Lag0032902 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0032902
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr11: 38735860 .. 38737849 (-)
RNA-Seq ExpressionLag0032902
SyntenyLag0032902
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAACTTGGAGGTGAAACTTTTCGATGAAGTAAACCGCGACAAGAAGCTTCATAGTAGCGTCCCGTCACGTATGAAGAGGAAATTCTCTGTTCTCATAACTACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTGTCTTGACTAATCCTATAAATGAAGGATCTGATCAAGACCATGATAAAGATAAGAGCTTTTAAAATGTAAAAGCTCCTTATCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTGAGAGCAAAAAAAAAAAAAAAAAAAAAATTGAACTACGTTATGACTTGATCCCTTTTCTTCAAAGGGTACGTAGGCAGCTTAAAGAAAACTTTAAGTTCAGTCTCTCCAAACAAAAAAAAAAATGCAACAAACATTGAACACGACAGTACAAATTGAAGAAGTTAATCACTACTGGGGCAACACAACAAATTGAAGTTGTGCAACGTTATGAATATGAAGCTACGAGTTGGATGAATAAAAGAAGATTTCATTCCTCCAAATTCAATGCCTCGCTAGCCTCAAGTTCGGTGTTTCACTCACCCTAAGTTCGTGCATTCCTTCTCTTCAAGTTCGAAGGTTCTCACATGTTTCGCTGCAGTTCCTTTTCTCCAAGTACGAAGGTGCTCATTCTCCAAGTTCGAAGGCTCTTACATTGCTGCGATGCAGTTCTTTCCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGCCGTAGTTCCTTCTCTCCAAGTACGAAGGTTCTCTCCTCCAAGTACGAAGTTCTCTTCTCCAAGTACGAAGGTTCTCTCCTCCAAGTACGAAAGTTCTCTCCTCCAAGTCGAATGTTCTCTCACGTTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTTTCATGTGCTTTGTTGCAGTTCCTTCTCTCCAAGTTCAATGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGTAATTCCTTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCAAATTCGAAGGTTTTCACGCGCTTCGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTAGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCAAATTCGAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGTTTCGCCACAGTTCCCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCGTTCCTTCACGCGCTTCGCCACAGTTCCCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCGTTCCTTCCTCCAAGTTCGAAGGTTTTCACGCGCATCGCCACAGTTCCCCTTCCTCCAAGTTCGAAGGTTCTCACGCACTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTCCTCATGCTTCGCTCGGCTGCACTGCTGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCTCACGCTGTGCTGCTTCCTTCTCCAAGTTCGAAGGTCCTCATGCTACGCTCGGCTACACTGCTGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCCTGCACTCATGCTGA

mRNA sequence

ATGGACAACTTGGAGGTGAAACTTTTCGATGAAGTAAACCGCGACAAGAAGCTTCATAGTAGCGTCCCGTCACGTATGAAGAGGAAATTCTCTGTTCTCATAACTACAGAAGGTTCCTTGAAGTTCCTTTTCTCCAAGTACGAAGGTGCTCATTCTCCAAGTTCGAAGGCTCTTACATTGCTGCGATGCAGTTCTTTCCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGCCGTAGTTCCTTCTCTCCAAGTACGAAGGTTCTCTCCTCCAAGTACGAAGTTCTCTTCTCCAAGTACGAAGGTTCTCTCCTCCAAGTACGAAAGTTCTCTCCTCCAAGTCGAATGTTCTCTCACGTTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTTTCATGTGCTTTGTTGCAGTTCCTTCTCTCCAAGTTCAATGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGTAATTCCTTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGCTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTAGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCAAATTCGAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGTTTCGCCACAGTTCCCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCGTTCCTTCACGCGCTTCGCCACAGTTCCCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCGTTCCTTCCTCCAAGTTCGAAGGTTTTCACGCGCATCGCCACAGTTCCCCTTCCTCCAAGTTCGAAGGTTCTCACGCACTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTCCTCATGCTTCGCTCGGCTGCACTGCTGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCTCACGCTGTGCTGCTTCCTTCTCCAAGTTCGAAGGTCCTCATGCTACGCTCGGCTACACTGCTGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCCTGCACTCATGCTGA

Coding sequence (CDS)

ATGGACAACTTGGAGGTGAAACTTTTCGATGAAGTAAACCGCGACAAGAAGCTTCATAGTAGCGTCCCGTCACGTATGAAGAGGAAATTCTCTGTTCTCATAACTACAGAAGGTTCCTTGAAGTTCCTTTTCTCCAAGTACGAAGGTGCTCATTCTCCAAGTTCGAAGGCTCTTACATTGCTGCGATGCAGTTCTTTCCTCCAAGTTCGAAGGTTCTCACGTTGCTTCGCCGTAGTTCCTTCTCTCCAAGTACGAAGGTTCTCTCCTCCAAGTACGAAGTTCTCTTCTCCAAGTACGAAGGTTCTCTCCTCCAAGTACGAAAGTTCTCTCCTCCAAGTCGAATGTTCTCTCACGTTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTTTCATGTGCTTTGTTGCAGTTCCTTCTCTCCAAGTTCAATGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGTAATTCCTTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGCTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTAGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCAAATTCGAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGTTTCGCCACAGTTCCCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCGTTCCTTCACGCGCTTCGCCACAGTTCCCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCGTTCCTTCCTCCAAGTTCGAAGGTTTTCACGCGCATCGCCACAGTTCCCCTTCCTCCAAGTTCGAAGGTTCTCACGCACTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTCCTCATGCTTCGCTCGGCTGCACTGCTGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCTCACGCTGTGCTGCTTCCTTCTCCAAGTTCGAAGGTCCTCATGCTACGCTCGGCTACACTGCTGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCCTGCACTCATGCTGA

Protein sequence

MDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFLFSKYEGAHSPSSKALTLLRCSSFLQVRRFSRCFAVVPSLQVRRFSPPSTKFSSPSTKVLSSKYESSLLQVECSLTLLRCSSFLQVRRFSCALLQFLLSKFNGSHALRAVPSSKFEGSHALRCNSFPKFEGSHALRAVPSSKFEAPSSKFEGSHALSSAIPSPKFEGSHALRAVPSSKFEGSHALRCISFPQIRRFSRASLQLLPPSSKVLTRFALQFLPPSSKVLTRFVQFLPPNSKVLTRFVAFPSPNSKVLTRIATVPSSKFEGSHAHRHSSFLQVRRFSRASPQFLPPSSKVHTRFATVPLPPSSKVLTRVPSRASPQFPFLQVRRFSRAFLPPSSKVFTRIATVPLPPSSKVLTHFVAVPSSKFEGPHASLGCTAALLPKVQRRQLSSRCAASFSKFEGPHATLGYTAALLPKVQRRQLSLHSC
Homology
[Close]
BLAST of Lag0032902 vs. NCBI nr
Match: XP_009061288.1 (hypothetical protein LOTGIDRAFT_126799, partial [Lottia gigantea] >ESO87973.1 hypothetical protein LOTGIDRAFT_126799, partial [Lottia gigantea])

HSP 1 Score: 72.8 bits (177), Expect = 9.0e-09
Identity = 70/218 (32.11%), Postives = 110/218 (50.46%), Query Frame = 0 

Query: 188 PSSKFEGSHALSSAIPSPKFEGSHALRAV-PSSKFEGSHALRCISFPQIRRFSRASLQLL 247
           PSSK   ++ + S  PS K   ++ +  + PS+K   ++ +  +  P  +      ++LL
Sbjct: 9   PSSKLLFTYKIESLPPSSKLLLTYKIELLPPSTKLLLTYKIEPLP-PSSKLLLTYKIELL 68

Query: 248 PPSSKVLTRFALQFLPPSSKVLTRF-VQFLPPNSKVLT--RFVAFPSPNSKVLT-RIATV 307
           PPS+K+L  + ++ LPPSSK+L  + ++ LPP+SK+L   +    PS +  +LT +I  +
Sbjct: 69  PPSTKLLLTYKIEPLPPSSKLLLTYKIELLPPSSKLLLTYKIELLPSSSKLLLTYKIGLL 128

Query: 308 PSSKFEGSHAHRHSSFLQVRRFSRASPQFLPPSSKVHTRFATVPLPPSSKVLTRVPSRAS 367
           P S          S  L   +      + LPPSSK+   +    LPPSSK+L        
Sbjct: 129 PPS----------SKLLFTYKI-----EPLPPSSKLLLTYKIESLPPSSKLLHTYKIELL 188

Query: 368 PQFPFLQVRRFSRAFLPPSSKVFTRIATVPLPPSSKVL 401
           P    L +  +    LPPSSK+       PLPPSSK+L
Sbjct: 189 PSSSKL-LLTYKIGLLPPSSKLLLTYKIEPLPPSSKLL 209

[Close]
BLAST of Lag0032902 vs. ExPASy TrEMBL
Match: V3ZAI0 (Uncharacterized protein (Fragment) OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_126799 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.3e-09
Identity = 70/218 (32.11%), Postives = 110/218 (50.46%), Query Frame = 0 

Query: 188 PSSKFEGSHALSSAIPSPKFEGSHALRAV-PSSKFEGSHALRCISFPQIRRFSRASLQLL 247
           PSSK   ++ + S  PS K   ++ +  + PS+K   ++ +  +  P  +      ++LL
Sbjct: 9   PSSKLLFTYKIESLPPSSKLLLTYKIELLPPSTKLLLTYKIEPLP-PSSKLLLTYKIELL 68

Query: 248 PPSSKVLTRFALQFLPPSSKVLTRF-VQFLPPNSKVLT--RFVAFPSPNSKVLT-RIATV 307
           PPS+K+L  + ++ LPPSSK+L  + ++ LPP+SK+L   +    PS +  +LT +I  +
Sbjct: 69  PPSTKLLLTYKIEPLPPSSKLLLTYKIELLPPSSKLLLTYKIELLPSSSKLLLTYKIGLL 128

Query: 308 PSSKFEGSHAHRHSSFLQVRRFSRASPQFLPPSSKVHTRFATVPLPPSSKVLTRVPSRAS 367
           P S          S  L   +      + LPPSSK+   +    LPPSSK+L        
Sbjct: 129 PPS----------SKLLFTYKI-----EPLPPSSKLLLTYKIESLPPSSKLLHTYKIELL 188

Query: 368 PQFPFLQVRRFSRAFLPPSSKVFTRIATVPLPPSSKVL 401
           P    L +  +    LPPSSK+       PLPPSSK+L
Sbjct: 189 PSSSKL-LLTYKIGLLPPSSKLLLTYKIEPLPPSSKLL 209

[Close]
BLAST of Lag0032902 vs. ExPASy TrEMBL
Match: A0A6Q2XP57 (Uncharacterized protein OS=Esox lucius OX=8010 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.0e-05
Identity = 46/100 (46.00%), Postives = 53/100 (53.00%), Query Frame = 0 

Query: 145 GSHALRAVPSSKFEGSHALRCNSFPKFEGSHALRAVPSSKFEAPSSKFEGSHALSSAIPS 204
           GSHALR    +  EGSHALR  S    EGSHALR    +  E   +  EGSHAL     +
Sbjct: 170 GSHALREGSHALREGSHALREGSHALREGSHALREGSHALREGSHALREGSHALREGSHA 229

Query: 205 PKFEGSHALRAVPSSKFEGSHALRCISFPQIRRFSRASLQ 245
            + EGSHALR    +  EGSHALR  S  +       SLQ
Sbjct: 230 LR-EGSHALREGSHALREGSHALREGSHARAASGDSGSLQ 268

The following BLAST results are available for this feature:
BLAST of Lag0032902 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_009061288.19.0e-0932.11hypothetical protein LOTGIDRAFT_126799, partial [Lottia gigantea] >ESO87973.1 hy... [more]
BLAST of Lag0032902 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0032902 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
V3ZAI04.3e-0932.11Uncharacterized protein (Fragment) OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_12... [more]
A0A6Q2XP575.0e-0546.00Uncharacterized protein OS=Esox lucius OX=8010 PE=4 SV=1[more]
BLAST of Lag0032902 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0032902.1Lag0032902.1mRNA