Lag0033290 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0033290
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	U3 small nucleolar RNA-associated protein 18 homolog
Location	chr11: 42495429 .. 42496550 (-)
RNA-Seq Expression	Lag0033290
Synteny	Lag0033290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCGCTCTGCAAATAGTTCCATTTCTGCATATGAAAATGATTTTGGGCTCCTAGACGAGAGTGCTATTAATGAGGAACCTCAGCAAAGAAAACCAGTATGGGTTGATGAGGAAGAGGAGAAGGCCACTGTTAATATTACTAATGTTAGTAGACTGAGAAAATTGAGGAAGGAAGAAGATGAGAATTCGATTTCGGGCTCAGAGTATGTGTCAAGACTTAGGGCTCAGCATGCAAAGCTAAATCCAGGCACCGAGTGGGCTCAACTTGATGCACAATCCAGGGGTGGCAGTGATGATGATGATCTATCATCAGATGATGAAAATGGAGTTGTGTTGGCTGATGGTTATGATAATGTTGATTCTATCGATGATATCCTGCGAACGAGTGAGAATCTTGTTGTGAAGAGTGGTGCTAAATTGTTGCCTGGTCTTCTTGAATACTCAAGACTTGTAGATGCTAACGCAGAGGAACCATCTAATGGTCCTATCAATTCGGTTCAGTTTCATCGCAATGCTCAGTTACTGCTAGCTACTGGATTGGATCGGAGGCTTAGATTTTTTCAGATCGATGGTAAACGGAATACCAAAATTCAGAGCATTTTTCTTGAAGATTGCCCCATACGTAAGGCATCATTTTTGCCTGATGGATCACAGGTAATCATAGCTGGGAGGAGAAAGTTTTTCTATAGCCTCGATCTAGTGAAAGCAAAAGTAGATAAAATCGGCCCTCTTGTTGGTAGAGAGGAGAAAAGCCTTGAAGTTTTCGAAGTTTCTCCAGATTCTAGCACAGTTGCTTTTATAGGAAATGAAGGCTATATCCTGTTAGTGTCAACCAAAACAAAGGAGCTCATTGGCACGCTTAAGATGAATGGAACCGTTCGTTCTTTGGCATTTGCTGACGAAGGACGACAGTTACTGAGCTCTGGCGGCGACGGGCAGGTCTACCACTGGGATTTGAGAACAAGAACGTGCATCCACAAGGCTGTCGACGAAGGTTGCATCAATGGTACTGCACTTTGTACATCTTCTAATGGAGCATTGTTTGCAGCTGGTTCAGACAGTGGCATTGTTAACATCTACAACAGACAAGAATTCTTAGGGGGCAAAAGAAGCCATTGA

mRNA sequence

ATGGACCGCTCTGCAAATAGTTCCATTTCTGCATATGAAAATGATTTTGGGCTCCTAGACGAGAGTGCTATTAATGAGGAACCTCAGCAAAGAAAACCAGTATGGGTTGATGAGGAAGAGGAGAAGGCCACTGTTAATATTACTAATGTTAGTAGACTGAGAAAATTGAGGAAGGAAGAAGATGAGAATTCGATTTCGGGCTCAGAGTATGTGTCAAGACTTAGGGCTCAGCATGCAAAGCTAAATCCAGGCACCGAGTGGGCTCAACTTGATGCACAATCCAGGGGTGGCAGTGATGATGATGATCTATCATCAGATGATGAAAATGGAGTTGTGTTGGCTGATGGTTATGATAATGTTGATTCTATCGATGATATCCTGCGAACGAGTGAGAATCTTGTTGTGAAGAGTGGTGCTAAATTGTTGCCTGGTCTTCTTGAATACTCAAGACTTGTAGATGCTAACGCAGAGGAACCATCTAATGGTCCTATCAATTCGGTTCAGTTTCATCGCAATGCTCAGTTACTGCTAGCTACTGGATTGGATCGGAGGCTTAGATTTTTTCAGATCGATGGTAAACGGAATACCAAAATTCAGAGCATTTTTCTTGAAGATTGCCCCATACGTAAGGCATCATTTTTGCCTGATGGATCACAGGTAATCATAGCTGGGAGGAGAAAGTTTTTCTATAGCCTCGATCTAGTGAAAGCAAAAGTAGATAAAATCGGCCCTCTTGTTGGTAGAGAGGAGAAAAGCCTTGAAGTTTTCGAAGTTTCTCCAGATTCTAGCACAGTTGCTTTTATAGGAAATGAAGGCTATATCCTGTTAGTGTCAACCAAAACAAAGGAGCTCATTGGCACGCTTAAGATGAATGGAACCGTTCGTTCTTTGGCATTTGCTGACGAAGGACGACAGTTACTGAGCTCTGGCGGCGACGGGCAGGTCTACCACTGGGATTTGAGAACAAGAACGTGCATCCACAAGGCTGTCGACGAAGGTTGCATCAATGGTACTGCACTTTGTACATCTTCTAATGGAGCATTGTTTGCAGCTGGTTCAGACAGTGGCATTGTTAACATCTACAACAGACAAGAATTCTTAGGGGGCAAAAGAAGCCATTGA

Coding sequence (CDS)

ATGGACCGCTCTGCAAATAGTTCCATTTCTGCATATGAAAATGATTTTGGGCTCCTAGACGAGAGTGCTATTAATGAGGAACCTCAGCAAAGAAAACCAGTATGGGTTGATGAGGAAGAGGAGAAGGCCACTGTTAATATTACTAATGTTAGTAGACTGAGAAAATTGAGGAAGGAAGAAGATGAGAATTCGATTTCGGGCTCAGAGTATGTGTCAAGACTTAGGGCTCAGCATGCAAAGCTAAATCCAGGCACCGAGTGGGCTCAACTTGATGCACAATCCAGGGGTGGCAGTGATGATGATGATCTATCATCAGATGATGAAAATGGAGTTGTGTTGGCTGATGGTTATGATAATGTTGATTCTATCGATGATATCCTGCGAACGAGTGAGAATCTTGTTGTGAAGAGTGGTGCTAAATTGTTGCCTGGTCTTCTTGAATACTCAAGACTTGTAGATGCTAACGCAGAGGAACCATCTAATGGTCCTATCAATTCGGTTCAGTTTCATCGCAATGCTCAGTTACTGCTAGCTACTGGATTGGATCGGAGGCTTAGATTTTTTCAGATCGATGGTAAACGGAATACCAAAATTCAGAGCATTTTTCTTGAAGATTGCCCCATACGTAAGGCATCATTTTTGCCTGATGGATCACAGGTAATCATAGCTGGGAGGAGAAAGTTTTTCTATAGCCTCGATCTAGTGAAAGCAAAAGTAGATAAAATCGGCCCTCTTGTTGGTAGAGAGGAGAAAAGCCTTGAAGTTTTCGAAGTTTCTCCAGATTCTAGCACAGTTGCTTTTATAGGAAATGAAGGCTATATCCTGTTAGTGTCAACCAAAACAAAGGAGCTCATTGGCACGCTTAAGATGAATGGAACCGTTCGTTCTTTGGCATTTGCTGACGAAGGACGACAGTTACTGAGCTCTGGCGGCGACGGGCAGGTCTACCACTGGGATTTGAGAACAAGAACGTGCATCCACAAGGCTGTCGACGAAGGTTGCATCAATGGTACTGCACTTTGTACATCTTCTAATGGAGCATTGTTTGCAGCTGGTTCAGACAGTGGCATTGTTAACATCTACAACAGACAAGAATTCTTAGGGGGCAAAAGAAGCCATTGA

Protein sequence

MDRSANSSISAYENDFGLLDESAINEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDLSSDDENGVVLADGYDNVDSIDDILRTSENLVVKSGAKLLPGLLEYSRLVDANAEEPSNGPINSVQFHRNAQLLLATGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADEGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSSNGALFAAGSDSGIVNIYNRQEFLGGKRSH

Homology

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BLAST of Lag0033290 vs. NCBI nr
Match: XP_022963504.1 (U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita moschata])

HSP 1 Score: 684.5 bits (1765), Expect = 5.2e-193
Identity = 349/372 (93.82%), Postives = 361/372 (97.04%), Query Frame = 0


Query: 1   MDRSANSSISAYENDFGLLDESAINEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEE 60
           MDRSAN+S+S YEND GLLDES+  EE QQRKPVWVDEEEEKA+VNITNVSRLRKLRKEE
Sbjct: 107 MDRSANNSLSVYENDVGLLDESSNKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEE 166

Query: 61  DENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGS-DDDDLSSDDENGVVLADGYDN 120
           DE SISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGS DDDDL+SDDEN V LADGYDN
Sbjct: 167 DEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDN 226

Query: 121 VDSIDDILRTSENLVVKSGAKLLPGLLEYSRLVDANAEEPSNGPINSVQFHRNAQLLLAT 180
           VDSIDDILRT+ENLV KSGAKLLPGLLEYSRLVDANA+EPSNGPI+SVQFHRNAQLLLAT
Sbjct: 227 VDSIDDILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLAT 286

Query: 181 GLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKV 240
           GLDR+LRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVII+GRRKFFYSLDLVKAKV
Sbjct: 287 GLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKV 346

Query: 241 DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF 300
           DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF
Sbjct: 347 DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF 406

Query: 301 ADEGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSSNGALFAAGSDSGIVN 360
           AD+GRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTS NGALFAAGSDSGIVN
Sbjct: 407 ADDGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVN 466

Query: 361 IYNRQEFLGGKR 372
           IYNRQEFLGGK+
Sbjct: 467 IYNRQEFLGGKK 478

[Close]

BLAST of Lag0033290 vs. NCBI nr
Match: XP_023511721.1 (U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 684.5 bits (1765), Expect = 5.2e-193
Identity = 349/372 (93.82%), Postives = 361/372 (97.04%), Query Frame = 0


Query: 1   MDRSANSSISAYENDFGLLDESAINEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEE 60
           MDRSAN+S+S YEND GLLDES+  EE QQRKPVWVDEEEEKA+VNITNVSRLRKLRKEE
Sbjct: 107 MDRSANNSLSVYENDVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEE 166

Query: 61  DENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGS-DDDDLSSDDENGVVLADGYDN 120
           DE SISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGS DDDDLSSDDEN V LADGYDN
Sbjct: 167 DEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLSSDDENAVALADGYDN 226

Query: 121 VDSIDDILRTSENLVVKSGAKLLPGLLEYSRLVDANAEEPSNGPINSVQFHRNAQLLLAT 180
           VDSIDDILRT+ENLV KSGAKLLPGLLEYSRLVDANA+EPSNGPI+SVQFHRNAQLLLAT
Sbjct: 227 VDSIDDILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLAT 286

Query: 181 GLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKV 240
           GLDR+LRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVII+GRRKFFYSLDLVKAKV
Sbjct: 287 GLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKV 346

Query: 241 DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF 300
           DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF
Sbjct: 347 DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF 406

Query: 301 ADEGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSSNGALFAAGSDSGIVN 360
           AD+G+QLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTS NGALFAAGSDSGIVN
Sbjct: 407 ADDGQQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVN 466

Query: 361 IYNRQEFLGGKR 372
           IYNRQEFLGGK+
Sbjct: 467 IYNRQEFLGGKK 478

[Close]

BLAST of Lag0033290 vs. NCBI nr
Match: KAG7011246.1 (U3 small nucleolar RNA-associated protein 18-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 684.1 bits (1764), Expect = 6.7e-193
Identity = 348/372 (93.55%), Postives = 361/372 (97.04%), Query Frame = 0


Query: 1   MDRSANSSISAYENDFGLLDESAINEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEE 60
           MDRSAN+S+S YEND GLLDES+I EE QQRKPVWVDEEEEKA+VNITNVSRLRKLRKEE
Sbjct: 234 MDRSANNSLSVYENDVGLLDESSIKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEE 293

Query: 61  DENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGS-DDDDLSSDDENGVVLADGYDN 120
           DE SISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGS DDDDL+SDDEN V LADGYDN
Sbjct: 294 DEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDN 353

Query: 121 VDSIDDILRTSENLVVKSGAKLLPGLLEYSRLVDANAEEPSNGPINSVQFHRNAQLLLAT 180
           VDSIDDILRT+ENLV KSGAKLLPGLLEYSRLVDANA+EP+NGPI+SVQFHRNAQLLLAT
Sbjct: 354 VDSIDDILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPANGPIHSVQFHRNAQLLLAT 413

Query: 181 GLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKV 240
           GLDR+LRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVII+GRR+FFYSLDLVKAKV
Sbjct: 414 GLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKV 473

Query: 241 DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF 300
           DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF
Sbjct: 474 DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF 533

Query: 301 ADEGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSSNGALFAAGSDSGIVN 360
           AD GRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTS NGALFAAGSDSGIVN
Sbjct: 534 ADNGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVN 593

Query: 361 IYNRQEFLGGKR 372
           IYNRQEFLGGK+
Sbjct: 594 IYNRQEFLGGKK 605

[Close]

BLAST of Lag0033290 vs. NCBI nr
Match: XP_022967509.1 (U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita maxima])

HSP 1 Score: 683.7 bits (1763), Expect = 8.8e-193
Identity = 349/372 (93.82%), Postives = 360/372 (96.77%), Query Frame = 0


Query: 1   MDRSANSSISAYENDFGLLDESAINEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEE 60
           MDRSAN+S+S YEND GLLDES+  EE QQRKPVWVDEEEEKA+VNITNVSRLRKLRKEE
Sbjct: 107 MDRSANNSLSVYENDVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEE 166

Query: 61  DENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGS-DDDDLSSDDENGVVLADGYDN 120
           DE SISGSEYVSRLRAQHAKLNPGTEWAQLDAQSR GS DDDDLSSDDEN V LADGYDN
Sbjct: 167 DEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDN 226

Query: 121 VDSIDDILRTSENLVVKSGAKLLPGLLEYSRLVDANAEEPSNGPINSVQFHRNAQLLLAT 180
           VDSIDDILRT+ENLV KSGAKLLPGLLEYSRLVDANA+EPSNGPI+SVQFHRNAQLLLAT
Sbjct: 227 VDSIDDILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLAT 286

Query: 181 GLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKV 240
           GLDR+LRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVII+GRRKFFYSLDLVKAKV
Sbjct: 287 GLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKV 346

Query: 241 DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF 300
           DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF
Sbjct: 347 DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF 406

Query: 301 ADEGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSSNGALFAAGSDSGIVN 360
           AD+GRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTS NGALFAAGSDSGIVN
Sbjct: 407 ADDGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVN 466

Query: 361 IYNRQEFLGGKR 372
           IYNRQEFLGGK+
Sbjct: 467 IYNRQEFLGGKK 478

[Close]

BLAST of Lag0033290 vs. NCBI nr
Match: KAG6571483.1 (U3 small nucleolar RNA-associated protein 18-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 682.6 bits (1760), Expect = 2.0e-192
Identity = 348/372 (93.55%), Postives = 360/372 (96.77%), Query Frame = 0


Query: 1   MDRSANSSISAYENDFGLLDESAINEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEE 60
           MDRSAN+S+S YEND GLLDES+  EE QQRKPVWVDEEEEKA+VNITNVSRLRKLRKEE
Sbjct: 302 MDRSANNSLSVYENDVGLLDESSNKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEE 361

Query: 61  DENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGS-DDDDLSSDDENGVVLADGYDN 120
           DE SISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGS DDDDL+SDDEN V LADGYDN
Sbjct: 362 DEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDN 421

Query: 121 VDSIDDILRTSENLVVKSGAKLLPGLLEYSRLVDANAEEPSNGPINSVQFHRNAQLLLAT 180
           VDSIDDILRT+ENLV KSGAKLLPGLLEYSRLVDANA+EPSNGPI+SVQFHRNAQLLLAT
Sbjct: 422 VDSIDDILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLAT 481

Query: 181 GLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKV 240
           GLDR+LRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVII+GRR+FFYSLDLVKAKV
Sbjct: 482 GLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKV 541

Query: 241 DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF 300
           DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF
Sbjct: 542 DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF 601

Query: 301 ADEGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSSNGALFAAGSDSGIVN 360
           AD GRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTS NGALFAAGSDSGIVN
Sbjct: 602 ADNGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVN 661

Query: 361 IYNRQEFLGGKR 372
           IYNRQEFLGGK+
Sbjct: 662 IYNRQEFLGGKK 673

[Close]

BLAST of Lag0033290 vs. ExPASy Swiss-Prot
Match: Q9FMU5 (U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana OX=3702 GN=At5g14050 PE=1 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 1.5e-134
Identity = 257/378 (67.99%), Postives = 300/378 (79.37%), Query Frame = 0


Query: 1   MDRSANSSISAYENDFGLLDESAINEEPQQ------RKPVWVDEEEEKATVNITNVSRLR 60
           +DRSA   I  YE+D G  DE   +EE  Q       +  W DEEE++  V+I +V+RLR
Sbjct: 91  VDRSAVRQIPDYEDD-GDDDEELSDEENGQVVAIRKGEAAWEDEEEKQINVDIASVNRLR 150

Query: 61  KLRKEEDENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDLSSDDENGVVLA 120
           KLRKEE+E  ISGSEY++RLRA HAKLNPGT+WA+ D+Q   G   DD   D ++G    
Sbjct: 151 KLRKEENEGLISGSEYIARLRAHHAKLNPGTDWARPDSQIVDGESSDD--DDTQDG---- 210

Query: 121 DGYDNVDSIDDILRTSENLVVKS-GAKLLPGLLEYSRLVDANAEEPSNGPINSVQFHRNA 180
                   +DDILRT+E+LVVKS G KL  G LEYS+LVDANA +PSNGPINSV FH+NA
Sbjct: 211 -------GVDDILRTNEDLVVKSRGNKLCAGRLEYSKLVDANAADPSNGPINSVHFHQNA 270

Query: 181 QLLLATGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLD 240
           QLLL  GLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKA+FLP+GSQVI++GRRKFFYS D
Sbjct: 271 QLLLTAGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPNGSQVIVSGRRKFFYSFD 330

Query: 241 LVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGT 300
           L KAK DKIGPLVGREEKSLE FEVS DS+T+AF+GNEGYILLVSTKTKELIGTLKMNG+
Sbjct: 331 LEKAKFDKIGPLVGREEKSLEYFEVSQDSNTIAFVGNEGYILLVSTKTKELIGTLKMNGS 390

Query: 301 VRSLAFADEGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSSNGALFAAGS 360
           VRSLAF+++G+ LLSSGGDGQVY WDLRT  C++K VDEG   GT+LC+S NGALFA+G+
Sbjct: 391 VRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGTSLCSSLNGALFASGT 450

Query: 361 DSGIVNIYNRQEFLGGKR 372
           D GIVNIY + EF+GGKR
Sbjct: 451 DRGIVNIYKKSEFVGGKR 454

[Close]

BLAST of Lag0033290 vs. ExPASy Swiss-Prot
Match: Q9Y5J1 (U3 small nucleolar RNA-associated protein 18 homolog OS=Homo sapiens OX=9606 GN=UTP18 PE=1 SV=3)

HSP 1 Score: 219.5 bits (558), Expect = 6.2e-56
Identity = 131/353 (37.11%), Postives = 200/353 (56.66%), Query Frame = 0


Query: 19  LDESAINEEPQQRKPVWVDEE-EEKATVNITNVSRLRKLRKEEDENSISGSEYVSRLRA- 78
           ++  A    P Q+KPVWVDEE E++  V++ N    + + K   E+ +S      RL+  
Sbjct: 126 VENEAKGNFPPQKKPVWVDEEDEDEEMVDMMNNRFRKDMMKNASESKLSKDNLKKRLKEE 185

Query: 79  -QHAKLNPGTEWAQLDAQSRGGSDDDDLSSDDENGVVLADGYDNVDSIDDILRTSENLVV 138
            QHA +     WA+    ++  +  DD S +DE               DD+L+ + N  +
Sbjct: 186 FQHA-MGGVPAWAE---TTKRKTSSDDESEEDE---------------DDLLQRTGNF-I 245

Query: 139 KSGAKLLPGLLEYSRLVDANAEEPSNGPINSVQFHRNAQLLLATGLDRRLRFFQIDGKRN 198
            +   L  G+L+      ANAE P+   I+SVQFH  AQ+++  GLD  +  FQ+DGK N
Sbjct: 246 STSTSLPRGILKMKNCQHANAERPTVARISSVQFHPGAQIVMVAGLDNAVSLFQVDGKTN 305

Query: 199 TKIQSIFLEDCPIRKASFLPDGSQVIIAG-RRKFFYSLDLVKAKVDKIGPLVGREEKSLE 258
            KIQSI+LE  PI KA F  +G +V+      K  Y  D++  K+  +  + G +EK + 
Sbjct: 306 PKIQSIYLERFPIFKACFSANGEEVLATSTHSKVLYVYDMLAGKLIPVHQVRGLKEKIVR 365

Query: 259 VFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADEGRQLLSSGGDGQ 318
            FEVSPD S +   G  GY+ L++ KTKELIG++K+NG V +  F+ + +++ +S GDG+
Sbjct: 366 SFEVSPDGSFLLINGIAGYLHLLAMKTKELIGSMKINGRVAASTFSSDSKKVYASSGDGE 425

Query: 319 VYHWDLRTRTCIHKAVDEGCINGTALCTSSNGALFAAGSDSGIVNIYNRQEFL 368
           VY WD+ +R C+++ VDEG + G ++ TS NG   A GS+ G+VNIYN+   L
Sbjct: 426 VYVWDVNSRKCLNRFVDEGSLYGLSIATSRNGQYVACGSNCGVVNIYNQDSCL 458

[Close]

BLAST of Lag0033290 vs. ExPASy Swiss-Prot
Match: Q5SSI6 (U3 small nucleolar RNA-associated protein 18 homolog OS=Mus musculus OX=10090 GN=Utp18 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.2e-54
Identity = 128/361 (35.46%), Postives = 206/361 (57.06%), Query Frame = 0


Query: 17  GLLDESAINEE------PQQRKPVWVDEEEEKATVNITNVSRLRK-LRKEEDENSISGSE 76
           G  DES +  E       ++++PVWVDE++E   +   + +R RK + K   E+ +S  +
Sbjct: 113 GSSDESEVENEAKDIFSQKKKQPVWVDEDDEDEEIVDMSNNRFRKDIMKNASESKLSKDK 172

Query: 77  YVSRLRA--QHAKLNPGTEWAQLDAQSRGGSDDDDLSSDDENGVVLADGYDNVDSIDDIL 136
              RL+   QHA +    +WA+  ++ R  SDD+  S +DE               DD+L
Sbjct: 173 LQKRLKEEFQHA-MGGVPDWAEAGSKRRTSSDDE--SEEDE---------------DDLL 232

Query: 137 RTSENLVVKSGAKLLPGLLEYSRLVDANAEEPSNGPINSVQFHRNAQLLLATGLDRRLRF 196
           + + N  + +   L  G+L+      ANAE P+   I+SVQFH  AQ+++ +G+D  +  
Sbjct: 233 QRTGNF-ISTSTSLPRGILKMKNCRPANAERPTTARISSVQFHPGAQVVMVSGVDNAISL 292

Query: 197 FQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAG-RRKFFYSLDLVKAKVDKIGPLV 256
           FQ+DGK N KIQSI+LE  PI KA F  +G +V+      K  Y  D++  K+  +  + 
Sbjct: 293 FQVDGKTNPKIQSIYLEKFPIFKACFSANGEEVLATSMHSKVLYVYDMLAGKLIPVHQVR 352

Query: 257 GREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADEGRQL 316
           G +EK+++ FEVSPD S +   G  G+  L+S KTKELIG++K+NG + +  F+ + +++
Sbjct: 353 GLKEKTVKQFEVSPDGSFLLISGIAGFSHLLSMKTKELIGSMKINGRIAASTFSSDSKRI 412

Query: 317 LSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSSNGALFAAGSDSGIVNIYNRQEF 368
            +   +G+VY WD+ +R C+++ +DEG + G ++  S NG   A GS SG+VNIYN+   
Sbjct: 413 YTYSENGEVYVWDVNSRKCMNRFLDEGSLCGLSIAASKNGQYVACGSKSGVVNIYNQDSC 454

[Close]

BLAST of Lag0033290 vs. ExPASy Swiss-Prot
Match: P78750 (Probable U3 small nucleolar RNA-associated protein 18 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC29A3.06 PE=2 SV=3)

HSP 1 Score: 196.4 bits (498), Expect = 5.6e-49
Identity = 114/347 (32.85%), Postives = 186/347 (53.60%), Query Frame = 0


Query: 20  DESAINEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEEDENSISGSEYVSRLRAQHA 79
           DE A NE P     +W D ++E+  +++ + SRLRKLR+ EDE+ ++G +Y  RLR Q  
Sbjct: 90  DEEASNEIPS----IWEDSDDERLMISLQDHSRLRKLRQYEDEDMVNGLQYARRLRTQFE 149

Query: 80  KLNPGTEWAQLDAQSRGGSDDDDLSSDDENGVVLADGYDNVDSIDDILRTSENLVVKSGA 139
           ++ P  EWA+    +    ++D+ ++  E  V+         S+  + ++S + + +S  
Sbjct: 150 RVYPVPEWAKKQDVT---EEEDEFNALSEKSVI-------PKSLKSLFKSSVSYINQSSK 209

Query: 140 KLLPGLLEYSRLVDANAEEPSNGPINSVQFHRNAQLLLATGLDRRLRFFQIDGKRNTKIQ 199
            L PG +   RL DAN + PS+  I  +  H    LLL  G DR LR +Q+DGK N  + 
Sbjct: 210 LLAPGTINIKRLKDANFQAPSHSGIRCMSIHPYFPLLLTCGFDRTLRIYQLDGKVNPLVT 269

Query: 200 SIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVGRE--EKSLEVFE 259
           S+ L    ++ A F PDG +VI AGRRK+ Y  DL  A+V K+  + G+E  + S+E F 
Sbjct: 270 SLHLRSSALQTALFHPDGKRVIAAGRRKYMYIWDLESAQVQKVSRMYGQENFQPSMERFH 329

Query: 260 VSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADEGRQLLSSGGDGQVYH 319
           V P    +A  G  G+I L+   T +   + K+ G +  + F  +G ++L      +V+H
Sbjct: 330 VDPTGKYIALEGRSGHINLLHALTGQFATSFKIEGVLSDVLFTSDGSEMLVLSYGAEVWH 389

Query: 320 WDLRTRTCIHKAVDEGCINGTALCTSSNGALFAAGSDSGIVNIYNRQ 365
           +++  R+ + +   +  ++ T  C   +    A GS SGIVNIY+ Q
Sbjct: 390 FNVEQRSVVRRWQVQDGVSTTHFCLDPSNKYLAIGSKSGIVNIYDLQ 422

[Close]

BLAST of Lag0033290 vs. ExPASy Swiss-Prot
Match: Q9V7P1 (U3 small nucleolar RNA-associated protein 18 homolog OS=Drosophila melanogaster OX=7227 GN=wcd PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.3e-29
Identity = 100/363 (27.55%), Postives = 164/363 (45.18%), Query Frame = 0


Query: 20  DESAINEEPQQRKP------VWVDEEEEKATVN-----ITNVSRLRKLRKEEDENSISGS 79
           DE    E P Q KP       W D ++E   V        +   L  LRK++        
Sbjct: 80  DEDEQEENPGQAKPGDKRKAAWSDSDDEDLQVGDVKKATKHTGPLNHLRKDK-------- 139

Query: 80  EYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDLSSDDENGVVLADGYDNVDSIDDILR 139
            Y   L A+  +     +WA+   ++    DD+D+SSD+E                 +LR
Sbjct: 140 SYKEYLTARFQRTLNQPKWAEKKVKN---EDDEDVSSDEE-----------------LLR 199

Query: 140 TSENLVVKSGAKLLP-GLLEYSRLVDANAEEPSNGPINSVQFHRNAQLLLATGLDRRLRF 199
           T   +  K+    LP   L + R+ D N    + G   S+QFH  +   L  G++     
Sbjct: 200 TVGFIDRKARNSDLPQKTLNFKRVKDLNRATYAEGNATSIQFHPTSTAALVAGMNGLATI 259

Query: 200 FQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVDKIGPLVG 259
           + +DG++N ++ ++  +  P+  +   P G++      + F+YS DL++AK  K+  L G
Sbjct: 260 YAVDGQKNERLHNMRFKKFPLACSRIAPCGTRAFFGSVKPFYYSYDLLEAKESKL-KLPG 319

Query: 260 REEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFADEGRQLL 319
             E  +  FEVSP    +   G  G I L++ KT EL+ + K  G V+   ++ + +++L
Sbjct: 320 AME-FMHRFEVSPCGKFIVTAGKFGAIHLLTAKTNELLHSFKQEGKVKGFTWSSDSKRIL 379

Query: 320 SSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSSNGALFAAGSDSGIVNIYNRQEFL 371
             G    V   +LR     H  +D+GCI+G ++  S N  L A GS  G+VNIY+ +   
Sbjct: 380 VCGSTSNVSVLNLRQNLIEHIFMDDGCIHGESIQLSPNQRLLATGSQEGVVNIYDYESIF 412

[Close]

BLAST of Lag0033290 vs. ExPASy TrEMBL
Match: A0A6J1HKC7 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita moschata OX=3662 GN=LOC111463814 PE=4 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 2.5e-193
Identity = 349/372 (93.82%), Postives = 361/372 (97.04%), Query Frame = 0


Query: 1   MDRSANSSISAYENDFGLLDESAINEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEE 60
           MDRSAN+S+S YEND GLLDES+  EE QQRKPVWVDEEEEKA+VNITNVSRLRKLRKEE
Sbjct: 107 MDRSANNSLSVYENDVGLLDESSNKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEE 166

Query: 61  DENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGS-DDDDLSSDDENGVVLADGYDN 120
           DE SISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGS DDDDL+SDDEN V LADGYDN
Sbjct: 167 DEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDDLTSDDENAVALADGYDN 226

Query: 121 VDSIDDILRTSENLVVKSGAKLLPGLLEYSRLVDANAEEPSNGPINSVQFHRNAQLLLAT 180
           VDSIDDILRT+ENLV KSGAKLLPGLLEYSRLVDANA+EPSNGPI+SVQFHRNAQLLLAT
Sbjct: 227 VDSIDDILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLAT 286

Query: 181 GLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKV 240
           GLDR+LRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVII+GRRKFFYSLDLVKAKV
Sbjct: 287 GLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKV 346

Query: 241 DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF 300
           DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF
Sbjct: 347 DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF 406

Query: 301 ADEGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSSNGALFAAGSDSGIVN 360
           AD+GRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTS NGALFAAGSDSGIVN
Sbjct: 407 ADDGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVN 466

Query: 361 IYNRQEFLGGKR 372
           IYNRQEFLGGK+
Sbjct: 467 IYNRQEFLGGKK 478

[Close]

BLAST of Lag0033290 vs. ExPASy TrEMBL
Match: A0A6J1HWX2 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita maxima OX=3661 GN=LOC111466993 PE=4 SV=1)

HSP 1 Score: 683.7 bits (1763), Expect = 4.3e-193
Identity = 349/372 (93.82%), Postives = 360/372 (96.77%), Query Frame = 0


Query: 1   MDRSANSSISAYENDFGLLDESAINEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEE 60
           MDRSAN+S+S YEND GLLDES+  EE QQRKPVWVDEEEEKA+VNITNVSRLRKLRKEE
Sbjct: 107 MDRSANNSLSVYENDVGLLDESSSKEEAQQRKPVWVDEEEEKASVNITNVSRLRKLRKEE 166

Query: 61  DENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGS-DDDDLSSDDENGVVLADGYDN 120
           DE SISGSEYVSRLRAQHAKLNPGTEWAQLDAQSR GS DDDDLSSDDEN V LADGYDN
Sbjct: 167 DEKSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRSGSDDDDDLSSDDENAVALADGYDN 226

Query: 121 VDSIDDILRTSENLVVKSGAKLLPGLLEYSRLVDANAEEPSNGPINSVQFHRNAQLLLAT 180
           VDSIDDILRT+ENLV KSGAKLLPGLLEYSRLVDANA+EPSNGPI+SVQFHRNAQLLLAT
Sbjct: 227 VDSIDDILRTNENLVAKSGAKLLPGLLEYSRLVDANAQEPSNGPIHSVQFHRNAQLLLAT 286

Query: 181 GLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKV 240
           GLDR+LRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVII+GRRKFFYSLDLVKAKV
Sbjct: 287 GLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRKFFYSLDLVKAKV 346

Query: 241 DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF 300
           DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF
Sbjct: 347 DKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF 406

Query: 301 ADEGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSSNGALFAAGSDSGIVN 360
           AD+GRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTS NGALFAAGSDSGIVN
Sbjct: 407 ADDGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGALFAAGSDSGIVN 466

Query: 361 IYNRQEFLGGKR 372
           IYNRQEFLGGK+
Sbjct: 467 IYNRQEFLGGKK 478

[Close]

BLAST of Lag0033290 vs. ExPASy TrEMBL
Match: A0A6J1CYH1 (U3 small nucleolar RNA-associated protein 18 homolog OS=Momordica charantia OX=3673 GN=LOC111015623 PE=4 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 1.2e-192
Identity = 348/373 (93.30%), Postives = 363/373 (97.32%), Query Frame = 0


Query: 1   MDRSANSSISAYENDFGLL--DESAINEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRK 60
           MDRSA SS+SAYE+DF L+  DES   EEPQQRKPVWVDEEEEKATVNI+NVSRLRKLRK
Sbjct: 97  MDRSAXSSLSAYEDDFRLVDEDESTNKEEPQQRKPVWVDEEEEKATVNISNVSRLRKLRK 156

Query: 61  EEDENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDLSSDDENGVVLADGYD 120
           EEDE+SISGSEYV+RLRAQHAKLNPGTEWAQLD+QS+GGS+DD LSSDDENGVVLADGY+
Sbjct: 157 EEDESSISGSEYVTRLRAQHAKLNPGTEWAQLDSQSKGGSEDDALSSDDENGVVLADGYE 216

Query: 121 NVDSIDDILRTSENLVVKSGAKLLPGLLEYSRLVDANAEEPSNGPINSVQFHRNAQLLLA 180
           NVDSIDDILRTSENLVVK GAKLLPGLLEYSRLVDANAEEPSNGPINSVQFHRNAQLLLA
Sbjct: 217 NVDSIDDILRTSENLVVKRGAKLLPGLLEYSRLVDANAEEPSNGPINSVQFHRNAQLLLA 276

Query: 181 TGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAK 240
           TGLDRRLRFFQIDGKRNTKIQSIFLEDCP+RKASFLPDGSQVIIAGRRKFFYSLDLVKAK
Sbjct: 277 TGLDRRLRFFQIDGKRNTKIQSIFLEDCPVRKASFLPDGSQVIIAGRRKFFYSLDLVKAK 336

Query: 241 VDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLA 300
           VDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNG+VRSLA
Sbjct: 337 VDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGSVRSLA 396

Query: 301 FADEGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSSNGALFAAGSDSGIV 360
           FAD+GRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTS NG+LFAAGSDSGIV
Sbjct: 397 FADDGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSPNGSLFAAGSDSGIV 456

Query: 361 NIYNRQEFLGGKR 372
           NIYNRQEFLGGK+
Sbjct: 457 NIYNRQEFLGGKK 469

[Close]

BLAST of Lag0033290 vs. ExPASy TrEMBL
Match: A0A6J1ET16 (U3 small nucleolar RNA-associated protein 18 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437464 PE=4 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 1.4e-191
Identity = 344/371 (92.72%), Postives = 355/371 (95.69%), Query Frame = 0


Query: 1   MDRSANSSISAYENDFGLLDESAINEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEE 60
           MDRSANSS+SAYE DFGLLDES   EEPQQRKPVW+DEEEEKATVNITNVSRLRKLRKEE
Sbjct: 108 MDRSANSSLSAYEGDFGLLDESVNEEEPQQRKPVWIDEEEEKATVNITNVSRLRKLRKEE 167

Query: 61  DENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDLSSDDENGVVLADGYDNV 120
           DE SISGSEYVSRLRAQHAKLNP TEWAQLD Q+RGGSDDDDLSSDDEN VV+ADGYD+V
Sbjct: 168 DEKSISGSEYVSRLRAQHAKLNPSTEWAQLDVQTRGGSDDDDLSSDDENAVVMADGYDDV 227

Query: 121 DSIDDILRTSENLVVKSGAKLLPGLLEYSRLVDANAEEPSNGPINSVQFHRNAQLLLATG 180
           DSIDDILRTS+NLV KSG KLLPGLLEYSRLVDANAEEPSNGPI+SVQFHRNAQLLLATG
Sbjct: 228 DSIDDILRTSDNLVEKSGGKLLPGLLEYSRLVDANAEEPSNGPIHSVQFHRNAQLLLATG 287

Query: 181 LDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVD 240
           LDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVII+GRR+FFYS DLVKAKVD
Sbjct: 288 LDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSFDLVKAKVD 347

Query: 241 KIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFA 300
           KIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF 
Sbjct: 348 KIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFT 407

Query: 301 DEGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSSNGALFAAGSDSGIVNI 360
           D GRQLLSSGGDGQVYHWDLRTRTCIHK VDEGCINGTAL TS NGALFAAGSDSGIVNI
Sbjct: 408 DNGRQLLSSGGDGQVYHWDLRTRTCIHKGVDEGCINGTALGTSPNGALFAAGSDSGIVNI 467

Query: 361 YNRQEFLGGKR 372
           YNR+EFLGGK+
Sbjct: 468 YNREEFLGGKK 478

[Close]

BLAST of Lag0033290 vs. ExPASy TrEMBL
Match: A0A6J1K5W3 (U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490998 PE=4 SV=1)

HSP 1 Score: 672.9 bits (1735), Expect = 7.5e-190
Identity = 342/371 (92.18%), Postives = 354/371 (95.42%), Query Frame = 0


Query: 1   MDRSANSSISAYENDFGLLDESAINEEPQQRKPVWVDEEEEKATVNITNVSRLRKLRKEE 60
           MDRSANSS+SAYE DFGLLDES   EEPQQRKPVW+DEEEEKATVNITNVSRLRKLRKEE
Sbjct: 108 MDRSANSSLSAYEGDFGLLDESVNEEEPQQRKPVWIDEEEEKATVNITNVSRLRKLRKEE 167

Query: 61  DENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDLSSDDENGVVLADGYDNV 120
           DE SISGSEYVSRLRAQHAKLNP TEWAQLD Q+ GGSDDDDLSSDDEN VV+ADG+D+V
Sbjct: 168 DEKSISGSEYVSRLRAQHAKLNPSTEWAQLDVQTSGGSDDDDLSSDDENAVVMADGHDDV 227

Query: 121 DSIDDILRTSENLVVKSGAKLLPGLLEYSRLVDANAEEPSNGPINSVQFHRNAQLLLATG 180
           DSIDDILRTS+NLV KSG KLLPGLLEYSRLVDANAEEPSNGPI+SVQFHRNAQLLLATG
Sbjct: 228 DSIDDILRTSDNLVEKSGGKLLPGLLEYSRLVDANAEEPSNGPIHSVQFHRNAQLLLATG 287

Query: 181 LDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLDLVKAKVD 240
           LDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVII+GRR+FFYSLDLVKAKVD
Sbjct: 288 LDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIISGRRRFFYSLDLVKAKVD 347

Query: 241 KIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFA 300
           KIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAF 
Sbjct: 348 KIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGTVRSLAFT 407

Query: 301 DEGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSSNGALFAAGSDSGIVNI 360
           D G QLLSSGGDGQVYHWDLRTRTCIHK VDEGCINGTAL TS NGALFAAGSDSGIVNI
Sbjct: 408 DNGFQLLSSGGDGQVYHWDLRTRTCIHKGVDEGCINGTALGTSPNGALFAAGSDSGIVNI 467

Query: 361 YNRQEFLGGKR 372
           YNR+EFLGGK+
Sbjct: 468 YNREEFLGGKK 478

[Close]

BLAST of Lag0033290 vs. TAIR 10
Match: AT5G14050.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 480.7 bits (1236), Expect = 1.1e-135
Identity = 257/378 (67.99%), Postives = 300/378 (79.37%), Query Frame = 0


Query: 1   MDRSANSSISAYENDFGLLDESAINEEPQQ------RKPVWVDEEEEKATVNITNVSRLR 60
           +DRSA   I  YE+D G  DE   +EE  Q       +  W DEEE++  V+I +V+RLR
Sbjct: 91  VDRSAVRQIPDYEDD-GDDDEELSDEENGQVVAIRKGEAAWEDEEEKQINVDIASVNRLR 150

Query: 61  KLRKEEDENSISGSEYVSRLRAQHAKLNPGTEWAQLDAQSRGGSDDDDLSSDDENGVVLA 120
           KLRKEE+E  ISGSEY++RLRA HAKLNPGT+WA+ D+Q   G   DD   D ++G    
Sbjct: 151 KLRKEENEGLISGSEYIARLRAHHAKLNPGTDWARPDSQIVDGESSDD--DDTQDG---- 210

Query: 121 DGYDNVDSIDDILRTSENLVVKS-GAKLLPGLLEYSRLVDANAEEPSNGPINSVQFHRNA 180
                   +DDILRT+E+LVVKS G KL  G LEYS+LVDANA +PSNGPINSV FH+NA
Sbjct: 211 -------GVDDILRTNEDLVVKSRGNKLCAGRLEYSKLVDANAADPSNGPINSVHFHQNA 270

Query: 181 QLLLATGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIAGRRKFFYSLD 240
           QLLL  GLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKA+FLP+GSQVI++GRRKFFYS D
Sbjct: 271 QLLLTAGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKAAFLPNGSQVIVSGRRKFFYSFD 330

Query: 241 LVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVSTKTKELIGTLKMNGT 300
           L KAK DKIGPLVGREEKSLE FEVS DS+T+AF+GNEGYILLVSTKTKELIGTLKMNG+
Sbjct: 331 LEKAKFDKIGPLVGREEKSLEYFEVSQDSNTIAFVGNEGYILLVSTKTKELIGTLKMNGS 390

Query: 301 VRSLAFADEGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCTSSNGALFAAGS 360
           VRSLAF+++G+ LLSSGGDGQVY WDLRT  C++K VDEG   GT+LC+S NGALFA+G+
Sbjct: 391 VRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGTSLCSSLNGALFASGT 450

Query: 361 DSGIVNIYNRQEFLGGKR 372
           D GIVNIY + EF+GGKR
Sbjct: 451 DRGIVNIYKKSEFVGGKR 454

[Close]

BLAST of Lag0033290 vs. TAIR 10
Match: AT1G15440.1 (periodic tryptophan protein 2 )

HSP 1 Score: 43.1 bits (100), Expect = 5.6e-04
Identity = 43/194 (22.16%), Postives = 77/194 (39.69%), Query Frame = 0


Query: 164 INSVQFHRNAQLLLATGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIA 223
           + ++ F  +   LL+  LD  +R +     +N K    +    P +  S   D S  ++ 
Sbjct: 434 VTALHFMADNHSLLSASLDGTVRAWDFKRYKNYK---TYTTPTPRQFVSLTADPSGDVVC 493

Query: 224 GRRKFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVST-KTK 283
                 + + +   K  +I  ++   E  +     SP +  +A    +  + L     +K
Sbjct: 494 AGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASK 553

Query: 284 ELIGTLKMNGTVRSLAFADEGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCT 343
             + T + N  V ++AF  +G+QL SS  DGQ+  WD      ++       I G  + T
Sbjct: 554 GTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGRRDIAGGRVMT 613

Query: 344 SSNGALFAAGSDSG 357
                  AA S SG
Sbjct: 614 DRRS---AANSSSG 621

[Close]

BLAST of Lag0033290 vs. TAIR 10
Match: AT1G15440.2 (periodic tryptophan protein 2 )

HSP 1 Score: 43.1 bits (100), Expect = 5.6e-04
Identity = 43/194 (22.16%), Postives = 77/194 (39.69%), Query Frame = 0


Query: 164 INSVQFHRNAQLLLATGLDRRLRFFQIDGKRNTKIQSIFLEDCPIRKASFLPDGSQVIIA 223
           + ++ F  +   LL+  LD  +R +     +N K    +    P +  S   D S  ++ 
Sbjct: 394 VTALHFMADNHSLLSASLDGTVRAWDFKRYKNYK---TYTTPTPRQFVSLTADPSGDVVC 453

Query: 224 GRRKFFYSLDLVKAKVDKIGPLVGREEKSLEVFEVSPDSSTVAFIGNEGYILLVST-KTK 283
                 + + +   K  +I  ++   E  +     SP +  +A    +  + L     +K
Sbjct: 454 AGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASK 513

Query: 284 ELIGTLKMNGTVRSLAFADEGRQLLSSGGDGQVYHWDLRTRTCIHKAVDEGCINGTALCT 343
             + T + N  V ++AF  +G+QL SS  DGQ+  WD      ++       I G  + T
Sbjct: 514 GTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGRRDIAGGRVMT 573

Query: 344 SSNGALFAAGSDSG 357
                  AA S SG
Sbjct: 574 DRRS---AANSSSG 581

The following BLAST results are available for this feature:

BLAST of Lag0033290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963504.1	5.2e-193	93.82	U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita moschata]	[more]
XP_023511721.1	5.2e-193	93.82	U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita pepo subsp. pepo...	[more]
KAG7011246.1	6.7e-193	93.55	U3 small nucleolar RNA-associated protein 18-like protein, partial [Cucurbita ar...	[more]
XP_022967509.1	8.8e-193	93.82	U3 small nucleolar RNA-associated protein 18 homolog [Cucurbita maxima]	[more]
KAG6571483.1	2.0e-192	93.55	U3 small nucleolar RNA-associated protein 18-like protein, partial [Cucurbita ar...	[more]

BLAST of Lag0033290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMU5	1.5e-134	67.99	U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana OX=...	[more]
Q9Y5J1	6.2e-56	37.11	U3 small nucleolar RNA-associated protein 18 homolog OS=Homo sapiens OX=9606 GN=...	[more]
Q5SSI6	1.2e-54	35.46	U3 small nucleolar RNA-associated protein 18 homolog OS=Mus musculus OX=10090 GN...	[more]
P78750	5.6e-49	32.85	Probable U3 small nucleolar RNA-associated protein 18 OS=Schizosaccharomyces pom...	[more]
Q9V7P1	1.3e-29	27.55	U3 small nucleolar RNA-associated protein 18 homolog OS=Drosophila melanogaster ...	[more]

BLAST of Lag0033290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HKC7	2.5e-193	93.82	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita moschata OX=36...	[more]
A0A6J1HWX2	4.3e-193	93.82	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita maxima OX=3661...	[more]
A0A6J1CYH1	1.2e-192	93.30	U3 small nucleolar RNA-associated protein 18 homolog OS=Momordica charantia OX=3...	[more]
A0A6J1ET16	1.4e-191	92.72	U3 small nucleolar RNA-associated protein 18 homolog isoform X1 OS=Cucurbita mos...	[more]
A0A6J1K5W3	7.5e-190	92.18	U3 small nucleolar RNA-associated protein 18 homolog OS=Cucurbita maxima OX=3661...	[more]

BLAST of Lag0033290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14050.1	1.1e-135	67.99	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G15440.1	5.6e-04	22.16	periodic tryptophan protein 2	[more]
AT1G15440.2	5.6e-04	22.16	periodic tryptophan protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 149..189 e-value: 4.5 score: 12.9 coord: 322..362 e-value: 4.8 score: 12.7 coord: 281..319 e-value: 7.5E-6 score: 35.4
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 335..362 e-value: 0.13 score: 13.2 coord: 285..319 e-value: 0.022 score: 15.6
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 287..328 score: 11.210233
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 139..373 e-value: 3.1E-73 score: 248.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR18359:SF0	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 18 HOMOLOG	coord: 20..370
None	No IPR available	PANTHER	PTHR18359	WD-REPEAT PROTEIN-RELATED	coord: 20..370
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 287..322 score: 8.729241
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 160..364

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0033290.1	Lag0033290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0034388	Pwp2p-containing subcomplex of 90S preribosome
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0005515	protein binding