Lag0033179 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTATGAAATCTTGTTTGGCTTTGGTTTTGGTATTGGCATTGACATTGACATTGGTTGAACCATGCTTTTCATTTCGGTTTAGTCCTTGGAGGGTGCGAGTGTTTAACAACATGACAAATGGAGAAACAGTGTTGATTCATTGCAAATCCAAGGACGATGATCTGGGACAACATAATCTCGAAGTCGGGAAGGAGCTAACGTGGGGATTTAGAGAGAATATATTGTCGTCGACATTGTTTTGGTGCTACATACGCAATCAACATGATCATGTCTCTTTAGAAGTGTTTAATGCTGAAGATTATAACCTATACTATAGATGTAAGGGCTTAGAGTGCGTTTGGTCAATAAGGGATGATGGAATTTATCAGAGAAATAAGAATAGGGTCGACAATAAATTTTTTTTGAGAGCTAAATGGGAGCCCGGCTGGTAG ATGACTATGAAATCTTGTTTGGCTTTGGTTTTGGTATTGGCATTGACATTGACATTGGTTGAACCATGCTTTTCATTTCGGTTTAGTCCTTGGAGGGTGCGAGTGTTTAACAACATGACAAATGGAGAAACAGTGTTGATTCATTGCAAATCCAAGGACGATGATCTGGGACAACATAATCTCGAAGTCGGGAAGGAGCTAACGTGGGGATTTAGAGAGAATATATTGTCGTCGACATTGTTTTGGTGCTACATACGCAATCAACATGATCATGTCTCTTTAGAAGTGTTTAATGCTGAAGATTATAACCTATACTATAGATGTAAGGGCTTAGAGTGCGTTTGGTCAATAAGGGATGATGGAATTTATCAGAGAAATAAGAATAGGGTCGACAATAAATTTTTTTTGAGAGCTAAATGGGAGCCCGGCTGGTAG ATGACTATGAAATCTTGTTTGGCTTTGGTTTTGGTATTGGCATTGACATTGACATTGGTTGAACCATGCTTTTCATTTCGGTTTAGTCCTTGGAGGGTGCGAGTGTTTAACAACATGACAAATGGAGAAACAGTGTTGATTCATTGCAAATCCAAGGACGATGATCTGGGACAACATAATCTCGAAGTCGGGAAGGAGCTAACGTGGGGATTTAGAGAGAATATATTGTCGTCGACATTGTTTTGGTGCTACATACGCAATCAACATGATCATGTCTCTTTAGAAGTGTTTAATGCTGAAGATTATAACCTATACTATAGATGTAAGGGCTTAGAGTGCGTTTGGTCAATAAGGGATGATGGAATTTATCAGAGAAATAAGAATAGGGTCGACAATAAATTTTTTTTGAGAGCTAAATGGGAGCCCGGCTGGTAG MTMKSCLALVLVLALTLTLVEPCFSFRFSPWRVRVFNNMTNGETVLIHCKSKDDDLGQHNLEVGKELTWGFRENILSSTLFWCYIRNQHDHVSLEVFNAEDYNLYYRCKGLECVWSIRDDGIYQRNKNRVDNKFFLRAKWEPGW Homology
BLAST of Lag0033179 vs. NCBI nr
Match: XP_023532937.1 (S-protein homolog 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 182.2 bits (461), Expect = 3.2e-42 Identity = 83/142 (58.45%), Postives = 108/142 (76.06%), Query Frame = 0
BLAST of Lag0033179 vs. NCBI nr
Match: XP_022931006.1 (S-protein homolog 1-like [Cucurbita moschata]) HSP 1 Score: 182.2 bits (461), Expect = 3.2e-42 Identity = 82/142 (57.75%), Postives = 108/142 (76.06%), Query Frame = 0
BLAST of Lag0033179 vs. NCBI nr
Match: XP_016900393.1 (PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]) HSP 1 Score: 181.8 bits (460), Expect = 4.2e-42 Identity = 83/120 (69.17%), Postives = 93/120 (77.50%), Query Frame = 0
BLAST of Lag0033179 vs. NCBI nr
Match: XP_018469931.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC108841669 [Raphanus sativus]) HSP 1 Score: 127.5 bits (319), Expect = 9.4e-26 Identity = 52/118 (44.07%), Postives = 77/118 (65.25%), Query Frame = 0
BLAST of Lag0033179 vs. NCBI nr
Match: KAG2241623.1 (hypothetical protein Bca52824_090196 [Brassica carinata]) HSP 1 Score: 127.5 bits (319), Expect = 9.4e-26 Identity = 53/118 (44.92%), Postives = 76/118 (64.41%), Query Frame = 0
BLAST of Lag0033179 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.2e-26 Identity = 51/118 (43.22%), Postives = 73/118 (61.86%), Query Frame = 0
BLAST of Lag0033179 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 2.2e-25 Identity = 51/118 (43.22%), Postives = 74/118 (62.71%), Query Frame = 0
BLAST of Lag0033179 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 5.7e-10 Identity = 32/97 (32.99%), Postives = 51/97 (52.58%), Query Frame = 0
BLAST of Lag0033179 vs. ExPASy Swiss-Prot
Match: Q40975 (Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 9.8e-10 Identity = 31/95 (32.63%), Postives = 52/95 (54.74%), Query Frame = 0
BLAST of Lag0033179 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.3e-09 Identity = 37/101 (36.63%), Postives = 54/101 (53.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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