Lag0032956 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0032956
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr11: 39180747 .. 39183741 (+)
RNA-Seq Expression	Lag0032956
Synteny	Lag0032956

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAAGTGTGGGGTGAAGCGCCCGGTTTTGGGGGTTTGGGGACAACGCCCTAGAAGCTTGATTTTGCATAGAGATTAGTTATGTTATGTCTGTTTTTTATTTTGAGCCAAATCTACTAGGGTTGAGGAGTGTCATATATAAACTTTCTTATCCTAAACTGTCATAATCTTTGTAGAATAATACTTGGTTGCAGGTTGCATACCGGTATGTAGGGATCCCTCTACATATCCTGTTAAAATCTAGACAACTAAGAAAGAGAAATGTAGAAAATGAGAACTTTTTTATCTCTCCTAGTTGTCAACATTTTAATGGTGGTATGTAGGGAGGCTTACACATACCGGTATGCAGCCAAATATTTTTCATCTTTGTATCTGTATATGTTTATTCCTCACTAATCGAAATGCTCTCTTCCTCTGCTCGTGGATGTAGCTAACACACCACTAGTGAATCATGTAAAATTTGTGTTGTTTTCTTCTCGTTTCTTTATTCTTTGTTTGTTGATTCGATTACTGTTATAACAATATGTTGCTATTTTCACTAATTCACCCCTTATTTTGTTCTCTCTCTTTCTTAGAACAATTCAAGTTGTGCCTTTGAAGAATGGATTGACTTTATAATTCAAGTGAATGTATAATTTAATTTTTTCATTGACTTTAAGGTTGATTTTCAATTTAGTTTTAAAAGTTTTAACTTCATTGAAGAAATGATTACATGACATTAGTATTCTATATTTTAGTGGGAAGAGGTTTGAGATATAGTTAGATTTAATTACTCATTTTAGACATCAGTCTCTCAGACTTAGCCAAGTCTTATTCTTTTGGATCGAAGTCCTGTTTCTAATTTGTTAGTGTTCATATATTTTTTTTCTTTTTTCTTCATGTTATCTCATTTTGTTCAATAAAAACTCGGTTTCATTCCCTTTTTTTTTTTTTGAAATAATTTCATTCCTTTTTTTTTAAAGGCATATCCAACTCATGAAATTAAATATATACCCACTTCACAGAACTTACCCCAAAGTAAGCCACACTTTAGAAGATCGATCCATTTAAAATACTACCTTCTCGATAACTAGCTACTAGATCAAAAATAGTTTCAAAAACTTTGGCAGGGCTCTGAACTCAAGTTCTCTCTGAAGGAGAAACGAAGTTCATGAGCGATTTGGGATCCTTCAGTGATCATTTGTGGATTGCGCTTCTCCAGTCGCCATGGAGGAAGAAAAGGTGATGAAAGAGATGGGGAAGATGAAACTAACAGAGGCAGAAAAAGAAGGGCTCATGGAGGTGTGGAAGACAATGATATGGACTTAACAGACAAGGACATAGAAAATACAGTGGCTTGCAAAATCCTATCAAACAAAGGAATAAATGTTGAGCACTTACCAAAGATATGGGGCGTAGAAGAGAATGTGCAGTTGAAAAAGACAGGGAAGAATATGTACATCTGCAAGTTTAAGAACAGAAAAACAAAAAGAAGAGTGGGGGATAGGGGGATCAAGGCCTTAGAGTTGAGGTACGTAAATTTCTGGGTTGATTTTCATAACTTACCCGTGGTTTGCCTAAACAGGAAATATGCAATAGCCCTGGCCAACTCTATTGGTGCTTTCGTGAAGATGAATGAAGAAGAGGAGGAAGGTAGAGTTTGGGGGGAGACACTTCGCGTGAAAGTTAAGCTGGAAGCAAACAAGCCTCTGCGTAGAGGAACCAAGGTTAAAGTGGGCTCCATGGCAGAGGAGGAATGGATACCAATAACCATAGAAAAGCTCCCTGACTTCTGCTATCAATGTGGGACAGGTTATGAACAAATGCAAAGAAGACAACAGTGACGAAGAGGATGAGGATGAAAATGCAGCTTACAATATGGAGTATAGAGGTAAAAAAGCAAAAGAGAAAGAAGCCATGGAGGAAAAGAAAGATAGAACCAAAGAAATAGAAGAGAAAACAAAAGAGCTGGCGACTAAGATGGCCGAGGTAGTCGGAATTCCTCCCAGAGAAGAAAGTCGATCGAAAAATGAACAGTGTCAAACGAAGGAGACAGAAGCCTAAAATCCATTATTGCACCTGACACAGAGAGCAGAAGAAAAAGAAAAAATAGCCGTTAAGACACAAAAAAGAGGAAGTAAAAAAGGCTCTGGAAGTGAGGCAAATAGGAAGGAACTAGTGGAATAGAGGATCAAGGAAGCGGTGAGGAAAAGGACAAAGGTCAGACTCAGTGGGCCCTAGGGGGAAAGCAAAGCCAAACTAGAAATCTGGAGAGAGAGAGAGAGAGGGCGAAAGTGGGGAAAAAAGGAAGACCAATTTCAGCAAACGGAAGACAGTAAGAAAGAAAATAATAACCATAAAACTAAAGGGAACCATAGCCCAAGTGGAAAAAACCTTAAAAAATGGAAGAGGCTGGCTAGGAACGAGTCCATGTAACAAAATGAATTCGAAAACCTGGCCAGCCAATCAAAGAAAATACTTGGGCAGAATGAGTAAGACACAAACGATACAGTAAAGAGGGTGAAAATTAATGACTTCGAGTAATTCAGAGGGACATTGGTGGAGACAGGAGAACAGCCCTGTCGGATGCCATGAACCCTCGAGCGATCCGAGCGCTTCGCCACTTAGTGGGGAGCTTCAAACCCCAGCTAGTCTTTTTAATGGAAACCAAATGCGATTCAAAAAGGAGTGAAAGAATTAGAGTTAGCATGATGTTTGAGTTTTGTTTGTGTGTTTCGAGTAACGGTAGAAGTGGAGGCCTAATGCTCATTTGGAACTCTTTTATGAAGGTCAATATAAATTCTTTCTCTGAAGGGCACATTGATGCATCTATTCAAGACAACCGAGGGGATTGGAGATTTACTAGCTTCTATGGCAACCCAGAAACAGAGAAAAGACGGTTTTCTTGGGAGCTCCTTGACAGGTTGTATGAGGAAAATGAGAGGCCTTGGTTGATTGGTGGTGATTTCAATGAGATCTTGTCGGCTGAAGAGAAAAAAAGGAGGAATGGCTAG

mRNA sequence

ATGACCAAGTGTGGGGTGAAGCGCCCGAATAATACTTGGTTGCAGGTTGCATACCGTCGCCATGGAGGAAGAAAAGGTGATGAAAGAGATGGGGAAGATGAAACTAACAGAGGCAGAAAAAGAAGGGCTCATGGAGGTGTGGAAGACAATGATATGGACTTAACAGACAAGGACATAGAAAATACAGTGGCTTGCAAAATCCTATCAAACAAAGGAATAAATGTTGAGCACTTACCAAAGATATGGGGCGTAGAAGAGAATGTGCAGTTGAAAAAGACAGGGAAGAATATGTACATCTGCAAGTTTAAGAACAGAAAAACAAAAAGAAGAGTGGGGGATAGGGGGATCAAGGCCTTAGAGTTGAGGTACGTAAATTTCTGGGTTGATTTTCATAACTTACCCGTGGTTTGCCTAAACAGGAAATATGCAATAGCCCTGGCCAACTCTATTGGTGCTTTCGTGAAGATGAATGAAGAAGAGGAGGAAGGTAGAGTTTGGGGGGAGACACTTCGCGTGAAAGTTAAGCTGGAAGCAAACAAGCCTCTGCGTAGAGGAACCAAGGTTATGAACAAATGCAAAGAAGACAACAGTGACGAAGAGGATGAGGATGAAAATGCAGCTTACAATATGGAGTATAGAGGTAAAAAAGCAAAAGAGAAAGAAGCCATGGAGGAAAAGAAAGATAGAACCAAAGAAATAGAAGAGAAAACAAAAGAGCTGGCGACTAAGATGGCCGAGAGGGACATTGGTGGAGACAGGAGAACAGCCCTGTCGGATGCCATGAACCCTCGAGCGATCCGAGCGCTTCGCCACTTAGTGGGGAGCTTCAAACCCCAGCTAGTCTTTTTAATGGAAACCAAATGCGATTCAAAAAGGAGTGAAAGAATTAGAGTTAGCATGATGTTTGAGTTTTGTTTGTGTGTTTCGAGTAACGGTAGAAGTGGAGGCCTAATGCTCATTTGGAACTCTTTTATGAAGGTCAATATAAATTCTTTCTCTGAAGGGCACATTGATGCATCTATTCAAGACAACCGAGGGGATTGGAGATTTACTAGCTTCTATGGCAACCCAGAAACAGAGAAAAGACGGTTTTCTTGGGAGCTCCTTGACAGGTTGTATGAGGAAAATGAGAGGCCTTGGTTGATTGGTGGTGATTTCAATGAGATCTTGTCGGCTGAAGAGAAAAAAAGGAGGAATGGCTAG

Coding sequence (CDS)

ATGACCAAGTGTGGGGTGAAGCGCCCGAATAATACTTGGTTGCAGGTTGCATACCGTCGCCATGGAGGAAGAAAAGGTGATGAAAGAGATGGGGAAGATGAAACTAACAGAGGCAGAAAAAGAAGGGCTCATGGAGGTGTGGAAGACAATGATATGGACTTAACAGACAAGGACATAGAAAATACAGTGGCTTGCAAAATCCTATCAAACAAAGGAATAAATGTTGAGCACTTACCAAAGATATGGGGCGTAGAAGAGAATGTGCAGTTGAAAAAGACAGGGAAGAATATGTACATCTGCAAGTTTAAGAACAGAAAAACAAAAAGAAGAGTGGGGGATAGGGGGATCAAGGCCTTAGAGTTGAGGTACGTAAATTTCTGGGTTGATTTTCATAACTTACCCGTGGTTTGCCTAAACAGGAAATATGCAATAGCCCTGGCCAACTCTATTGGTGCTTTCGTGAAGATGAATGAAGAAGAGGAGGAAGGTAGAGTTTGGGGGGAGACACTTCGCGTGAAAGTTAAGCTGGAAGCAAACAAGCCTCTGCGTAGAGGAACCAAGGTTATGAACAAATGCAAAGAAGACAACAGTGACGAAGAGGATGAGGATGAAAATGCAGCTTACAATATGGAGTATAGAGGTAAAAAAGCAAAAGAGAAAGAAGCCATGGAGGAAAAGAAAGATAGAACCAAAGAAATAGAAGAGAAAACAAAAGAGCTGGCGACTAAGATGGCCGAGAGGGACATTGGTGGAGACAGGAGAACAGCCCTGTCGGATGCCATGAACCCTCGAGCGATCCGAGCGCTTCGCCACTTAGTGGGGAGCTTCAAACCCCAGCTAGTCTTTTTAATGGAAACCAAATGCGATTCAAAAAGGAGTGAAAGAATTAGAGTTAGCATGATGTTTGAGTTTTGTTTGTGTGTTTCGAGTAACGGTAGAAGTGGAGGCCTAATGCTCATTTGGAACTCTTTTATGAAGGTCAATATAAATTCTTTCTCTGAAGGGCACATTGATGCATCTATTCAAGACAACCGAGGGGATTGGAGATTTACTAGCTTCTATGGCAACCCAGAAACAGAGAAAAGACGGTTTTCTTGGGAGCTCCTTGACAGGTTGTATGAGGAAAATGAGAGGCCTTGGTTGATTGGTGGTGATTTCAATGAGATCTTGTCGGCTGAAGAGAAAAAAAGGAGGAATGGCTAG

Protein sequence

MTKCGVKRPNNTWLQVAYRRHGGRKGDERDGEDETNRGRKRRAHGGVEDNDMDLTDKDIENTVACKILSNKGINVEHLPKIWGVEENVQLKKTGKNMYICKFKNRKTKRRVGDRGIKALELRYVNFWVDFHNLPVVCLNRKYAIALANSIGAFVKMNEEEEEGRVWGETLRVKVKLEANKPLRRGTKVMNKCKEDNSDEEDEDENAAYNMEYRGKKAKEKEAMEEKKDRTKEIEEKTKELATKMAERDIGGDRRTALSDAMNPRAIRALRHLVGSFKPQLVFLMETKCDSKRSERIRVSMMFEFCLCVSSNGRSGGLMLIWNSFMKVNINSFSEGHIDASIQDNRGDWRFTSFYGNPETEKRRFSWELLDRLYEENERPWLIGGDFNEILSAEEKKRRNG

Homology

[Close]

BLAST of Lag0032956 vs. NCBI nr
Match: XP_022157437.1 (uncharacterized protein LOC111024135 [Momordica charantia])

HSP 1 Score: 146.7 bits (369), Expect = 4.2e-31
Identity = 73/134 (54.48%), Postives = 89/134 (66.42%), Query Frame = 0


Query: 262 NPRAIRALRHLVGSFKPQLVFLMETKCDSKRSERIRVSMMFEFCLCVSSNGRSGGLMLIW 321
           NP   R LR+LV   +PQLVFL ETK +     R +  + F+ C+ V+S G+SGGLML+W
Sbjct: 13  NPDTFRTLRNLVRRSQPQLVFLSETKGNPTLEGRAKRELSFDCCVSVASTGKSGGLMLLW 72

Query: 322 NSFMKVNINSFSEGHIDASIQDNRGDWRFTSFYGNPETEKRRFSWELLDRLYEENERPWL 381
           NS   V I S S GHID+ I D  G WRFT FYGNP T KR  SW+LL+RL    + PW+
Sbjct: 73  NSDSNVRIQSMSPGHIDSIITDKYGSWRFTGFYGNPCTYKRSASWKLLERLARMMDLPWI 132

Query: 382 IGGDFNEILSAEEK 396
           IGGDFNEI+S  EK
Sbjct: 133 IGGDFNEIVSMTEK 146

[Close]

BLAST of Lag0032956 vs. NCBI nr
Match: XP_042972796.1 (uncharacterized protein LOC122304603 [Carya illinoinensis])

HSP 1 Score: 136.7 bits (343), Expect = 4.3e-28
Identity = 70/136 (51.47%), Postives = 91/136 (66.91%), Query Frame = 0


Query: 262 NPRAIRALRHLVGSFKPQLVFLMETKCDSKRSERIRVSMMFEFCLCVSSNGRSGGLMLIW 321
           NPR +RAL  LV    P ++FLMETK  S++ ERIRV + FE C  V+S+GR GG+ L+W
Sbjct: 13  NPRGVRALCDLVRREVPAVLFLMETKLTSRQMERIRVRVGFECCFVVNSDGRKGGVALLW 72

Query: 322 NSFMKVNINSFSEGHIDASIQDNRG--DWRFTSFYGNPETEKRRFSWELLDRLYEENERP 381
            + +K++I SFS  HIDA I    G  +W+FT  YG+ E EKR  +W LL  L EE   P
Sbjct: 73  RNEIKLSIKSFSLFHIDAKISGTDGGMEWKFTGLYGHLEIEKREETWSLLRALREEGNIP 132

Query: 382 WLIGGDFNEILSAEEK 396
           WL+ GDFNE+LS +EK
Sbjct: 133 WLVCGDFNEVLSQQEK 148

[Close]

BLAST of Lag0032956 vs. NCBI nr
Match: XP_030970584.1 (uncharacterized protein LOC115990959 [Quercus lobata])

HSP 1 Score: 132.9 bits (333), Expect = 6.2e-27
Identity = 70/136 (51.47%), Postives = 89/136 (65.44%), Query Frame = 0


Query: 262 NPRAIRALRHLVGSFKPQLVFLMETKCDSKRSERIRVSMMFEFCLCVSSNGRSGGLMLIW 321
           NPR++RAL +LV  + P+LVFL ETK   KR ERI+  + F   L V  +GRSGGL L+W
Sbjct: 13  NPRSVRALHNLVQYWAPKLVFLSETKVRKKRMERIKERIGFANGLFVPCHGRSGGLALLW 72

Query: 322 NSFMKVNINSFSEGHIDASIQDNRGD--WRFTSFYGNPETEKRRFSWELLDRLYEENERP 381
                + I SFS  HIDA I +   +  WRFT FYG+P+T  R+ SW+LLD L  +++ P
Sbjct: 73  TRETDLEIKSFSNHHIDAVITEENSNFKWRFTGFYGHPQTHLRQKSWDLLDFLQGQSQLP 132

Query: 382 WLIGGDFNEILSAEEK 396
           W   GDFNEILS EEK
Sbjct: 133 WFCFGDFNEILSMEEK 148

[Close]

BLAST of Lag0032956 vs. NCBI nr
Match: XP_042958101.1 (uncharacterized protein LOC122293641 [Carya illinoinensis])

HSP 1 Score: 131.7 bits (330), Expect = 1.4e-26
Identity = 110/389 (28.28%), Postives = 175/389 (44.99%), Query Frame = 0


Query: 68  LSNKGINVE----HLPKIWGVEENVQLKKTGKNMYICKFKNRKTKRRV------------ 127
           L+++ +N E     + K+W +E  +  K+ G N ++ +++    KR+V            
Sbjct: 45  LNDRSVNREAFKSTMAKVWNLEGWITFKEIGFNKFLIEYQLLSDKRKVLQGRPWSFDWHL 104

Query: 128 -------GDRGIKALELRYVNFWVDFHNLPVVCLNRKYAIALANSIGAFVKMNEEEEEGR 187
                  GD     +  +   FWV  HN+P   +N +    L + IG   K+ E +++G 
Sbjct: 105 ICMKDFEGDLAQNEIIFKTEPFWVQLHNVPFAVMNAEQGEKLGSVIGKVHKV-ETDDQGC 164

Query: 188 VWGETLRVKVKLEANKPLRRG--TKVMNK----------------CKEDNSD-------E 247
            WG  LR++V ++ NKPL RG   KV +K                  +DNS        E
Sbjct: 165 GWGRHLRIRVDVDINKPLPRGKMIKVRDKQCWIYFNKRYGGSSEQSSQDNSSPVQPKAAE 224

Query: 248 EDEDENAAYNMEYRGKKAKEKEAMEEKK-----------DRTKEIEEKTKELATKMAERD 307
             +D +   ++   G+   +   + ++K           D+T    E       K  E  
Sbjct: 225 AQKDNSGWSSLGAEGEATSQNTTVGDQKHGRGLTPTCQADQTWNSSELEASCPAKFHE-- 284

Query: 308 IGGDRRTALSDAMNPRAIRALRHLVGSFKPQLVFLMETKCDSKRSERIRVSMMFEFCLCV 367
            G  ++  +          + R L  +  P LVFL+ETKC S++ E IRV M F+ C  V
Sbjct: 285 -GLSQQENIETKRKEIPHPSSRPLTQTKTPHLVFLIETKCSSEKMETIRVKMGFDNCFAV 344

Query: 368 SSNGRSGGLMLIWNSFMKVNINSFSEGHIDASIQDNRGD--WRFTSFYGNPETEKRRFSW 396
            S GRSGGL L+WNS ++V +++++  HI   ++    D  W  T FYG+  T KR  +W
Sbjct: 345 RSVGRSGGLALLWNSSIEVKVDTYTNWHISVYVKLPNIDKSWLLTGFYGHSNTAKRSETW 404

[Close]

BLAST of Lag0032956 vs. NCBI nr
Match: XP_030970961.1 (uncharacterized protein LOC115991405 [Quercus lobata])

HSP 1 Score: 131.7 bits (330), Expect = 1.4e-26
Identity = 65/135 (48.15%), Postives = 90/135 (66.67%), Query Frame = 0


Query: 262 NPRAIRALRHLVGSFKPQLVFLMETKCDSKRSERIRVSMMFEFCLCVSSNGRSGGLMLIW 321
           NP+++R LR++V  + P  VFL ETK   +  ER ++S+ F   L + S+GRSGGL L+W
Sbjct: 13  NPQSVRVLRNIVQQWDPDFVFLSETKLRVRSMERKKMSIGFTNGLVIPSHGRSGGLALLW 72

Query: 322 NSFMKVNINSFSEGHIDASIQDNRG-DWRFTSFYGNPETEKRRFSWELLDRLYEENERPW 381
              + V++ SFS+ HIDA + ++RG  WR T FYGNPE  +R+ SWELL  L  + + PW
Sbjct: 73  RKEINVDVQSFSDRHIDAIVTEDRGFKWRITGFYGNPEVHRRKESWELLKVLSRKFQLPW 132

Query: 382 LIGGDFNEILSAEEK 396
           L  GDFNEI+S  EK
Sbjct: 133 LCFGDFNEIVSTSEK 147

[Close]

BLAST of Lag0032956 vs. ExPASy TrEMBL
Match: A0A6J1DUG8 (uncharacterized protein LOC111024135 OS=Momordica charantia OX=3673 GN=LOC111024135 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.0e-31
Identity = 73/134 (54.48%), Postives = 89/134 (66.42%), Query Frame = 0


Query: 262 NPRAIRALRHLVGSFKPQLVFLMETKCDSKRSERIRVSMMFEFCLCVSSNGRSGGLMLIW 321
           NP   R LR+LV   +PQLVFL ETK +     R +  + F+ C+ V+S G+SGGLML+W
Sbjct: 13  NPDTFRTLRNLVRRSQPQLVFLSETKGNPTLEGRAKRELSFDCCVSVASTGKSGGLMLLW 72

Query: 322 NSFMKVNINSFSEGHIDASIQDNRGDWRFTSFYGNPETEKRRFSWELLDRLYEENERPWL 381
           NS   V I S S GHID+ I D  G WRFT FYGNP T KR  SW+LL+RL    + PW+
Sbjct: 73  NSDSNVRIQSMSPGHIDSIITDKYGSWRFTGFYGNPCTYKRSASWKLLERLARMMDLPWI 132

Query: 382 IGGDFNEILSAEEK 396
           IGGDFNEI+S  EK
Sbjct: 133 IGGDFNEIVSMTEK 146

[Close]

BLAST of Lag0032956 vs. ExPASy TrEMBL
Match: A0A2N9ESV7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5765 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.2e-29
Identity = 66/136 (48.53%), Postives = 90/136 (66.18%), Query Frame = 0


Query: 262 NPRAIRALRHLVGSFKPQLVFLMETKCDSKRSERIRVSMMFEFCLCVSSNGRSGGLMLIW 321
           NP+AIR LR+L     P ++FL+ETK D KR E++R S+ F++   V S GRSGGL L+W
Sbjct: 415 NPKAIRILRNLAKEKDPVMMFLIETKLDVKRMEKVRASVGFQYVFTVPSKGRSGGLALMW 474

Query: 322 NSFMKVNINSFSEGHIDASI-QDNRGDWRFTSFYGNPETEKRRFSWELLDRLYEENERPW 381
              ++V + +FS+ H+D  +  D    WR T FYG+PE  KR  +W+LL+ L   N+ PW
Sbjct: 475 KDSIEVRVQTFSQHHVDVHVHMDTNSWWRLTGFYGHPEPHKRHETWKLLNHLGSRNQAPW 534

Query: 382 LIGGDFNEILSAEEKK 397
           L  GDFNEILS EEK+
Sbjct: 535 LCMGDFNEILSQEEKR 550

[Close]

BLAST of Lag0032956 vs. ExPASy TrEMBL
Match: A0A2N9EUS3 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10428 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.2e-29
Identity = 66/136 (48.53%), Postives = 90/136 (66.18%), Query Frame = 0


Query: 262 NPRAIRALRHLVGSFKPQLVFLMETKCDSKRSERIRVSMMFEFCLCVSSNGRSGGLMLIW 321
           NP+AIR LR+L     P ++FL+ETK D KR E++R S+ F++   V S GRSGGL L+W
Sbjct: 439 NPKAIRILRNLAKEKDPVMMFLIETKLDVKRMEKVRASVGFQYVFTVPSKGRSGGLALMW 498

Query: 322 NSFMKVNINSFSEGHIDASI-QDNRGDWRFTSFYGNPETEKRRFSWELLDRLYEENERPW 381
              ++V + +FS+ H+D  +  D    WR T FYG+PE  KR  +W+LL+ L   N+ PW
Sbjct: 499 KDSIEVRVQTFSQHHVDVHVHMDTNSWWRLTGFYGHPEPHKRHETWKLLNHLGSRNQAPW 558

Query: 382 LIGGDFNEILSAEEKK 397
           L  GDFNEILS EEK+
Sbjct: 559 LCMGDFNEILSQEEKR 574

[Close]

BLAST of Lag0032956 vs. ExPASy TrEMBL
Match: A0A2N9F4F2 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS9633 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.2e-29
Identity = 66/136 (48.53%), Postives = 90/136 (66.18%), Query Frame = 0


Query: 262 NPRAIRALRHLVGSFKPQLVFLMETKCDSKRSERIRVSMMFEFCLCVSSNGRSGGLMLIW 321
           NP+AIR LR+L     P ++FL+ETK D KR E++R S+ F++   V S GRSGGL L+W
Sbjct: 441 NPKAIRILRNLAKEKDPVMMFLIETKLDVKRMEKVRASVGFQYVFTVPSKGRSGGLALMW 500

Query: 322 NSFMKVNINSFSEGHIDASI-QDNRGDWRFTSFYGNPETEKRRFSWELLDRLYEENERPW 381
              ++V + +FS+ H+D  +  D    WR T FYG+PE  KR  +W+LL+ L   N+ PW
Sbjct: 501 KDSIEVRVQTFSQHHVDVHVHMDTNSWWRLTGFYGHPEPHKRHETWKLLNHLGSRNQAPW 560

Query: 382 LIGGDFNEILSAEEKK 397
           L  GDFNEILS EEK+
Sbjct: 561 LCMGDFNEILSQEEKR 576

[Close]

BLAST of Lag0032956 vs. ExPASy TrEMBL
Match: A0A2N9HE28 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37812 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.2e-29
Identity = 66/136 (48.53%), Postives = 90/136 (66.18%), Query Frame = 0


Query: 262 NPRAIRALRHLVGSFKPQLVFLMETKCDSKRSERIRVSMMFEFCLCVSSNGRSGGLMLIW 321
           NP+AIR LR+L     P ++FL+ETK D KR E++R S+ F++   V S GRSGGL L+W
Sbjct: 440 NPKAIRILRNLAKEKDPVMMFLIETKLDVKRMEKVRASVGFQYVFTVPSKGRSGGLALMW 499

Query: 322 NSFMKVNINSFSEGHIDASI-QDNRGDWRFTSFYGNPETEKRRFSWELLDRLYEENERPW 381
              ++V + +FS+ H+D  +  D    WR T FYG+PE  KR  +W+LL+ L   N+ PW
Sbjct: 500 KDSIEVRVQTFSQHHVDVHVHMDTNSWWRLTGFYGHPEPHKRHETWKLLNHLGSRNQAPW 559

Query: 382 LIGGDFNEILSAEEKK 397
           L  GDFNEILS EEK+
Sbjct: 560 LCMGDFNEILSQEEKR 575

The following BLAST results are available for this feature:

BLAST of Lag0032956 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157437.1	4.2e-31	54.48	uncharacterized protein LOC111024135 [Momordica charantia]	[more]
XP_042972796.1	4.3e-28	51.47	uncharacterized protein LOC122304603 [Carya illinoinensis]	[more]
XP_030970584.1	6.2e-27	51.47	uncharacterized protein LOC115990959 [Quercus lobata]	[more]
XP_042958101.1	1.4e-26	28.28	uncharacterized protein LOC122293641 [Carya illinoinensis]	[more]
XP_030970961.1	1.4e-26	48.15	uncharacterized protein LOC115991405 [Quercus lobata]	[more]

BLAST of Lag0032956 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0032956 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DUG8	2.0e-31	54.48	uncharacterized protein LOC111024135 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A2N9ESV7	4.2e-29	48.53	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5765 PE=4 SV=1	[more]
A0A2N9EUS3	4.2e-29	48.53	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]
A0A2N9F4F2	4.2e-29	48.53	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]
A0A2N9HE28	4.2e-29	48.53	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]

BLAST of Lag0032956 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 209..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 257..400 e-value: 3.5E-17 score: 64.9
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 265..397
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 120..174 e-value: 3.0E-7 score: 30.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0032956.1	Lag0032956.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity