Lag0032973 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0032973
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionBAX inhibitor 1
Locationchr11: 39388525 .. 39391193 (+)
RNA-Seq ExpressionLag0032973
SyntenyLag0032973
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAAGCTTTTAGAGTTTGGACGAAGAGCCCTCTTCTACGTTAGAGTCCTCTCCGGCTATGAAGAGCGGCGGATTCGATCGTTTAGGTTGGAGGTCGAAAAGCGTCTCAAGCAGGTACTTGGGGTTCGATCTTTCGGTTTTTGTTCTGATTGTGCAATTTCTGTTACTGGGTTTGAGTTTTAAGCTTTGGGTTATTGTTCTATCATGGTGGTTTTGGCTTTTGAAAGGATGGAGCTGGTCATCATGTACAGTGACAATTTGCACCCAATGAGGGAAAATGTAAATTTCTGAGCTATTTTGTGCTGGGAAATAAGAAATTTACCTCTTTGGAGGATTTTTTTTTTATTTGAGTGATTAGGGAACAGAGAGGAGTTATATTGAGGCAGCTGAAAATTTCAGCTGTGAAAACTGAGTTTAGGGTGAGTGACAGGAAATGTAACCAGAGTTCAACCACAGTGGGGGTCGGGATTTGAACCTCTAACCTTTCGATCGAGGGTGTAATGTCTAGAGTTGAGTTATGCTTAGGTGATAGGAAATGTAATTTCTTCACCACTATCACTATCTTCATAGGTTGAGATTTTGTTCAGTGAACTTCTTATTAACTATTTCTCCATTGCCATTTTTGGGATTTCATTGCCACTTGATGAAGTCGTTGTTATAGAATTTGGCATTTTGTACTGAAGGTTTAAAGTATCAGGATATATTTTTGTTGGTTTGATCTATGTTTTTCTTAGTCATTAGGCTAATTTCTCATGTCTTTATAGTGAAGTCACGAATATGGGTTTCTTTGTAAATGCAACTTCATTATTATAAGCCATTTAAGAATTGAATCAGCCCACATTTGGAAGTAATGGTTTCGCTCTGGGCTTGGTCTTTCCTTTCCTTCATCCCTCTTAAGATTTGGAGAAATGGGTTTCAAGGGGTTATCTTTTGCTTCTTTTGTTTATAGGATGAGACAAATTACTTATGGTAGAGGTTTGGGGCACCTTAACTTGTATGGTTTGGATAGAAAACTGAGATGGCTTGACATGGGTTTCTTGGAATCTTCACAGAGGAACAGAGGAGCTCTGCTGTTGTCCATAATAAATTATCTGACTTCTTCGATTTTGTTAAAACTATTTGAAGACGCCTGCTGAATTATTCAAACCTTTACTTTGATCAAGATTTCATTATCGTAATGTGGATATTTAAGTTTTTGTGTGTAAGGAGCTACATTATTGGGTGTTTGTTTAAGCATTAAGTTGAAAATGTGTGGATGATATACTTTTTTCTAATTGTTTAGAAGTTTGGATTTCTTCTTCTTTTGCATTGCTTTAGCTTAGTTCATGCCTTGCATTGGGCCAAAAAATAGAAAAAAGACTATCGAGCACTCATGATATTGGATGTTCAAATATTCAACTTGTTTGCCAACAAATTTTATACATTGTAATGGTGATTTACCCCTTGCCAGGCTGAGGAAAGAAAAGCTGCCATAAGAAAGATACCAGAACAAGCTATCTTAGGAGAAGTTCGTCGTATGGTTGAGGAGATGCAAGCTCTAAATAAGAAGTTAGAGGAAACGGTAAGTTTTACTTCGCTGTAGAGACGTTTCTTAACTGATTAATCCATTCATGATGAAAAAAGGAAAAGGAAAAAGGACGTTCTTCTTATTTTGTAAGAAAAAAACCTTAAAGAGATCAGCAAATATATATCTGTCTAATCTTTAAAGAGCTTGCCATATTCATGATCTGTCAACATCTGCCTTGCAAGATTGAATTAAGACTAGACTCTTGTTTAATTATGTCCAAGGTTACCTGCTTCTTTGGGTTTACATGTCACTTCATGTTTCAGCTTTGGCTTTTTTTCTGTCAAGATTGGTTATCAAGTTCCCTTTTACCACCATAAGGTTTAAGCATTTTTCATCTTGCTGTTATCAAAGGGATTTTTTCACATGCTCTTGAAAAACAAAAAGAAGGGATTTCAAGAAGAAATGCAGATTGTGAGATTCTACCTTTTCTTTCTATGAGATATGGGGATGTGAATGGTATTCAAATGAATTTGAGCGCTCACTTAAGTTATTTCTAGTTTTGACCGGTGAGTAATGCTTGGTATAAGCGTTTTCCGAGTATAAGAGTTAATTCAGTAGTATATCAGTAGTCACGTGGGATCGAGTTTGTCAATGCGGACAGTCCTTAACTCCTTATGAATAAGGGAAGATGAGTGTGAGAGAGGTAGACATCGGTAGAGAATTGTACGACAGGGAGACCGGTCCCTCGAGAGGCACTGTCATGTGTCATCCTTCTTATTTTCCTTTTCTTTTTCTTTAGTAGCAATATACAACATTCCTCATAATAAAACTTCCTACAAATACAACTAAATTCACCCCTAATCTCTAAAGTAACAGCATCCATTTCTTCTTTGGAGTTTAAGAAAACTGAGAATACATGCAGGAGTCTGCCATTGAAGAGTACTTCAAGCCAATTGACAAAGAAGCAGAGTCATTAATGAAAATGCAACTTGAAGGAGAAGAGAGAACAATGAAGAACATGGTTAAAGTCATGCAACAACAGGCTTTGTTTGAAAAAGCTGAGGCAGGTAAAGTTACCAGTACCCTTCAAACTGACAAAAATCAACACAATCAAAATCTTGCATCTGACACAACCCCTCAAAAAACTCAGTTGAGGTGA

mRNA sequence

ATGGACAAGCTTTTAGAGTTTGGACGAAGAGCCCTCTTCTACGTTAGAGTCCTCTCCGGCTATGAAGAGCGGCGGATTCGATCGTTTAGGTTGGAGGTCGAAAAGCGTCTCAAGCAGGCTGAGGAAAGAAAAGCTGCCATAAGAAAGATACCAGAACAAGCTATCTTAGGAGAAGTTCGTCGTATGGTTGAGGAGATGCAAGCTCTAAATAAGAAGTTAGAGGAAACGGAGTCTGCCATTGAAGAGTACTTCAAGCCAATTGACAAAGAAGCAGAGTCATTAATGAAAATGCAACTTGAAGGAGAAGAGAGAACAATGAAGAACATGGTTAAAGTCATGCAACAACAGGCTTTGTTTGAAAAAGCTGAGGCAGGTAAAGTTACCAGTACCCTTCAAACTGACAAAAATCAACACAATCAAAATCTTGCATCTGACACAACCCCTCAAAAAACTCAGTTGAGGTGA

Coding sequence (CDS)

ATGGACAAGCTTTTAGAGTTTGGACGAAGAGCCCTCTTCTACGTTAGAGTCCTCTCCGGCTATGAAGAGCGGCGGATTCGATCGTTTAGGTTGGAGGTCGAAAAGCGTCTCAAGCAGGCTGAGGAAAGAAAAGCTGCCATAAGAAAGATACCAGAACAAGCTATCTTAGGAGAAGTTCGTCGTATGGTTGAGGAGATGCAAGCTCTAAATAAGAAGTTAGAGGAAACGGAGTCTGCCATTGAAGAGTACTTCAAGCCAATTGACAAAGAAGCAGAGTCATTAATGAAAATGCAACTTGAAGGAGAAGAGAGAACAATGAAGAACATGGTTAAAGTCATGCAACAACAGGCTTTGTTTGAAAAAGCTGAGGCAGGTAAAGTTACCAGTACCCTTCAAACTGACAAAAATCAACACAATCAAAATCTTGCATCTGACACAACCCCTCAAAAAACTCAGTTGAGGTGA

Protein sequence

MDKLLEFGRRALFYVRVLSGYEERRIRSFRLEVEKRLKQAEERKAAIRKIPEQAILGEVRRMVEEMQALNKKLEETESAIEEYFKPIDKEAESLMKMQLEGEERTMKNMVKVMQQQALFEKAEAGKVTSTLQTDKNQHNQNLASDTTPQKTQLR
Homology
[Close]
BLAST of Lag0032973 vs. NCBI nr
Match: XP_038886906.1 (uncharacterized protein LOC120077104 [Benincasa hispida] >XP_038886907.1 uncharacterized protein LOC120077104 [Benincasa hispida])

HSP 1 Score: 260.8 bits (665), Expect = 7.6e-66
Identity = 144/151 (95.36%), Postives = 148/151 (98.01%), Query Frame = 0 

Query: 1   MDKLLEFGRRALFYVRVLSGYEERRIRSFRLEVEKRLKQAEERKAAIRKIPEQAILGEVR 60
           MDKLLEFGRRALFYVRVLSGYEERRIRSFRLE+EKRLKQAEERKAAIRKIPEQAILGEVR
Sbjct: 1   MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEERKAAIRKIPEQAILGEVR 60

Query: 61  RMVEEMQALNKKLEETESAIEEYFKPIDKEAESLMKMQLEGEERTMKNMVKVMQQQALFE 120
           RMVEEMQ LNKKLEETESAIEEYFKPIDKEAE+LMK+QLEGEERTMK+MVKVMQQQALFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKIQLEGEERTMKDMVKVMQQQALFE 120

Query: 121 KAEAGKVTSTLQTDKNQHNQNLASDTTPQKT 152
           KAEAGKVTSTLQTDKNQ  QNLASDTTPQKT
Sbjct: 121 KAEAGKVTSTLQTDKNQQTQNLASDTTPQKT 151

[Close]
BLAST of Lag0032973 vs. NCBI nr
Match: XP_022131261.1 (uncharacterized protein LOC111004517 [Momordica charantia] >XP_022131262.1 uncharacterized protein LOC111004517 [Momordica charantia])

HSP 1 Score: 259.2 bits (661), Expect = 2.2e-65
Identity = 145/154 (94.16%), Postives = 150/154 (97.40%), Query Frame = 0 

Query: 1   MDKLLEFGRRALFYVRVLSGYEERRIRSFRLEVEKRLKQAEERKAAIRKIPEQAILGEVR 60
           MDKLLEFGRRALFYVRVLSGYEERRIRSFRLE+EKRLKQAEE+KAA+RKIPEQAILGEVR
Sbjct: 1   MDKLLEFGRRALFYVRVLSGYEERRIRSFRLELEKRLKQAEEKKAAMRKIPEQAILGEVR 60

Query: 61  RMVEEMQALNKKLEETESAIEEYFKPIDKEAESLMKMQLEGEERTMKNMVKVMQQQALFE 120
           RMVEEMQ LNKKLEETESAIEEYFKPIDKEAE+LMKMQLEGEER MK+MVKVMQQQALFE
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEAEALMKMQLEGEERKMKDMVKVMQQQALFE 120

Query: 121 KAEAGKV-TSTLQTDKNQHNQNLASDTTPQKTQL 154
           KAEAGKV TSTLQTDKNQHNQNLASD TPQKTQL
Sbjct: 121 KAEAGKVTTSTLQTDKNQHNQNLASDKTPQKTQL 154

[Close]
BLAST of Lag0032973 vs. NCBI nr
Match: XP_008465889.1 (PREDICTED: uncharacterized protein LOC103503473 [Cucumis melo])

HSP 1 Score: 244.6 bits (623), Expect = 5.6e-61
Identity = 133/151 (88.08%), Postives = 146/151 (96.69%), Query Frame = 0 

Query: 1   MDKLLEFGRRALFYVRVLSGYEERRIRSFRLEVEKRLKQAEERKAAIRKIPEQAILGEVR 60
           MDKLL+FGRRALFY+RVLSGYEERRIRSFRL ++KRLKQAEERKAAIRK+PEQAILGEVR
Sbjct: 1   MDKLLQFGRRALFYIRVLSGYEERRIRSFRLGLDKRLKQAEERKAAIRKMPEQAILGEVR 60

Query: 61  RMVEEMQALNKKLEETESAIEEYFKPIDKEAESLMKMQLEGEERTMKNMVKVMQQQALFE 120
           RMVEEMQ LNK LEETESAIEEYFKPIDKEAE+LMK+QLEGEER+MK+MVKVMQQQALF+
Sbjct: 61  RMVEEMQTLNKTLEETESAIEEYFKPIDKEAEALMKIQLEGEERSMKDMVKVMQQQALFK 120

Query: 121 KAEAGKVTSTLQTDKNQHNQNLASDTTPQKT 152
           +AEAGKVT+TLQT+KNQ  QNLASDTTPQKT
Sbjct: 121 QAEAGKVTNTLQTEKNQQTQNLASDTTPQKT 151

[Close]
BLAST of Lag0032973 vs. NCBI nr
Match: XP_004148363.1 (uncharacterized protein LOC101210706 [Cucumis sativus] >XP_031737645.1 uncharacterized protein LOC101210706 [Cucumis sativus] >KGN60461.1 hypothetical protein Csa_002633 [Cucumis sativus])

HSP 1 Score: 234.6 bits (597), Expect = 5.8e-58
Identity = 130/152 (85.53%), Postives = 142/152 (93.42%), Query Frame = 0 

Query: 1   MDKLLEFGRRALFYVRVLSGYEERRIRSFRLEVEKRLKQAEERKAAIRKIPEQAILGEVR 60
           MDKLL+FGRRALFYVRVLSGYEERRIRS R +++KRLKQAEERK+AIRK+PEQ ILGEVR
Sbjct: 1   MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVR 60

Query: 61  RMVEEMQALNKKLEETESAIEEYFKPIDKEAESLMKMQLEGEERTMKNMVKVMQQQALFE 120
           RMVEEMQ LNKKLEETE+AIEEYFKPIDKEAE+LMK+QLEGEER M++MVKVMQQQAL E
Sbjct: 61  RMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMVKVMQQQALLE 120

Query: 121 KAEAGKVTS-TLQTDKNQHNQNLASDTTPQKT 152
           KAEAGKVTS  LQT+KNQ  QNLASDTTPQKT
Sbjct: 121 KAEAGKVTSRNLQTEKNQQTQNLASDTTPQKT 152

[Close]
BLAST of Lag0032973 vs. NCBI nr
Match: XP_022996261.1 (uncharacterized protein LOC111491540 [Cucurbita maxima] >XP_022996262.1 uncharacterized protein LOC111491540 [Cucurbita maxima])

HSP 1 Score: 227.3 bits (578), Expect = 9.3e-56
Identity = 125/141 (88.65%), Postives = 133/141 (94.33%), Query Frame = 0 

Query: 1   MDKLLEFGRRALFYVRVLSGYEERRIRSFRLEVEKRLKQAEERKAAIRKIPEQAILGEVR 60
           MDK+LE GRRALFYV+VLSGYEERRIRSFRLE+EKRLK+AEERKAAIRKIPEQAILGEVR
Sbjct: 1   MDKVLELGRRALFYVKVLSGYEERRIRSFRLELEKRLKKAEERKAAIRKIPEQAILGEVR 60

Query: 61  RMVEEMQALNKKLEETESAIEEYFKPIDKEAESLMKMQLEGEERTMKNMVKVMQQQALFE 120
           RMVEEMQ LNKKLEETESAIEEYFKPIDKE E+LM++QLEGEERTMKNMVKVMQQQAL E
Sbjct: 61  RMVEEMQTLNKKLEETESAIEEYFKPIDKEVETLMRVQLEGEERTMKNMVKVMQQQALLE 120

Query: 121 KAEAGKVTSTLQTDKNQHNQN 142
           K EA KV STLQTDKNQ NQ+
Sbjct: 121 KTEADKVGSTLQTDKNQQNQD 141

The following BLAST results are available for this feature:
BLAST of Lag0032973 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038886906.17.6e-6695.36uncharacterized protein LOC120077104 [Benincasa hispida] >XP_038886907.1 unchara... [more]
XP_022131261.12.2e-6594.16uncharacterized protein LOC111004517 [Momordica charantia] >XP_022131262.1 uncha... [more]
XP_008465889.15.6e-6188.08PREDICTED: uncharacterized protein LOC103503473 [Cucumis melo][more]
XP_004148363.15.8e-5885.53uncharacterized protein LOC101210706 [Cucumis sativus] >XP_031737645.1 uncharact... [more]
XP_022996261.19.3e-5688.65uncharacterized protein LOC111491540 [Cucurbita maxima] >XP_022996262.1 uncharac... [more]
BLAST of Lag0032973 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 30..50
NoneNo IPR availableCOILSCoilCoilcoord: 56..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..154
NoneNo IPR availablePANTHERPTHR35749:SF3SUBFAMILY NOT NAMEDcoord: 1..144
NoneNo IPR availablePANTHERPTHR35749OSJNBA0084A10.10 PROTEINcoord: 1..144

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0032973.1Lag0032973.1mRNA