Lag0033129 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCAGCCTTGACTCCAAAGACAACCCTTATGTTCAGTATTCCTCTGCTTCCGCATCCCCAAATGGGAAAAGTTTGTCTTCTCCTGCTTTGCTTTTAATGTGTTTGTTATAATTCCTCTGTGAATGCTGATGCTCTCTCTTTTTGCTGATGTCCAATAGGTAAGATGCGGGGACTGTTGGATCGGTGCGGGGAGAGGTTTGAAAATAACACCAGGTGCTTAGAGGCTGTAGCGGGTAGCGTCTGGAATCATTGTCAGTTCTTTCCTCGATTCAATTTTCTTTCCTGAATGTGTTGGTTTCTGTGAATCTAATATGAAACCCGTTGCTTCACTTTGATATTGAAATAAGATTTAGTCCTCTCCATCTCTTTAATATGATTGGTAAAGCTTTCAATGAATTGGTTCCAAACAATCAATAGTGTTTCTTGCTGTAAAGAAATGGTTTCAGGTTTCCCTCTAAGTTATCATTGATTCCAAACAAGCTATTATATTTAGCTCTCTCAATCTCTTGCTAATATGATTGGTATAGCTTTCAATCAATTGGTTTCAAACACAAACGAGTTTCTTTCTGTAAAGAAATGGTTTCAGGTTTCCGTTTTAAGTTGTCATATTGATTACTTCAAAGATCAAATGACATGTTACAAGTTAAAACAAAACCAACTTTATTTTGCGAGGCTTTGTTCCGTTCCTTTTGGTCCCTTCTAGAATAATGAAATTGGGTCAACTTGAGCACAGTTCAATAGGTTAACACATATGTCCAAGACCAAAAGGTCAGAGGTTCGACTCCCCACCCTCACATGCTATTGAACTAAAAAAAATATGATAACGAACTCTGCACTTTTATTCATGAATGACGTTTTCTCGGGCTTTTTAGCTTCTAACCTGCAATATATGTTTTCCCAACAGTGAAACTTAGTTCTAGTGTCACTGATGCGGCCATGGTCAGGCTTCGTCAAGGGACGAAGTTACTTACAGAAGGTGGCTATGAAAAACTATTCCAGCAGACGTTTGGTTTTGTTGATGGAGACAAATACTTGGATTCCTTTGCTTGCTATCTGAGCACTTCCTCTGGGCCTGTAAATGGGACTCTGTACATATCCACAAAAAGAGTGGCCTTCTATAGTGAGTTTCCTCTTTGTTCTAATCCATCTTCTGTCCAGCCACAGTTGACGCATTACAAGGTATGTCTTATCCATTATTCTTGAAGATATTTTCCTCAGATGAATCTCAAATAGGAGTAGGATACTTAGGCCCCGTTTGATAACCATTTGGTTTTTGGTTTTTGGTTTTTGAAAATTAAGCTTATACACACATAGTTCCACTCATAAGTTCTTGGTTTTAGTATTAATCTTCTACCTTGTTTTCCAAAACCAAGTCCAATTTTGGAAACAAAAAAAAGTAGTTTTCAAAAACTTGTTTTTGTTTTTAAAATTTGGCTAGGAATTCAAATGCAACCTTAATTAGGATGAAAGCCATGGTAGGGAAGTTAGGAGAAAACAAGCATAATTTTCAAAAACCAAATGGTTATCAAACGGGACCTTAGCTGTTTACTATTGATAAGCAATTGGTAGAGCTCATTTAGATATTGAAGACAAAATAGAACGGATACAAGACTACTCATATGTTTGAGAGGTCTGAGACTCTCCACGAAACAGTACTACTGGCTCTTAACTCTCTCTGTTCCTATCCCCACTTACATTATAGTTTTCTCATCTAACTCCTGGTGAGGGCCCTGCTGCCTTCACTTCCAAAAGATTCTCTATTACAGCTGACCAATTTTCTCTCCCTCTAACTTCCATTTGTATTTCCCGCCCTTTCTTCTTCGAATCCGTGATGTGCATAGGTGGCCTCTTGAGCAAACTAGTTACCCCGCCTTTTTCTCTTAGTTTACGATGAAGAGATAGTTATTAACTTGTTGGTAGCCAAGTTTTGTCTATAAAATTGTTCTTTGAACTTGCTCTAGTATGATTATCTTTTATGTTTTTTCAGAATTTTAAGCATGGTGGAACTGCAGTTTGGGAAATAATTGTATGAAGTATTGCAACAGCAGTTAATCACAGTTTCACATGGCTTCTCCTGTGAAATTCAAGTCCATTAAAGTTCAAGTCAACCATTAAATTGATGGGTTCATAATCTCTCTCAATTGTATAACTCACACAAATAATAGTTGACTCTCACTCACTATTTGGTGAGGATTATGAGACTGAAAAAAAGCATAGTATATTAGGGATTAGAACTCTAATGGAATGGTATTATTCTTTCTGGTTTCCACACTCTTCATTAGGAAGTATATGAGCCCATAATTTAATGCCATTTAATAAACCCATTAAATAGACTAAAATAATTGTCCTTTATTTGTTACCCACTATGAATTAGTTAATAAATTGGGCACCATAAGATCACTGACAATAGATGGAGAAACTGAAAATGTAAGGGTGCAGTGTCTGGTCTGCCTGTAGGATACCACTGATGGATTGTCAGTCCACAGAAACTATAAGCTGATATGCAAGAACATGTTCTTGAGATTTCAAGAATAATAAATGAAACCATTTCAAGAGTTAAAGAAAAGGCTGCAGCTTTATAAGGCTCTTTCTTGGACATCCATCAATTAATACATCCTGAACAGGGAGAGACCCCCCCCCCCCCAAAAAAAAAAAAAAGAAAAAAATCTTATCTTCAACTAGGCCAAGAAGACTCTCTGCAATCTTTCTAATGACATCTCTTGATGATTATTGAAAAGAAAGTTTAGTGAAATGTGTTTCTCCTTATCGTTCGGTCCCTTTATCACTAGTCAGTGTGTAGAAATAACTCGGTTTTATGCTTACTATCTCATAGGGCTCAAATACTTCTACTAAAGTCAACGTTTGCACTAAGAATCTCCTGTCTCCATTTTAAATATTTGCTTGAAGTATTGTTTCTATTTAGTAGTATACTTAGTGTTCGATATAGACCTATATTGACTTTGTATATCAATTGTGCTAACAAGTGTCCGATACGTGTCCAACAAATGTCAGAGTGCGTGTCGGACATGAACAGAACACGCTAGCCAAACTAAAGTGTATGTGCTTCTTAGTCTATAACAATATCAGGCTTAAAAAAAGCCACTCTGATCTTCAAAACTATGCTTGTGTTGCTACATGATCTTGAATTCTATCCCCTTCTTAAATGATTGGTATCTGCATTCTCTTGAGTAGAACCAAAACGAATCACCAAGTTTCGTCGAGTTTCTTGTCCTTTCTCCATCTTTCTCGCTCGAGTTTTCAACTATGGATCAAGATCTTCTGTTAATTTCTTTAGTTGGGTTCTTTCTCATGACTGTGATGAATATATGTAGGTGGTGATAGCAGTTGATCAGTTGGGGAAAATCAATGCTTCTTCAAACCTTAAGGACCCCTCACAAAAGTACATCCAAATAATCACGAGGGACTTTCATGAATTCTGGTTCATGGGATTCATATCATATGACATGGCTGTCAAGACTTTAACTGATGCATTGCAGCGATCCCGTGCCTAG ATGAGCAGCCTTGACTCCAAAGACAACCCTTATGTTCAGTATTCCTCTGCTTCCGCATCCCCAAATGGGAAAAGTAAGATGCGGGGACTGTTGGATCGGTGCGGGGAGAGGTTTGAAAATAACACCAGGTGCTTAGAGGCTGTAGCGGGTAGCGTCTGGAATCATTTGAAACTTAGTTCTAGTGTCACTGATGCGGCCATGGTCAGGCTTCGTCAAGGGACGAAGTTACTTACAGAAGGTGGCTATGAAAAACTATTCCAGCAGACGTTTGGTTTTGTTGATGGAGACAAATACTTGGATTCCTTTGCTTGCTATCTGAGCACTTCCTCTGGGCCTGTAAATGGGACTCTGTACATATCCACAAAAAGAGTGGCCTTCTATAGTGAGTTTCCTCTTTGTTCTAATCCATCTTCTGTCCAGCCACAGTTGACGCATTACAAGGTGGTGATAGCAGTTGATCAGTTGGGGAAAATCAATGCTTCTTCAAACCTTAAGGACCCCTCACAAAAGTACATCCAAATAATCACGAGGGACTTTCATGAATTCTGGTTCATGGGATTCATATCATATGACATGGCTGTCAAGACTTTAACTGATGCATTGCAGCGATCCCGTGCCTAG ATGAGCAGCCTTGACTCCAAAGACAACCCTTATGTTCAGTATTCCTCTGCTTCCGCATCCCCAAATGGGAAAAGTAAGATGCGGGGACTGTTGGATCGGTGCGGGGAGAGGTTTGAAAATAACACCAGGTGCTTAGAGGCTGTAGCGGGTAGCGTCTGGAATCATTTGAAACTTAGTTCTAGTGTCACTGATGCGGCCATGGTCAGGCTTCGTCAAGGGACGAAGTTACTTACAGAAGGTGGCTATGAAAAACTATTCCAGCAGACGTTTGGTTTTGTTGATGGAGACAAATACTTGGATTCCTTTGCTTGCTATCTGAGCACTTCCTCTGGGCCTGTAAATGGGACTCTGTACATATCCACAAAAAGAGTGGCCTTCTATAGTGAGTTTCCTCTTTGTTCTAATCCATCTTCTGTCCAGCCACAGTTGACGCATTACAAGGTGGTGATAGCAGTTGATCAGTTGGGGAAAATCAATGCTTCTTCAAACCTTAAGGACCCCTCACAAAAGTACATCCAAATAATCACGAGGGACTTTCATGAATTCTGGTTCATGGGATTCATATCATATGACATGGCTGTCAAGACTTTAACTGATGCATTGCAGCGATCCCGTGCCTAG MSSLDSKDNPYVQYSSASASPNGKSKMRGLLDRCGERFENNTRCLEAVAGSVWNHLKLSSSVTDAAMVRLRQGTKLLTEGGYEKLFQQTFGFVDGDKYLDSFACYLSTSSGPVNGTLYISTKRVAFYSEFPLCSNPSSVQPQLTHYKVVIAVDQLGKINASSNLKDPSQKYIQIITRDFHEFWFMGFISYDMAVKTLTDALQRSRA Homology
BLAST of Lag0033129 vs. NCBI nr
Match: XP_038887655.1 (GEM-like protein 2 isoform X2 [Benincasa hispida]) HSP 1 Score: 330.5 bits (846), Expect = 1.0e-86 Identity = 163/206 (79.13%), Postives = 180/206 (87.38%), Query Frame = 0
BLAST of Lag0033129 vs. NCBI nr
Match: XP_038887653.1 (GEM-like protein 2 isoform X1 [Benincasa hispida] >XP_038887654.1 GEM-like protein 2 isoform X1 [Benincasa hispida]) HSP 1 Score: 328.2 bits (840), Expect = 5.2e-86 Identity = 164/207 (79.23%), Postives = 181/207 (87.44%), Query Frame = 0
BLAST of Lag0033129 vs. NCBI nr
Match: XP_022159858.1 (GEM-like protein 2 [Momordica charantia]) HSP 1 Score: 311.6 bits (797), Expect = 5.0e-81 Identity = 155/203 (76.35%), Postives = 173/203 (85.22%), Query Frame = 0
BLAST of Lag0033129 vs. NCBI nr
Match: XP_008460398.1 (PREDICTED: GEM-like protein 2 isoform X2 [Cucumis melo]) HSP 1 Score: 308.9 bits (790), Expect = 3.3e-80 Identity = 155/203 (76.35%), Postives = 173/203 (85.22%), Query Frame = 0
BLAST of Lag0033129 vs. NCBI nr
Match: XP_008460396.1 (PREDICTED: GEM-like protein 2 isoform X1 [Cucumis melo] >XP_008460397.1 PREDICTED: GEM-like protein 2 isoform X1 [Cucumis melo]) HSP 1 Score: 293.9 bits (751), Expect = 1.1e-75 Identity = 155/233 (66.52%), Postives = 173/233 (74.25%), Query Frame = 0
BLAST of Lag0033129 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 1.6e-45 Identity = 94/202 (46.53%), Postives = 140/202 (69.31%), Query Frame = 0
BLAST of Lag0033129 vs. ExPASy Swiss-Prot
Match: Q8S8F8 (GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.3e-44 Identity = 94/205 (45.85%), Postives = 138/205 (67.32%), Query Frame = 0
BLAST of Lag0033129 vs. ExPASy Swiss-Prot
Match: Q9SE96 (GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.5e-43 Identity = 91/201 (45.27%), Postives = 136/201 (67.66%), Query Frame = 0
BLAST of Lag0033129 vs. ExPASy Swiss-Prot
Match: Q9M063 (Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV=2) HSP 1 Score: 148.7 bits (374), Expect = 7.4e-35 Identity = 88/206 (42.72%), Postives = 123/206 (59.71%), Query Frame = 0
BLAST of Lag0033129 vs. ExPASy Swiss-Prot
Match: Q9LYV6 (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 7.2e-30 Identity = 70/188 (37.23%), Postives = 109/188 (57.98%), Query Frame = 0
BLAST of Lag0033129 vs. ExPASy TrEMBL
Match: A0A6J1E018 (GEM-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111026148 PE=3 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 2.4e-81 Identity = 155/203 (76.35%), Postives = 173/203 (85.22%), Query Frame = 0
BLAST of Lag0033129 vs. ExPASy TrEMBL
Match: A0A1S3CCD7 (GEM-like protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 1.6e-80 Identity = 155/203 (76.35%), Postives = 173/203 (85.22%), Query Frame = 0
BLAST of Lag0033129 vs. ExPASy TrEMBL
Match: A0A1S3CCH4 (GEM-like protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 5.2e-76 Identity = 155/233 (66.52%), Postives = 173/233 (74.25%), Query Frame = 0
BLAST of Lag0033129 vs. ExPASy TrEMBL
Match: A0A1S3CCV4 (GEM-like protein 2 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 3.5e-72 Identity = 139/181 (76.80%), Postives = 155/181 (85.64%), Query Frame = 0
BLAST of Lag0033129 vs. ExPASy TrEMBL
Match: A0A6J1DUB7 (GEM-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111023171 PE=3 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 1.7e-58 Identity = 119/199 (59.80%), Postives = 146/199 (73.37%), Query Frame = 0
BLAST of Lag0033129 vs. TAIR 10
Match: AT4G01600.1 (GRAM domain family protein ) HSP 1 Score: 184.1 bits (466), Expect = 1.1e-46 Identity = 94/202 (46.53%), Postives = 140/202 (69.31%), Query Frame = 0
BLAST of Lag0033129 vs. TAIR 10
Match: AT2G22475.1 (GRAM domain family protein ) HSP 1 Score: 181.0 bits (458), Expect = 9.5e-46 Identity = 94/205 (45.85%), Postives = 138/205 (67.32%), Query Frame = 0
BLAST of Lag0033129 vs. TAIR 10
Match: AT1G28200.1 (FH interacting protein 1 ) HSP 1 Score: 177.6 bits (449), Expect = 1.1e-44 Identity = 91/201 (45.27%), Postives = 136/201 (67.66%), Query Frame = 0
BLAST of Lag0033129 vs. TAIR 10
Match: AT4G01600.2 (GRAM domain family protein ) HSP 1 Score: 174.1 bits (440), Expect = 1.2e-43 Identity = 92/202 (45.54%), Postives = 137/202 (67.82%), Query Frame = 0
BLAST of Lag0033129 vs. TAIR 10
Match: AT4G40100.1 (GRAM domain family protein ) HSP 1 Score: 133.3 bits (334), Expect = 2.3e-31 Identity = 83/206 (40.29%), Postives = 113/206 (54.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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