Lag0033244 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0033244
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like
Location	chr11: 42060851 .. 42061405 (-)
RNA-Seq Expression	Lag0033244
Synteny	Lag0033244

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCAATCCCTGAATTTGAAGGTCTCAACACCCAACAATTTGGGAGCTCAAATGTTCAAAATTTAGCTGTTGGGTCATCTTCTTCTTCTTCTTCTTCAAACAGCCGTTATGAGAACCAAAAACGGCGAGATTGGAACACATTTTGTCAATACCTTAAAAACCACCGACCGCCACTTGCTCTGTCGAGGTGTAGTGGAGCTCATGTTCTTGAATTCCTTCGGTATTTGGACCAATTTGGAAAGACCAAAGTCCACACTCCGATCTGCCCTTTCTACGGGCACCCCAACCCTCCAGCGCCATGTCCCTGCCCTCTACGCCAAGCTTGGGGCAGCCTCGATGCCCTTATTGGCCGCCTTAGGGCAGCCTTCGAAGAGAACGGTGGGATGCCCGAAGCTAACCCTTTTGGTGCCCGAGCTGTGAGGCTTTATCTTCGAGAGGTTCGTGATTTGCAGTCAAAAGCAAGAGGAATTAGCTATGAGAAGAAGAAACGAAAGCGCCCTCAACAACAACAACAACAGATCATTTCTCAACAGCCTCCCACAGGAGCTTAA

mRNA sequence

ATGGATTCAATCCCTGAATTTGAAGGTCTCAACACCCAACAATTTGGGAGCTCAAATGTTCAAAATTTAGCTGTTGGGTCATCTTCTTCTTCTTCTTCTTCAAACAGCCGTTATGAGAACCAAAAACGGCGAGATTGGAACACATTTTGTCAATACCTTAAAAACCACCGACCGCCACTTGCTCTGTCGAGGTGTAGTGGAGCTCATGTTCTTGAATTCCTTCGGTATTTGGACCAATTTGGAAAGACCAAAGTCCACACTCCGATCTGCCCTTTCTACGGGCACCCCAACCCTCCAGCGCCATGTCCCTGCCCTCTACGCCAAGCTTGGGGCAGCCTCGATGCCCTTATTGGCCGCCTTAGGGCAGCCTTCGAAGAGAACGGTGGGATGCCCGAAGCTAACCCTTTTGGTGCCCGAGCTGTGAGGCTTTATCTTCGAGAGGTTCGTGATTTGCAGTCAAAAGCAAGAGGAATTAGCTATGAGAAGAAGAAACGAAAGCGCCCTCAACAACAACAACAACAGATCATTTCTCAACAGCCTCCCACAGGAGCTTAA

Coding sequence (CDS)

ATGGATTCAATCCCTGAATTTGAAGGTCTCAACACCCAACAATTTGGGAGCTCAAATGTTCAAAATTTAGCTGTTGGGTCATCTTCTTCTTCTTCTTCTTCAAACAGCCGTTATGAGAACCAAAAACGGCGAGATTGGAACACATTTTGTCAATACCTTAAAAACCACCGACCGCCACTTGCTCTGTCGAGGTGTAGTGGAGCTCATGTTCTTGAATTCCTTCGGTATTTGGACCAATTTGGAAAGACCAAAGTCCACACTCCGATCTGCCCTTTCTACGGGCACCCCAACCCTCCAGCGCCATGTCCCTGCCCTCTACGCCAAGCTTGGGGCAGCCTCGATGCCCTTATTGGCCGCCTTAGGGCAGCCTTCGAAGAGAACGGTGGGATGCCCGAAGCTAACCCTTTTGGTGCCCGAGCTGTGAGGCTTTATCTTCGAGAGGTTCGTGATTTGCAGTCAAAAGCAAGAGGAATTAGCTATGAGAAGAAGAAACGAAAGCGCCCTCAACAACAACAACAACAGATCATTTCTCAACAGCCTCCCACAGGAGCTTAA

Protein sequence

MDSIPEFEGLNTQQFGSSNVQNLAVGSSSSSSSSNSRYENQKRRDWNTFCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPQQQQQQIISQQPPTGA

Homology

[Close]

BLAST of Lag0033244 vs. NCBI nr
Match: XP_022963938.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucurbita moschata] >XP_022963939.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucurbita moschata] >XP_022967435.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucurbita maxima] >XP_022967436.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucurbita maxima] >XP_022967437.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucurbita maxima] >XP_023511397.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucurbita pepo subsp. pepo] >KAG6571527.1 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 335.1 bits (858), Expect = 3.8e-88
Identity = 171/186 (91.94%), Postives = 174/186 (93.55%), Query Frame = 0


Query: 1   MDS-IPEFEGL-NTQQFGSSNVQNLAVGSSSSSSSSNSRYENQKRRDWNTFCQYLKNHRP 60
           MDS IPEFEGL NTQQFG SN+QNL +G  SSSSSSNSRYENQKRRDWNTFCQYLKNHRP
Sbjct: 1   MDSIIPEFEGLNNTQQFGVSNLQNLGIG--SSSSSSNSRYENQKRRDWNTFCQYLKNHRP 60

Query: 61  PLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIG 120
           PLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIG
Sbjct: 61  PLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIG 120

Query: 121 RLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPQQQQQQIISQ 180
           RLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPQQQ+QQ    
Sbjct: 121 RLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPQQQRQQQQLP 180

Query: 181 QPPTGA 185
           QP  GA
Sbjct: 181 QPSNGA 184

[Close]

BLAST of Lag0033244 vs. NCBI nr
Match: XP_023532600.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 329.7 bits (844), Expect = 1.6e-86
Identity = 167/188 (88.83%), Postives = 170/188 (90.43%), Query Frame = 0


Query: 1   MDSIPEFEGLNTQQFGSSNVQNLAVG----SSSSSSSSNSRYENQKRRDWNTFCQYLKNH 60
           MDSI EFEGLN QQFG S+V NL  G    SSSSSSSSNSRYENQKRRDWNTFCQYLKNH
Sbjct: 1   MDSITEFEGLNAQQFGGSSVPNLGGGSSSSSSSSSSSSNSRYENQKRRDWNTFCQYLKNH 60

Query: 61  RPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDAL 120
           RPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDAL
Sbjct: 61  RPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDAL 120

Query: 121 IGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPQQQQQQII 180
           IGRLRAAFEENGGMPEANPFGARA+RLYLREVRD+QSKARGISYEKKKRKRPQQQ     
Sbjct: 121 IGRLRAAFEENGGMPEANPFGARAIRLYLREVRDVQSKARGISYEKKKRKRPQQQ----- 180

Query: 181 SQQPPTGA 185
              PPTGA
Sbjct: 181 ILPPPTGA 183

[Close]

BLAST of Lag0033244 vs. NCBI nr
Match: XP_022930979.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucurbita moschata] >KAG7036314.1 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 329.3 bits (843), Expect = 2.1e-86
Identity = 167/190 (87.89%), Postives = 171/190 (90.00%), Query Frame = 0


Query: 1   MDSIPEFEGLNTQQFGSSNVQNLAVG------SSSSSSSSNSRYENQKRRDWNTFCQYLK 60
           MDSI EFEGLN QQFG+S+V NL  G      SSSSSSSSNSRYENQKRRDWNTFCQYLK
Sbjct: 1   MDSITEFEGLNAQQFGASSVPNLGGGSSSSSSSSSSSSSSNSRYENQKRRDWNTFCQYLK 60

Query: 61  NHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLD 120
           NHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLD
Sbjct: 61  NHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLD 120

Query: 121 ALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPQQQQQQ 180
           ALIGRLRAAFEENGGMPEANPFGARA+RLYLREVRD+QSKARGISYEKKKRKRPQQQ   
Sbjct: 121 ALIGRLRAAFEENGGMPEANPFGARAIRLYLREVRDVQSKARGISYEKKKRKRPQQQ--- 180

Query: 181 IISQQPPTGA 185
                PPTGA
Sbjct: 181 --ILPPPTGA 185

[Close]

BLAST of Lag0033244 vs. NCBI nr
Match: XP_022995826.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucurbita maxima])

HSP 1 Score: 326.2 bits (835), Expect = 1.8e-85
Identity = 165/190 (86.84%), Postives = 169/190 (88.95%), Query Frame = 0


Query: 1   MDSIPEFEGLNTQQFGSSNVQNLAVG------SSSSSSSSNSRYENQKRRDWNTFCQYLK 60
           MDSI EFEGLN QQFG S+V NL  G      SSSSSSSSNSRYENQKRRDWNTFCQYLK
Sbjct: 1   MDSITEFEGLNAQQFGGSSVPNLGGGSSSSSSSSSSSSSSNSRYENQKRRDWNTFCQYLK 60

Query: 61  NHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLD 120
           NHRPPL LSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLD
Sbjct: 61  NHRPPLTLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLD 120

Query: 121 ALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPQQQQQQ 180
           +LIGRLRAAFEENGGMPEANPFGARA+RLYLREVRD+QSKARGISYEKKKRKRPQQQ   
Sbjct: 121 SLIGRLRAAFEENGGMPEANPFGARAIRLYLREVRDVQSKARGISYEKKKRKRPQQQ--- 180

Query: 181 IISQQPPTGA 185
                PPTGA
Sbjct: 181 --ILPPPTGA 185

[Close]

BLAST of Lag0033244 vs. NCBI nr
Match: KAG6606372.1 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 326.2 bits (835), Expect = 1.8e-85
Identity = 166/194 (85.57%), Postives = 171/194 (88.14%), Query Frame = 0


Query: 1   MDSIPEFEGLNTQQFGSSNVQNLAVG----------SSSSSSSSNSRYENQKRRDWNTFC 60
           MDSI EFEGLN QQFG+S+V NL  G          SSSSSSSSNSRYENQKRRDWNTFC
Sbjct: 1   MDSITEFEGLNAQQFGASSVPNLGGGSSSSSSSSSSSSSSSSSSNSRYENQKRRDWNTFC 60

Query: 61  QYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAW 120
           QYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAW
Sbjct: 61  QYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAW 120

Query: 121 GSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPQQ 180
           GSLDALIGRLRAAFEENGG+PEANPFGARA+RLYLREVRD+QSKARGISYEKKKRKRPQQ
Sbjct: 121 GSLDALIGRLRAAFEENGGIPEANPFGARAIRLYLREVRDVQSKARGISYEKKKRKRPQQ 180

Query: 181 QQQQIISQQPPTGA 185
           Q        PPTGA
Sbjct: 181 Q-----ILPPPTGA 189

[Close]

BLAST of Lag0033244 vs. ExPASy Swiss-Prot
Match: O82268 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 OS=Arabidopsis thaliana OX=3702 GN=LSH3 PE=1 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 5.2e-72
Identity = 129/144 (89.58%), Postives = 137/144 (95.14%), Query Frame = 0


Query: 25  VGSSSSSSSSNSRYENQKRRDWNTFCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTK 84
           + SSSS S+++SRYENQKRRDWNTF QYL+NHRPPL+LSRCSGAHVLEFLRYLDQFGKTK
Sbjct: 42  LSSSSSPSANSSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTK 101

Query: 85  VHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLY 144
           VHT IC FYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGG PE NPFGARAVRLY
Sbjct: 102 VHTNICHFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPETNPFGARAVRLY 161

Query: 145 LREVRDLQSKARGISYEKKKRKRP 169
           LREVRD+QSKARG+SYEKKKRKRP
Sbjct: 162 LREVRDMQSKARGVSYEKKKRKRP 185

[Close]

BLAST of Lag0033244 vs. ExPASy Swiss-Prot
Match: A2XAV5 (Protein G1-like6 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_09389 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 3.7e-70
Identity = 124/142 (87.32%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 27  SSSSSSSSNSRYENQKRRDWNTFCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVH 86
           S SSSS S SRYE+QKRRDWNTF QYL+NHRPPL+LSRCSGAHVLEFL+Y+DQFGKTKVH
Sbjct: 70  SPSSSSPSLSRYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVH 129

Query: 87  TPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLR 146
           TP+CPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAA+EENGG PE NPFGARAVRLYLR
Sbjct: 130 TPVCPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLR 189

Query: 147 EVRDLQSKARGISYEKKKRKRP 169
           EVR+ Q++ARGISYEKKKRK+P
Sbjct: 190 EVRETQARARGISYEKKKRKKP 211

[Close]

BLAST of Lag0033244 vs. ExPASy Swiss-Prot
Match: Q6K5X1 (Protein G1-like6 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L6 PE=1 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 3.7e-70
Identity = 124/142 (87.32%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 27  SSSSSSSSNSRYENQKRRDWNTFCQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVH 86
           S SSSS S SRYE+QKRRDWNTF QYL+NHRPPL+LSRCSGAHVLEFL+Y+DQFGKTKVH
Sbjct: 70  SPSSSSPSLSRYESQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLKYMDQFGKTKVH 129

Query: 87  TPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLR 146
           TP+CPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAA+EENGG PE NPFGARAVRLYLR
Sbjct: 130 TPVCPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGTPEMNPFGARAVRLYLR 189

Query: 147 EVRDLQSKARGISYEKKKRKRP 169
           EVR+ Q++ARGISYEKKKRK+P
Sbjct: 190 EVRETQARARGISYEKKKRKKP 211

[Close]

BLAST of Lag0033244 vs. ExPASy Swiss-Prot
Match: Q9LW68 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LSH4 PE=1 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.4e-69
Identity = 136/179 (75.98%), Postives = 143/179 (79.89%), Query Frame = 0


Query: 1   MDSIPEFEGL-----NTQQFGSSNVQNLAVGSSSSSSSSN------SRYENQKRRDWNTF 60
           MD I  F G      NT    ++        SSSSSSS        SRYENQKRRDWNTF
Sbjct: 1   MDHIIGFMGTTNMSHNTNLMIAAAATTTTTSSSSSSSSGGSGTNQLSRYENQKRRDWNTF 60

Query: 61  CQYLKNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQA 120
            QYL+NHRPPL+LSRCSGAHVLEFLRYLDQFGKTKVHT +CPF+GHPNPPAPC CPLRQA
Sbjct: 61  GQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQA 120

Query: 121 WGSLDALIGRLRAAFEENGGMPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRP 169
           WGSLDALIGRLRAAFEENGG PE NPFGARAVRLYLREVRD Q+KARGISYEKKKRKRP
Sbjct: 121 WGSLDALIGRLRAAFEENGGSPETNPFGARAVRLYLREVRDSQAKARGISYEKKKRKRP 179

[Close]

BLAST of Lag0033244 vs. ExPASy Swiss-Prot
Match: A2XVI8 (Protein G1-like4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_16643 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 2.9e-67
Identity = 122/159 (76.73%), Postives = 139/159 (87.42%), Query Frame = 0


Query: 16  GSSNVQNLAVGSSSSSSSSNSRYENQKRRDWNTFCQYLKNHRPPLALSRCSGAHVLEFLR 75
           G S+  N +    + +  S SRYE QKRRDWNTF QYL+NHRPPL+L++CSGAHVLEFLR
Sbjct: 20  GGSSSSNSSPSMGAGAPQSPSRYEAQKRRDWNTFGQYLRNHRPPLSLAQCSGAHVLEFLR 79

Query: 76  YLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGMPEANP 135
           YLDQFGKTKVHT  CPF+GHP+PPAPCPCPLRQAWGSLDAL+GRLRAAFEENGG PE+NP
Sbjct: 80  YLDQFGKTKVHTAACPFFGHPSPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGRPESNP 139

Query: 136 FGARAVRLYLREVRDLQSKARGISYEKKKRKRPQQQQQQ 175
           F ARAVRLYLREVR+ Q++ARG+SYEKKKRK+PQQQQ Q
Sbjct: 140 FAARAVRLYLREVREHQARARGVSYEKKKRKKPQQQQLQ 178

The following BLAST results are available for this feature:

BLAST of Lag0033244 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963938.1	3.8e-88	91.94	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucurbita moschata] >XP_0229639...	[more]
XP_023532600.1	1.6e-86	88.83	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022930979.1	2.1e-86	87.89	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucurbita moschata] >KAG7036314...	[more]
XP_022995826.1	1.8e-85	86.84	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucurbita maxima]	[more]
KAG6606372.1	1.8e-85	85.57	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3, partial [Cucurbita argyrosperma subs...	[more]

BLAST of Lag0033244 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82268	5.2e-72	89.58	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
A2XAV5	3.7e-70	87.32	Protein G1-like6 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_09389 PE=3 SV=1	[more]
Q6K5X1	3.7e-70	87.32	Protein G1-like6 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L6 PE=1 SV=1	[more]
Q9LW68	1.4e-69	75.98	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
A2XVI8	2.9e-67	76.73	Protein G1-like4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_16643 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 30..150 e-value: 1.9E-66 score: 221.9
IPR006936	ALOG domain	PROSITE	PS51697	ALOG	coord: 37..164 score: 84.495857
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..40
None	No IPR available	PANTHER	PTHR31165:SF89	G1-LIKE PROTEIN	coord: 16..178
IPR040222	ALOG family	PANTHER	PTHR31165	PROTEIN G1-LIKE2	coord: 16..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0033244.1	Lag0033244.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005634	nucleus