Lag0033143 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0033143
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	E3 ubiquitin-protein ligase RNF4-like
Location	chr11: 41173533 .. 41177745 (-)
RNA-Seq Expression	Lag0033143
Synteny	Lag0033143

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTACTCAGGCAATGAGGGGACATACCGCAAGAGGTTATCATCGTAGGAAATCATTGGACTTGGACCTAAACAGCATGCCACCAACTGAGAACCGAGAGCAGGGTGAACCATCTCAATTGGTGTTTCAGGAAGTACAAGTTAATCAACAACAGCCCGTACAACCTGCAATGATTGACATTGAGGCCATTGATGATGATGTCATTGAATCATCCGCCAGAGCTTTCGCTGAAGTATGCTACCTCGGGCTTCACTTTATTGTTTAATACTTATGATTCTTCTATCTGTGGTATATTCTTGCGCTATTGATTCTGATCTGTATTTCATGAATTCCATTGATTTTCTGTCAGGCAAAAAATAAATCTAGACGGAATGCTAGGAAGAATATAGTTGATGTGGATGCAGGTATGTTTATTTCAGCTGGTGGAAGACTATAGTTAGGTAGTTTTTTGCATCGCTGGTAGCATTGTTGGTCTATCTATGTTAATGTTTCCTCCCTTGTAATGCAATTTTATTTACATTTTATTCTCTATTTAGTTTTTATAAATTCTAAAGGTATATTGATGCTTGTTCATTATGAAAGGAAGCTTAGAAATTCAATATATTAGAATGTTGAACACTGCTATATTAATTAGGAAAGTTGGGATTGATAGTAACAGAAGCAGCAATTGAAACAACTGTTAGATTTGGTGATTCATGTTTTCAAACACATCCCCTTTATGATGATTTTAATTTTAGATTTTTTAAGGAATTAGGCACCTTGAAGCATTAAATACATAGAAAGAAGAATATGTGAAGGCACAAAAGGTGTATTTGTTTTTACCCCCTGATCTTTATTGAGATTTCTTCTAAAGCATAGCATCCATCACTAGTTAGACCCATTCTAACACTGATTTTTGGAATACCTTATACTCCTAGCTAGAGCATGCAAGCAAGAGAAATGAATAGAAGAAAGATTTATATTTGATCCATTCATCATTCCCAAAATACACCTTTATATCATATCACCAATGGCCATTTACAGATCATAGCTAATGATCATGATAATTTTTAGCTTGGAGAATTGTAACCACGGTCTACAATTGTTTGTGTAGATTTTGCTATTAACAAACCACCATAATTCTGCCACTGCATACTCTTTTGCTATTAACATGACTTTATGCTACATGGCATCACTTTCGATGGGTACCTTCATAGCTGTTGAGTTGAAAAATTGTTTTCTTCTGCTAACTTCTCTATTGAATCTTTCAACTTCATCGTCAAGACACAAACCATCCATAAAAAACTTGATTCTTTCACCAACCATCCACTGAAGTAACTTTATCAAAAAAAAAAAAAACCATCCACTGAAGTAAGGATATCAGAATCATTCAGTCACATATTCTCATACTCTAAAGGAAGAAGAATCCAGCTGAATTTATTGTACTTAACAATAAAAGAACTAGGTATTGATTGGAGGTAATATGTGATCAATCTACTCCTTAATCTTGAGTGTGTGTCCCTTCCATTGCTTGAAGGAATATCTGGCAATCATGGCTCACGAATGGGGTTGAACCTTTTTATACTGAGGATTCCTGAGACGCCCATGTGGAGATGATATAAGTGCCTCAAATGTTCATTACTGCTTAGAGCAGAGGCTTCCCATCCCAAGTCTTCGAGATCCTTTATTAGAAGCTTCATGAAATTGGTTCTTGCTTCATTGTGCTTGTTTTTTGTGTATCGTTGTATATTCTTTCATTTTTTATAGCTTGTTTCTTAAAAAAGAGAAAAAAAACCAATCAAGTGTGGCTCAACCAATCTGCTGAGAATTCCATAAATATGTCACCTATCTCCTATTTGGAAGTTTTTGTTTCTTGGAGGAGATCACAAAATTTGGGTAGAAACATAATTAACTTGTTGGTGAGCTATTAGTATTTAGGACTTCTTTATCTTGATTGGACTTTGGAGCCCCTTTCTTTAATAGGGTTCCCTTTTGGGGTTTTTTTTGGGTGCCCATTTTTCTCCCTTAAAAAAAGGATTTAGGACTTTTTCTTTTTCTTTTTTTTTTCCTGGGGTACAACATAGAAATCTTTATAGTAAAAATTCTTTCTACTTCCAAGTTTCCAACTGATATGGGGGTAATTTTAGATATTTATTATTTATATTCATGGTCGTACCATCGGTGGACTGTATTAGCCCTCAATAACCTCTTGTCTAATTGTCTATTGACCAACCATCTCCTTTCAAGTAACCCCCCCCCCCCCCCCCCCGGGTTGTAATGCTTGCATCTCTCATTCTCTCATCTTCTAATTGTCGCAGAAGAGCGGATCAAAGTGTCAAATAATAACCGGAGCAAGCGTAGGAGAGAAGTGCCAAATCAACGAACTGTAAATTCTGATCTATTAATCAATTTGGAAGCCAGCAACAGCTCTATGGTACTGGGACAATTTATATCTTTGTTACTCTTATTTTTGTGCAAAATTTTTCTTCTGTCATTAAGTTTAGTGTAGATCATATAATTTTCCTTTATTGCGTTTACAGTTTTGGGCTTGTCCCTCATAACCTATGTCTGTATCTCTCTCCTGGCATATTTCTGATGGCTATTTCTTGCATATAAAATATATCATTATTTATTATATGATTAAACGTACAAGAAAAAGTTGTGAGAAAAAATGGATGGGTGAACTTGTCATTGGAGTTATTGACTAATTATGTTTGAGAGAAATGATACCACCTTAGAAGCACGGATGTGGAAATGGGGATTATTCATGACACAAATAGGGCATGAGACAAGGACTGAGCAAGACAGAAAAGTGGGGCACATCTTTTTTGGCAAACCTCAGTGCACAGGCATGACAAAAGTGTATTTGAAATATTTTTCTTCAAATACTTATACACATTCTGAACCTTCAAAGAAGTTGGATTATATATAGTTAAAACTTTTATATGGTATATAGATTTAGAGACTGAGATACATATTTGGTCTGATACGATATTCAATTTCATGAAAAGTTGAATATTGAATAACAAATTATGTATCTCTCTTGAAGACAGACCAAATTTTGTCTGCCACCATTGGAATGGTGATGTTAGTTTGCCTTTCCCCCCATGAGTTGTTGCCGAGCTCTCTCCTTCATGTCCTTGGTTTATCAGCTGATTTGGTTTGGTAACTTTTGTTCTACCTTTTGGAAAGGTTAAGTTAGATTGTTTTATGGTTTATGGTTTATGGTTTAATAATTCACTTATCTCTCTCTCTCTCTATTTGGGTGCTTCTCTGTGATTTATCATCAAAATTAGGGTTGTTCATAGTTCGAATTGATTTGGTTTATCATATAACCGAGAACCAAACCATACATTTTGGTTTGTTTCCATTTTATTTGGATTTTATTATATTTAAAAAAGTGATGGTTGGATCTGAGCACAATAATTGAAAACTAAATCAGAAAATGCCTTATTTGATCTAATTGTCACTTCACTAGGTTTAATTTTTCTTTGTGACTAAACTCTTTAACCTTTAGCACCATCTTGGTGGTCATAATTTGTAGTTGTAGCATCTTATTAATGGTTAGTGTTGAAAATGTGATATTTTGCAAAAATAAATTTGGAAGTTCCCATAAAAAAATAATAAATTAATTTGGAAGGAAAGAAATTTGTGGGCTTTTGGTATTAGAGCAGTCTTTTGGTAATAGGAAAGAGATCAAATGACTTTTGAAAATATGTCCAAGTCAGTTGCTAGCCTTTGGAACGATGTATAGCGTACTACTTGGTGGCGTACAAACCACAAAATATTCTTTTGTAATTATAGTCTCATGATTTTGAATGATTGGAGAGCTTTGTTGTCATAGTTTTTGTATGGCACGGGCTTTCTCATCCCCTGGCCTATAGGCGTCCTATTTCTTTTGTTTATAATACAGCCTTCTGTTTCTTATAAAAAAAAACTAAATAAATAAGATTTGAAAATGGGATTGTCTCAGTGCTTAATCTATAGCCAACATGTGATTTCTGTCTTATCCGCAGAAAGAGAAACCTGCTCCACCGAAGGAGCCCAAATTCAGTTGTCCAATATGCATGGGTCCGTTAGTAGAGGAAACATCAACAAGATGTGGTCATATTTTCTGCAAGTCATGCATCAGGGCTGCAATAGTCGTCCAGAGTAAATGCCCAACCTGTAGGAAGAGAGTAACTGCCAAAGAACTCATCAGAGTATTCCTTCCTGGGACAAGCTTGGAGTGA

mRNA sequence

ATGAGTACTCAGGCAATGAGGGGACATACCGCAAGAGGTTATCATCGTAGGAAATCATTGGACTTGGACCTAAACAGCATGCCACCAACTGAGAACCGAGAGCAGGGTGAACCATCTCAATTGGTGTTTCAGGAAGTACAAGTTAATCAACAACAGCCCGTACAACCTGCAATGATTGACATTGAGGCCATTGATGATGATGTCATTGAATCATCCGCCAGAGCTTTCGCTGAAGCAAAAAATAAATCTAGACGGAATGCTAGGAAGAATATAGTTGATGTGGATGCAGAAGAGCGGATCAAAGTGTCAAATAATAACCGGAGCAAGCGTAGGAGAGAAGTGCCAAATCAACGAACTGTAAATTCTGATCTATTAATCAATTTGGAAGCCAGCAACAGCTCTATGAAAGAGAAACCTGCTCCACCGAAGGAGCCCAAATTCAGTTGTCCAATATGCATGGGTCCGTTAGTAGAGGAAACATCAACAAGATGTGGTCATATTTTCTGCAAGTCATGCATCAGGGCTGCAATAGTCGTCCAGAGTAAATGCCCAACCTGTAGGAAGAGAGTAACTGCCAAAGAACTCATCAGAGTATTCCTTCCTGGGACAAGCTTGGAGTGA

Coding sequence (CDS)

ATGAGTACTCAGGCAATGAGGGGACATACCGCAAGAGGTTATCATCGTAGGAAATCATTGGACTTGGACCTAAACAGCATGCCACCAACTGAGAACCGAGAGCAGGGTGAACCATCTCAATTGGTGTTTCAGGAAGTACAAGTTAATCAACAACAGCCCGTACAACCTGCAATGATTGACATTGAGGCCATTGATGATGATGTCATTGAATCATCCGCCAGAGCTTTCGCTGAAGCAAAAAATAAATCTAGACGGAATGCTAGGAAGAATATAGTTGATGTGGATGCAGAAGAGCGGATCAAAGTGTCAAATAATAACCGGAGCAAGCGTAGGAGAGAAGTGCCAAATCAACGAACTGTAAATTCTGATCTATTAATCAATTTGGAAGCCAGCAACAGCTCTATGAAAGAGAAACCTGCTCCACCGAAGGAGCCCAAATTCAGTTGTCCAATATGCATGGGTCCGTTAGTAGAGGAAACATCAACAAGATGTGGTCATATTTTCTGCAAGTCATGCATCAGGGCTGCAATAGTCGTCCAGAGTAAATGCCCAACCTGTAGGAAGAGAGTAACTGCCAAAGAACTCATCAGAGTATTCCTTCCTGGGACAAGCTTGGAGTGA

Protein sequence

MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENREQGEPSQLVFQEVQVNQQQPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERIKVSNNNRSKRRREVPNQRTVNSDLLINLEASNSSMKEKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIVVQSKCPTCRKRVTAKELIRVFLPGTSLE

Homology

[Close]

BLAST of Lag0033143 vs. NCBI nr
Match: XP_038888129.1 (E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888130.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888131.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888132.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888133.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888134.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888135.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida])

HSP 1 Score: 367.1 bits (941), Expect = 1.0e-97
Identity = 191/206 (92.72%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENREQGEPSQLVFQEVQVNQQQPVQPAMID 60
           MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENR+QGE SQL FQE QVNQQQ VQPAMID
Sbjct: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQHVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERIKVSNNNRSKRRREVPNQRTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEE  KVSNNNRSKRRR+V NQ+ V
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEEWTKVSNNNRSKRRRDVSNQQPV 120

Query: 121 NSDLLINLEASNSSMKEKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIVVQ 180
           NSDLLINLEASNSSMK KPAPPKEPKFSCPICMGPLVEETSTRCGHIFCK+CIRAAI VQ
Sbjct: 121 NSDLLINLEASNSSMKVKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           +KCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 NKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of Lag0033143 vs. NCBI nr
Match: XP_022967334.1 (E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967335.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967336.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967337.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967338.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967339.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima])

HSP 1 Score: 365.9 bits (938), Expect = 2.2e-97
Identity = 188/206 (91.26%), Postives = 195/206 (94.66%), Query Frame = 0


Query: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENREQGEPSQLVFQEVQVNQQQPVQPAMID 60
           MST+AMRGHTARGYHRRKSLDLDLNSMPPTENR+QGE SQ  FQE QVNQQQ VQPAMID
Sbjct: 1   MSTRAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFQEAQVNQQQSVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERIKVSNNNRSKRRREVPNQRTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEER + SNNNRSKRRR+VPNQ+TV
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120

Query: 121 NSDLLINLEASNSSMKEKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIVVQ 180
           NSDLLINLEASNSSMKEK APPKEP FSCPICMGPLVEETSTRCGHIFCK+CI+ AI VQ
Sbjct: 121 NSDLLINLEASNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           SKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of Lag0033143 vs. NCBI nr
Match: XP_004144388.1 (E3 ubiquitin-protein ligase RNF4 [Cucumis sativus] >XP_031738436.1 E3 ubiquitin-protein ligase RNF4 [Cucumis sativus] >KAE8650852.1 hypothetical protein Csa_000772 [Cucumis sativus])

HSP 1 Score: 364.8 bits (935), Expect = 5.0e-97
Identity = 188/206 (91.26%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENREQGEPSQLVFQEVQVNQQQPVQPAMID 60
           MSTQAMRGHT RGYHRRKSLDLDLNSMPPTENR+QGE SQL  Q+ QVNQQQPVQPAMID
Sbjct: 1   MSTQAMRGHTTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERIKVSNNNRSKRRREVPNQRTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDAEER +VSNNNRSKRRR+V N+ +V
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSV 120

Query: 121 NSDLLINLEASNSSMKEKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIVVQ 180
           NSDLLINLEASNSSMK KPAPPKEPKFSCPICMGPLVEETSTRCGHIFCK+CIRAAI VQ
Sbjct: 121 NSDLLINLEASNSSMKVKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIGVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           SKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of Lag0033143 vs. NCBI nr
Match: XP_022963653.1 (E3 ubiquitin-protein ligase RNF4-like [Cucurbita moschata] >XP_022963654.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita moschata] >XP_022963655.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita moschata] >XP_022963656.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita moschata] >XP_022963657.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita moschata])

HSP 1 Score: 363.6 bits (932), Expect = 1.1e-96
Identity = 187/206 (90.78%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENREQGEPSQLVFQEVQVNQQQPVQPAMID 60
           MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENR+QGE SQ  F E QVNQQQ VQPAMID
Sbjct: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFPEAQVNQQQSVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERIKVSNNNRSKRRREVPNQRTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEER + SNNNRSKRRR+VPNQ+TV
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120

Query: 121 NSDLLINLEASNSSMKEKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIVVQ 180
           NSDLLINLE SNSSMKEK APPKEP FSCPICMGPLVEETSTRCGHIFCK+CI+ AI VQ
Sbjct: 121 NSDLLINLEGSNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           SKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of Lag0033143 vs. NCBI nr
Match: XP_023554040.1 (E3 ubiquitin-protein ligase RNF4-like [Cucurbita pepo subsp. pepo] >XP_023554041.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita pepo subsp. pepo] >XP_023554043.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita pepo subsp. pepo] >XP_023554044.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 362.5 bits (929), Expect = 2.5e-96
Identity = 186/206 (90.29%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENREQGEPSQLVFQEVQVNQQQPVQPAMID 60
           MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENR+ GE SQ  FQE QVNQQQ VQPAMID
Sbjct: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDPGETSQFGFQEAQVNQQQSVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERIKVSNNNRSKRRREVPNQRTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEER + SNNNRSKRRR+VPNQ+TV
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120

Query: 121 NSDLLINLEASNSSMKEKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIVVQ 180
           NSDLLINLE SNSSMKEK +PPKEP FSCPICMGPLVEETSTRCGHIFCK+CI+ AI VQ
Sbjct: 121 NSDLLINLEGSNSSMKEKASPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           SKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of Lag0033143 vs. ExPASy Swiss-Prot
Match: Q9CQ29 (RING finger protein 151 OS=Mus musculus OX=10090 GN=Rnf151 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.7e-08
Identity = 26/59 (44.07%), Postives = 34/59 (57.63%), Query Frame = 0


Query: 140 APPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIVVQSKCPTCRKRVTAKELIRV 199
           A P + KF C +C G L   T   C HIFCK CI   +  Q+ CP CRK VT ++++ V
Sbjct: 11  ASPPDCKFLCSVCHGVLKRPTRLPCSHIFCKKCIFRWLARQNTCPCCRKEVTRRKMVEV 69

[Close]

BLAST of Lag0033143 vs. ExPASy Swiss-Prot
Match: E7FDW2 (E3 ubiquitin-protein ligase PDZRN3-B OS=Danio rerio OX=7955 GN=pdzrn3b PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 7.2e-06
Identity = 22/55 (40.00%), Postives = 32/55 (58.18%), Query Frame = 0


Query: 144 EPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIVVQSKCPTCRKRVTAKELIRV 199
           +P F C +C   L +  +T CGH+FC  C+   +V QS CP   +R++ KEL  V
Sbjct: 13  DPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQSSCPVKCQRISTKELNHV 67

[Close]

BLAST of Lag0033143 vs. ExPASy Swiss-Prot
Match: Q9QZS2 (E3 ubiquitin-protein ligase RNF4 OS=Mus musculus OX=10090 GN=Rnf4 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.6e-05
Identity = 40/157 (25.48%), Postives = 70/157 (44.59%), Query Frame = 0


Query: 52  QPVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERIKVSNNNRSKRR 111
           + ++P ++D+   D  VI        E + + RRN R+  +  D  +   VS+++    R
Sbjct: 56  ESLEPVVVDLTHNDSVVI-------VEERRRPRRNGRR--LRQDHADSCVVSSDDEELSR 115

Query: 112 REVPNQRTVNSDLLINLEASNSSMKEKPAPPK-EPKFSCPICMGPLVE-------ETSTR 171
                    + D+ +      S+  +    P+     SCPICM    E         ST 
Sbjct: 116 ---------DKDVYVTTHTPRSTKDDGATGPRPSGTVSCPICMDGYSEIVQNGRLIVSTE 175

Query: 172 CGHIFCKSCIRAAIVVQSKCPTCRKRVTAKELIRVFL 201
           CGH+FC  C+R ++   + CPTCRK++  K    +++
Sbjct: 176 CGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIYI 194

[Close]

BLAST of Lag0033143 vs. ExPASy Swiss-Prot
Match: Q3MV19 (TNF receptor-associated factor 6-A OS=Xenopus laevis OX=8355 GN=traf6-a PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 4.7e-05
Identity = 24/56 (42.86%), Postives = 32/56 (57.14%), Query Frame = 0


Query: 141 PPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAI-VVQSKCPTCRKRVTAKEL 196
           PP E K+ CPIC+  L E   T CGH FCK+CI  ++     KCP   + +  K+L
Sbjct: 64  PPLESKYECPICLMALREAVQTPCGHRFCKACILKSLRNAGHKCPVDNEILMEKQL 119

[Close]

BLAST of Lag0033143 vs. ExPASy Swiss-Prot
Match: B5DF45 (TNF receptor-associated factor 6 OS=Rattus norvegicus OX=10116 GN=Traf6 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 6.1e-05
Identity = 23/45 (51.11%), Postives = 27/45 (60.00%), Query Frame = 0


Query: 141 PPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAI-VVQSKCP 185
           PP E K+ CPIC+  L E   T CGH FCK+CI  +I     KCP
Sbjct: 62  PPLESKYECPICLMALREAVQTPCGHRFCKACITKSIRDAGHKCP 106

[Close]

BLAST of Lag0033143 vs. ExPASy TrEMBL
Match: A0A6J1HQI7 (E3 ubiquitin-protein ligase RNF4-like OS=Cucurbita maxima OX=3661 GN=LOC111466888 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.1e-97
Identity = 188/206 (91.26%), Postives = 195/206 (94.66%), Query Frame = 0


Query: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENREQGEPSQLVFQEVQVNQQQPVQPAMID 60
           MST+AMRGHTARGYHRRKSLDLDLNSMPPTENR+QGE SQ  FQE QVNQQQ VQPAMID
Sbjct: 1   MSTRAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFQEAQVNQQQSVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERIKVSNNNRSKRRREVPNQRTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEER + SNNNRSKRRR+VPNQ+TV
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120

Query: 121 NSDLLINLEASNSSMKEKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIVVQ 180
           NSDLLINLEASNSSMKEK APPKEP FSCPICMGPLVEETSTRCGHIFCK+CI+ AI VQ
Sbjct: 121 NSDLLINLEASNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           SKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of Lag0033143 vs. ExPASy TrEMBL
Match: A0A6J1HFU4 (E3 ubiquitin-protein ligase RNF4-like OS=Cucurbita moschata OX=3662 GN=LOC111463920 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.4e-97
Identity = 187/206 (90.78%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENREQGEPSQLVFQEVQVNQQQPVQPAMID 60
           MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENR+QGE SQ  F E QVNQQQ VQPAMID
Sbjct: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFPEAQVNQQQSVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERIKVSNNNRSKRRREVPNQRTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEER + SNNNRSKRRR+VPNQ+TV
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120

Query: 121 NSDLLINLEASNSSMKEKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIVVQ 180
           NSDLLINLE SNSSMKEK APPKEP FSCPICMGPLVEETSTRCGHIFCK+CI+ AI VQ
Sbjct: 121 NSDLLINLEGSNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           SKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of Lag0033143 vs. ExPASy TrEMBL
Match: A0A1S3CCB4 (E3 ubiquitin-protein ligase RNF4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499213 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.0e-96
Identity = 186/206 (90.29%), Postives = 195/206 (94.66%), Query Frame = 0


Query: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENREQGEPSQLVFQEVQVNQQQPVQPAMID 60
           MSTQAMRGH  RGYHRRKSLDLDLNSMPPTENR+QGE SQL  Q+ QVNQQQPVQPAMID
Sbjct: 1   MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERIKVSNNNRSKRRREVPNQRTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDAEER +VSNNNRSKRRR+V N+ +V
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSV 120

Query: 121 NSDLLINLEASNSSMKEKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIVVQ 180
           NSDLLINLEASNSSMK KPAPPKEPKFSCPICMGPLVEETST+CGHIFCK+CIRAAI VQ
Sbjct: 121 NSDLLINLEASNSSMKVKPAPPKEPKFSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           SKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of Lag0033143 vs. ExPASy TrEMBL
Match: A0A6J1E010 (E3 ubiquitin-protein ligase RNF4 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024653 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 6.0e-96
Identity = 186/206 (90.29%), Postives = 194/206 (94.17%), Query Frame = 0


Query: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENREQGEPSQLVFQEVQVNQQQPVQPAMID 60
           MSTQAMRG TARGYHRRKSLDLDLNSMPP+ENR+QGEPSQL  QE   NQQQP+QP MID
Sbjct: 1   MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERIKVSNNNRSKRRREVPNQRTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEER +VSNN RSKRRREV NQRTV
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRVSNNIRSKRRREVSNQRTV 120

Query: 121 NSDLLINLEASNSSMKEKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIVVQ 180
           NS+LLINLEASNSS+KEKP PPKEPKFSCPICMGPLVEETSTRCGHIFCK+CI+AAI VQ
Sbjct: 121 NSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           SKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of Lag0033143 vs. ExPASy TrEMBL
Match: A0A1S3CBW2 (E3 ubiquitin-protein ligase RNF4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499213 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.5e-94
Identity = 185/206 (89.81%), Postives = 194/206 (94.17%), Query Frame = 0


Query: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENREQGEPSQLVFQEVQVNQQQPVQPAMID 60
           MSTQAMRGH  RGYHRRKSLDLDLNSMPPTENR+QGE SQL  Q+ QVNQQQPVQPAMID
Sbjct: 1   MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERIKVSNNNRSKRRREVPNQRTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDA ER +VSNNNRSKRRR+V N+ +V
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDA-ERSRVSNNNRSKRRRDVSNRPSV 120

Query: 121 NSDLLINLEASNSSMKEKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIRAAIVVQ 180
           NSDLLINLEASNSSMK KPAPPKEPKFSCPICMGPLVEETST+CGHIFCK+CIRAAI VQ
Sbjct: 121 NSDLLINLEASNSSMKVKPAPPKEPKFSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           SKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 205

[Close]

BLAST of Lag0033143 vs. TAIR 10
Match: AT5G48655.2 (RING/U-box superfamily protein )

HSP 1 Score: 160.6 bits (405), Expect = 1.3e-39
Identity = 101/210 (48.10%), Postives = 136/210 (64.76%), Query Frame = 0


Query: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENREQGEPSQLVFQEVQVNQQQPVQPAMID 60
           M+T  +R    RG  RRK++ +DLN++P     ++G  + +    V +   QP  P MID
Sbjct: 1   MNTSEVR--VPRGNRRRKAV-IDLNAVPVD---QEGTSASVRTLTVPITPSQPA-PTMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKN--IVDVDAEERIKVSNNNRSKRRREVPNQR 120
           ++AI+DDVIESSA AFAEAK+KS RNAR+   +VDV++    +   N  +KRRR   ++ 
Sbjct: 61  VDAIEDDVIESSASAFAEAKSKS-RNARRRPLMVDVESGGTTRFPANISNKRRRIPSSES 120

Query: 121 TVNSDLL-----INLEASNSSMKEKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCI 180
            ++ +       +N+ +  S  K    PP+EPKF+CPICM P  EE ST+CGHIFCK CI
Sbjct: 121 VIDCEHASVNDEVNMSSRVSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCI 180

Query: 181 RAAIVVQSKCPTCRKRVTAKELIRVFLPGT 204
           + AI  Q KCPTCRK+VTAKELIRVFLP T
Sbjct: 181 KMAISRQGKCPTCRKKVTAKELIRVFLPTT 202

[Close]

BLAST of Lag0033143 vs. TAIR 10
Match: AT5G48655.1 (RING/U-box superfamily protein )

HSP 1 Score: 160.6 bits (405), Expect = 1.3e-39
Identity = 101/210 (48.10%), Postives = 136/210 (64.76%), Query Frame = 0


Query: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENREQGEPSQLVFQEVQVNQQQPVQPAMID 60
           M+T  +R    RG  RRK++ +DLN++P     ++G  + +    V +   QP  P MID
Sbjct: 1   MNTSEVR--VPRGNRRRKAV-IDLNAVPVD---QEGTSASVRTLTVPITPSQPA-PTMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKN--IVDVDAEERIKVSNNNRSKRRREVPNQR 120
           ++AI+DDVIESSA AFAEAK+KS RNAR+   +VDV++    +   N  +KRRR   ++ 
Sbjct: 61  VDAIEDDVIESSASAFAEAKSKS-RNARRRPLMVDVESGGTTRFPANISNKRRRIPSSES 120

Query: 121 TVNSDLL-----INLEASNSSMKEKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCI 180
            ++ +       +N+ +  S  K    PP+EPKF+CPICM P  EE ST+CGHIFCK CI
Sbjct: 121 VIDCEHASVNDEVNMSSRVSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCI 180

Query: 181 RAAIVVQSKCPTCRKRVTAKELIRVFLPGT 204
           + AI  Q KCPTCRK+VTAKELIRVFLP T
Sbjct: 181 KMAISRQGKCPTCRKKVTAKELIRVFLPTT 202

[Close]

BLAST of Lag0033143 vs. TAIR 10
Match: AT5G48655.3 (RING/U-box superfamily protein )

HSP 1 Score: 160.6 bits (405), Expect = 1.3e-39
Identity = 101/210 (48.10%), Postives = 136/210 (64.76%), Query Frame = 0


Query: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENREQGEPSQLVFQEVQVNQQQPVQPAMID 60
           M+T  +R    RG  RRK++ +DLN++P     ++G  + +    V +   QP  P MID
Sbjct: 1   MNTSEVR--VPRGNRRRKAV-IDLNAVPVD---QEGTSASVRTLTVPITPSQPA-PTMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKN--IVDVDAEERIKVSNNNRSKRRREVPNQR 120
           ++AI+DDVIESSA AFAEAK+KS RNAR+   +VDV++    +   N  +KRRR   ++ 
Sbjct: 61  VDAIEDDVIESSASAFAEAKSKS-RNARRRPLMVDVESGGTTRFPANISNKRRRIPSSES 120

Query: 121 TVNSDLL-----INLEASNSSMKEKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCI 180
            ++ +       +N+ +  S  K    PP+EPKF+CPICM P  EE ST+CGHIFCK CI
Sbjct: 121 VIDCEHASVNDEVNMSSRVSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCI 180

Query: 181 RAAIVVQSKCPTCRKRVTAKELIRVFLPGT 204
           + AI  Q KCPTCRK+VTAKELIRVFLP T
Sbjct: 181 KMAISRQGKCPTCRKKVTAKELIRVFLPTT 202

[Close]

BLAST of Lag0033143 vs. TAIR 10
Match: AT3G07200.1 (RING/U-box superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 3.0e-31
Identity = 86/177 (48.59%), Postives = 114/177 (64.41%), Query Frame = 0


Query: 30  TENREQGEPSQLVFQEVQVNQQQPVQPAMIDIEAI--DDDVIESSARAFAEAKNKSRRNA 89
           T+N  QG+  Q V  +     Q    P  I++ AI  DDDV+ES+A AFA+AKNKS R+A
Sbjct: 19  TQNEHQGD--QQVADQAPTVPQIVATPPRINVVAIEDDDDVVESTASAFAQAKNKS-RSA 78

Query: 90  RKNIVDVDAEERIKVSNNNRSKRRREVPNQRTVNSDLLINLEASNSSMKEKPAPP-KEPK 149
           R+    VD E     +  NRS RRR   +Q +V+S     +E +     +  APP +EPK
Sbjct: 79  RRGSQVVDVES----AGANRSTRRRS--DQTSVDS-----VELNKPRKSKAVAPPVEEPK 138

Query: 150 FSCPICMGPLVEETSTRCGHIFCKSCIRAAIVVQSKCPTCRKRVTAKELIRVFLPGT 204
           FSCPIC+ P  +E ST+CGHIFCK CI+ A+ +Q+KCPTCRK++T K+LIRVFLP T
Sbjct: 139 FSCPICLCPFTQEVSTKCGHIFCKKCIKNALSLQAKCPTCRKKITVKDLIRVFLPTT 181

[Close]

BLAST of Lag0033143 vs. TAIR 10
Match: AT3G07200.2 (RING/U-box superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 3.0e-31
Identity = 86/177 (48.59%), Postives = 114/177 (64.41%), Query Frame = 0


Query: 30  TENREQGEPSQLVFQEVQVNQQQPVQPAMIDIEAI--DDDVIESSARAFAEAKNKSRRNA 89
           T+N  QG+  Q V  +     Q    P  I++ AI  DDDV+ES+A AFA+AKNKS R+A
Sbjct: 19  TQNEHQGD--QQVADQAPTVPQIVATPPRINVVAIEDDDDVVESTASAFAQAKNKS-RSA 78

Query: 90  RKNIVDVDAEERIKVSNNNRSKRRREVPNQRTVNSDLLINLEASNSSMKEKPAPP-KEPK 149
           R+    VD E     +  NRS RRR   +Q +V+S     +E +     +  APP +EPK
Sbjct: 79  RRGSQVVDVES----AGANRSTRRRS--DQTSVDS-----VELNKPRKSKAVAPPVEEPK 138

Query: 150 FSCPICMGPLVEETSTRCGHIFCKSCIRAAIVVQSKCPTCRKRVTAKELIRVFLPGT 204
           FSCPIC+ P  +E ST+CGHIFCK CI+ A+ +Q+KCPTCRK++T K+LIRVFLP T
Sbjct: 139 FSCPICLCPFTQEVSTKCGHIFCKKCIKNALSLQAKCPTCRKKITVKDLIRVFLPTT 181

The following BLAST results are available for this feature:

BLAST of Lag0033143 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888129.1	1.0e-97	92.72	E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888130.1 E3 ubi...	[more]
XP_022967334.1	2.2e-97	91.26	E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967335.1 E3 ubiq...	[more]
XP_004144388.1	5.0e-97	91.26	E3 ubiquitin-protein ligase RNF4 [Cucumis sativus] >XP_031738436.1 E3 ubiquitin-...	[more]
XP_022963653.1	1.1e-96	90.78	E3 ubiquitin-protein ligase RNF4-like [Cucurbita moschata] >XP_022963654.1 E3 ub...	[more]
XP_023554040.1	2.5e-96	90.29	E3 ubiquitin-protein ligase RNF4-like [Cucurbita pepo subsp. pepo] >XP_023554041...	[more]

BLAST of Lag0033143 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CQ29	7.7e-08	44.07	RING finger protein 151 OS=Mus musculus OX=10090 GN=Rnf151 PE=1 SV=1	[more]
E7FDW2	7.2e-06	40.00	E3 ubiquitin-protein ligase PDZRN3-B OS=Danio rerio OX=7955 GN=pdzrn3b PE=1 SV=1	[more]
Q9QZS2	1.6e-05	25.48	E3 ubiquitin-protein ligase RNF4 OS=Mus musculus OX=10090 GN=Rnf4 PE=1 SV=1	[more]
Q3MV19	4.7e-05	42.86	TNF receptor-associated factor 6-A OS=Xenopus laevis OX=8355 GN=traf6-a PE=1 SV=...	[more]
B5DF45	6.1e-05	51.11	TNF receptor-associated factor 6 OS=Rattus norvegicus OX=10116 GN=Traf6 PE=2 SV=...	[more]

BLAST of Lag0033143 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQI7	1.1e-97	91.26	E3 ubiquitin-protein ligase RNF4-like OS=Cucurbita maxima OX=3661 GN=LOC11146688...	[more]
A0A6J1HFU4	5.4e-97	90.78	E3 ubiquitin-protein ligase RNF4-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A1S3CCB4	2.0e-96	90.29	E3 ubiquitin-protein ligase RNF4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1E010	6.0e-96	90.29	E3 ubiquitin-protein ligase RNF4 isoform X2 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A1S3CBW2	1.5e-94	89.81	E3 ubiquitin-protein ligase RNF4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of Lag0033143 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48655.2	1.3e-39	48.10	RING/U-box superfamily protein	[more]
AT5G48655.1	1.3e-39	48.10	RING/U-box superfamily protein	[more]
AT5G48655.3	1.3e-39	48.10	RING/U-box superfamily protein	[more]
AT3G07200.1	3.0e-31	48.59	RING/U-box superfamily protein	[more]
AT3G07200.2	3.0e-31	48.59	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 149..186 e-value: 9.4E-5 score: 31.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 149..187 score: 12.430266
None	No IPR available	PFAM	PF13923	zf-C3HC4_2	coord: 149..186 e-value: 1.8E-9 score: 37.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	PANTHER	PTHR47094	ELFLESS, ISOFORM B	coord: 1..204
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 148..193
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 122..201 e-value: 6.9E-17 score: 63.3
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 164..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0033143.1	Lag0033143.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding