Lag0032923 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0032923
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionpolyadenylate-binding protein RBP47B'
Locationchr11: 38923360 .. 38926988 (-)
RNA-Seq ExpressionLag0032923
SyntenyLag0032923
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACTCTGGCAGGCCAACCAGCGCACCATCAACCAACTACGGTGGAGGAAGTTAGAACACTCTGGATAGGGGATTTGCAGTACTGGGTCGATGAGTCTTACCTTAATTCTTGCTTTGCTCACACTGGCGAGGTTCGTTTGTTTGTTTTCTCTTAAAATTTTAAGTATTTTTAATCGCAGACCCATTAGGACTTTGCTAGTTTTTCAGGTTAATGACATTGTTTATATGAAAACGAGAGGTGTGTAAGTGGATTTGAGGTTTTCTACCTTTCGTTTCTGTAGTGCAAAATATGATTATTTATATAGGTCTGAAATTGGTTAGTTTCCTTCTGGTCTTTGGAAGTGAATTTGGGTGCATAAAATTAGAATGTGTTTGTATTTTTCTATAGCCGTGAGAGCTGGACAATAAGGAGAGTCTCTCTTATGACCTTTCATGCCACTGAGTGCGGATGAGTTCTATGCTTGAGAGCCATGGTAGTTGCAACGCCAATGTATAAAATTATAGTTATTTTCTAGCAGTTGTTATATTATAACGGCCCATACAAATATATTCTTGATGTCTAATAGTTGTTGTTTGTGTGATTGTATTTGATTAAGAGCTTATAACTCTTAGGCACATTCAGAAAGGAAAGTATTCTGTTTTTTTTTGTTGATTATGCCGTTTTTCTATACAGGTAGTTTCAATTAAAATTATTCGCAATAAGATCACTGGACAACCTGAGGGTTATGGGTTTGTGGAGTTTGTATCTCATGCAGCAGCAGAAAGAATTTTGCAGACGTACAATGGGACTCAGATGCCTGGAACTGAGCAAACTTTCAGGTTGAATTGGGCCTCTTTTGGAATTGGAGAAAGGCGCCCTGACGCTGGCCCTGAGCACTCTATTTTTGTGGGGGATCTGGCTCCTGATGTTACAGATTATCTGTTGCAGGAGACCTTTAGAGCGCAATATCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACCGGACGTTCAAAGGGATATGGGTTTGTTAAATTTGCTGATGAAAATGAAAGGAACCGAGCTATGTCAGAAATGAATGGTGTTTATTGCTCAACTAGGCCTATGCGTATTAGTGCAGCAACACCCAAAAAGACTATCGGTGTTCAGCAGCAATATTCTCTAGGTAAAGGTAATGAATATGCAGTACTGCCTTTTTTCCCTTCATTTAGTCACTTCTCACGTTTTCTAATGTTTTTGATCCATGTGGAGCGAGGACCAGCTTTTTTACTATTCATCCAAGTTTCTAGCCCTCCTCGCTTTTCTATTTGCATGAAACTGGTCTGGTTCCTGTCTGTGCTAGGAGCCATAGTCCACAGATATGAAGCTGTTTGGCTTTAAAATTTGAATTTCACCTCTGTCAATGAAAAAATCTCTTTTGGATGTTGTTAAGAATAATTTTTTTTTTTTAACAAACCTAAAGCTAGGAGTTCAATAGGTACGAATGATCATTATGAAATTGTAGCAGATATATTAGCTAAATTAGTGTTTTTAGATCTAAGATGAAAACTTATTAACAGTTATATATATAATGTATATGTCAAAATATATTTTATTTCTTAAATGACTTTTTTTGGATATAGAAGTTCTTCAATGTCAAACATATTTTCTAAATGCCTCGATGGAGGATATCTGCCGTTACCAATGAAAGAGAATTCATTCTTAATGTTATTTTTTCCTTCGCCTAAAGAGAAGATCTTAGGAGGCGATGGAAATTTACTATTTTTAAACTCGTACTGACCAATATGCCTCTTGTCTCAGCAATGTACCCAGTTCCAGCCTACACTACTCCTGTGCCCGTGCTTCCGGCAGATTATGATGCAAATAACACAACTGTAAGTGAAGTGACAGTGTTGCTCTGCTCTTTCTGGTTTCTATGCTTACCTCTCACTACATTGTTATTTATGCAGATCTTTGTTGGTAACTTGGATCCTAATATTACGGAGGAGGAGTTGAAGCAAACGTTTTTGCAGTTTGGTGAGATTGTTTATGTGAAAATTCCTGCTGGGAAAGGCTGTGGTTTTGTACAGTTTGGGACGAGGTATGTTTAGCACGATCAATTTTATTGATGGAAGTTGATTAAATTGCATCTCTTCTTGCTCGTGTTCTTATGCCTTGAAAGAAGGCTGTGAATAAAAATAATGGTCAGGAAGTGGGAGGAGGAATAACATTCTTGTAGGAGGGAAAGTTCTTGTGCATTTACACTTCAAAAATATGTTATCGACTTGACTTCTTATTTCACCATGGACATTTGGACTTGGATTAAGTATGTTCTCCTAATCGTGTCCATGCAGGGCTTCAGCTGAAGAAGCCATTCAAAAGATGCAAGGAAAGATAATTGGTCAACAAGTGGTGCGTACTTCTTGGGGTAGAAATCCGGCTGCCAAGCAGGTAATTGACCTTCTATTGCAGTCCATAACAAATGTTTTACTTTATTTACTAAAACTTTTTTTTTTTCCTTTGTGGATGTGATATGTATTTATGTGGTTTGGTTTATAATTTAATGCTTGTGAGTTTGTTTATAAAACATCAGGTGCCTTGTAAATTTAGCCTGGGAATTTGAAATTTCATCTATAGGAAGAAGGCTTACATTTCATCATGGTAAATGTTTTTATTTTGCATTTTCGTTAAAACACCATGGTATGAAAATAAGGTCTAAAGAAAAGGTCTGAGGACAAGCCCTCAGAAAAGTATAACAGACAAAATCATCTACAAACCTGTACCAGACAATCATTTACAAAGCTATACCAGACACAATGATTTACTAAATCTAATAATAAAAATATTCTACCTCATCGAAAGAAGGTTGTTGTTGTTGTTGTTGTTGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATATTTAAATTTTAATTAATTAATTAATTTGTATATATATTTTTAATATTATTTAAAGGACTTCGAATTTCCATGTTTTGTGTCCTCCCCTTGGTAAAATTGGTCATGTATGTTTATTTCTGTTAGCCTGCTCTCACAATAACCTGTATAATGCTCATCGTGAACTAGAGTTCACTGTATTGAGTAGACTTTGATGAAATTATGATGAATATTTAGGACATGTCTACTTGGGGCCAACAAGTAGATCCGAACCAATGGAGTGCTTACTATGGCTATGGAGGAGCTTATGATGCTTATGGATATGGAGTTGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCGTATCCTCAACAGGTAAGTTTCATTCCTTTTAGATGGTAAGAGTTGTACACTCTTCTGTGGAAGATAATGGGCCGAGTGGTTGCAGCCATTTTCAATTGGAGTCTATTGGTTGAATTCTAATTGTCCTTTCAGGATGCTAAGGCTTAAAATCAGAATATAATGAGTGGGAATCAAGAGCAATATATTTATAGAAAAATGTTGATCTATTCAGAAAATTTATTGCCTTTTCTGATCTTGGAACTATTTGTTTGAACTCTTTTCTTTTAGGTTGACGGTGTACAAGATTTATCTGCTGTAGCTGGTGCTGTCCCTACTGTGGAACAAGGGGAGGAATGGAATGATACGCTGGATACACCAGATGTTGAGTAG

mRNA sequence

ATGGCGACTCTGGCAGGCCAACCAGCGCACCATCAACCAACTACGGTGGAGGAAGTTAGAACACTCTGGATAGGGGATTTGCAGTACTGGGTCGATGAGTCTTACCTTAATTCTTGCTTTGCTCACACTGGCGAGGTAGTTTCAATTAAAATTATTCGCAATAAGATCACTGGACAACCTGAGGGTTATGGGTTTGTGGAGTTTGTATCTCATGCAGCAGCAGAAAGAATTTTGCAGACGTACAATGGGACTCAGATGCCTGGAACTGAGCAAACTTTCAGGTTGAATTGGGCCTCTTTTGGAATTGGAGAAAGGCGCCCTGACGCTGGCCCTGAGCACTCTATTTTTGTGGGGGATCTGGCTCCTGATGTTACAGATTATCTGTTGCAGGAGACCTTTAGAGCGCAATATCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACCGGACGTTCAAAGGGATATGGGTTTGTTAAATTTGCTGATGAAAATGAAAGGAACCGAGCTATGTCAGAAATGAATGGTGTTTATTGCTCAACTAGGCCTATGCGTATTAGTGCAGCAACACCCAAAAAGACTATCGGTGTTCAGCAGCAATATTCTCTAGGTAAAGCAATGTACCCAGTTCCAGCCTACACTACTCCTGTGCCCGTGCTTCCGGCAGATTATGATGCAAATAACACAACTATCTTTGTTGGTAACTTGGATCCTAATATTACGGAGGAGGAGTTGAAGCAAACGTTTTTGCAGTTTGGTGAGATTGTTTATGTGAAAATTCCTGCTGGGAAAGGCTGTGGTTTTGTACAGTTTGGGACGAGGGCTTCAGCTGAAGAAGCCATTCAAAAGATGCAAGGAAAGATAATTGGTCAACAAGTGGTGCGTACTTCTTGGGGTAGAAATCCGGCTGCCAAGCAGGACATGTCTACTTGGGGCCAACAAGTAGATCCGAACCAATGGAGTGCTTACTATGGCTATGGAGGAGCTTATGATGCTTATGGATATGGAGTTGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCGTATCCTCAACAGGTTGACGGTGTACAAGATTTATCTGCTGTAGCTGGTGCTGTCCCTACTGTGGAACAAGGGGAGGAATGGAATGATACGCTGGATACACCAGATGTTGAGTAG

Coding sequence (CDS)

ATGGCGACTCTGGCAGGCCAACCAGCGCACCATCAACCAACTACGGTGGAGGAAGTTAGAACACTCTGGATAGGGGATTTGCAGTACTGGGTCGATGAGTCTTACCTTAATTCTTGCTTTGCTCACACTGGCGAGGTAGTTTCAATTAAAATTATTCGCAATAAGATCACTGGACAACCTGAGGGTTATGGGTTTGTGGAGTTTGTATCTCATGCAGCAGCAGAAAGAATTTTGCAGACGTACAATGGGACTCAGATGCCTGGAACTGAGCAAACTTTCAGGTTGAATTGGGCCTCTTTTGGAATTGGAGAAAGGCGCCCTGACGCTGGCCCTGAGCACTCTATTTTTGTGGGGGATCTGGCTCCTGATGTTACAGATTATCTGTTGCAGGAGACCTTTAGAGCGCAATATCCATCTGTTAGGGGTGCTAAAGTTGTGACTGATCCAAACACCGGACGTTCAAAGGGATATGGGTTTGTTAAATTTGCTGATGAAAATGAAAGGAACCGAGCTATGTCAGAAATGAATGGTGTTTATTGCTCAACTAGGCCTATGCGTATTAGTGCAGCAACACCCAAAAAGACTATCGGTGTTCAGCAGCAATATTCTCTAGGTAAAGCAATGTACCCAGTTCCAGCCTACACTACTCCTGTGCCCGTGCTTCCGGCAGATTATGATGCAAATAACACAACTATCTTTGTTGGTAACTTGGATCCTAATATTACGGAGGAGGAGTTGAAGCAAACGTTTTTGCAGTTTGGTGAGATTGTTTATGTGAAAATTCCTGCTGGGAAAGGCTGTGGTTTTGTACAGTTTGGGACGAGGGCTTCAGCTGAAGAAGCCATTCAAAAGATGCAAGGAAAGATAATTGGTCAACAAGTGGTGCGTACTTCTTGGGGTAGAAATCCGGCTGCCAAGCAGGACATGTCTACTTGGGGCCAACAAGTAGATCCGAACCAATGGAGTGCTTACTATGGCTATGGAGGAGCTTATGATGCTTATGGATATGGAGTTGTACAAGATCCATCTTTATATGCTTATGGTGCATATTCGGGTTATGCCTCGTATCCTCAACAGGTTGACGGTGTACAAGATTTATCTGCTGTAGCTGGTGCTGTCCCTACTGTGGAACAAGGGGAGGAATGGAATGATACGCTGGATACACCAGATGTTGAGTAG

Protein sequence

MATLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVVSIKIIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDMSTWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDGVQDLSAVAGAVPTVEQGEEWNDTLDTPDVE
Homology
[Close]
BLAST of Lag0032923 vs. NCBI nr
Match: XP_008437079.1 (PREDICTED: polyadenylate-binding protein RBP47B' isoform X3 [Cucumis melo])

HSP 1 Score: 792.0 bits (2044), Expect = 2.4e-225
Identity = 381/392 (97.19%), Postives = 387/392 (98.72%), Query Frame = 0 

Query: 1   MATLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVVSIKIIRNKITGQP 60
           MATLAGQP HHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEV+SIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTT VPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEI YVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDMSTWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQD++TWGQQVDPNQWSAYYGYGG YDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLSAVAGAVPTVEQGEEWNDTLDTPDVE 393
           DGVQDL+ VAGAVP+VEQGEEWNDTLDTPDV+
Sbjct: 361 DGVQDLATVAGAVPSVEQGEEWNDTLDTPDVD 392

[Close]
BLAST of Lag0032923 vs. NCBI nr
Match: XP_004152401.1 (polyadenylate-binding protein RBP47B' isoform X1 [Cucumis sativus] >XP_031741259.1 polyadenylate-binding protein RBP47B' isoform X1 [Cucumis sativus] >XP_031741261.1 polyadenylate-binding protein RBP47B' isoform X1 [Cucumis sativus])

HSP 1 Score: 790.4 bits (2040), Expect = 7.0e-225
Identity = 380/392 (96.94%), Postives = 386/392 (98.47%), Query Frame = 0 

Query: 1   MATLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVVSIKIIRNKITGQP 60
           MATLAGQP HHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEV+SIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTT VPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEI YVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDMSTWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQD++TWGQQVDPNQWSAYYGYGG YDAYGYGVVQDPSLY YGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLTTWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYGYGAYSGYASYPQQV 360

Query: 361 DGVQDLSAVAGAVPTVEQGEEWNDTLDTPDVE 393
           DGVQDL+ VAGAVP+VEQGEEWNDTLDTPDV+
Sbjct: 361 DGVQDLATVAGAVPSVEQGEEWNDTLDTPDVD 392

[Close]
BLAST of Lag0032923 vs. NCBI nr
Match: XP_022969897.1 (polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita maxima] >XP_022969898.1 polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 788.1 bits (2034), Expect = 3.5e-224
Identity = 379/392 (96.68%), Postives = 387/392 (98.72%), Query Frame = 0 

Query: 1   MATLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVVSIKIIRNKITGQP 60
           MATLA QP HHQPT+VEEVRTLWIGDLQYWVDESYL+SCFAHTGEV+SIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQY+ GKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEI YVKIPAG+GCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDMSTWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQD++TWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLSAVAGAVPTVEQGEEWNDTLDTPDVE 393
           DGVQDL+AVAGAVP VEQGEEWNDTLDTPDVE
Sbjct: 361 DGVQDLAAVAGAVPAVEQGEEWNDTLDTPDVE 392

[Close]
BLAST of Lag0032923 vs. NCBI nr
Match: KAG7016888.1 (Polyadenylate-binding protein RBP47B' [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 788.1 bits (2034), Expect = 3.5e-224
Identity = 379/392 (96.68%), Postives = 387/392 (98.72%), Query Frame = 0 

Query: 1   MATLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVVSIKIIRNKITGQP 60
           MATLA QP HHQPT+VEEVRTLWIGDLQYWVDESYL+SCFAHTGEV+SIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQY+ GKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEI YVKIPAG+GCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDMSTWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQD++TWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLSAVAGAVPTVEQGEEWNDTLDTPDVE 393
           DGVQDL+AVAGAVP VEQGEEWNDTLDTPDVE
Sbjct: 361 DGVQDLAAVAGAVPAVEQGEEWNDTLDTPDVE 392

[Close]
BLAST of Lag0032923 vs. NCBI nr
Match: XP_022922187.1 (polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita moschata] >XP_022922188.1 polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 786.9 bits (2031), Expect = 7.8e-224
Identity = 378/392 (96.43%), Postives = 387/392 (98.72%), Query Frame = 0 

Query: 1   MATLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVVSIKIIRNKITGQP 60
           MATLA QP HHQPT+VEEVRTLWIGDLQYWVDESYL+SCFAHTGEV+SIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQY+ GKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEI YVKIPAG+GCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDMSTWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQD++TWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLSAVAGAVPTVEQGEEWNDTLDTPDVE 393
           DGVQDL+AVAGAVP +EQGEEWNDTLDTPDVE
Sbjct: 361 DGVQDLAAVAGAVPALEQGEEWNDTLDTPDVE 392

[Close]
BLAST of Lag0032923 vs. ExPASy Swiss-Prot
Match: Q8VXZ9 (Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B' PE=2 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 2.0e-153
Identity = 274/392 (69.90%), Postives = 312/392 (79.59%), Query Frame = 0 

Query: 7   QPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVVSIKIIRNKITGQPEGYGFV 66
           Q ++H P T+EEVRTLWIGDLQYWVDE+YL SCF+ TGE+VS+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQYSLGKAMYPV---PAYTTPVP--VLPADYDANNTTIFVGNLDPNI 246
           ISAATPKK +GVQQQY + KA+YPV    A   PV   V P + D   TTI V NLD N+
Sbjct: 191 ISAATPKKNVGVQQQY-VTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNV 250

Query: 247 TEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGR 306
           TEEELK+ F Q GE++YVKIPA KG G+VQF TR SAEEA+Q+MQG++IGQQ VR SW +
Sbjct: 251 TEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSK 310

Query: 307 NPAAKQDMSTWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVD 366
           NP        W  Q DPNQW+ YYGYG  YDAY YG  QDPS+YAYG Y GY  YPQQ +
Sbjct: 311 NPG----QDGWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQGE 370

Query: 367 GVQDLS-AVAGAVPTVEQGEEWNDTLDTPDVE 393
           G QD+S + AG V   EQ  E  D L TPDV+
Sbjct: 371 GTQDISNSAAGGVAGAEQ--ELYDPLATPDVD 393

[Close]
BLAST of Lag0032923 vs. ExPASy Swiss-Prot
Match: Q9LEB4 (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP45 PE=1 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 3.0e-117
Identity = 224/361 (62.05%), Postives = 262/361 (72.58%), Query Frame = 0 

Query: 1   MATLAGQPAHHQPT-TVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVVSIKIIRNKITGQ 60
           MAT    P+   PT    EVR+LWIGDLQYW+DE+YL++CF HTGE+VS K+IRNK TGQ
Sbjct: 67  MATTNPNPS---PTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQ 126

Query: 61  PEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGD 120
            EGYGF+EF SHAAAE ILQTYNGT MP  EQ FR+NWAS G GERR D+  EH+IFVGD
Sbjct: 127 SEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSA-EHTIFVGD 186

Query: 121 LAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVY 180
           LA DVTDY+LQETF++ Y SVRGAKVVTD  TGRSKGYGFVKFADE+E+ RAM+EMNGV 
Sbjct: 187 LAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVL 246

Query: 181 CSTRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDP 240
           CSTRPMRI  A  KK +G  Q     KA Y  P  T        + D NNTTIFVG LDP
Sbjct: 247 CSTRPMRIGPAANKKPVGTPQ-----KATYQNPQAT------QGESDPNNTTIFVGGLDP 306

Query: 241 NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSW 300
            + EE L+Q F  +GE+V+VKI AGK CGFVQFGTRASAE+A+  + G  +G Q +R SW
Sbjct: 307 TVAEEHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSW 366

Query: 301 GRNPAAKQ-DMSTWGQQVDPNQWSAYYGYGGAYDAYGYG-VVQDPSLYAYGAYSGYASYP 359
           GR+P++KQ D + WG         AYYGYG  Y+AYGY    QDP++Y YG Y GYA+Y 
Sbjct: 367 GRSPSSKQTDQTQWG-----GSGGAYYGYGQGYEAYGYAPPAQDPNMY-YGNYPGYANYQ 406

[Close]
BLAST of Lag0032923 vs. ExPASy Swiss-Prot
Match: Q9LEB3 (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 7.8e-110
Identity = 207/358 (57.82%), Postives = 257/358 (71.79%), Query Frame = 0 

Query: 7   QPAHHQPTTV----EEVRTLWIGDLQYWVDESYLNSCFAHTGEVVSIKIIRNKITGQPEG 66
           Q     PT +    E+ +T+WIGDLQ W+DESYL+SCF+  GEV+S+KIIRNK TGQ E 
Sbjct: 67  QKMQQSPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSER 126

Query: 67  YGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAP 126
           YGFVEF +HAAAE++LQ+YNGT MP TEQ FRLNWA F  GE+R + G + SIFVGDLA 
Sbjct: 127 YGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLAS 186

Query: 127 DVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCST 186
           DVTD +L++TF ++YPS++GAKVV D NTG SKGYGFV+F DE+ER+RAM+EMNGVYCS+
Sbjct: 187 DVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSS 246

Query: 187 RPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVL---PADYDANNTTIFVGNLDP 246
           R MRI  ATPKK     +QYS  +A+     Y +         +D D++NTTIFVG LD 
Sbjct: 247 RAMRIGVATPKKP-SAHEQYS-SQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDS 306

Query: 247 NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSW 306
            +T+EEL+Q+F QFGE+V VKIPAGKGCGFVQF  R+SA+EAIQK+ G IIG+Q VR SW
Sbjct: 307 EVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSW 366

Query: 307 GRNPAAKQDMSTWGQQVDPNQWSAYYGYGGAYDAYGYGVV--QDPSLYAYGAYSGYAS 356
           GR+PA KQ  +  G     +QW+  Y     Y  YGYG    QD  +YA GA  G +S
Sbjct: 367 GRSPANKQMRTDSG-----SQWNGGYNGRQNYGGYGYGASQNQDSGMYATGAAYGASS 417

[Close]
BLAST of Lag0032923 vs. ExPASy Swiss-Prot
Match: Q0J9Y2 (RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 3.0e-109
Identity = 207/355 (58.31%), Postives = 249/355 (70.14%), Query Frame = 0 

