Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTAAAGCTACAGCCTCTGTTGCCTTCCTCCTCTCTCTCAATCTCCTCTTCTTCTCCCTTGTCTCAGCCTGCAACAACTGCTATGTCCCTGCCCCACCCAAGCCCAAGCCATGCCCTCCAGTGCCAAAGCCCACCCCTTCATCTGGCTATGGAAAGTGCCCTAGGGACACCCTTAAACTCGGCGTCTGCGCCAAGCTCCTCGGTGGCCTCGTCGACGTTACCATCGGCAAGCCCCCGGTGGCGCCGTGCTGCAGCCTGATCGAAGGCCTTGCTGATCTTGAAGCTGCTGTCTGCCTTTGCACTGCCATTAAGGCCAATGTTTTGGGCAACAAACTCAACATCCCTGTCTCACTCAGCTTGCTTCTCAATGTTTGCAAGAAGAATGTTCCCAAGGGATTCAAGTGCTGA
mRNA sequence
ATGGCTTCTAAAGCTACAGCCTCTGTTGCCTTCCTCCTCTCTCTCAATCTCCTCTTCTTCTCCCTTGTCTCAGCCTGCAACAACTGCTATGTCCCTGCCCCACCCAAGCCCAAGCCATGCCCTCCAGTGCCAAAGCCCACCCCTTCATCTGGCTATGGAAAGTGCCCTAGGGACACCCTTAAACTCGGCGTCTGCGCCAAGCTCCTCGGTGGCCTCGTCGACGTTACCATCGGCAAGCCCCCGGTGGCGCCGTGCTGCAGCCTGATCGAAGGCCTTGCTGATCTTGAAGCTGCTGTCTGCCTTTGCACTGCCATTAAGGCCAATGTTTTGGGCAACAAACTCAACATCCCTGTCTCACTCAGCTTGCTTCTCAATGTTTGCAAGAAGAATGTTCCCAAGGGATTCAAGTGCTGA
Coding sequence (CDS)
ATGGCTTCTAAAGCTACAGCCTCTGTTGCCTTCCTCCTCTCTCTCAATCTCCTCTTCTTCTCCCTTGTCTCAGCCTGCAACAACTGCTATGTCCCTGCCCCACCCAAGCCCAAGCCATGCCCTCCAGTGCCAAAGCCCACCCCTTCATCTGGCTATGGAAAGTGCCCTAGGGACACCCTTAAACTCGGCGTCTGCGCCAAGCTCCTCGGTGGCCTCGTCGACGTTACCATCGGCAAGCCCCCGGTGGCGCCGTGCTGCAGCCTGATCGAAGGCCTTGCTGATCTTGAAGCTGCTGTCTGCCTTTGCACTGCCATTAAGGCCAATGTTTTGGGCAACAAACTCAACATCCCTGTCTCACTCAGCTTGCTTCTCAATGTTTGCAAGAAGAATGTTCCCAAGGGATTCAAGTGCTGA
Protein sequence
MASKATASVAFLLSLNLLFFSLVSACNNCYVPAPPKPKPCPPVPKPTPSSGYGKCPRDTLKLGVCAKLLGGLVDVTIGKPPVAPCCSLIEGLADLEAAVCLCTAIKANVLGNKLNIPVSLSLLLNVCKKNVPKGFKC
Homology
BLAST of Lag0032904 vs. NCBI nr
Match:
XP_022922126.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita moschata] >XP_023550963.1 14 kDa proline-rich protein DC2.15-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 259.6 bits (662), Expect = 1.5e-65
Identity = 131/139 (94.24%), Postives = 134/139 (96.40%), Query Frame = 0
Query: 1 MASKATASVAFLLSLNLLFFSLVSACNNCYVPAPPKPKPC--PPVPKPTPSSGYGKCPRD 60
MASKATAS+AFLLSLNLLFFSLVSACNNCYVPAPPKPKPC PP PKPTPSSGYGKCPRD
Sbjct: 1 MASKATASLAFLLSLNLLFFSLVSACNNCYVPAPPKPKPCPPPPYPKPTPSSGYGKCPRD 60
Query: 61 TLKLGVCAKLLGGLVDVTIGKPPVAPCCSLIEGLADLEAAVCLCTAIKANVLGNKLNIPV 120
TLKLGVCAKLLGGLVDVTIGKPPV PCCSLIEGLADLEAAVCLCTAIKA+VLGN LNIPV
Sbjct: 61 TLKLGVCAKLLGGLVDVTIGKPPVTPCCSLIEGLADLEAAVCLCTAIKASVLGNNLNIPV 120
Query: 121 SLSLLLNVCKKNVPKGFKC 138
SLSLLLNVCKKNVPKGF+C
Sbjct: 121 SLSLLLNVCKKNVPKGFQC 139
BLAST of Lag0032904 vs. NCBI nr
Match:
XP_022970161.1 (14 kDa proline-rich protein DC2.15-like [Cucurbita maxima])
HSP 1 Score: 259.6 bits (662), Expect = 1.5e-65
Identity = 130/138 (94.20%), Postives = 134/138 (97.10%), Query Frame = 0
Query: 1 MASKATASVAFLLSLNLLFFSLVSACNNCYVPAPPKPKPC-PPVPKPTPSSGYGKCPRDT 60
MASKATAS+AFLLSLNLLFFSLVSACNNCYVPAPPKPKPC PP PKPTPSSGYGKCPRDT
Sbjct: 1 MASKATASLAFLLSLNLLFFSLVSACNNCYVPAPPKPKPCPPPYPKPTPSSGYGKCPRDT 60
Query: 61 LKLGVCAKLLGGLVDVTIGKPPVAPCCSLIEGLADLEAAVCLCTAIKANVLGNKLNIPVS 120
LKLGVCAKLLGGL+DVTIGKPPV PCCSLIEGLADLEAAVCLCTAIKA+VLGN LNIPVS
Sbjct: 61 LKLGVCAKLLGGLIDVTIGKPPVTPCCSLIEGLADLEAAVCLCTAIKASVLGNNLNIPVS 120
Query: 121 LSLLLNVCKKNVPKGFKC 138
LSLLLNVCKKNVPKGF+C
Sbjct: 121 LSLLLNVCKKNVPKGFQC 138
BLAST of Lag0032904 vs. NCBI nr
Match:
XP_038906980.1 (14 kDa proline-rich protein DC2.15-like [Benincasa hispida])
HSP 1 Score: 256.1 bits (653), Expect = 1.7e-64
Identity = 126/137 (91.97%), Postives = 133/137 (97.08%), Query Frame = 0
Query: 1 MASKATASVAFLLSLNLLFFSLVSACNNCYVPAPPKPKPCPPVPKPTPSSGYGKCPRDTL 60
MASKATAS+AFLLSLNLLFFSLVSACNNCYVPAPPKPKPCPPV KP+PSSGYGKCPRDTL
Sbjct: 1 MASKATASLAFLLSLNLLFFSLVSACNNCYVPAPPKPKPCPPVVKPSPSSGYGKCPRDTL 60
Query: 61 KLGVCAKLLGGLVDVTIGKPPVAPCCSLIEGLADLEAAVCLCTAIKANVLGNKLNIPVSL 120
KLGVCAKLLGGLVD+TIGKPPV PCCSLIEGLADLEAAVCLCTAIKAN+LG LN+PVSL
Sbjct: 61 KLGVCAKLLGGLVDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKANLLGLNLNLPVSL 120
Query: 121 SLLLNVCKKNVPKGFKC 138
SLLLNVC+KNVPKGF+C
Sbjct: 121 SLLLNVCQKNVPKGFQC 137
BLAST of Lag0032904 vs. NCBI nr
Match:
XP_008437101.1 (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis melo] >KAA0039707.1 14 kDa proline-rich protein DC2.15-like [Cucumis melo var. makuwa])
HSP 1 Score: 249.2 bits (635), Expect = 2.0e-62
Identity = 125/140 (89.29%), Postives = 131/140 (93.57%), Query Frame = 0
Query: 1 MASKATASVAFLLSLNLLFFSLVSACNNCYVPAPPKPKPCP---PVPKPTPSSGYGKCPR 60
MASKAT S+AFLLSLNLLFF+LVSACNNCYVP PPKPKPCP P PKP+PSSGYGKCPR
Sbjct: 1 MASKATTSLAFLLSLNLLFFTLVSACNNCYVPEPPKPKPCPPTKPTPKPSPSSGYGKCPR 60
Query: 61 DTLKLGVCAKLLGGLVDVTIGKPPVAPCCSLIEGLADLEAAVCLCTAIKANVLGNKLNIP 120
DTLKLGVCAKLLGGLVDVTIGKPPV PCCSLIEGLADLEAAVCLCTAIKAN+LG LNIP
Sbjct: 61 DTLKLGVCAKLLGGLVDVTIGKPPVTPCCSLIEGLADLEAAVCLCTAIKANLLGLNLNIP 120
Query: 121 VSLSLLLNVCKKNVPKGFKC 138
VSLSLLLNVC+KNVPKGF+C
Sbjct: 121 VSLSLLLNVCQKNVPKGFQC 140
BLAST of Lag0032904 vs. NCBI nr
Match:
XP_004152410.2 (14 kDa proline-rich protein DC2.15 [Cucumis sativus])
HSP 1 Score: 244.2 bits (622), Expect = 6.5e-61
Identity = 119/140 (85.00%), Postives = 131/140 (93.57%), Query Frame = 0
Query: 1 MASKATASVAFLLSLNLLFFSLVSACNNCYVPAPPKPKPCP---PVPKPTPSSGYGKCPR 60
MASKAT S+AFLLSLNLLFF+LVSACNNCY+P PPKPKPCP P PKP+PSSGYGKCPR
Sbjct: 1 MASKATTSLAFLLSLNLLFFTLVSACNNCYIPDPPKPKPCPPTKPTPKPSPSSGYGKCPR 60
Query: 61 DTLKLGVCAKLLGGLVDVTIGKPPVAPCCSLIEGLADLEAAVCLCTAIKANVLGNKLNIP 120
DTLKLGVCAKLLGGL+D+TIGKPPV PCCSLIEGLADLEAAVCLCTAIKA++LG LN+P
Sbjct: 61 DTLKLGVCAKLLGGLLDITIGKPPVTPCCSLIEGLADLEAAVCLCTAIKADILGINLNVP 120
Query: 121 VSLSLLLNVCKKNVPKGFKC 138
+SLSLLLNVC+KNVPKGF+C
Sbjct: 121 LSLSLLLNVCQKNVPKGFQC 140
BLAST of Lag0032904 vs. ExPASy Swiss-Prot
Match:
P14009 (14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1)
HSP 1 Score: 165.6 bits (418), Expect = 3.9e-40
Identity = 85/137 (62.04%), Postives = 101/137 (73.72%), Query Frame = 0
Query: 1 MASKATASVAFLLSLNLLFFSLVSACNNCYVPAPPKPKPCPPVPKPTPSSGYGKCPRDTL 60
M SK +ASVA +LN+LFF+LVS+ C P PKPKP P P PTP GKCPRD L
Sbjct: 1 MGSKNSASVALFFTLNILFFALVSSTEKCPDPYKPKPKPTPK-PTPTPYPSAGKCPRDAL 60
Query: 61 KLGVCAKLLGGLVDVTIGKPPVAPCCSLIEGLADLEAAVCLCTAIKANVLGNKLNIPVSL 120
KLGVCA +L + +V IG PP PCCSL+EGL +LEAAVCLCTAIKAN+LG LN+P++L
Sbjct: 61 KLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGKNLNLPIAL 120
Query: 121 SLLLNVCKKNVPKGFKC 138
SL+LN C K VP GF+C
Sbjct: 121 SLVLNNCGKQVPNGFEC 136
BLAST of Lag0032904 vs. ExPASy Swiss-Prot
Match:
Q9SU35 (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE=1 SV=1)
HSP 1 Score: 146.0 bits (367), Expect = 3.2e-34
Identity = 80/160 (50.00%), Postives = 105/160 (65.62%), Query Frame = 0
Query: 1 MASKATASVAFLLSLNLLFFSLVSACN-NCY-------VPAP-PKPKPCPPVPKP----- 60
MASK +AS+A +LN+LFF+L A N NC VP+P PKP CPP P+P
Sbjct: 1 MASKNSASLALFFALNILFFTLTVATNCNCKPSPKPKPVPSPKPKPVQCPPPPRPSVPSP 60
Query: 61 ---------TPSSGYGKCPRDTLKLGVCAKLLGGLVDVTIGKPPVAPCCSLIEGLADLEA 120
TP S CP D LKLGVCA +L L+++ +G+P CCSLI+GL D++A
Sbjct: 61 NPRPVTPPRTPGSSGNSCPIDALKLGVCANVLSSLLNIQLGQPSSQQCCSLIQGLVDVDA 120
Query: 121 AVCLCTAIKANVLGNKLNIPVSLSLLLNVCKKNVPKGFKC 138
A+CLCTA++ANVLG LN+P+SLS+LLNVC + +P GF+C
Sbjct: 121 AICLCTALRANVLGINLNVPISLSVLLNVCNRKLPSGFQC 160
BLAST of Lag0032904 vs. ExPASy Swiss-Prot
Match:
Q39176 (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1)
HSP 1 Score: 144.8 bits (364), Expect = 7.1e-34
Identity = 81/167 (48.50%), Postives = 106/167 (63.47%), Query Frame = 0
Query: 1 MASKATASVAFLLSLNLLFFSLVSA----CNNC--YVPAP-PKPKPCP-PVPKPTPS--- 60
MASK +AS+A +LN++FF+L +A CN + P P PKPKP P P PKP PS
Sbjct: 1 MASKNSASIALFFALNIIFFTLTAATDCGCNPSPKHKPVPSPKPKPVPSPKPKPVPSPSV 60
Query: 61 -------------------SGYGKCPRDTLKLGVCAKLLGGLVDVTIGKPPVAPCCSLIE 120
G CP D L+LGVCA +L L+++ +G+P PCCSLI+
Sbjct: 61 PSPSVPSPNPRPVTPPRTPGSSGNCPIDALRLGVCANVLSSLLNIQLGQPSAQPCCSLIQ 120
Query: 121 GLADLEAAVCLCTAIKANVLGNKLNIPVSLSLLLNVCKKNVPKGFKC 138
GL DL+AA+CLCTA++ANVLG LN+P+SLS+LLNVC + VP GF+C
Sbjct: 121 GLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRKVPSGFQC 167
BLAST of Lag0032904 vs. ExPASy Swiss-Prot
Match:
Q9SU34 (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12490 PE=2 SV=1)
HSP 1 Score: 136.3 bits (342), Expect = 2.5e-31
Identity = 79/182 (43.41%), Postives = 103/182 (56.59%), Query Frame = 0
Query: 1 MASKATASVAFLLSLNLLFFSLVSACN----------------------------NCYVP 60
MASK +AS+A +LN+LFF+L + N + YVP
Sbjct: 1 MASKNSASLALFFALNILFFTLTAGTNCRCNPSPKPRPLPNPKVPSPKVPTPSVPSPYVP 60
Query: 61 AP-----------------PKPKPCPPVPKPTPSSGYGKCPRDTLKLGVCAKLLGGLVDV 120
P P P P P +P TP S G CP D L+LGVCA +L GL++V
Sbjct: 61 TPSVPSPSVPTPSVPSPSVPSPNPTPVIPPRTPGSS-GNCPIDALRLGVCANVLSGLLNV 120
Query: 121 TIGKPPVAPCCSLIEGLADLEAAVCLCTAIKANVLGNKLNIPVSLSLLLNVCKKNVPKGF 138
+G+P PCCSLI+GL DL+AAVCLCTA++ANVLG LN+P+SLS+LLNVC + +P F
Sbjct: 121 QLGQPSPQPCCSLIQGLVDLDAAVCLCTALRANVLGINLNVPISLSVLLNVCNRRLPSNF 180
BLAST of Lag0032904 vs. ExPASy Swiss-Prot
Match:
Q9SU33 (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g12500 PE=2 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 9.6e-31
Identity = 77/176 (43.75%), Postives = 100/176 (56.82%), Query Frame = 0
Query: 1 MASKATASVAFLLSLNLLFFSLVSA----CN----------------------------- 60
MASK + S+A +LN+LFF+L +A CN
Sbjct: 1 MASKNSTSLALFFALNILFFTLTTATDCRCNLSPKPRTVPSPKVPSPKYPSPSIPSPSVP 60
Query: 61 NCYVPAPPKPKPCPPVPKPTP------SSGYGKCPRDTLKLGVCAKLLGGLVDVTIGKPP 120
VP P P P P P PTP G CP D L+LGVCA +L GL++V +G+P
Sbjct: 61 TPSVPTPSVPTPSVPSPNPTPVTPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPS 120
Query: 121 VAPCCSLIEGLADLEAAVCLCTAIKANVLGNKLNIPVSLSLLLNVCKKNVPKGFKC 138
PCCSLI+GL DL+AA+CLCTA++ANVLG LN+P+SLS+LLNVC + +P F+C
Sbjct: 121 AQPCCSLIQGLVDLDAAICLCTALRANVLGINLNVPISLSVLLNVCNRRLPSDFQC 176
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022922126.1 | 1.5e-65 | 94.24 | 14 kDa proline-rich protein DC2.15-like [Cucurbita moschata] >XP_023550963.1 14 ... | [more] |
XP_022970161.1 | 1.5e-65 | 94.20 | 14 kDa proline-rich protein DC2.15-like [Cucurbita maxima] | [more] |
XP_038906980.1 | 1.7e-64 | 91.97 | 14 kDa proline-rich protein DC2.15-like [Benincasa hispida] | [more] |
XP_008437101.1 | 2.0e-62 | 89.29 | PREDICTED: 14 kDa proline-rich protein DC2.15-like [Cucumis melo] >KAA0039707.1 ... | [more] |
XP_004152410.2 | 6.5e-61 | 85.00 | 14 kDa proline-rich protein DC2.15 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
P14009 | 3.9e-40 | 62.04 | 14 kDa proline-rich protein DC2.15 OS=Daucus carota OX=4039 PE=2 SV=1 | [more] |
Q9SU35 | 3.2e-34 | 50.00 | pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana OX=3702 GN=AZI1 PE... | [more] |
Q39176 | 7.1e-34 | 48.50 | Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV... | [more] |
Q9SU34 | 2.5e-31 | 43.41 | pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g124... | [more] |
Q9SU33 | 9.6e-31 | 43.75 | pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g125... | [more] |