Lag0032858 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAATTTTTGGTGGGGCAGCTCAGAACAAGGGAGGAAAATTCACTGGTTGAAATGGGAGTCAATGACAAAGCCGAAGGATAGAGGAGGGATGGGGTTCAGAGACATAAGACTGTTTAACCAGGCTTTGTTGGCAAAACATACATGGAGGCTTTTATACAGACCTCAATCTCTGTTGGCTCAAATCCTAAAAGCCAGATATTACCCACAAGGAGATTTCCTTAAAACAAACCTGGGAAGCAGACCATCATATGTCTGGAGGGGGATCATATGGGGAAGAGAACTAGCCATGAAGGGAGGACGCTGA ATGGCTAATTTTTGGTGGGGCAGCTCAGAACAAGGGAGGAAAATTCACTGGTTGAAATGGGAGTCAATGACAAAGCCGAAGGATAGAGGAGGGATGGGGTTCAGAGACATAAGACTGTTTAACCAGGCTTTGTTGGCAAAACATACATGGAGGCTTTTATACAGACCTCAATCTCTGTTGGCTCAAATCCTAAAAGCCAGATATTACCCACAAGGAGATTTCCTTAAAACAAACCTGGGAAGCAGACCATCATATGTCTGGAGGGGGATCATATGGGGAAGAGAACTAGCCATGAAGGGAGGACGCTGA ATGGCTAATTTTTGGTGGGGCAGCTCAGAACAAGGGAGGAAAATTCACTGGTTGAAATGGGAGTCAATGACAAAGCCGAAGGATAGAGGAGGGATGGGGTTCAGAGACATAAGACTGTTTAACCAGGCTTTGTTGGCAAAACATACATGGAGGCTTTTATACAGACCTCAATCTCTGTTGGCTCAAATCCTAAAAGCCAGATATTACCCACAAGGAGATTTCCTTAAAACAAACCTGGGAAGCAGACCATCATATGTCTGGAGGGGGATCATATGGGGAAGAGAACTAGCCATGAAGGGAGGACGCTGA MANFWWGSSEQGRKIHWLKWESMTKPKDRGGMGFRDIRLFNQALLAKHTWRLLYRPQSLLAQILKARYYPQGDFLKTNLGSRPSYVWRGIIWGRELAMKGGR Homology
BLAST of Lag0032858 vs. NCBI nr
Match: XP_013709208.1 (uncharacterized protein LOC106412876 [Brassica napus]) HSP 1 Score: 145.6 bits (366), Expect = 2.4e-31 Identity = 64/102 (62.75%), Postives = 77/102 (75.49%), Query Frame = 0
BLAST of Lag0032858 vs. NCBI nr
Match: XP_013654036.2 (uncharacterized protein LOC106358780 [Brassica napus]) HSP 1 Score: 144.8 bits (364), Expect = 4.0e-31 Identity = 63/102 (61.76%), Postives = 77/102 (75.49%), Query Frame = 0
BLAST of Lag0032858 vs. NCBI nr
Match: XP_013654011.1 (uncharacterized protein LOC106358754 [Brassica napus]) HSP 1 Score: 144.4 bits (363), Expect = 5.3e-31 Identity = 64/102 (62.75%), Postives = 76/102 (74.51%), Query Frame = 0
BLAST of Lag0032858 vs. NCBI nr
Match: XP_018479968.1 (PREDICTED: uncharacterized protein LOC108851032 [Raphanus sativus]) HSP 1 Score: 144.4 bits (363), Expect = 5.3e-31 Identity = 59/100 (59.00%), Postives = 77/100 (77.00%), Query Frame = 0
BLAST of Lag0032858 vs. NCBI nr
Match: XP_010513742.1 (PREDICTED: uncharacterized protein LOC104789794 [Camelina sativa]) HSP 1 Score: 142.9 bits (359), Expect = 1.5e-30 Identity = 62/100 (62.00%), Postives = 76/100 (76.00%), Query Frame = 0
BLAST of Lag0032858 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.8e-26 Identity = 50/101 (49.50%), Postives = 74/101 (73.27%), Query Frame = 0
BLAST of Lag0032858 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.2e-08 Identity = 26/66 (39.39%), Postives = 40/66 (60.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|