Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCACGGGAAACAAGAGTTCTAGAGACGAAATAACTCGGTTCCCAAACAAGAAAGGCACATTCACGGTGAAAAGTGCCTATCACCTAGTCAAAGACTTCAACTACGGACTCGAGGCGTCACAATCAGACAGAATGAGATCTTCTTTATTTTGGAAATCCATATGGTCTTTAAAGGCTCTCCCTAGATCAAAAGTCGGTGTTTGGAAGATAGTGACCGATATTATCCCCACAAAGGCTAATATCCAATCCAAAGGGATTGCTATTCAAGCTTCGTGTGCAATCTGTGGGAAAGGGAAGGAAACCACATCCCACCTAATGTGGGATTGTAAAATTCCCAGATCAATGTGGCCTATTTTCATCCCCAAATTGACTTCTTCCCCCTTGTTTTGCAGGAAAGATCGGGATCCAAAGGAGTTTTGGGCGTGGATGATCAACAATCTGTCTAAGGAAGAGCTAGAAAGGGGAGCGACTATGCTATGAAGCATATGGAATTTCAGAAACAAGATAATTCACAACAATATTATCCCAGCAGCGAAAGCTTTGCAAATTACCATTGAAGTGAATATAAAGGAGCGAATCTTTACCTTCGACAAGCAACAGAACTCGAGAACGAGGAGCCAAGTGAGTCAGGCTACGTGGGAGAGACCTAAATCGAACCAGTGGAAGCTAAATTCGGATGCTGGCTGGTTCGAGAAAGACGGTCGCGGAGGCATTGGTTGGATCGTGCGTGACTCAACTGGATCCACGATGTGTTTTGGAATGAAGGCCATCACCAATCCGTGGCCAATTAAAATGTTGGAGGCTCAAGCGATCCTTGAAGGCCTCAATTGCATCAAGGACACCTGCAAGCAACGTCAAATTCCCCTGGTTATCGAATCTGACACGTTGGAGGTCATAAAAGTGTTGAACAAAGAAGAGGAAGACTTAATTATCTGA
mRNA sequence
ATGTCCACGGGAAACAAGAGTTCTAGAGACGAAATAACTCGGTTCCCAAACAAGAAAGGCACATTCACGGTGAAAAGTGCCTATCACCTAGTCAAAGACTTCAACTACGGACTCGAGGCGTCACAATCAGACAGAATGAGATCTTCTTTATTTTGGAAATCCATATGGTCTTTAAAGGCTCTCCCTAGATCAAAAGTCGGTGTTTGGAAGATAGTGACCGATATTATCCCCACAAAGGCTAATATCCAATCCAAAGGGATTGCTATTCAAGCTTCGTGTGCAATCTGTGGGAAAGGGAAGGAAACCACATCCCACCTAATAAACAAGATAATTCACAACAATATTATCCCAGCAGCGAAAGCTTTGCAAATTACCATTGAAGTGAATATAAAGGAGCGAATCTTTACCTTCGACAAGCAACAGAACTCGAGAACGAGGAGCCAAGTGAGTCAGGCTACGTGGGAGAGACCTAAATCGAACCAGTGGAAGCTAAATTCGGATGCTGGCTGGTTCGAGAAAGACGGTCGCGGAGGCATTGGTTGGATCGTGCGTGACTCAACTGGATCCACGATGTGTTTTGGAATGAAGGCCATCACCAATCCGTGGCCAATTAAAATGTTGGAGGCTCAAGCGATCCTTGAAGGCCTCAATTGCATCAAGGACACCTGCAAGCAACGTCAAATTCCCCTGGTTATCGAATCTGACACGTTGGAGGTCATAAAAGTGTTGAACAAAGAAGAGGAAGACTTAATTATCTGA
Coding sequence (CDS)
ATGTCCACGGGAAACAAGAGTTCTAGAGACGAAATAACTCGGTTCCCAAACAAGAAAGGCACATTCACGGTGAAAAGTGCCTATCACCTAGTCAAAGACTTCAACTACGGACTCGAGGCGTCACAATCAGACAGAATGAGATCTTCTTTATTTTGGAAATCCATATGGTCTTTAAAGGCTCTCCCTAGATCAAAAGTCGGTGTTTGGAAGATAGTGACCGATATTATCCCCACAAAGGCTAATATCCAATCCAAAGGGATTGCTATTCAAGCTTCGTGTGCAATCTGTGGGAAAGGGAAGGAAACCACATCCCACCTAATAAACAAGATAATTCACAACAATATTATCCCAGCAGCGAAAGCTTTGCAAATTACCATTGAAGTGAATATAAAGGAGCGAATCTTTACCTTCGACAAGCAACAGAACTCGAGAACGAGGAGCCAAGTGAGTCAGGCTACGTGGGAGAGACCTAAATCGAACCAGTGGAAGCTAAATTCGGATGCTGGCTGGTTCGAGAAAGACGGTCGCGGAGGCATTGGTTGGATCGTGCGTGACTCAACTGGATCCACGATGTGTTTTGGAATGAAGGCCATCACCAATCCGTGGCCAATTAAAATGTTGGAGGCTCAAGCGATCCTTGAAGGCCTCAATTGCATCAAGGACACCTGCAAGCAACGTCAAATTCCCCTGGTTATCGAATCTGACACGTTGGAGGTCATAAAAGTGTTGAACAAAGAAGAGGAAGACTTAATTATCTGA
Protein sequence
MSTGNKSSRDEITRFPNKKGTFTVKSAYHLVKDFNYGLEASQSDRMRSSLFWKSIWSLKALPRSKVGVWKIVTDIIPTKANIQSKGIAIQASCAICGKGKETTSHLINKIIHNNIIPAAKALQITIEVNIKERIFTFDKQQNSRTRSQVSQATWERPKSNQWKLNSDAGWFEKDGRGGIGWIVRDSTGSTMCFGMKAITNPWPIKMLEAQAILEGLNCIKDTCKQRQIPLVIESDTLEVIKVLNKEEEDLII
Homology
BLAST of Lag0032908 vs. NCBI nr
Match:
XP_042974784.1 (uncharacterized protein LOC122306423 [Carya illinoinensis])
HSP 1 Score: 102.4 bits (254), Expect = 5.7e-18
Identity = 73/252 (28.97%), Postives = 122/252 (48.41%), Query Frame = 0
Query: 7 SSRDEITRFPNKKGTFTVKSAYHLVKDFNYGLEASQSDRMRSSLFWKSIWSLKALPRSKV 66
+S D + K G+F+VKSAY ++ ++ L S ++FWKS+W LK + K+
Sbjct: 843 NSEDSLYWSHEKNGSFSVKSAYRFIQQHHHLLYGQSSSGSSEAVFWKSLWHLKLPKKMKI 902
Query: 67 GVWKIVTDIIPTKANIQSKGIAIQASCAICGKGKETTSH-LINKIIHNNI-----IPAAK 126
W+ + +PT N++ + + A+C +C +G E +H L NK ++ NI +
Sbjct: 903 FAWRACQEKLPTYLNLKKRHVLDDATCVLCNQGMEDAAHALRNKQLYENISMPFNVTVNN 962
Query: 127 ALQITIEVNIKERIFTFDKQQNSRTRSQVSQAT-WERPKSNQWKLNSDAGWFEKDGRGGI 186
AL + E E++ FD + ++S+ W P S+ KLN D F + G+
Sbjct: 963 ALALEKEY---EQVHLFD-----ASNPKISKVVRWHPPPSDFLKLNIDGATFPELSVAGV 1022
Query: 187 GWIVRDSTGSTMCFGMKAITNPWPIKMLEAQAILEGLNCIKDTCKQRQIP-LVIESDTLE 246
G ++R+ G + K + +EA A+L GL C Q IP L++E+D L
Sbjct: 1023 GVVLRNHKGEVIVACSKVEKEVSSAEFIEAVALLRGL----QLCVQWGIPKLMLETDCLI 1082
Query: 247 VIKVLNKEEEDL 251
++ LN E L
Sbjct: 1083 LVNALNGNSECL 1082
BLAST of Lag0032908 vs. NCBI nr
Match:
KAF7837133.1 (uncharacterized protein G2W53_005615 [Senna tora])
HSP 1 Score: 97.1 bits (240), Expect = 2.4e-16
Identity = 71/239 (29.71%), Postives = 119/239 (49.79%), Query Frame = 0
Query: 17 NKKGTFTVKSAYHLVKDFNYGLEASQSDRMRSSLFWKSIWSLKALPRSKVGVWKIVTDII 76
N G F+VKSAY +V + + + R S WK IW K P+ + W+ I+
Sbjct: 26 NANGLFSVKSAYKVV----HNSYSRTNTWTRYSSVWKKIWKAKLPPKIRSFCWRAYRGIL 85
Query: 77 PTKANIQSKGIAIQASCAICGKGKETTSHLI-----NKIIHNNIIPAAKALQITIEVNIK 136
PT N++++G+ + C +CG E TSH + K + +N + A T EV +
Sbjct: 86 PTCVNLKNRGMEVDTRCCVCGLEDENTSHALVGCPELKSLWDNHMSDADGQFNTNEVFV- 145
Query: 137 ERIFTFDKQQNSRTRSQVSQATWERPKSNQWKLNSDAGWFEKDGRGGIGWIVRDSTGSTM 196
E +++ R R+ + + WE P ++ K+N DA F G+GGIG +VR+ GS +
Sbjct: 146 EWFSNKGTRRDDRNRA-IMEGQWEAPMWHEMKVNVDAS-FLGQGKGGIGCVVRNFQGSCL 205
Query: 197 CFGMKAITNPWPIKMLEAQAILEGLNCIKDTCKQRQIPLVIESDTLEVIKVLNKEEEDL 251
K I N +LEA A L+GL K+ R +++E + +V+ +++ ++L
Sbjct: 206 AAFAKRIQNIESPDLLEAYAFLKGLELAKNL---RCDNIILEGEAKKVVDLIHGSSQNL 254
BLAST of Lag0032908 vs. NCBI nr
Match:
XP_011470502.1 (PREDICTED: uncharacterized protein LOC105353223 [Fragaria vesca subsp. vesca])
HSP 1 Score: 94.7 bits (234), Expect = 1.2e-15
Identity = 61/242 (25.21%), Postives = 113/242 (46.69%), Query Frame = 0
Query: 17 NKKGTFTVKSAYHLVKDFNY--GLEASQSDRMRSSLFWKSIWSLKALPRSKVGVWKIVTD 76
++KG ++V+S YH+ + + + +S S WK +W + P+ ++ W+I+ +
Sbjct: 56 DQKGLYSVRSGYHVARKVEHLTTIASSSSSHGGWRSIWKKVWKVNVPPKVRLHAWRILRE 115
Query: 77 IIPTKANIQSKGIAIQASCAICGKGKETTSHLINKIIHNNIIPAAKALQITIE----VNI 136
++PTK ++ KG+ + C CG+ KE H+ N + +L +T + I
Sbjct: 116 VLPTKWALKKKGVDLSVECPFCGRDKEDGLHIFKSCRVVNQLWECSSLTLTPSTHPAMEI 175
Query: 137 KERIFTFDKQQ-NSRTRSQVSQATWERPKSNQWKLNSDAGWFEKDGRGGIGWIVRDSTGS 196
K + + K + +S+ + W P S + K+N D + E RGG+G +VRD+ G
Sbjct: 176 KAWVDEYIKYHCRTGKQSRRTHTKWRCPPSGRLKINIDGSFIELQERGGMGVVVRDNNGD 235
Query: 197 TMCFGMKAITNPWPIKMLEAQAILEGLNC-IKDTCKQRQIPLVIESDTLEVIKVLNKEEE 251
A P P+ + +E L + +Q + ESD ++KV ++E
Sbjct: 236 CRA----AFARPIPVALSALHTEVEALRAGLLIAVQQGWDEVEFESDCAALVKVFQGDDE 293
BLAST of Lag0032908 vs. NCBI nr
Match:
XP_030930729.1 (uncharacterized protein LOC115956517 [Quercus lobata])
HSP 1 Score: 91.7 bits (226), Expect = 1.0e-14
Identity = 67/253 (26.48%), Postives = 123/253 (48.62%), Query Frame = 0
Query: 10 DEITRFPNKKGTFTVKSAYHLVKDF----NYGLEASQSDRMRSSLFWKSIWSLKALPRSK 69
D I NKKG+F VKSAY++ K ++G E+S D S WK +W L + +
Sbjct: 113 DSIIWLGNKKGSFLVKSAYYVAKRILEKEDHG-ESSLGDVCAS--LWKRMWHLNIPGKIR 172
Query: 70 VGVWKIVTDIIPTKANIQSKGIAIQASCAICGKGKETTSHLI--------NKIIHNN--- 129
+ W++ + IPT N+ KGI + +C IC K ET H I N++++ N
Sbjct: 173 IFAWRLCMNAIPTLTNLFKKGIQMDVTCPICKKDPETVEHAIISVSAKAVNQVVNENGGV 232
Query: 130 IIPAAKALQITIEVNIKERIFTFDKQQNSRTRSQVSQATWERPKSNQWKLNSDAGWFEKD 189
+ L I + + KE +++ ++ R+ W+ P + + +N D K+
Sbjct: 233 VAELVWGLAIRLIEDFKEANIQIIEKKGTKDRA------WKPPPKDVYLINVDGAIPAKE 292
Query: 190 GRGGIGWIVRDSTGSTMCFGMKAITNPWPIKMLEAQAILEGLNCIKDTCKQRQIPLVIES 247
G GIG I+RD + K ++ + ++ EA A+ +G+ K+ + +++E
Sbjct: 293 GNSGIGVIIRDWNNQVVAALSKPLSGRFAVEETEAIAMEQGIVLAKELGLNQ---IILEG 352
BLAST of Lag0032908 vs. NCBI nr
Match:
OMO52016.1 (reverse transcriptase [Corchorus capsularis])
HSP 1 Score: 89.7 bits (221), Expect = 3.8e-14
Identity = 64/263 (24.33%), Postives = 119/263 (45.25%), Query Frame = 0
Query: 9 RDEITRFPNKKGTFTVKSAYHLVKDFNYGLEASQSDRMRSSLFWKSIWSLKALPRSKVGV 68
RD + + G F+VKSAY++ +D ++ Q R ++ WK +WS + +P+
Sbjct: 1115 RDCLIWNATRMGEFSVKSAYYVARDVLRRADSLQGPRQQT---WKLVWSSQIMPKIHFFT 1174
Query: 69 WKIVTDIIPTKANIQSKGIAIQASCAICGKGKETTSHL-----INKIIHNNIIPA----- 128
W+++ +I+PTK N+ +G+ + C +CGK E+ H+ ++++ + + P
Sbjct: 1175 WRLIWNILPTKGNLVFRGLDVPQLCEVCGKQPESVFHVFFRCKFSELVWDRVGPCVNLTL 1234
Query: 129 --------------AKALQITIEVNIKERIFTFDKQQNSRTRSQVSQATWERPKSNQWKL 188
AKA I + + + T N+R ++ Q TW P K+
Sbjct: 1235 DQWNSDGDWWDFFIAKATSIG---QLDKVLITLWLIWNNRNKALYEQLTWIPPPMGIVKI 1294
Query: 189 NSDAGWFEKDGRGGIGWIVRDSTGSTMCFGMKAITNPWPIKMLEAQAILEGLNCIKDTCK 248
N+D + G G+G ++RDS G + + + E A+L G +
Sbjct: 1295 NTDVAFCSSSGEAGLGVVIRDSAGKIIICASRCLNFIADSLYAEVHALLFGFELAIEHGI 1354
BLAST of Lag0032908 vs. ExPASy TrEMBL
Match:
A0A1R3G1P9 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_29422 PE=4 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 1.8e-14
Identity = 64/263 (24.33%), Postives = 119/263 (45.25%), Query Frame = 0
Query: 9 RDEITRFPNKKGTFTVKSAYHLVKDFNYGLEASQSDRMRSSLFWKSIWSLKALPRSKVGV 68
RD + + G F+VKSAY++ +D ++ Q R ++ WK +WS + +P+
Sbjct: 1115 RDCLIWNATRMGEFSVKSAYYVARDVLRRADSLQGPRQQT---WKLVWSSQIMPKIHFFT 1174
Query: 69 WKIVTDIIPTKANIQSKGIAIQASCAICGKGKETTSHL-----INKIIHNNIIPA----- 128
W+++ +I+PTK N+ +G+ + C +CGK E+ H+ ++++ + + P
Sbjct: 1175 WRLIWNILPTKGNLVFRGLDVPQLCEVCGKQPESVFHVFFRCKFSELVWDRVGPCVNLTL 1234
Query: 129 --------------AKALQITIEVNIKERIFTFDKQQNSRTRSQVSQATWERPKSNQWKL 188
AKA I + + + T N+R ++ Q TW P K+
Sbjct: 1235 DQWNSDGDWWDFFIAKATSIG---QLDKVLITLWLIWNNRNKALYEQLTWIPPPMGIVKI 1294
Query: 189 NSDAGWFEKDGRGGIGWIVRDSTGSTMCFGMKAITNPWPIKMLEAQAILEGLNCIKDTCK 248
N+D + G G+G ++RDS G + + + E A+L G +
Sbjct: 1295 NTDVAFCSSSGEAGLGVVIRDSAGKIIICASRCLNFIADSLYAEVHALLFGFELAIEHGI 1354
BLAST of Lag0032908 vs. ExPASy TrEMBL
Match:
A0A6P9E8H5 (uncharacterized protein LOC118347698 OS=Juglans regia OX=51240 GN=LOC118347698 PE=4 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 1.8e-14
Identity = 75/256 (29.30%), Postives = 113/256 (44.14%), Query Frame = 0
Query: 9 RDEITRFPNKKGTFTVKSAYHLVKDFNYGLEASQSDRMRSSLFWKSIWSLKALPRSKVGV 68
+D++ +K G F+V SAY L D L+ S W IW+L K+ +
Sbjct: 570 QDKLFWGSSKIGEFSVGSAYFLQLDRLKSLQGESSREGSKDEKWSIIWNLTVPNSVKIFL 629
Query: 69 WKIVTDIIPTKANIQSKGIAIQASCAICGKGKETTSHLINKIIHNNIIPA---------- 128
WK+ +++PTK N+ + I + SC IC ET H I + N I A
Sbjct: 630 WKVGNNLLPTKENLFKRKIVTEKSCTICFAESETIMHAIWECPAANDIWADKDRFPKTVL 689
Query: 129 AKALQITIEVNIKERIFTFDKQQNSRTRSQVSQATWERPKSNQWKLNSDAGWFEKDGRGG 188
KA + +E + + KQ R R + WE+P + K+N DA KD R G
Sbjct: 690 QKASEPLVEYKAAQALLQQTKQSQVRGRGDLK---WEKPAAGLVKINWDASLDVKDRRMG 749
Query: 189 IGWIVRDSTGSTM---CFGMKAITNPWPIKMLEAQAILEGLNCIKDTCKQRQIP-LVIES 248
+G I+RD G + C + + NP + E+ A+ L D C + I + E
Sbjct: 750 VGIIIRDEEGEALVAVCDQKEHVDNP---MVAESYALRVAL----DVCGELNIQRAIFEG 809
Query: 249 DTLEVIKVLNKEEEDL 251
D VI +++E EDL
Sbjct: 810 DAKSVITAVHREAEDL 815
BLAST of Lag0032908 vs. ExPASy TrEMBL
Match:
A0A6J5UV01 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS32434 PE=4 SV=1)
HSP 1 Score: 89.0 bits (219), Expect = 3.1e-14
Identity = 72/257 (28.02%), Postives = 119/257 (46.30%), Query Frame = 0
Query: 20 GTFTVKSAY----HLVKDFNYGL----EASQSDRMRSSLFWKSIWSLKALPRSKVGVWKI 79
G +TV+S Y L ++ G E+SQ D+ R WKSIW L+ P+ + +WK
Sbjct: 898 GGYTVRSGYAVALTLRRNGELGRKAEGESSQGDKQRR--IWKSIWGLQVPPKIRTFLWKC 957
Query: 80 VTDIIPTKANIQSKGIAIQASCAICGKGKETTSHLI---------NKIIHNNIIPAAKAL 139
+++ K N+ GI ++ +CA+CG+ E+ ++ ++ H N I +
Sbjct: 958 CRNVLAVKENLLHWGIDVETTCALCGQEGESQDFIVCWENLLKKYEQVEHCNDILQGTVI 1017
Query: 140 QITIEVN-IKERIFTFDKQQ-------NSRTRSQVSQA----TWERPKSNQWKLNSDAGW 199
+ + V ++ F Q N R QA +W + K+N DA W
Sbjct: 1018 EPHVAVECFLNQVHEFRTAQMHGKPLINELPRPPEIQAETVTSWRKLPYGVLKVNCDAAW 1077
Query: 200 FEKDGRGGIGWIVRDSTGSTMCFGMKAITNPWPIKMLEAQAILEG-LNCIKDTCKQRQIP 247
+ GG+GW+VRDS G + G K +EA+AI E L C++ +
Sbjct: 1078 VSQTQMGGVGWVVRDSYGWMVQAGCKGDMRGGSALAMEAKAIREALLACVQSGLSK---- 1137
BLAST of Lag0032908 vs. ExPASy TrEMBL
Match:
Q75M12 (Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. japonica OX=39947 GN=P0431G05.11 PE=4 SV=1)
HSP 1 Score: 88.2 bits (217), Expect = 5.3e-14
Identity = 60/240 (25.00%), Postives = 106/240 (44.17%), Query Frame = 0
Query: 10 DEITRFPNKKGTFTVKSAYHLVKDFNYGLEASQSDRMRSSLFWKSIWSLKALPRSKVGVW 69
D I P+K G F+V+SAY L S S R + W+ IW + ++ W
Sbjct: 1639 DFIAWHPDKTGRFSVRSAYKLALQLADMNNCSSSSSSRLNKSWELIWKCNVPQKVRIFAW 1698
Query: 70 KIVTDIIPTKANIQSKGIAIQASCAICGKGKETTSHLINKIIHNNIIPAAKALQITIEVN 129
++ ++ + T N + + + C IC + KE H + + +H A +L + +E
Sbjct: 1699 RVASNSLATMENKKKRNLERFDVCGICDREKEDAGHALCRCVH------ANSLWVNLEKG 1758
Query: 130 IKERIFTFDKQQNSRTRSQVSQATWERPKSNQWKLNSDAGWFEKDGRGGIGWIVRDSTGS 189
F K + WERP++ KLN D + +GGIG I+R+ G+
Sbjct: 1759 KYVVSVNFPKTTAIKHTPGAENRRWERPRNGWMKLNVDGSFDINSEKGGIGMILRNCLGN 1818
Query: 190 TMCFGMKAITNPWPIKMLEAQAILEGLNCIKDTCKQRQIPLVIESDTLEVIKVLNKEEED 249
+ +++ + E A +EGL+ +P+ +E+D VI++LN ++D
Sbjct: 1819 VIFSSCRSLDSCSGPLEAELHACVEGLHL---ALHWTLLPIQVETDCSSVIQLLNHPDKD 1869
BLAST of Lag0032908 vs. ExPASy TrEMBL
Match:
A0A1R3IUT4 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_09629 PE=4 SV=1)
HSP 1 Score: 85.1 bits (209), Expect = 4.5e-13
Identity = 57/231 (24.68%), Postives = 105/231 (45.45%), Query Frame = 0
Query: 20 GTFTVKSAYHLVKDFNYGLEASQSDRMRSSLFWKSIWSLKALPRSKVGVWKIVTDIIPTK 79
G++TV+S Y++ + + DR S W+ IWS LP+ K W+++ DI+PTK
Sbjct: 626 GSYTVRSGYYVARSLLGHDDIHVDDR---SPVWRLIWSAHVLPKVKYFFWRVIQDILPTK 685
Query: 80 ANIQSKGIAIQASCAICGKGKETTSHLINKIIHNNIIPAAKALQITIEVNIKERIFTFDK 139
+Q +G+ I +C +CG + + H+ + + + + + + E +F +
Sbjct: 686 PQLQRRGVPIDLNCVVCGGNESSLYHVFFECTFSRQVWVIACPWLPVYLESYEYGASFRR 745
Query: 140 QQNSRTRSQVSQATWERPKSNQWKLNSDAGWFEKDGRGGIGWIVRDSTGSTMCFGMKAIT 199
+ S+T + + W P + K+N+DA + + +G + RD+ G + G+ IT
Sbjct: 746 DRQSQT---IVRQQWTPPTQGRVKINTDAAFSQHRQEAALGVVFRDTDGHVLLSGITRIT 805
Query: 200 NPWPIKMLEAQAILEGLNCIKDTCKQRQIPLVIESDTLEVIKVLNKEEEDL 251
N E I GL + +ESD+L LN++ L
Sbjct: 806 NVPNSLFAEMYTIRFGLLL---ALSYSFVTCEVESDSLLANIELNRQTPSL 847
BLAST of Lag0032908 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 49.7 bits (117), Expect = 4.1e-06
Identity = 38/108 (35.19%), Postives = 61/108 (56.48%), Query Frame = 0
Query: 145 TRSQVSQAT---WERPKSNQW-KLNSDAGWFEKDGRGGIGWIVRDSTGSTMCFGMKAITN 204
T+ QV++++ W RP +QW K N+DA W + R GIGW++R+ G G +A+
Sbjct: 408 TKPQVNRSSCGRW-RPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARAL-- 467
Query: 205 PWPIKMLEAQAILEGLNCIKDTCKQRQIPLVI-ESDTLEVIKVLNKEE 248
P +LEA+ LE + + + Q VI ESD+ +I++LN +E
Sbjct: 468 PKLKSVLEAE--LEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNNDE 510
BLAST of Lag0032908 vs. TAIR 10
Match:
AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 46.2 bits (108), Expect = 4.5e-05
Identity = 29/95 (30.53%), Postives = 50/95 (52.63%), Query Frame = 0
Query: 154 WERPKSNQWKLNSDAGWFEKDGRGGIGWIVRDSTGSTMCFGMKAITNPWPIKMLEAQAIL 213
W+ P K N+DA W ++ R GIGWI+R+ +G + G +A+ P +LEA+ L
Sbjct: 137 WKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARAL--PRTKNVLEAE--L 196
Query: 214 EGLN-CIKDTCKQRQIPLVIESDTLEVIKVLNKEE 248
E L + + ++ ESD ++ +LN ++
Sbjct: 197 EALRWAVLTMSRFNYKRIIFESDAQALVNLLNSDD 227
BLAST of Lag0032908 vs. TAIR 10
Match:
AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 43.1 bits (100), Expect = 3.8e-04
Identity = 19/53 (35.85%), Postives = 33/53 (62.26%), Query Frame = 0
Query: 55 IWSLKALPRSKVGVWKIVTDIIPTKANIQSKGIAIQASCAICGKGKETTSHLI 108
IWSLK P+ K+ +WK + + +P A + S+ I+I+ C C + ET +H++
Sbjct: 9 IWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRC-RDFETITHIL 60
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_042974784.1 | 5.7e-18 | 28.97 | uncharacterized protein LOC122306423 [Carya illinoinensis] | [more] |
KAF7837133.1 | 2.4e-16 | 29.71 | uncharacterized protein G2W53_005615 [Senna tora] | [more] |
XP_011470502.1 | 1.2e-15 | 25.21 | PREDICTED: uncharacterized protein LOC105353223 [Fragaria vesca subsp. vesca] | [more] |
XP_030930729.1 | 1.0e-14 | 26.48 | uncharacterized protein LOC115956517 [Quercus lobata] | [more] |
OMO52016.1 | 3.8e-14 | 24.33 | reverse transcriptase [Corchorus capsularis] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1R3G1P9 | 1.8e-14 | 24.33 | Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_29422 PE=4 SV... | [more] |
A0A6P9E8H5 | 1.8e-14 | 29.30 | uncharacterized protein LOC118347698 OS=Juglans regia OX=51240 GN=LOC118347698 P... | [more] |
A0A6J5UV01 | 3.1e-14 | 28.02 | Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=... | [more] |
Q75M12 | 5.3e-14 | 25.00 | Reverse transcriptase domain-containing protein OS=Oryza sativa subsp. japonica ... | [more] |
A0A1R3IUT4 | 4.5e-13 | 24.68 | Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_09629 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |
AT4G29090.1 | 4.1e-06 | 35.19 | Ribonuclease H-like superfamily protein | [more] |
AT2G34320.1 | 4.5e-05 | 30.53 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
AT3G26855.1 | 3.8e-04 | 35.85 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |