Lag0033139 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0033139
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Ethylene-responsive transcription factor-like protein
Location	chr11: 41157665 .. 41160701 (+)
RNA-Seq Expression	Lag0033139
Synteny	Lag0033139

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACCTACCGAACCGTTCCTGTTCTTTGAGCCTTGTCCATTAGTTTATTGTTAGTCATTGAGTAGTTACATGAGAAATTTAACAGATTTTGGCCAGTGTTTTGAAGATGTCTATTTTCTTCTCATGGAACCTGATTGAGTTTGTTCTGCTTGTCTGTTCCAGATGTGAAGCGATCCAGGAAAAAGAACCGAACGGTACCACTGATAACAAAATTGAAGCTAATTATGGTGAGCTTAAGAAGACGTAAACTCCTGGGACTTTGCACTGGTAAACATTACTTTCTAAAGCTATGGTACTATTGACAAATTGTCATATCTCTTCAATTGGCTCGTAATGGAAGGCTTATACTCATTTTGCTTAGGCTAATTATTTTGTTGAAAGAACTGACTTCTTTTAAAATATATATACATATAGTTTTTCTTTTTTGATTCGTGATTTTGAATGAAACTGACTCAGAGGAATTAAAATTATATCACTTATTGATGTGGGATTTGTAGGCAAAGGCTCATTTGTTGCTCCAGTTTCGAAGTTTTCTGAAAATTTGACTGCTGAAGATCACGTGCACTGTACAAACTTCGTTAGTGTCCATCCCATCTGTTCGGACGAAGTTAACAAGATAAAGGAGGTCAGTCTAATTAAGATTTTCAATCTTTTCGATCACAAACACAATCACATCATGTTGTTAATAAAAGAACTGGCTACCTTGACTGCTCCTCTTTTAGTACATAGCTAATGTTTTTATGTCGATCTGTCTCCACTTCAATACCATTTATTCTTTCGTTTTCTTTCATAGCTTGATTTTCTGTCAGTTTTTGTGCTTTACAATTCTTATCTGTGGCAAAAATAACCTGTAAAATTGCAAAATTACCCAAATTATCCCGAGAGCCAGAATTATGGACATTTGGTTATTGATGTGAGGTTCAGATTTTGGTACATTTTGCAAAGCTTGCATCTAATCTGCTTTAAGTTGGCAGGGTGTTACTTAAAAAGGTTTTTTATTACCAAGGAATATATTTAATAAGAAATGATATGAGATGATGATTTGATGGCATGAAGTATTCATACTTCCAGTAATCTGCATAATGTTAATCTGGTTATAATGATTCATGTTTGAGCACCATTAACTTGACTCTGCCTTTTGATAATGGCCATCATCTCAGTCAGTACTGGTTATAGTTTAGGGAATGCTACACATGTTCACCATATAAATATTTCCATATATAAAAGAAGACCAATAGCTTTTTTCTTTCCTTTCTTTTTTCATCCCAATGCAAGAATGGTTTATGTCTTTTAGTACATAACATGAACATTTATGCTGGATACTCATCTCGATAATATGGCGTTTTTCAGAATCCCATTGCAAATATAGAACCTGAACCATCAAGGGTATCTGTTTTGGATACATCAAAAGAGAAAGTTGATGAGCCAATTGCAGGTTTGTTTGGTCTAAACTATTCCTACATATTTACGAGTTATATGATTGGGTATGATATTATTCAGGAATCACCTCCACAAAAAACATTGGATTCCTGTCCTTGGATGGGACATTATTTGTTTGAATATGCTATTGTCCCATCTTCAGAGAGAGAGATGGGGGGGGGGGGGGGGGGGAGGAGTGCTTTATGCTAGCCAATGAGCTTCCCAAGCAAGTTAGGGATTTTGACAAAATTTTGTTTGCTTGGTTTGCTGTGTATATGGATATTGCTACACTTAAATAGTTAAATTCTTATTCTAGAAAGTAATGGAATTGGCCTACCTGAGCATAGCTCAATGGCAAAGGCATCTTTTCTTCCTCTAGACGGTCATAGGTTTGAATTTCCCCTCCCACATTGATGTAATATTCTGAAGAACGCATGAGTTTGTAAAATGGTCCTTTGGCTGTTTGCTTGTGCGTGAAGTTCTTATTTAATAAACAACATTGCTTTCTTTTTCCATGTTGCTACCATTCTCAAAATACTATATAACCTCCACAGAGCCTCCGCCCCGGGTTGACTAATCTAGCAGTTCTACTAAATGAAGGAGACAAAGAAGCTGATTATAAATTCTTCTTTGGCTATATATCTTGCATGCTTTTTGCAAGGAAGATATGAGTTTCTTTTTTCACTGAATTTTCAAGTGATCTTTCTGCTTACAAAGTAGAAAATGTAATTTTAATAACAATTTTCTTGTTGTAACATCCAGAGATGAATCTTTTAGTGTCTATATTTATACATAACATATTGACGTGAATTGGTCTAATCTACTCGTACTGTCTGTAGTAATAAATCAATTCTGTTTTATGATTCAAGCTGCTTGCTACTGTATTAGCAGACCTGCCCGTAAAGCGCAGAAAGAGACACCGGAGAAAGAATTTTCCAGATGAACCAAGAGGTGTTTATTTCAAGAACATGAAATGGCAGGCTGCTATAAAGGTTGACAAGAAACAAATACACTTGGGAACTGTAGGATCACAAGAAGAAGCTGCTCATTTGTATGACAGGTAAAATTTTGATTCGATGCGACATAAAGTTCCTACTGATTGATGAATATATAATGGCATTTTGTACATAAGATAACTTGAAGATTGCTACATTTGAACATGTTTGTGCTTACAAAGTATTTATTATTCCATTTGTACTGCAATGCATTATTCTTTAGCATTTCAAAAAAGGGGAAAAAAATAGCCAATGAGCTGATCATCAGTCTTTTGCTATCCTAGAGCTGCTTTCATGTGTGGAAGGGAACCCAACTTTGAGCTCCCAGAGGAGGAGAAGAAAGAACTGAGAAAGTTCAATTGGGACGAGTTTTTAGCAATGACTCGCCACGCGATTACTAATAGAAGTAAGTCTCTCCTCTTTACAATTTGGATCATATTCTCAATCTAGATCATATGAGTTACTTATCATCATGTTTTTCAGAACAGAAAAGGCTCAGCCCAGAATCGAAGAAGTCTAAACTTCCTTCGCCGGGGAATGACGACTCGAACAAGAGACATGATGAGTTCAGTGACCTCTCAGCCATAGAAGACGTGGAACCAGTTGCCTCTACCTCCTGA

mRNA sequence

ATGCAACCTACCGAACCGTTCCTGTTCTTTGAGCCTTGTCCATTAGTTTATTATGTGAAGCGATCCAGGAAAAAGAACCGAACGGTACCACTGATAACAAAATTGAAGCTAATTATGGTGAGCTTAAGAAGACGTAAACTCCTGGGACTTTGCACTGGCAAAGGCTCATTTGTTGCTCCAGTTTCGAAGTTTTCTGAAAATTTGACTGCTGAAGATCACGTGCACTGTACAAACTTCGTTAGTGTCCATCCCATCTGTTCGGACGAAGTTAACAAGATAAAGGAGAATCCCATTGCAAATATAGAACCTGAACCATCAAGGGTATCTGTTTTGGATACATCAAAAGAGAAAGTTGATGAGCCAATTGCAGACCTGCCCGTAAAGCGCAGAAAGAGACACCGGAGAAAGAATTTTCCAGATGAACCAAGAGGTGTTTATTTCAAGAACATGAAATGGCAGGCTGCTATAAAGGTTGACAAGAAACAAATACACTTGGGAACTGTAGGATCACAAGAAGAAGCTGCTCATTTGTATGACAGAGCTGCTTTCATGTGTGGAAGGGAACCCAACTTTGAGCTCCCAGAGGAGGAGAAGAAAGAACTGAGAAAGTTCAATTGGGACGAGTTTTTAGCAATGACTCGCCACGCGATTACTAATAGAAAACAGAAAAGGCTCAGCCCAGAATCGAAGAAGTCTAAACTTCCTTCGCCGGGGAATGACGACTCGAACAAGAGACATGATGAGTTCAGTGACCTCTCAGCCATAGAAGACGTGGAACCAGTTGCCTCTACCTCCTGA

Coding sequence (CDS)

ATGCAACCTACCGAACCGTTCCTGTTCTTTGAGCCTTGTCCATTAGTTTATTATGTGAAGCGATCCAGGAAAAAGAACCGAACGGTACCACTGATAACAAAATTGAAGCTAATTATGGTGAGCTTAAGAAGACGTAAACTCCTGGGACTTTGCACTGGCAAAGGCTCATTTGTTGCTCCAGTTTCGAAGTTTTCTGAAAATTTGACTGCTGAAGATCACGTGCACTGTACAAACTTCGTTAGTGTCCATCCCATCTGTTCGGACGAAGTTAACAAGATAAAGGAGAATCCCATTGCAAATATAGAACCTGAACCATCAAGGGTATCTGTTTTGGATACATCAAAAGAGAAAGTTGATGAGCCAATTGCAGACCTGCCCGTAAAGCGCAGAAAGAGACACCGGAGAAAGAATTTTCCAGATGAACCAAGAGGTGTTTATTTCAAGAACATGAAATGGCAGGCTGCTATAAAGGTTGACAAGAAACAAATACACTTGGGAACTGTAGGATCACAAGAAGAAGCTGCTCATTTGTATGACAGAGCTGCTTTCATGTGTGGAAGGGAACCCAACTTTGAGCTCCCAGAGGAGGAGAAGAAAGAACTGAGAAAGTTCAATTGGGACGAGTTTTTAGCAATGACTCGCCACGCGATTACTAATAGAAAACAGAAAAGGCTCAGCCCAGAATCGAAGAAGTCTAAACTTCCTTCGCCGGGGAATGACGACTCGAACAAGAGACATGATGAGTTCAGTGACCTCTCAGCCATAGAAGACGTGGAACCAGTTGCCTCTACCTCCTGA

Protein sequence

MQPTEPFLFFEPCPLVYYVKRSRKKNRTVPLITKLKLIMVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHVHCTNFVSVHPICSDEVNKIKENPIANIEPEPSRVSVLDTSKEKVDEPIADLPVKRRKRHRRKNFPDEPRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFLAMTRHAITNRKQKRLSPESKKSKLPSPGNDDSNKRHDEFSDLSAIEDVEPVASTS

Homology

[Close]

BLAST of Lag0033139 vs. NCBI nr
Match: XP_038887390.1 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Benincasa hispida] >XP_038887391.1 ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Benincasa hispida])

HSP 1 Score: 396.4 bits (1017), Expect = 2.0e-106
Identity = 209/237 (88.19%), Postives = 217/237 (91.56%), Query Frame = 0


Query: 39  MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHVHCTNFVSVHPICSDEVNKIKENPI 98
           MVSLRRRKLLGLCTGKGSFVAPV KFSENLTAEDHVHCTNFVSV+PICSD+VNKIKENPI
Sbjct: 1   MVSLRRRKLLGLCTGKGSFVAPVLKFSENLTAEDHVHCTNFVSVYPICSDQVNKIKENPI 60

Query: 99  ANIEPEPSRVSVLDTSKEK----VDEPI-ADLPVKRRKRHRRKNFPDEP---RGVYFKNM 158
           ANIEPE S VSVLDTS+E+     DEPI AD P+KRRKRHRRK+FPDE    RGVYFKNM
Sbjct: 61  ANIEPESSGVSVLDTSREQNDTTNDEPIAADPPIKRRKRHRRKHFPDESFLMRGVYFKNM 120

Query: 159 KWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFL 218
           KWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFL
Sbjct: 121 KWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFL 180

Query: 219 AMTRHAITNRKQKRLSPESKKSKLPSPGN--DDSNKRHDEFSDLSAIEDVEPVASTS 266
           AMTRHAITNRKQKRLSPES KSKL SPGN  DDSNKRHDEF D SA+ED+EPVASTS
Sbjct: 181 AMTRHAITNRKQKRLSPESNKSKLSSPGNDDDDSNKRHDEFIDPSALEDMEPVASTS 237

[Close]

BLAST of Lag0033139 vs. NCBI nr
Match: XP_011651656.1 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucumis sativus])

HSP 1 Score: 386.0 bits (990), Expect = 2.7e-103
Identity = 200/234 (85.47%), Postives = 213/234 (91.03%), Query Frame = 0


Query: 39  MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHVHCTNFVSVHPICSDEVNKIKENPI 98
           MVSLRRRKLLGL +GK SFVAPV KFSENLTAEDHVHCT+FV V+PICSD+VNKI+ENP 
Sbjct: 1   MVSLRRRKLLGLYSGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPT 60

Query: 99  ANIEPEPSRVSVLDTSKEKV----DEPIADLPVKRRKRHRRKNFPDEP---RGVYFKNMK 158
           ANIEPE S VSVLDTSKE++    DEPIAD PVKRRKRHRRK+FPDE    RGVYFKNMK
Sbjct: 61  ANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 120

Query: 159 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFLA 218
           WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEK+ELRKFNWDEFLA
Sbjct: 121 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 180

Query: 219 MTRHAITNRKQKRLSPESKKSKLPSPGNDDSNKRHDEFSDLSAIEDVEPVASTS 266
           MTR+ ITNRKQKRLSPESKKS+L SPGNDDSNKRHD+F D S +EDVEPVASTS
Sbjct: 181 MTRNTITNRKQKRLSPESKKSELSSPGNDDSNKRHDKFIDPSFLEDVEPVASTS 234

[Close]

BLAST of Lag0033139 vs. NCBI nr
Match: XP_022159538.1 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Momordica charantia])

HSP 1 Score: 369.8 bits (948), Expect = 2.0e-98
Identity = 188/231 (81.39%), Postives = 207/231 (89.61%), Query Frame = 0


Query: 39  MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHVHCTNFVSVHPICSDEVNKIKENPI 98
           MVSLRRRKLLG C+GKGSF+APV KFSENLT E+ +HCTNFVSVHPICSD++NKIKENPI
Sbjct: 1   MVSLRRRKLLGFCSGKGSFLAPVHKFSENLTTENPIHCTNFVSVHPICSDDINKIKENPI 60

Query: 99  ANIEPE-PSRVSVLDTSKEKVDEPIADLPVKRRKRHRRKNFPDEP---RGVYFKNMKWQA 158
           AN EPE  SRV+VLDTSKEK +E IAD PV+ RKRH RK FPDEP   RGVYFKNMKWQA
Sbjct: 61  ANTEPESSSRVTVLDTSKEKNEESIADPPVQCRKRHWRKRFPDEPFLMRGVYFKNMKWQA 120

Query: 159 AIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFLAMTR 218
           AIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGR+PNFELPEEEK+ELRK NWD+FLA+TR
Sbjct: 121 AIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGRKPNFELPEEEKQELRKLNWDQFLAVTR 180

Query: 219 HAITNRKQKRLSPESKKSKLPSPGNDDSNKRHDEFSDLSAIEDVEPVASTS 266
           H ITNRKQKRLSPES KSKLPS GN DS+KRH +FS+LS +ED++P ASTS
Sbjct: 181 HVITNRKQKRLSPESNKSKLPSSGNHDSDKRHGKFSNLSTLEDMKPEASTS 231

[Close]

BLAST of Lag0033139 vs. NCBI nr
Match: XP_008460376.1 (PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X2 [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 5.8e-98
Identity = 197/242 (81.40%), Postives = 211/242 (87.19%), Query Frame = 0


Query: 11  EPCPLVYYVKRSRKKNRTVPLITKLKLIMVSLRRRKLLGLCTGKGSFVAPVSKFSENLTA 70
           EP  LV  V    +K +T+PLIT  KLIMVSLRRRKLLGL +GK SFVAPV KFSENLTA
Sbjct: 2   EPAKLVCEV--ILEKRQTIPLITGSKLIMVSLRRRKLLGLYSGKASFVAPVLKFSENLTA 61

Query: 71  EDHVHCTNFVSVHPICSDEVNKIKENPIANIEPEPSRVSVLDTSKEKVD----EPIADLP 130
           E HVHCT+ V V+PICSDEVNKI+ENPIANIEPE S VSVLDTSKE++D    EPIAD P
Sbjct: 62  EVHVHCTSSVRVYPICSDEVNKIEENPIANIEPESSGVSVLDTSKEQIDTTNGEPIADPP 121

Query: 131 VKRRKRHRRKNFPDEP---RGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAF 190
           VKRRKRHRRK+FPDE    RGVYFKNMKWQAAIKVDKKQIHLGTV SQEEAAHLYDRAAF
Sbjct: 122 VKRRKRHRRKHFPDESFLMRGVYFKNMKWQAAIKVDKKQIHLGTVASQEEAAHLYDRAAF 181

Query: 191 MCGREPNFELPEEEKKELRKFNWDEFLAMTRHAITNRKQKRLSPESKKSKLPSPGNDDSN 246
           MCGREPNFELPEEEK+ELRKFNWDEFLAMTR+ ITNRKQKRL+PESKKS+L SPGNDDSN
Sbjct: 182 MCGREPNFELPEEEKQELRKFNWDEFLAMTRNTITNRKQKRLNPESKKSELSSPGNDDSN 241

[Close]

BLAST of Lag0033139 vs. NCBI nr
Match: XP_008460375.1 (PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucumis melo] >XP_016902531.1 PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucumis melo])

HSP 1 Score: 367.9 bits (943), Expect = 7.6e-98
Identity = 192/229 (83.84%), Postives = 206/229 (89.96%), Query Frame = 0


Query: 24  KKNRTVPLITKLKLIMVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHVHCTNFVSVH 83
           +K +T+PLIT  KLIMVSLRRRKLLGL +GK SFVAPV KFSENLTAE HVHCT+ V V+
Sbjct: 13  EKRQTIPLITGSKLIMVSLRRRKLLGLYSGKASFVAPVLKFSENLTAEVHVHCTSSVRVY 72

Query: 84  PICSDEVNKIKENPIANIEPEPSRVSVLDTSKEKVD----EPIADLPVKRRKRHRRKNFP 143
           PICSDEVNKI+ENPIANIEPE S VSVLDTSKE++D    EPIAD PVKRRKRHRRK+FP
Sbjct: 73  PICSDEVNKIEENPIANIEPESSGVSVLDTSKEQIDTTNGEPIADPPVKRRKRHRRKHFP 132

Query: 144 DEP---RGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEE 203
           DE    RGVYFKNMKWQAAIKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPEE
Sbjct: 133 DESFLMRGVYFKNMKWQAAIKVDKKQIHLGTVASQEEAAHLYDRAAFMCGREPNFELPEE 192

Query: 204 EKKELRKFNWDEFLAMTRHAITNRKQKRLSPESKKSKLPSPGNDDSNKR 246
           EK+ELRKFNWDEFLAMTR+ ITNRKQKRL+PESKKS+L SPGNDDSNKR
Sbjct: 193 EKQELRKFNWDEFLAMTRNTITNRKQKRLNPESKKSELSSPGNDDSNKR 241

[Close]

BLAST of Lag0033139 vs. ExPASy Swiss-Prot
Match: Q56XP9 (Ethylene-responsive transcription factor-like protein At4g13040 OS=Arabidopsis thaliana OX=3702 GN=At4g13040 PE=2 SV=2)

HSP 1 Score: 148.3 bits (373), Expect = 1.2e-34
Identity = 102/234 (43.59%), Postives = 131/234 (55.98%), Query Frame = 0


Query: 39  MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHV-----------------HCTNFVS 98
           MVSLRRR+LLGLC G   +V P+      LTAE+ +                      V 
Sbjct: 1   MVSLRRRRLLGLCCGPNGYVTPL----PFLTAEEMITGIPNPNARAAYNPGPAETVTTVI 60

Query: 99  VHPICSDEVNKIKENPIANIEPEPSRVSVL--DTSKEKVDEPIADLPVKRRKRHRRKNFP 158
           V     +E ++   +   +   + S +S +  D+   K   P      KRRK+HRRK   
Sbjct: 61  VEKKAIEERSRRTRSKHMHFRSDYSDISPVNSDSISPKYQPP------KRRKQHRRKRVH 120

Query: 159 D-EP---RGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPE 218
           + EP   RGVY+KNMKWQAAIKV+KKQIHLGT  SQEEAA LYDRAAFMCGREPNFEL E
Sbjct: 121 NQEPCLMRGVYYKNMKWQAAIKVEKKQIHLGTFSSQEEAARLYDRAAFMCGREPNFELSE 180

Query: 219 EEKKELRKFNWDEFLAMTRHAITNRKQK-RLSPESKKSKLPSPGNDDSNKRHDE 249
           E  +EL++ +W+EFL  TR  ITN+K K R+  E  K     P   +  ++  +
Sbjct: 181 EVIRELKQQSWEEFLNCTRRTITNKKPKSRIEHEDTKINASMPHQPEEEEQDSD 224

[Close]

BLAST of Lag0033139 vs. ExPASy TrEMBL
Match: A0A0A0LCE7 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G630280 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.3e-103
Identity = 200/234 (85.47%), Postives = 213/234 (91.03%), Query Frame = 0


Query: 39  MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHVHCTNFVSVHPICSDEVNKIKENPI 98
           MVSLRRRKLLGL +GK SFVAPV KFSENLTAEDHVHCT+FV V+PICSD+VNKI+ENP 
Sbjct: 1   MVSLRRRKLLGLYSGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPT 60

Query: 99  ANIEPEPSRVSVLDTSKEKV----DEPIADLPVKRRKRHRRKNFPDEP---RGVYFKNMK 158
           ANIEPE S VSVLDTSKE++    DEPIAD PVKRRKRHRRK+FPDE    RGVYFKNMK
Sbjct: 61  ANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMK 120

Query: 159 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFLA 218
           WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEK+ELRKFNWDEFLA
Sbjct: 121 WQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLA 180

Query: 219 MTRHAITNRKQKRLSPESKKSKLPSPGNDDSNKRHDEFSDLSAIEDVEPVASTS 266
           MTR+ ITNRKQKRLSPESKKS+L SPGNDDSNKRHD+F D S +EDVEPVASTS
Sbjct: 181 MTRNTITNRKQKRLSPESKKSELSSPGNDDSNKRHDKFIDPSFLEDVEPVASTS 234

[Close]

BLAST of Lag0033139 vs. ExPASy TrEMBL
Match: A0A6J1DZ33 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025925 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 9.7e-99
Identity = 188/231 (81.39%), Postives = 207/231 (89.61%), Query Frame = 0


Query: 39  MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHVHCTNFVSVHPICSDEVNKIKENPI 98
           MVSLRRRKLLG C+GKGSF+APV KFSENLT E+ +HCTNFVSVHPICSD++NKIKENPI
Sbjct: 1   MVSLRRRKLLGFCSGKGSFLAPVHKFSENLTTENPIHCTNFVSVHPICSDDINKIKENPI 60

Query: 99  ANIEPE-PSRVSVLDTSKEKVDEPIADLPVKRRKRHRRKNFPDEP---RGVYFKNMKWQA 158
           AN EPE  SRV+VLDTSKEK +E IAD PV+ RKRH RK FPDEP   RGVYFKNMKWQA
Sbjct: 61  ANTEPESSSRVTVLDTSKEKNEESIADPPVQCRKRHWRKRFPDEPFLMRGVYFKNMKWQA 120

Query: 159 AIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFLAMTR 218
           AIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGR+PNFELPEEEK+ELRK NWD+FLA+TR
Sbjct: 121 AIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGRKPNFELPEEEKQELRKLNWDQFLAVTR 180

Query: 219 HAITNRKQKRLSPESKKSKLPSPGNDDSNKRHDEFSDLSAIEDVEPVASTS 266
           H ITNRKQKRLSPES KSKLPS GN DS+KRH +FS+LS +ED++P ASTS
Sbjct: 181 HVITNRKQKRLSPESNKSKLPSSGNHDSDKRHGKFSNLSTLEDMKPEASTS 231

[Close]

BLAST of Lag0033139 vs. ExPASy TrEMBL
Match: A0A1S3CCT4 (ethylene-responsive transcription factor-like protein At4g13040 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499216 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.8e-98
Identity = 197/242 (81.40%), Postives = 211/242 (87.19%), Query Frame = 0


Query: 11  EPCPLVYYVKRSRKKNRTVPLITKLKLIMVSLRRRKLLGLCTGKGSFVAPVSKFSENLTA 70
           EP  LV  V    +K +T+PLIT  KLIMVSLRRRKLLGL +GK SFVAPV KFSENLTA
Sbjct: 2   EPAKLVCEV--ILEKRQTIPLITGSKLIMVSLRRRKLLGLYSGKASFVAPVLKFSENLTA 61

Query: 71  EDHVHCTNFVSVHPICSDEVNKIKENPIANIEPEPSRVSVLDTSKEKVD----EPIADLP 130
           E HVHCT+ V V+PICSDEVNKI+ENPIANIEPE S VSVLDTSKE++D    EPIAD P
Sbjct: 62  EVHVHCTSSVRVYPICSDEVNKIEENPIANIEPESSGVSVLDTSKEQIDTTNGEPIADPP 121

Query: 131 VKRRKRHRRKNFPDEP---RGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAF 190
           VKRRKRHRRK+FPDE    RGVYFKNMKWQAAIKVDKKQIHLGTV SQEEAAHLYDRAAF
Sbjct: 122 VKRRKRHRRKHFPDESFLMRGVYFKNMKWQAAIKVDKKQIHLGTVASQEEAAHLYDRAAF 181

Query: 191 MCGREPNFELPEEEKKELRKFNWDEFLAMTRHAITNRKQKRLSPESKKSKLPSPGNDDSN 246
           MCGREPNFELPEEEK+ELRKFNWDEFLAMTR+ ITNRKQKRL+PESKKS+L SPGNDDSN
Sbjct: 182 MCGREPNFELPEEEKQELRKFNWDEFLAMTRNTITNRKQKRLNPESKKSELSSPGNDDSN 241

[Close]

BLAST of Lag0033139 vs. ExPASy TrEMBL
Match: A0A1S3CCB8 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499216 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 3.7e-98
Identity = 192/229 (83.84%), Postives = 206/229 (89.96%), Query Frame = 0


Query: 24  KKNRTVPLITKLKLIMVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHVHCTNFVSVH 83
           +K +T+PLIT  KLIMVSLRRRKLLGL +GK SFVAPV KFSENLTAE HVHCT+ V V+
Sbjct: 13  EKRQTIPLITGSKLIMVSLRRRKLLGLYSGKASFVAPVLKFSENLTAEVHVHCTSSVRVY 72

Query: 84  PICSDEVNKIKENPIANIEPEPSRVSVLDTSKEKVD----EPIADLPVKRRKRHRRKNFP 143
           PICSDEVNKI+ENPIANIEPE S VSVLDTSKE++D    EPIAD PVKRRKRHRRK+FP
Sbjct: 73  PICSDEVNKIEENPIANIEPESSGVSVLDTSKEQIDTTNGEPIADPPVKRRKRHRRKHFP 132

Query: 144 DEP---RGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEE 203
           DE    RGVYFKNMKWQAAIKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPEE
Sbjct: 133 DESFLMRGVYFKNMKWQAAIKVDKKQIHLGTVASQEEAAHLYDRAAFMCGREPNFELPEE 192

Query: 204 EKKELRKFNWDEFLAMTRHAITNRKQKRLSPESKKSKLPSPGNDDSNKR 246
           EK+ELRKFNWDEFLAMTR+ ITNRKQKRL+PESKKS+L SPGNDDSNKR
Sbjct: 193 EKQELRKFNWDEFLAMTRNTITNRKQKRLNPESKKSELSSPGNDDSNKR 241

[Close]

BLAST of Lag0033139 vs. ExPASy TrEMBL
Match: A0A6J1ESB0 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437284 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.8e-97
Identity = 188/227 (82.82%), Postives = 200/227 (88.11%), Query Frame = 0


Query: 39  MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHVHCTNFVSVHPICSDEVNKIKENPI 98
           MVSLRRRKLLGLCTGKGSF APVSK SEN TAED  HCTNF+SVHPICS+E N+I+ENP+
Sbjct: 1   MVSLRRRKLLGLCTGKGSFDAPVSKSSENSTAEDLEHCTNFISVHPICSNEFNEIEENPV 60

Query: 99  ANIEPEPSRVSVLDTSKEKVDEPIADLPVKRRKRHRRKNFPDE---PRGVYFKNMKWQAA 158
           AN+E E SRVSVLDTSKEK DEP A+ PVKRRKRHRRK FP+E    RGVYFKNMKWQAA
Sbjct: 61  ANLETESSRVSVLDTSKEKSDEPFAEPPVKRRKRHRRKQFPEECFLMRGVYFKNMKWQAA 120

Query: 159 IKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDEFLAMTRH 218
           IKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPE EKKELRKFNWDEFLAMTR 
Sbjct: 121 IKVDKKQIHLGTVESQEEAAHLYDRAAFMCGREPNFELPEAEKKELRKFNWDEFLAMTRL 180

Query: 219 AITNRKQKRLSPESKKSKLPSPGNDDSNKRHDEFSDLSAIEDVEPVA 263
           AI N+KQKR+SPESK SKLP  GNDD NKR DEF DLSA ED+EP+A
Sbjct: 181 AIANKKQKRVSPESKNSKLPIVGNDDLNKRQDEFIDLSAPEDIEPLA 227

[Close]

BLAST of Lag0033139 vs. TAIR 10
Match: AT4G13040.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 148.3 bits (373), Expect = 8.8e-36
Identity = 102/234 (43.59%), Postives = 131/234 (55.98%), Query Frame = 0


Query: 39  MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHV-----------------HCTNFVS 98
           MVSLRRR+LLGLC G   +V P+      LTAE+ +                      V 
Sbjct: 1   MVSLRRRRLLGLCCGPNGYVTPL----PFLTAEEMITGIPNPNARAAYNPGPAETVTTVI 60

Query: 99  VHPICSDEVNKIKENPIANIEPEPSRVSVL--DTSKEKVDEPIADLPVKRRKRHRRKNFP 158
           V     +E ++   +   +   + S +S +  D+   K   P      KRRK+HRRK   
Sbjct: 61  VEKKAIEERSRRTRSKHMHFRSDYSDISPVNSDSISPKYQPP------KRRKQHRRKRVH 120

Query: 159 D-EP---RGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPE 218
           + EP   RGVY+KNMKWQAAIKV+KKQIHLGT  SQEEAA LYDRAAFMCGREPNFEL E
Sbjct: 121 NQEPCLMRGVYYKNMKWQAAIKVEKKQIHLGTFSSQEEAARLYDRAAFMCGREPNFELSE 180

Query: 219 EEKKELRKFNWDEFLAMTRHAITNRKQK-RLSPESKKSKLPSPGNDDSNKRHDE 249
           E  +EL++ +W+EFL  TR  ITN+K K R+  E  K     P   +  ++  +
Sbjct: 181 EVIRELKQQSWEEFLNCTRRTITNKKPKSRIEHEDTKINASMPHQPEEEEQDSD 224

[Close]

BLAST of Lag0033139 vs. TAIR 10
Match: AT4G13040.3 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 148.3 bits (373), Expect = 8.8e-36
Identity = 102/234 (43.59%), Postives = 131/234 (55.98%), Query Frame = 0


Query: 39  MVSLRRRKLLGLCTGKGSFVAPVSKFSENLTAEDHV-----------------HCTNFVS 98
           MVSLRRR+LLGLC G   +V P+      LTAE+ +                      V 
Sbjct: 21  MVSLRRRRLLGLCCGPNGYVTPL----PFLTAEEMITGIPNPNARAAYNPGPAETVTTVI 80

Query: 99  VHPICSDEVNKIKENPIANIEPEPSRVSVL--DTSKEKVDEPIADLPVKRRKRHRRKNFP 158
           V     +E ++   +   +   + S +S +  D+   K   P      KRRK+HRRK   
Sbjct: 81  VEKKAIEERSRRTRSKHMHFRSDYSDISPVNSDSISPKYQPP------KRRKQHRRKRVH 140

Query: 159 D-EP---RGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPE 218
           + EP   RGVY+KNMKWQAAIKV+KKQIHLGT  SQEEAA LYDRAAFMCGREPNFEL E
Sbjct: 141 NQEPCLMRGVYYKNMKWQAAIKVEKKQIHLGTFSSQEEAARLYDRAAFMCGREPNFELSE 200

Query: 219 EEKKELRKFNWDEFLAMTRHAITNRKQK-RLSPESKKSKLPSPGNDDSNKRHDE 249
           E  +EL++ +W+EFL  TR  ITN+K K R+  E  K     P   +  ++  +
Sbjct: 201 EVIRELKQQSWEEFLNCTRRTITNKKPKSRIEHEDTKINASMPHQPEEEEQDSD 244

[Close]

BLAST of Lag0033139 vs. TAIR 10
Match: AT4G13040.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 141.0 bits (354), Expect = 1.4e-33
Identity = 78/132 (59.09%), Postives = 94/132 (71.21%), Query Frame = 0


Query: 122 IADLPVKRRKRHRRKNFPD-EP---RGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHL 181
           I+D P KRRK+HRRK   + EP   RGVY+KNMKWQAAIKV+KKQIHLGT  SQEEAA L
Sbjct: 37  ISDQPPKRRKQHRRKRVHNQEPCLMRGVYYKNMKWQAAIKVEKKQIHLGTFSSQEEAARL 96

Query: 182 YDRAAFMCGREPNFELPEEEKKELRKFNWDEFLAMTRHAITNRKQK-RLSPESKKSKLPS 241
           YDRAAFMCGREPNFEL EE  +EL++ +W+EFL  TR  ITN+K K R+  E  K     
Sbjct: 97  YDRAAFMCGREPNFELSEEVIRELKQQSWEEFLNCTRRTITNKKPKSRIEHEDTKINASM 156

Query: 242 PGNDDSNKRHDE 249
           P   +  ++  +
Sbjct: 157 PHQPEEEEQDSD 168

The following BLAST results are available for this feature:

BLAST of Lag0033139 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887390.1	2.0e-106	88.19	ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Beni...	[more]
XP_011651656.1	2.7e-103	85.47	ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucu...	[more]
XP_022159538.1	2.0e-98	81.39	ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Momo...	[more]
XP_008460376.1	5.8e-98	81.40	PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isofo...	[more]
XP_008460375.1	7.6e-98	83.84	PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isofo...	[more]

BLAST of Lag0033139 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56XP9	1.2e-34	43.59	Ethylene-responsive transcription factor-like protein At4g13040 OS=Arabidopsis t...	[more]

BLAST of Lag0033139 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCE7	1.3e-103	85.47	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G630280 PE=...	[more]
A0A6J1DZ33	9.7e-99	81.39	ethylene-responsive transcription factor-like protein At4g13040 isoform X1 OS=Mo...	[more]
A0A1S3CCT4	2.8e-98	81.40	ethylene-responsive transcription factor-like protein At4g13040 isoform X2 OS=Cu...	[more]
A0A1S3CCB8	3.7e-98	83.84	ethylene-responsive transcription factor-like protein At4g13040 isoform X1 OS=Cu...	[more]
A0A6J1ESB0	1.8e-97	82.82	ethylene-responsive transcription factor-like protein At4g13040 isoform X1 OS=Cu...	[more]

BLAST of Lag0033139 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13040.1	8.8e-36	43.59	Integrase-type DNA-binding superfamily protein	[more]
AT4G13040.3	8.8e-36	43.59	Integrase-type DNA-binding superfamily protein	[more]
AT4G13040.2	1.4e-33	59.09	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 143..198 e-value: 7.3E-4 score: 19.3
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 143..184 e-value: 7.7E-5 score: 22.9
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 143..193 e-value: 7.1E-8 score: 34.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..253
None	No IPR available	PANTHER	PTHR32467:SF4	OS02G0499000 PROTEIN	coord: 39..255
None	No IPR available	PANTHER	PTHR32467	AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR	coord: 39..255
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 143..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0033139.1	Lag0033139.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity