTTTCTTTCTCGTCTGTGGAATGAGATTTGTAGGTCGAAGAATGGTTCGGCTTATTGAAATCCGGTGAGCTTTTCAATTCAATTTCGCTTGTTCCATGGAACTAGAGAAGCAGTGATTGTGGATTGTGTGTTGCGGAGCTCCATTTTGGTTTACGGTAATGGCGTCGTCTTTGGATGGACAGCTCGTCCACGAGGCTGCAATTGGAGTCGGAACCGCCGTTGACTCCAGAGGAAAGCATCGCATTCTCGCGGAGCTCAAGCGTCTTGAACAAGAACTCAGATACTTGCAGGTTTTTGTTCACTTCTTTTCTGCGATTGTGACTTATTTGCTGTTTGTTTCGAGCATTTCCCTAAATTTTTTGATAGTTCAAATCATTTGCCTGTTCATGATCTTTGTATGAAATTCTGAAACAATGAAGGAAATGAAAACTCCTTTTATAAAAGAAGATTCAATTATAGCAAAAACAGTATGGCGTGACTGAAGAAATTAGGCTTGTTTGCTATCCCTTTTATGCTCAGAAATTGAAGCCGTAGATATTCTCTTTAGAGGTTTTTAAGTTTTGAGCAAATTTTTAAGATGAATTGTTCGATAATTACGAAACTTAAAACTTGGAGACACCGATATCAAGTGTTACTTAAAGCGCTTATTTCTTCTTGAAGTAAATCAGTAAGCTAAAGTCATTCCCCTTTGATTACAAATTGTGTATTGAGTACCGCAAGACCTTAATTCTTGACTCGAACATTTGAATCTAAGTTGGCATTTTACTATGGTACGAGGAATTTGGAGATGCAGACTTGCTTGAGATCAAACTATTGGAAATTATAATTGACATTGTCTCACAAGAGAATATGTAAGCAGAGTTGAGCTCCAATTAGAGTGCATCAACTCAACTGCGATCTTTTGTTGTCTACTAGAAGAAAACTTCTTGGGACTAGTCGAAGGAGAGACTGAAATTATCAATATAAAGGGCAGCTAATTTAATTTTTATATTAATGTTTGAATTTGTTATCAAGTTTCAAGTTAGATAGTATGGGAGTTTATCGTATGAAATTTTCTTGTGATAGCAATGGTCGAATTTTTTTTTATCTAGTTTCAAGTTATAAAACATGAAAGTTTTTTGTACAAAGTTACTTGTTTCTTCGTCAGTTCACATATTTTTTCCAGCAATACCATATACAATCTATCATCTGTGAATCTAAAATGAGCTAATAGCTTCATGAGGGTATTTTTAACTTTGATTTCCATATATTTTACCGGGTTGACAGAACCGTTTGAAATCTTCTCATGTGCTTGTATTGTCTTTGTTTGCGAATGCAGCTGCCTATTTGAGGTAGCTGTATACCTTTTTTGTACCTACCATTCCTGAAGCCAAGGTTGTCACTTATTTCATTTGGGGAAGATCTAGAGTTAACTAGCTGAGCCTATTCATCATTTTTAAGTCTTCGTGCCATATACAGACTTTCAAGCCTTTGTATCATCAATTTGACTAACATAACAAGAAGCTGGGAACAAGCCATGATTTCTCTCCTTTGCTTTGGTATCTATATACCCTTTCAGTATTGAGTTGATTACTGACTTGTAAATGATTTCTTCTTTCTGTAAATTCTGTCCAGGAAGAATTGGAAGAAGTTGAAAAAATGGGAAACATCTCATCTATATGCAAGGAGTAAGTCAAATAATCCTTCTTATTCCTTTTCCCTTTCATTTCTCGTATTGCAATTGGGATTGAATACATATTTTCATTTCTACATTTCCAAATGAAGTTGAATACAAGTTTATAAATGATCTTTTTTCATGCTCTCAGGTTCCTTCCCTGCATTGAAACCAAACCGGATCCACTTTTGCCTGTGTAAGTTCTACACAACGTCCTCCCTCATCCATCTTGGTCCATTTTTCTTATCAGCTTAATTTGTCTACAGGCTGAATGGTGCTGTAAATCCGCTATGGGATCGCTGGTTCGAAGGATCCCCAAGCTCACCAGAGTGTAGCTGCTGGATTCTCTAG

mRNA sequence

ATGTCAATGGATCGACCAACGGGAAGACGGAGCTTACCGCTATGGCAACAACAGCTTAGCAGAGTGAGGCGGACAGTTGAGAAGGTCGATTGTGTGGAATGGAAAGAGTTAACGCCAACGCCACTCCTCGTCCACGAGGCTGCAATTGGAGTCGGAACCGCCGTTGACTCCAGAGGAAAGCATCGCATTCTCGCGGAGCTCAAGCGTCTTGAACAAGAACTCAGATACTTGCAGGAAGAATTGGAAGAAGTTGAAAAAATGGGAAACATCTCATCTATATGCAAGGAGTTCCTTCCCTGCATTGAAACCAAACCGGATCCACTTTTGCCTGTGCTGAATGGTGCTGTAAATCCGCTATGGGATCGCTGGTTCGAAGGATCCCCAAGCTCACCAGAGTGTAGCTGCTGGATTCTCTAG

Coding sequence (CDS)

ATGTCAATGGATCGACCAACGGGAAGACGGAGCTTACCGCTATGGCAACAACAGCTTAGCAGAGTGAGGCGGACAGTTGAGAAGGTCGATTGTGTGGAATGGAAAGAGTTAACGCCAACGCCACTCCTCGTCCACGAGGCTGCAATTGGAGTCGGAACCGCCGTTGACTCCAGAGGAAAGCATCGCATTCTCGCGGAGCTCAAGCGTCTTGAACAAGAACTCAGATACTTGCAGGAAGAATTGGAAGAAGTTGAAAAAATGGGAAACATCTCATCTATATGCAAGGAGTTCCTTCCCTGCATTGAAACCAAACCGGATCCACTTTTGCCTGTGCTGAATGGTGCTGTAAATCCGCTATGGGATCGCTGGTTCGAAGGATCCCCAAGCTCACCAGAGTGTAGCTGCTGGATTCTCTAG

Protein sequence

MSMDRPTGRRSLPLWQQQLSRVRRTVEKVDCVEWKELTPTPLLVHEAAIGVGTAVDSRGKHRILAELKRLEQELRYLQEELEEVEKMGNISSICKEFLPCIETKPDPLLPVLNGAVNPLWDRWFEGSPSSPECSCWIL
Homology
[Close]
BLAST of Lag0033299 vs. NCBI nr
Match: XP_022995508.1 (guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita maxima])

HSP 1 Score: 185.3 bits (469), Expect = 3.6e-43
Identity = 86/96 (89.58%), Postives = 90/96 (93.75%), Query Frame = 0 

Query: 43  LVHEAAIGVGTAVDSRGKHRILAELKRLEQELRYLQEELEEVEKMGNISSICKEFLPCIE 102
           LV +AAIGVGT VDSRGKHRILAELKRLEQELRYLQEELEEVEKMGNISS+CK+ LPCIE
Sbjct: 9   LVPQAAIGVGTVVDSRGKHRILAELKRLEQELRYLQEELEEVEKMGNISSLCKDLLPCIE 68

Query: 103 TKPDPLLPVLNGAVNPLWDRWFEGSPSSPECSCWIL 139
           TK DPLLPVLNG VNPLWDRWFEGSPSSP+C CWIL
Sbjct: 69  TKSDPLLPVLNGVVNPLWDRWFEGSPSSPDCGCWIL 104

[Close]
BLAST of Lag0033299 vs. NCBI nr
Match: XP_023534264.1 (guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.3 bits (464), Expect = 1.4e-42
Identity = 85/96 (88.54%), Postives = 89/96 (92.71%), Query Frame = 0 

Query: 43  LVHEAAIGVGTAVDSRGKHRILAELKRLEQELRYLQEELEEVEKMGNISSICKEFLPCIE 102
           LV + AIGVGT VDSRGKHRILAELKRLEQELRYLQEELEEVEKMGNISS+CK+ LPCIE
Sbjct: 9   LVPQPAIGVGTVVDSRGKHRILAELKRLEQELRYLQEELEEVEKMGNISSLCKDLLPCIE 68

Query: 103 TKPDPLLPVLNGAVNPLWDRWFEGSPSSPECSCWIL 139
           TK DPLLPVLNG VNPLWDRWFEGSPSSP+C CWIL
Sbjct: 69  TKSDPLLPVLNGVVNPLWDRWFEGSPSSPDCGCWIL 104

[Close]
BLAST of Lag0033299 vs. NCBI nr
Match: XP_038888386.1 (guanine nucleotide-binding protein subunit gamma 2-like [Benincasa hispida] >XP_038888387.1 guanine nucleotide-binding protein subunit gamma 2-like [Benincasa hispida])

HSP 1 Score: 183.0 bits (463), Expect = 1.8e-42
Identity = 86/95 (90.53%), Postives = 89/95 (93.68%), Query Frame = 0 

Query: 44  VHEAAIGVGTAVDSRGKHRILAELKRLEQELRYLQEELEEVEKMGNISSICKEFLPCIET 103
           V EA+IGVGT VDSRGKHRILAELKRLEQELRYLQEELEEVEKMGNISSIC++ LPCIET
Sbjct: 10  VTEASIGVGTVVDSRGKHRILAELKRLEQELRYLQEELEEVEKMGNISSICEDLLPCIET 69

Query: 104 KPDPLLPVLNGAVNPLWDRWFEGSPSSPECSCWIL 139
           K DPLLPVLNG VNPLW RWFEGSPSSPECSCWIL
Sbjct: 70  KSDPLLPVLNGVVNPLWHRWFEGSPSSPECSCWIL 104

[Close]
BLAST of Lag0033299 vs. NCBI nr
Match: XP_022931145.1 (guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita moschata] >KAG6606403.1 Guanine nucleotide-binding protein subunit gamma 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036345.1 Guanine nucleotide-binding protein subunit gamma 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181.8 bits (460), Expect = 4.0e-42
Identity = 84/96 (87.50%), Postives = 88/96 (91.67%), Query Frame = 0 

Query: 43  LVHEAAIGVGTAVDSRGKHRILAELKRLEQELRYLQEELEEVEKMGNISSICKEFLPCIE 102
           LV + AIGVGT VDSRGKHRILAELK LEQELRYLQEELEEVEKMGNISS+CK+ LPCIE
Sbjct: 11  LVPQPAIGVGTVVDSRGKHRILAELKHLEQELRYLQEELEEVEKMGNISSVCKDLLPCIE 70

Query: 103 TKPDPLLPVLNGAVNPLWDRWFEGSPSSPECSCWIL 139
           TK DPLLPVLNG VNPLWDRWFEGSPSSP+C CWIL
Sbjct: 71  TKSDPLLPVLNGVVNPLWDRWFEGSPSSPDCGCWIL 106

[Close]
BLAST of Lag0033299 vs. NCBI nr
Match: XP_004145370.1 (guanine nucleotide-binding protein subunit gamma 2 [Cucumis sativus] >KGN61700.1 hypothetical protein Csa_006675 [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 5.3e-42
Identity = 85/96 (88.54%), Postives = 88/96 (91.67%), Query Frame = 0 

Query: 43  LVHEAAIGVGTAVDSRGKHRILAELKRLEQELRYLQEELEEVEKMGNISSICKEFLPCIE 102
           LV  A+IGVG  VDSRGKHRILAELKRLEQELRYLQEEL+EVEKMGNISSICK+ LPCIE
Sbjct: 9   LVTSASIGVGAVVDSRGKHRILAELKRLEQELRYLQEELDEVEKMGNISSICKDLLPCIE 68

Query: 103 TKPDPLLPVLNGAVNPLWDRWFEGSPSSPECSCWIL 139
           TK DPLLPVLNG VNP WDRWFEGSPSSPECSCWIL
Sbjct: 69  TKTDPLLPVLNGVVNPSWDRWFEGSPSSPECSCWIL 104

[Close]
BLAST of Lag0033299 vs. ExPASy Swiss-Prot
Match: Q93V47 (Guanine nucleotide-binding protein subunit gamma 2 OS=Arabidopsis thaliana OX=3702 GN=GG2 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.5e-26
Identity = 54/87 (62.07%), Postives = 65/87 (74.71%), Query Frame = 0 

Query: 52  GTAVDSRGKHRILAELKRLEQELRYLQEELEEVEKMGNISSICKEFLPCIETKPDPLLPV 111
           G  VD+RGKHRI AELKRLEQE R+L+EELE++EKM N S+ CKEFL  +++KPDPLLP 
Sbjct: 14  GRVVDTRGKHRIQAELKRLEQEARFLEEELEQLEKMDNASASCKEFLDSVDSKPDPLLPE 73

Query: 112 LNGAVNPLWDRWFEGSPSSPECSCWIL 139
             G VN  WD+WFEG   +  C C IL
Sbjct: 74  TTGPVNATWDQWFEGPKEAKRCGCSIL 100

[Close]
BLAST of Lag0033299 vs. ExPASy Swiss-Prot
Match: B8AN27 (Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. indica OX=39946 GN=RGG1 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.4e-21
Identity = 47/89 (52.81%), Postives = 59/89 (66.29%), Query Frame = 0 

Query: 50  GVGTAVDSRGKHRILAELKRLEQELRYLQEELEEVEKMGNISSICKEFLPCIETKPDPLL 109
           G G A D+RG+HRI AELK+LEQE R+L+EELEE++K   +S+  +E +   E+K DPLL
Sbjct: 5   GGGDAGDTRGRHRIQAELKKLEQEARFLEEELEELDKTDKVSAALQELMVTAESKADPLL 64

Query: 110 PVLNGAVNPLWDRWFEGSPSSPECSCWIL 139
           PV  G     WDRWFEG      C CW L
Sbjct: 65  PVTTGPACQSWDRWFEGPQDLRRCKCWFL 93

[Close]
BLAST of Lag0033299 vs. ExPASy Swiss-Prot
Match: Q75WU1 (Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGG1 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.4e-21
Identity = 47/89 (52.81%), Postives = 59/89 (66.29%), Query Frame = 0 

Query: 50  GVGTAVDSRGKHRILAELKRLEQELRYLQEELEEVEKMGNISSICKEFLPCIETKPDPLL 109
           G G A D+RG+HRI AELK+LEQE R+L+EELEE++K   +S+  +E +   E+K DPLL
Sbjct: 5   GGGDAGDTRGRHRIQAELKKLEQEARFLEEELEELDKTDKVSAALQELMVTAESKADPLL 64

Query: 110 PVLNGAVNPLWDRWFEGSPSSPECSCWIL 139
           PV  G     WDRWFEG      C CW L
Sbjct: 65  PVTTGPACQSWDRWFEGPQDLRRCKCWFL 93

[Close]
BLAST of Lag0033299 vs. ExPASy Swiss-Prot
Match: Q9FDX9 (Guanine nucleotide-binding protein subunit gamma 1 OS=Arabidopsis thaliana OX=3702 GN=GG1 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.7e-20
Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 0 

Query: 59  GKHRILAELKRLEQELRYLQEELEEVEKMGNISSICKEFLPCIETKPDPLLPVLNGAVNP 118
           GKHRILAEL R+EQE+ +L++EL+EVE    +S++C+E L  IE  PDPLLP+ NG +N 
Sbjct: 19  GKHRILAELARVEQEVAFLEKELKEVENTDIVSTVCEELLSVIEKGPDPLLPLTNGPLNL 78

Query: 119 LWDRWFEGSPSSPECSCWIL 139
            WDRWFEG      C C IL
Sbjct: 79  GWDRWFEGPNGGEGCRCLIL 98

[Close]
BLAST of Lag0033299 vs. ExPASy Swiss-Prot
Match: A2X0N9 (Guanine nucleotide-binding protein subunit gamma 2 OS=Oryza sativa subsp. indica OX=39946 GN=RGG2 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.0e-12
Identity = 40/91 (43.96%), Postives = 53/91 (58.24%), Query Frame = 0 

Query: 49  IGVGTAVDS---RGKHRILAELKRLEQELRYLQEELEEVEKMGNISSICKEFLPCIETKP 108
           +G G A+ S    GKHR+ A + RL+QEL+ LQ+EL E+E M   S+ C+  +   E K 
Sbjct: 52  VGGGAAMRSVGYVGKHRLSAAIARLDQELQSLQDELNELETMEPASAACQGVITSTEGKS 111

Query: 109 DPLLPVLNGAVNPLWDRWFEGSPSSPECSCW 137
           DPLLPV  G  N  W+RWF+   SS     W
Sbjct: 112 DPLLPVTIGPENASWERWFQRVRSSRSNKWW 142

The following BLAST results are available for this feature:
BLAST of Lag0033299 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022995508.13.6e-4389.58guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita maxima][more]
XP_023534264.11.4e-4288.54guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita pepo subsp. p... [more]
XP_038888386.11.8e-4290.53guanine nucleotide-binding protein subunit gamma 2-like [Benincasa hispida] >XP_... [more]
XP_022931145.14.0e-4287.50guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita moschata] >KA... [more]
XP_004145370.15.3e-4288.54guanine nucleotide-binding protein subunit gamma 2 [Cucumis sativus] >KGN61700.1... [more]
BLAST of Lag0033299 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93V472.5e-2662.07Guanine nucleotide-binding protein subunit gamma 2 OS=Arabidopsis thaliana OX=37... [more]
B8AN272.4e-2152.81Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. indica... [more]
Q75WU12.4e-2152.81Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. japoni... [more]
Q9FDX97.7e-2056.25Guanine nucleotide-binding protein subunit gamma 1 OS=Arabidopsis thaliana OX=37... [more]
A2X0N92.0e-1243.96Guanine nucleotide-binding protein subunit gamma 2 OS=Oryza sativa subsp. indica... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 60..87
NoneNo IPR availableSMARTSM01224G_gamma_2coord: 64..138
e-value: 9.6E-11
score: 51.7
NoneNo IPR availablePANTHERPTHR35129:SF3GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 2coord: 47..138
NoneNo IPR availablePANTHERPTHR35129GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 1coord: 47..138
IPR015898G-protein gamma-like domainPFAMPF00631G-gammacoord: 66..138
e-value: 8.5E-12
score: 44.9

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0033299.1Lag0033299.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010540 basipetal auxin transport
biological_process GO:0007186 G protein-coupled receptor signaling pathway
biological_process GO:0048527 lateral root development
biological_process GO:0018345 protein palmitoylation
biological_process GO:0018342 protein prenylation
biological_process GO:0009845 seed germination
cellular_component GO:0005834 heterotrimeric G-protein complex