Query: 13  PTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVVSIKIIRNKITGQPEGYGFVEFVSHA 72
           P   +EV+TLWIGDLQ W+DESY+ +CFA TGEV S+K+IR+K +GQ +GYGFVEF S A
Sbjct: 83  PAAADEVKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRA 142

Query: 73  AAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQET 132
           AA+RILQTYNG  MP  E  FRLNWAS   GE+R D  P+++IFVGDLA DVTDYLLQET
Sbjct: 143 AADRILQTYNGQMMPNVEMVFRLNWAS--AGEKRDDT-PDYTIFVGDLAADVTDYLLQET 202

Query: 133 FRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATP 192
           FR  YPSV+GAKVVTD  T RSKGYGFVKF D  E+ RAM+EMNG+ CS+RPMRI  A  
Sbjct: 203 FRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAAN 262

Query: 193 KKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQ 252
           KKT GVQ++    +                ++ D NNTTIFVG LDPN+TE+ LKQ F  
Sbjct: 263 KKTTGVQERVPNAQG-------------AQSENDPNNTTIFVGGLDPNVTEDVLKQVFAP 322

Query: 253 FGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDMSTW 312
           +GE+V+VKIP GK CGFVQ+  R SAE+A+  +QG +IG Q VR SWGR+ + KQ     
Sbjct: 323 YGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWGRSLSNKQ----- 382

Query: 313 GQQVDPNQWSA-------YYGYGGAYDAY-GYGVVQDPSLYAYGAYSGYASYPQQ 360
             Q D NQW A       Y GYG  Y+AY GY   QDP++Y YGAY+GY +Y QQ
Sbjct: 383 -PQHDSNQWGAGAGAGGYYGGYGQGYEAYGGYAQPQDPNMYGYGAYAGYPNYQQQ 415

[Close]
BLAST of Lag0032923 vs. ExPASy Swiss-Prot
Match: Q9SAB3 (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B PE=1 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 1.4e-106
Identity = 198/349 (56.73%), Postives = 249/349 (71.35%), Query Frame = 0 

Query: 5   AGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVVSIKIIRNKITGQPEGYG 64
           A  P   QPTT +E+RTLWIGDLQYW+DE++L  CFAHTGE+VS K+IRNK TGQ EGYG
Sbjct: 47  AAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYG 106

Query: 65  FVEFVSHAAAERILQTYNGTQMPG-TEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPD 124
           F+EF SHAAAER+LQT+N   +P   +Q FRLNWAS   G++R D+ P+++IFVGDLA D
Sbjct: 107 FIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAAD 166

Query: 125 VTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTR 184
           VTDY+L ETFRA YPSV+GAKVV D  TGR+KGYGFV+F+DE+E+ RAM+EMNGV CSTR
Sbjct: 167 VTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTR 226

Query: 185 PMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNITE 244
           PMRI  A  KK +  Q+            +Y +    +  D D NNTT+FVG LD ++T+
Sbjct: 227 PMRIGPAASKKGVTGQRD-----------SYQSSAAGVTTDNDPNNTTVFVGGLDASVTD 286

Query: 245 EELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNP 304
           + LK  F Q+GEIV+VKIPAGK CGFVQF  ++ AEEA++ + G  +G   VR SWGR+P
Sbjct: 287 DHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSP 346

Query: 305 AAKQDMSTWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSG 353
           + K       Q  DP+Q+  Y GYG   + YGY + QDP+ Y YG YSG
Sbjct: 347 SNK-------QSGDPSQF-YYGGYGQGQEQYGYTMPQDPNAY-YGGYSG 374

[Close]
BLAST of Lag0032923 vs. ExPASy TrEMBL
Match: A0A1S3ATQ6 (polyadenylate-binding protein RBP47B' isoform X3 OS=Cucumis melo OX=3656 GN=LOC103482609 PE=4 SV=1)

HSP 1 Score: 792.0 bits (2044), Expect = 1.2e-225
Identity = 381/392 (97.19%), Postives = 387/392 (98.72%), Query Frame = 0 

Query: 1   MATLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVVSIKIIRNKITGQP 60
           MATLAGQP HHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEV+SIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTT VPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEI YVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDMSTWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQD++TWGQQVDPNQWSAYYGYGG YDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLSAVAGAVPTVEQGEEWNDTLDTPDVE 393
           DGVQDL+ VAGAVP+VEQGEEWNDTLDTPDV+
Sbjct: 361 DGVQDLATVAGAVPSVEQGEEWNDTLDTPDVD 392

[Close]
BLAST of Lag0032923 vs. ExPASy TrEMBL
Match: A0A6J1HXL5 (polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468959 PE=4 SV=1)

HSP 1 Score: 788.1 bits (2034), Expect = 1.7e-224
Identity = 379/392 (96.68%), Postives = 387/392 (98.72%), Query Frame = 0 

Query: 1   MATLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVVSIKIIRNKITGQP 60
           MATLA QP HHQPT+VEEVRTLWIGDLQYWVDESYL+SCFAHTGEV+SIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQY+ GKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEI YVKIPAG+GCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDMSTWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQD++TWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLSAVAGAVPTVEQGEEWNDTLDTPDVE 393
           DGVQDL+AVAGAVP VEQGEEWNDTLDTPDVE
Sbjct: 361 DGVQDLAAVAGAVPAVEQGEEWNDTLDTPDVE 392

[Close]
BLAST of Lag0032923 vs. ExPASy TrEMBL
Match: A0A6J1E2I3 (polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430253 PE=4 SV=1)

HSP 1 Score: 786.9 bits (2031), Expect = 3.8e-224
Identity = 378/392 (96.43%), Postives = 387/392 (98.72%), Query Frame = 0 

Query: 1   MATLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVVSIKIIRNKITGQP 60
           MATLA QP HHQPT+VEEVRTLWIGDLQYWVDESYL+SCFAHTGEV+SIKIIRNKITGQP
Sbjct: 1   MATLASQPTHHQPTSVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQY+ GKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYTPGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEI YVKIPAG+GCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEITYVKIPAGRGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQDMSTWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360
           RNPAAKQD++TWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV
Sbjct: 301 RNPAAKQDLATWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQV 360

Query: 361 DGVQDLSAVAGAVPTVEQGEEWNDTLDTPDVE 393
           DGVQDL+AVAGAVP +EQGEEWNDTLDTPDVE
Sbjct: 361 DGVQDLAAVAGAVPALEQGEEWNDTLDTPDVE 392

[Close]
BLAST of Lag0032923 vs. ExPASy TrEMBL
Match: A0A1S3ASS8 (polyadenylate-binding protein RBP47B' isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482609 PE=4 SV=1)

HSP 1 Score: 785.8 bits (2028), Expect = 8.4e-224
Identity = 381/397 (95.97%), Postives = 387/397 (97.48%), Query Frame = 0 

Query: 1   MATLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVVSIKIIRNKITGQP 60
           MATLAGQP HHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEV+SIKIIRNKITGQP
Sbjct: 1   MATLAGQPTHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPN 240
           STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTT VPVLPADYDANNTTIFVGNLDPN
Sbjct: 181 STRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPN 240

Query: 241 ITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300
           ITEEELKQTFLQFGEI YVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG
Sbjct: 241 ITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWG 300

Query: 301 RNPAAKQ-----DMSTWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYAS 360
           RNPAAKQ     D++TWGQQVDPNQWSAYYGYGG YDAYGYGVVQDPSLYAYGAYSGYAS
Sbjct: 301 RNPAAKQEIDSLDLATWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYAYGAYSGYAS 360

Query: 361 YPQQVDGVQDLSAVAGAVPTVEQGEEWNDTLDTPDVE 393
           YPQQVDGVQDL+ VAGAVP+VEQGEEWNDTLDTPDV+
Sbjct: 361 YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVD 397

[Close]
BLAST of Lag0032923 vs. ExPASy TrEMBL
Match: A0A6J1DLA1 (polyadenylate-binding protein RBP47B' isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021961 PE=4 SV=1)

HSP 1 Score: 781.2 bits (2016), Expect = 2.1e-222
Identity = 377/393 (95.93%), Postives = 386/393 (98.22%), Query Frame = 0 

Query: 1   MATLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVVSIKIIRNKITGQP 60
           M TLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYL+SCFAHTGEVVSIKIIRNKITGQP
Sbjct: 1   MTTLAGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLSSCFAHTGEVVSIKIIRNKITGQP 60

Query: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120
           EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL
Sbjct: 61  EGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDL 120

Query: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYC 180
           APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAM+EMNGVYC
Sbjct: 121 APDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVYC 180

Query: 181 STRPMRISAATPKKTIGVQQQY-SLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDP 240
           STRPMRISAATPKKTIGVQQQY +LGKAMYPVPAYTTPVP LPADYD+NNTTIFVGNLDP
Sbjct: 181 STRPMRISAATPKKTIGVQQQYNTLGKAMYPVPAYTTPVPTLPADYDSNNTTIFVGNLDP 240

Query: 241 NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSW 300
           NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTR SAEEAIQKMQGKIIGQQVVRTSW
Sbjct: 241 NITEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRTSAEEAIQKMQGKIIGQQVVRTSW 300

Query: 301 GRNPAAKQDMSTWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360
           GRNPAAKQ+++TWGQQVDPNQWSAYYGYGG YDAYGYGVVQDPSLYAYGAYSGYASYPQQ
Sbjct: 301 GRNPAAKQELTTWGQQVDPNQWSAYYGYGGGYDAYGYGVVQDPSLYAYGAYSGYASYPQQ 360

Query: 361 VDGVQDLSAVAGAVPTVEQGEEWNDTLDTPDVE 393
           VDGVQDL+AVAGAVP VE GEEWN+TLDTPDVE
Sbjct: 361 VDGVQDLAAVAGAVPAVEHGEEWNETLDTPDVE 393

[Close]
BLAST of Lag0032923 vs. TAIR 10
Match: AT5G19350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 543.5 bits (1399), Expect = 1.4e-154
Identity = 274/392 (69.90%), Postives = 312/392 (79.59%), Query Frame = 0 

Query: 7   QPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVVSIKIIRNKITGQPEGYGFV 66
           Q ++H P T+EEVRTLWIGDLQYWVDE+YL SCF+ TGE+VS+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQYSLGKAMYPV---PAYTTPVP--VLPADYDANNTTIFVGNLDPNI 246
           ISAATPKK +GVQQQY + KA+YPV    A   PV   V P + D   TTI V NLD N+
Sbjct: 191 ISAATPKKNVGVQQQY-VTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNV 250

Query: 247 TEEELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGR 306
           TEEELK+ F Q GE++YVKIPA KG G+VQF TR SAEEA+Q+MQG++IGQQ VR SW +
Sbjct: 251 TEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSK 310

Query: 307 NPAAKQDMSTWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVD 366
           NP        W  Q DPNQW+ YYGYG  YDAY YG  QDPS+YAYG Y GY  YPQQ +
Sbjct: 311 NPG----QDGWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQGE 370

Query: 367 GVQDLS-AVAGAVPTVEQGEEWNDTLDTPDVE 393
           G QD+S + AG V   EQ  E  D L TPDV+
Sbjct: 371 GTQDISNSAAGGVAGAEQ--ELYDPLATPDVD 393

[Close]
BLAST of Lag0032923 vs. TAIR 10
Match: AT5G19350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 537.7 bits (1384), Expect = 7.6e-153
Identity = 267/387 (68.99%), Postives = 304/387 (78.55%), Query Frame = 0 

Query: 7   QPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVVSIKIIRNKITGQPEGYGFV 66
           Q ++H P T+EEVRTLWIGDLQYWVDE+YL SCF+ TGE+VS+K+IRNKITGQPEGYGF+
Sbjct: 11  QGSYHHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFI 70

Query: 67  EFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTD 126
           EF+SHAAAER LQTYNGTQMPGTE TFRLNWASFG G+ + DAGP+HSIFVGDLAPDVTD
Sbjct: 71  EFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQ-KVDAGPDHSIFVGDLAPDVTD 130

Query: 127 YLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMR 186
           YLLQETFR  Y SVRGAKVVTDP+TGRSKGYGFVKFA+E+ERNRAM+EMNG+YCSTRPMR
Sbjct: 131 YLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMR 190

Query: 187 ISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNITEEEL 246
           ISAATPKK +GVQQQY     +    A      V P + D   TTI V NLD N+TEEEL
Sbjct: 191 ISAATPKKNVGVQQQYVTKVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEEL 250

Query: 247 KQTFLQFGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAK 306
           K+ F Q GE++YVKIPA KG G+VQF TR SAEEA+Q+MQG++IGQQ VR SW +NP   
Sbjct: 251 KKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNPG-- 310

Query: 307 QDMSTWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSGYASYPQQVDGVQDL 366
                W  Q DPNQW+ YYGYG  YDAY YG  QDPS+YAYG Y GY  YPQQ +G QD+
Sbjct: 311 --QDGWVTQADPNQWNGYYGYGQGYDAYAYGATQDPSVYAYGGY-GYPQYPQQGEGTQDI 370

Query: 367 S-AVAGAVPTVEQGEEWNDTLDTPDVE 393
           S + AG V   EQ  E  D L TPDV+
Sbjct: 371 SNSAAGGVAGAEQ--ELYDPLATPDVD 389

[Close]
BLAST of Lag0032923 vs. TAIR 10
Match: AT1G11650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 387.9 bits (995), Expect = 9.8e-108
Identity = 198/349 (56.73%), Postives = 249/349 (71.35%), Query Frame = 0 

Query: 5   AGQPAHHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVVSIKIIRNKITGQPEGYG 64
           A  P   QPTT +E+RTLWIGDLQYW+DE++L  CFAHTGE+VS K+IRNK TGQ EGYG
Sbjct: 47  AAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYG 106

Query: 65  FVEFVSHAAAERILQTYNGTQMPG-TEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPD 124
           F+EF SHAAAER+LQT+N   +P   +Q FRLNWAS   G++R D+ P+++IFVGDLA D
Sbjct: 107 FIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAAD 166

Query: 125 VTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTR 184
           VTDY+L ETFRA YPSV+GAKVV D  TGR+KGYGFV+F+DE+E+ RAM+EMNGV CSTR
Sbjct: 167 VTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTR 226

Query: 185 PMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNITE 244
           PMRI  A  KK +  Q+            +Y +    +  D D NNTT+FVG LD ++T+
Sbjct: 227 PMRIGPAASKKGVTGQRD-----------SYQSSAAGVTTDNDPNNTTVFVGGLDASVTD 286

Query: 245 EELKQTFLQFGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNP 304
           + LK  F Q+GEIV+VKIPAGK CGFVQF  ++ AEEA++ + G  +G   VR SWGR+P
Sbjct: 287 DHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSP 346

Query: 305 AAKQDMSTWGQQVDPNQWSAYYGYGGAYDAYGYGVVQDPSLYAYGAYSG 353
           + K       Q  DP+Q+  Y GYG   + YGY + QDP+ Y YG YSG
Sbjct: 347 SNK-------QSGDPSQF-YYGGYGQGQEQYGYTMPQDPNAY-YGGYSG 374

[Close]
BLAST of Lag0032923 vs. TAIR 10
Match: AT5G54900.1 (RNA-binding protein 45A )

HSP 1 Score: 380.6 bits (976), Expect = 1.6e-105
Identity = 195/353 (55.24%), Postives = 239/353 (67.71%), Query Frame = 0 

Query: 13  PTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVVSIKIIRNKITGQPEGYGFVEFVSHA 72
           P +  +V++LWIGDLQ W+DE+Y+ S FA +GE  S K+IRNK+TGQ EGYGF+EFVSH+
Sbjct: 53  PGSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHS 112

Query: 73  AAERILQTYNGTQMPGTEQTFRLNWASFGIGERR-PDAGPEHSIFVGDLAPDVTDYLLQE 132
            AER+LQTYNG  MP TEQTFRLNWA  G GE+R    GP+H+IFVGDLAP+VTDY+L +
Sbjct: 113 VAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSD 172

Query: 133 TFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAAT 192
           TF+  Y SV+GAKVV D  TGRSKGYGFV+FADENE+ RAM+EMNG YCSTRPMRI  A 
Sbjct: 173 TFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAA 232

Query: 193 PKKTIGVQQQYSLGKAMYPVPA-YTTPVPVLPADYDANNTTIFVGNLDPNITEEELKQTF 252
            K  + +Q            PA Y         D D NNTTIFVG LD N+T++ELK  F
Sbjct: 233 NKNALPMQ------------PAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIF 292

Query: 253 LQFGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDMS 312
            QFGE+++VKIP GK CGFVQ+  +ASAE A+  + G  +G Q +R SWGR+P  + D +
Sbjct: 293 GQFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSPNKQSDQA 352

Query: 313 TWGQQVDPNQWSAYYGY-GGAYDAYGYGV---VQDPSLYAYGAYSGYASYPQQ 360
            W           YYGY       YGY      QDP+ Y YG Y+GY +Y QQ
Sbjct: 353 QW-------NGGGYYGYPPQPQGGYGYAAQPPTQDPNAY-YGGYTGYGNYQQQ 385

[Close]
BLAST of Lag0032923 vs. TAIR 10
Match: AT1G47500.1 (RNA-binding protein 47C' )

HSP 1 Score: 379.8 bits (974), Expect = 2.7e-105
Identity = 206/356 (57.87%), Postives = 248/356 (69.66%), Query Frame = 0 

Query: 11  HQPTTVEEVRTLWIGDLQYWVDESYLNSCF--AHTGEVVSIKIIRNKITGQPEGYGFVEF 70
           HQ     E +T+W+GDLQ W+DE+YLNS F  A   E+VS+K+IRNK  G  EGYGFVEF
Sbjct: 94  HQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEF 153

Query: 71  VSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERR-PDAGPEHSIFVGDLAPDVTDY 130
            SH  A+++LQ +NG  MP T+Q FRLNWASF  GE+R  + GP+ SIFVGDLAPDV+D 
Sbjct: 154 ESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDA 213

Query: 131 LLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRI 190
           LL ETF  +YPSV+ AKVV D NTGRSKGYGFV+F DENER +AM+EMNGV CS+R MRI
Sbjct: 214 LLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRI 273

Query: 191 SAATPKKTIGVQQQYSLGKAMYPVPAYTTPVPVLPADYDANNTTIFVGNLDPNITEEELK 250
             ATP+KT G QQQ        P  A+T       ++ D  NTTIFVG LD ++T+E+LK
Sbjct: 274 GPATPRKTNGYQQQ----GGYMPSGAFTR------SEGDTINTTIFVGGLDSSVTDEDLK 333

Query: 251 QTFLQFGEIVYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQ 310
           Q F +FGEIV VKIP GKGCGFVQF  R +AEEA++K+ G +IG+Q VR SWGRNPA KQ
Sbjct: 334 QPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQ 393

Query: 311 DMSTWGQQ-VDPNQWSAYYGYGGAYDAYGYGVVQ-DPSLY-AYGAYSGYASYPQQV 361
               +G Q VDP     YYG G  Y+ YGY V Q DP +Y A   Y  Y  + QQV
Sbjct: 394 PRDKYGNQWVDP-----YYG-GQFYNGYGYMVPQPDPRMYPAAPYYPMYGGHQQQV 433

The following BLAST results are available for this feature:
BLAST of Lag0032923 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008437079.12.4e-22597.19PREDICTED: polyadenylate-binding protein RBP47B' isoform X3 [Cucumis melo][more]
XP_004152401.17.0e-22596.94polyadenylate-binding protein RBP47B' isoform X1 [Cucumis sativus] >XP_031741259... [more]
XP_022969897.13.5e-22496.68polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita maxima] >XP_022... [more]
KAG7016888.13.5e-22496.68Polyadenylate-binding protein RBP47B' [Cucurbita argyrosperma subsp. argyrosperm... [more]
XP_022922187.17.8e-22496.43polyadenylate-binding protein RBP47B'-like isoform X1 [Cucurbita moschata] >XP_0... [more]
BLAST of Lag0032923 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VXZ92.0e-15369.90Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B'... [more]
Q9LEB43.0e-11762.05Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4... [more]
Q9LEB37.8e-11057.82Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP4... [more]
Q0J9Y23.0e-10958.31RNA-binding protein L OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-L PE=1 SV=... [more]
Q9SAB31.4e-10656.73Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B P... [more]
BLAST of Lag0032923 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3ATQ61.2e-22597.19polyadenylate-binding protein RBP47B' isoform X3 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1HXL51.7e-22496.68polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita maxima OX=366... [more]
A0A6J1E2I33.8e-22496.43polyadenylate-binding protein RBP47B'-like isoform X1 OS=Cucurbita moschata OX=3... [more]
A0A1S3ASS88.4e-22495.97polyadenylate-binding protein RBP47B' isoform X1 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1DLA12.1e-22295.93polyadenylate-binding protein RBP47B' isoform X1 OS=Momordica charantia OX=3673 ... [more]
BLAST of Lag0032923 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G19350.11.4e-15469.90RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G19350.27.6e-15368.99RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT1G11650.29.8e-10856.73RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G54900.11.6e-10555.24RNA-binding protein 45A [more]
AT1G47500.12.7e-10557.87RNA-binding protein 47C' [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 114..188
e-value: 3.6E-21
score: 86.3
coord: 231..298
e-value: 3.5E-23
score: 93.0
coord: 21..96
e-value: 1.4E-14
score: 64.4
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 22..90
e-value: 1.0E-14
score: 54.1
coord: 115..180
e-value: 1.8E-16
score: 59.7
coord: 232..295
e-value: 4.8E-19
score: 68.0
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 230..302
score: 17.421124
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 113..192
score: 17.455235
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 20..100
score: 15.459753
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 19..99
e-value: 1.4E-24
score: 88.0
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 222..311
e-value: 2.3E-25
score: 90.8
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 102..206
e-value: 1.5E-22
score: 82.0
NoneNo IPR availablePANTHERPTHR47640TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATEDcoord: 10..359
NoneNo IPR availablePANTHERPTHR47640:SF6POLYADENYLATE-BINDING PROTEIN RBP45A-RELATEDcoord: 10..359
NoneNo IPR availableCDDcd12345RRM2_SECp43_likecoord: 112..191
e-value: 5.36641E-54
score: 171.308
NoneNo IPR availableCDDcd12346RRM3_NGR1_NAM8_likecoord: 229..300
e-value: 2.42403E-39
score: 133.198
NoneNo IPR availableCDDcd12344RRM1_SECp43_likecoord: 21..101
e-value: 5.24345E-49
score: 158.58
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 8..88
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 112..304

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0032923.1Lag0032923.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding