Lag0032847 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0032847
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	protein cornichon homolog 4-like
Location	chr11: 38169705 .. 38174009 (-)
RNA-Seq Expression	Lag0032847
Synteny	Lag0032847

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTCGAGATATCCTCTTCAATGGCGAAGAAGTGTTTATATACCTGTTTCTACCTTAGGTTTTTAGGCATTCGGAGGCGATCCAAGGCTGAACCAAGTCAAACTGGGCTGACCCACGACATGGGTCTCAACCTCGGCCTTGGCCCAAACCTTCGGTATGGTATATATTGGGGTAGTCCAAAATGACCTATAACATAAGATAATATGAAAAATATGAGTATAATTTAATAAATACATCTATTAATATTTTAAAGAAGCCAAAGTGAACATAACTTAATGGTAAATAGCATGTACTCTTAGTCGATATTAGAGGTTTGAATCTCCACATCCTAAATGTCGTTGCATTTATAAAAAACAATAAGATTCTAGAAATAGATGGATCAATCCTCCTCTTCTCAAAAAAAAAAAAAAAAAAAACCAATCCTCCTGTAGACTAAAAATAATAATAATAATAAAAGAATTAAGAAAAAAATTGTTCAGGGAAAATAGAAAAAAAAATCGCCCACCGTGGGGCTCGAACCCACGACCACAAGGTTAAGAGCCTTGCGCTCTACCAACTGAGCTAGACGGGCTTATTGTCTAAACGTCACATAACACTATTATTAAATGATATAAAATAATTGTATTTGGTTCAACAACATTTGTTAGTTTTTATTTATTTATTTTTTCCAATTACAATAATACTATAGTATTCAATAACAATTTTATGTCCCATAATTACTATTTTTTCGAATTGTTAACATATAAAGGGAGGGATTTGAATCCTTGACCAAGTCAAGGGTGTATGATTTAAGTAGTTGAGTTATGCTTCATTTACATATCATAATTAAACTAATTTATTGATTAATCAAAATACTTTTTCTATCTTGAGCATATATTTGTAGTTAAGACATCTACTCATTCTCTCGAAGTCGAATGTACACTACAAATATGAGAATGATGATTTCAACTTCAAACTTTAAGATAATGAGTATATGTTTTAATCATTTAACTATGCCCATATCGACTAATATTGTCTAATATAAATTAAACATTCACAATTGAAAAAATTATTCAATGGGGTTGTCACAACATGTCTCTAATAACCATTAGTTGTAAATTTAAAATTTGTATGTCACTAATAATCATTTGATACAAGTTCAAAATATAAAATATGATGTATGTTTGATTAGAGGCGTCTTGGCAACTTCGTTTGATGTAGATTTCCAAGCATCAATTGCTGAGGGTATTCGACTAGCGATTTCTTTGGAATGTAATAGACTTCTGGTGGATTCAAATTGCCTTCAAGCTGTGAACGTAAAGTCTGAATCGTGGAGTGAAGTGGGTGTTTTAGTGGAAGATATTTGGCTTCAGCTGAGTTTTTTGAATGATATTTCTTTTTCTTTTATTGTGTAATCTAGTTCTTGATGCCATTTTTAAGAAGGCTAAACTTGATAGTCTTAGTGGAGTTTGGATCCATTCTTTTCAAGGATGGATATGTTTGTTGGTTGATTAGGCCTTTGTTTTTCATTTGCGGCGTTTATAAAAATGGTTATTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTAAAATACTATTACGTTTCTAGTATTAAAGTTTTTCTTGTATCGAGAGAATTAAACCAAGTATTCTATAATTCTCGAAAGTTCAAAGTTGAAACTAACATTTACCATTTTATGAGTTTGCATGTATCTCGAGCCCAAATTTGAGAGCTTTTGCCATTTACTCTGCTCCCTTAAGCGACGAGTCAGATGAACACGAAGCACGTAAATTCAAGTGTAAAAATGACAAGTTATCTTAAGGTTAAAAGGACAATTTTGTAATATTTATGAATACAAAGGGACATGCTTGTAATTGGAGCATCATCTTCAATTTTAGGGTTGTGAATCACGATTCAAAATACATAGAGAGAGAAAGGGAAAACGCAAAAAACAGAGAAGAAAGAGGGGAAATTGACAAAAAATGACCCCCAGTGTTTTGGTTTTGGAAAAAATGACCCCTTTAGAAACAATGTTTTTTTGGACCCCTTGAGAATCTCACGCAGGCACTCTCGTTTCCTCCATGTCCCTTAGTCAATGAAGCAACGAATGTTTTTGATACTTCAATTACATCAAATATGGATATATATTTTTAAAAAACATATATAATATAATCATAATTGACCGAGACAATCGAGAATCCCGGTCCGTCTTGGTGCCCATTCAAGCATCCCGCCCGAGATGCTTCATCTAGAAACGAAAAAACTCACTTCGAAATCATGAAATAAGTCCAATTTTTTAGTTAAAAAAAAAAACTTAGAAAGCGCCGAAAACATAGTGTGTACAATCAAATCAAGCTAAATTTCAACAAATTTGGTCGATCCTAGAATGTACCAAACACATTAAAACCTTAGAAAAGTGAAAAACAAAAAAACGAAAAAAGTTTTTTAGAGCAATAATGATTGATCTTCGGTCGTTTAAGCACCAAATGTTCGCACGAACTCGCCAGAAATTTGAAGTAAGAGATGATCGAGGGAGAAGACGAGAGGGAAGCAAATGTCATTTCAAATGGAAGAGAGTTTTTGTGAAATTTTTTGGAGTCAGGGGTATTTTCGTTATTTTACATGTTCTCTGAAATTAAAAGGGTCTAATGAAAACTAAAAAAACAAAAAGGGATCCAATTTTACCAACATAAACTTTAGGGTCCATTTTTGTCAATAACCCAAGGAGATTGCAGCCGCCGGTCTTGAATTTCTGTGTTCAGTGTCGTTGGGCTTTGTTTTTCCGGCCGGTTAGGGGCTTAGTATCGTGCTGCAGTGGGTCTCGGTTTTGAGGACAGAATCGCCGTGGGTCTGGTTGAAACGTCGTGGGTAGCGCCGGTTTCTGAGGGTCTCGGTTCTGAGATCGTTTCCTCGCCGGTGTGTCGCCGTTGGGTCTCGATTAAGGAGGCTGGTTGTTCGGGCTGTTGGTCTCGGTTTAGAGCACTGCAGTGTGCCTTGGTTTGTGCAACTAAATAGGCGAGAGGGTCGGTGTCTTTCCGGTAAAGCATCAGGCAGCGATTGTGTTGTGTGTCTCAGCATTCTCCGGTTAATCACAGGTGGCTTAGCTTGTTTTGCGCTGGGTTGTAGTCTATAAACACTAGCTATCCGTTTTTGCATGCTTACATGGGTTCATTGGGCTTGTGCTACAGCATAGATATCTCAATTCGGTTGTACCGTGTCTATGATACTAGCATTCCCTACATTTGAATACTTGAATTGACATTCTGTATTGCTAATTGCCTAATACCATTGGTGAAACAATGTTGGAACTGAGGAACTTATGATGCTTTTAAAACTTGTTGCAGCTAATGTGCTTAGCTGATCTTGAGTTTGATTATATCAATCCTTATGACTCCTCATCACGGATAAACAAAGTGGTTGTACCTGAGTTCATCACTCAAGGAGTCTTGGGTATCTTCTATCTTTTAACAGGGCATTGGATTATGTCATTCTTTTGTGTGCCCTACCTCTATTACAATTTACGATTGTAAGTTTATCTAATTCTTGCATCTTTGATTGGATTGTTTATATAGAGAAGTATGGCAGCAGCCTGTATAATTTTTTTTTTTAAAAAAAAGAGAGAAAAAACGAGGAGGTGAGGTAGGATTGCATAATTTTTAGTGGGGTATATGCGTTATGTTGGTTGTCAATTTGATCTATCAGAACCTCATCTATTATTCTGGGCTCTGGATTCCAAATGAAGGACGAATTGTTTATTTTGAAAGAGAGGGCTTATCTCTTGTATAAAAAGAAGAGAGGGCTCATCATTCTCTGGTAAACACTTGGTTGCCAAGTGCTTAGTGGATGGCGGGTGAAAACATCTAAGTATTGGACGCTAAAGCCTTTTACTTTGAATGTATAAATTGTTTTAAAGCACCAATATTCTCTTCTGAAATTTAGAATAATATCAATAGTTTTCAGATAAGTTAAATGTGTCGAGATGGTTGAGAGTCTAAGGCGGTCTCATGGTTGGTTAGTCTCTTTGGAGATTCACACTACAGTAGTGTGACTGAAACTAATTTACAATGGTTATCAAGATAAACCAAACTGAAATATAGCATATTTGAGATTGGGTTGGTGAGCATATGGCTTAATACTCAACTTGTTCGTTGCTGGTATTCATGACAAGCTTCCTGATCTGTCTGATGTGTGTTTTTCTCATGATTACCAGGTACAGTCAGCGAAAGCACCTGGTAGACGTTCATCAGATTTATGAGTTGCATGAATCTCGAGCCCAAATTAAACCAAATATTTTGCCATTTACTCTGCCCCCTTAA

mRNA sequence

ATGGAGTTCGAGATATCCTCTTCAATGGCGAAGAAGTGTTTATATACCTGTTTCTACCTTAGGTTTTTAGGCATTCGGAGGCGATCCAAGGCTGAACCAAGTCAAACTGGGCTGACCCACGACATGGGTCTCAACCTCGGCCTTGGCCCAAACCTTCGAGGCGTCTTGGCAACTTCGTTTGATGTAGATTTCCAAGCATCAATTGCTGAGGGTATTCGACTAGCGATTTCTTTGGAATGTAATAGACTTCTGGTGGATTCAAATTGCCTTCAAGCTGTGAACGTAAAGTCTGAATCGTGGAGTGAATATCGTGCTGCAGTGGGTCTCGGTTTTGAGGACAGAATCGCCGTGGGTCTGGTTGAAACGTCGTGGGTAGCGCCGGTTTCTGAGGGTCTCGGTTCTGAGATCGTTTCCTCGCCGGTGTGTCGCCGTTGGGTCTCGATTAAGGAGGCTGGTTGTTCGGGCTGTTGGTCTCGGTTTAGAGCACTGCAGTGTGCCTTGCTAATGTGCTTAGCTGATCTTGAGTTTGATTATATCAATCCTTATGACTCCTCATCACGGATAAACAAAGTGGTTGTACCTGAGTTCATCACTCAAGGAGTCTTGGGTATCTTCTATCTTTTAACAGGGCATTGGATTATGTCATTCTTTTGTGTGCCCTACCTCTATTACAATTTACGATTAACCTCATCTATTATTCTGGGCTCTGGATTCCAAATGAAGGACGAATTGTTTATTTTGAAAGAGAGGGCTTATCTCTTGTATAAAAAGAAGAGAGGGCTCATCATTCTCTGGTACAGTCAGCGAAAGCACCTGGTAGACGTTCATCAGATTTATGAGTTGCATGAATCTCGAGCCCAAATTAAACCAAATATTTTGCCATTTACTCTGCCCCCTTAA

Coding sequence (CDS)

ATGGAGTTCGAGATATCCTCTTCAATGGCGAAGAAGTGTTTATATACCTGTTTCTACCTTAGGTTTTTAGGCATTCGGAGGCGATCCAAGGCTGAACCAAGTCAAACTGGGCTGACCCACGACATGGGTCTCAACCTCGGCCTTGGCCCAAACCTTCGAGGCGTCTTGGCAACTTCGTTTGATGTAGATTTCCAAGCATCAATTGCTGAGGGTATTCGACTAGCGATTTCTTTGGAATGTAATAGACTTCTGGTGGATTCAAATTGCCTTCAAGCTGTGAACGTAAAGTCTGAATCGTGGAGTGAATATCGTGCTGCAGTGGGTCTCGGTTTTGAGGACAGAATCGCCGTGGGTCTGGTTGAAACGTCGTGGGTAGCGCCGGTTTCTGAGGGTCTCGGTTCTGAGATCGTTTCCTCGCCGGTGTGTCGCCGTTGGGTCTCGATTAAGGAGGCTGGTTGTTCGGGCTGTTGGTCTCGGTTTAGAGCACTGCAGTGTGCCTTGCTAATGTGCTTAGCTGATCTTGAGTTTGATTATATCAATCCTTATGACTCCTCATCACGGATAAACAAAGTGGTTGTACCTGAGTTCATCACTCAAGGAGTCTTGGGTATCTTCTATCTTTTAACAGGGCATTGGATTATGTCATTCTTTTGTGTGCCCTACCTCTATTACAATTTACGATTAACCTCATCTATTATTCTGGGCTCTGGATTCCAAATGAAGGACGAATTGTTTATTTTGAAAGAGAGGGCTTATCTCTTGTATAAAAAGAAGAGAGGGCTCATCATTCTCTGGTACAGTCAGCGAAAGCACCTGGTAGACGTTCATCAGATTTATGAGTTGCATGAATCTCGAGCCCAAATTAAACCAAATATTTTGCCATTTACTCTGCCCCCTTAA

Protein sequence

MEFEISSSMAKKCLYTCFYLRFLGIRRRSKAEPSQTGLTHDMGLNLGLGPNLRGVLATSFDVDFQASIAEGIRLAISLECNRLLVDSNCLQAVNVKSESWSEYRAAVGLGFEDRIAVGLVETSWVAPVSEGLGSEIVSSPVCRRWVSIKEAGCSGCWSRFRALQCALLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLRLTSSIILGSGFQMKDELFILKERAYLLYKKKRGLIILWYSQRKHLVDVHQIYELHESRAQIKPNILPFTLPP

Homology

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BLAST of Lag0032847 vs. NCBI nr
Match: XP_023532889.1 (protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >XP_023532890.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >KAG6606147.1 Protein cornichon-like 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 129.0 bits (323), Expect = 6.7e-26
Identity = 70/112 (62.50%), Postives = 73/112 (65.18%), Query Frame = 0


Query: 168 LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLR 227
           LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVL IFYLLTGHWIMSFFCVPYLYYNLR
Sbjct: 25  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLTGHWIMSFFCVPYLYYNLR 84

Query: 228 LTSSIILGSGFQMKDELFILKERAYLLYKKKRGLIILWYSQRKHLVDVHQIY 280
           L                                     Y+QRKHLVDV +I+
Sbjct: 85  L-------------------------------------YTQRKHLVDVTEIF 99

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BLAST of Lag0032847 vs. NCBI nr
Match: XP_022996131.1 (protein cornichon homolog 4-like [Cucurbita maxima] >XP_022996132.1 protein cornichon homolog 4-like [Cucurbita maxima])

HSP 1 Score: 127.9 bits (320), Expect = 1.5e-25
Identity = 69/112 (61.61%), Postives = 73/112 (65.18%), Query Frame = 0


Query: 168 LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLR 227
           LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVL IFYLLTGHWIMSFFC+PYLYYNLR
Sbjct: 25  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLTGHWIMSFFCLPYLYYNLR 84

Query: 228 LTSSIILGSGFQMKDELFILKERAYLLYKKKRGLIILWYSQRKHLVDVHQIY 280
           L                                     Y+QRKHLVDV +I+
Sbjct: 85  L-------------------------------------YTQRKHLVDVTEIF 99

[Close]

BLAST of Lag0032847 vs. NCBI nr
Match: XP_022957749.1 (protein cornichon homolog 4-like [Cucurbita moschata])

HSP 1 Score: 127.1 bits (318), Expect = 2.5e-25
Identity = 68/112 (60.71%), Postives = 73/112 (65.18%), Query Frame = 0


Query: 168 LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLR 227
           LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVL IFYLLTGHWIMSFFCVPYLYYNLR
Sbjct: 25  LMCLADLEFDYINPYDSSSRINKVVIPEFITQGVLCIFYLLTGHWIMSFFCVPYLYYNLR 84

Query: 228 LTSSIILGSGFQMKDELFILKERAYLLYKKKRGLIILWYSQRKHLVDVHQIY 280
           L                                     Y+QR+HLVDV +I+
Sbjct: 85  L-------------------------------------YTQREHLVDVTEIF 99

[Close]

BLAST of Lag0032847 vs. NCBI nr
Match: XP_022922295.1 (protein cornichon homolog 4-like [Cucurbita moschata] >XP_023551139.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >KAG6579448.1 Protein cornichon-like 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016921.1 Protein cornichon-like 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-24
Identity = 67/112 (59.82%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 168 LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLR 227
           LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVL IFYLLTGHWIMS FCVPYLYYN+R
Sbjct: 25  LMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLCIFYLLTGHWIMSLFCVPYLYYNIR 84

Query: 228 LTSSIILGSGFQMKDELFILKERAYLLYKKKRGLIILWYSQRKHLVDVHQIY 280
           L                                     Y+QRKHLVDV +I+
Sbjct: 85  L-------------------------------------YTQRKHLVDVTEIF 99

[Close]

BLAST of Lag0032847 vs. NCBI nr
Match: XP_038907022.1 (protein cornichon homolog 4-like [Benincasa hispida])

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-24
Identity = 67/112 (59.82%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 168 LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLR 227
           LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVL IFYLL+GHWIMS FC+PYLYYNLR
Sbjct: 25  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWIMSLFCIPYLYYNLR 84

Query: 228 LTSSIILGSGFQMKDELFILKERAYLLYKKKRGLIILWYSQRKHLVDVHQIY 280
           L                                     Y+QRKHLVDV +I+
Sbjct: 85  L-------------------------------------YTQRKHLVDVTEIF 99

[Close]

BLAST of Lag0032847 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 108.6 bits (270), Expect = 1.2e-22
Identity = 57/114 (50.00%), Postives = 67/114 (58.77%), Query Frame = 0


Query: 168 LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLR 227
           L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVL +FYLLTGHW M+  C+PYLYYN  
Sbjct: 17  LVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFH 76

Query: 228 LTSSIILGSGFQMKDELFILKERAYLLYKKKRGLIILWYSQRKHLVDVHQIYEL 282
           L                                     YS+R+HLVDV +I+ L
Sbjct: 77  L-------------------------------------YSKRQHLVDVTEIFNL 93

[Close]

BLAST of Lag0032847 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.2e-22
Identity = 57/114 (50.00%), Postives = 67/114 (58.77%), Query Frame = 0


Query: 168 LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLR 227
           L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVL +FYLLTGHW M+  C+PYLYYN  
Sbjct: 25  LVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFH 84

Query: 228 LTSSIILGSGFQMKDELFILKERAYLLYKKKRGLIILWYSQRKHLVDVHQIYEL 282
           L                                     YS+R+HLVDV +I+ L
Sbjct: 85  L-------------------------------------YSKRQHLVDVTEIFNL 101

[Close]

BLAST of Lag0032847 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.2e-19
Identity = 54/100 (54.00%), Postives = 65/100 (65.00%), Query Frame = 0


Query: 168 LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLR 227
           L+ LADLEFDYINPYDS+SRIN VV+PE I QG L +FYL+TGHW M+  CVPYLYYN  
Sbjct: 25  LISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVTGHWFMALLCVPYLYYNFH 84

Query: 228 LTSSIILGSGFQMKDELFILKERAYLL-YKKKRGLIILWY 267
           L         +  K  L  + E   LL ++KK+ L  L Y
Sbjct: 85  L---------YSRKQHLIDVTEIFNLLDWEKKKRLFKLAY 115

[Close]

BLAST of Lag0032847 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 1.0e-16
Identity = 39/61 (63.93%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 168 LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLR 227
           L CLADLEFD INPYD SSRIN++V+PEF  QG+L ++Y+LTGHW M+   +P+L+YN+R
Sbjct: 25  LTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLYYILTGHWFMAVLSLPHLFYNIR 84

Query: 228 L 229
           L
Sbjct: 85  L 85

[Close]

BLAST of Lag0032847 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.8e-11
Identity = 30/61 (49.18%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 168 LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLR 227
           ++CL DLE DY+NP+++S+RIN++V+PEFI QG L + +LLT HW+     VP   Y+  
Sbjct: 26  VICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLLFLLTWHWVFFLVAVPVTVYHAM 85

Query: 228 L 229
           L
Sbjct: 86  L 86

[Close]

BLAST of Lag0032847 vs. ExPASy TrEMBL
Match: A0A6J1K131 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111491445 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 7.2e-26
Identity = 69/112 (61.61%), Postives = 73/112 (65.18%), Query Frame = 0


Query: 168 LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLR 227
           LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVL IFYLLTGHWIMSFFC+PYLYYNLR
Sbjct: 25  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLTGHWIMSFFCLPYLYYNLR 84

Query: 228 LTSSIILGSGFQMKDELFILKERAYLLYKKKRGLIILWYSQRKHLVDVHQIY 280
           L                                     Y+QRKHLVDV +I+
Sbjct: 85  L-------------------------------------YTQRKHLVDVTEIF 99

[Close]

BLAST of Lag0032847 vs. ExPASy TrEMBL
Match: A0A6J1H2W0 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111459200 PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.2e-25
Identity = 68/112 (60.71%), Postives = 73/112 (65.18%), Query Frame = 0


Query: 168 LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLR 227
           LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVL IFYLLTGHWIMSFFCVPYLYYNLR
Sbjct: 25  LMCLADLEFDYINPYDSSSRINKVVIPEFITQGVLCIFYLLTGHWIMSFFCVPYLYYNLR 84

Query: 228 LTSSIILGSGFQMKDELFILKERAYLLYKKKRGLIILWYSQRKHLVDVHQIY 280
           L                                     Y+QR+HLVDV +I+
Sbjct: 85  L-------------------------------------YTQREHLVDVTEIF 99

[Close]

BLAST of Lag0032847 vs. ExPASy TrEMBL
Match: A0A6J1E8A9 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111430316 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 6.1e-25
Identity = 67/112 (59.82%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 168 LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLR 227
           LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVL IFYLLTGHWIMS FCVPYLYYN+R
Sbjct: 25  LMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLCIFYLLTGHWIMSLFCVPYLYYNIR 84

Query: 228 LTSSIILGSGFQMKDELFILKERAYLLYKKKRGLIILWYSQRKHLVDVHQIY 280
           L                                     Y+QRKHLVDV +I+
Sbjct: 85  L-------------------------------------YTQRKHLVDVTEIF 99

[Close]

BLAST of Lag0032847 vs. ExPASy TrEMBL
Match: A0A6J1I130 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111468923 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.8e-24
Identity = 66/112 (58.93%), Postives = 71/112 (63.39%), Query Frame = 0


Query: 168 LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLR 227
           LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVL  FYLLTGHWIMS FCVPYLYYN+R
Sbjct: 25  LMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCFFYLLTGHWIMSLFCVPYLYYNIR 84

Query: 228 LTSSIILGSGFQMKDELFILKERAYLLYKKKRGLIILWYSQRKHLVDVHQIY 280
           L                                     Y+QRKHLVDV +I+
Sbjct: 85  L-------------------------------------YTQRKHLVDVTEIF 99

[Close]

BLAST of Lag0032847 vs. ExPASy TrEMBL
Match: A0A6J1DX47 (protein cornichon homolog 4 OS=Momordica charantia OX=3673 GN=LOC111024886 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.0e-24
Identity = 66/112 (58.93%), Postives = 71/112 (63.39%), Query Frame = 0


Query: 168 LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLR 227
           LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVL IFYLLTGHWIMS FC PYLYYNLR
Sbjct: 25  LMCLADLEFDYINPYDSSSRINKVVLPEFITQGVLCIFYLLTGHWIMSLFCAPYLYYNLR 84

Query: 228 LTSSIILGSGFQMKDELFILKERAYLLYKKKRGLIILWYSQRKHLVDVHQIY 280
           L                                     Y+QR+HLVDV +I+
Sbjct: 85  L-------------------------------------YTQRQHLVDVTEIF 99

[Close]

BLAST of Lag0032847 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 108.6 bits (270), Expect = 8.7e-24
Identity = 57/114 (50.00%), Postives = 67/114 (58.77%), Query Frame = 0


Query: 168 LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLR 227
           L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVL +FYLLTGHW M+  C+PYLYYN  
Sbjct: 17  LVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFH 76

Query: 228 LTSSIILGSGFQMKDELFILKERAYLLYKKKRGLIILWYSQRKHLVDVHQIYEL 282
           L                                     YS+R+HLVDV +I+ L
Sbjct: 77  L-------------------------------------YSKRQHLVDVTEIFNL 93

[Close]

BLAST of Lag0032847 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 108.6 bits (270), Expect = 8.7e-24
Identity = 57/114 (50.00%), Postives = 67/114 (58.77%), Query Frame = 0


Query: 168 LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLR 227
           L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVL +FYLLTGHW M+  C+PYLYYN  
Sbjct: 25  LVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYYNFH 84

Query: 228 LTSSIILGSGFQMKDELFILKERAYLLYKKKRGLIILWYSQRKHLVDVHQIYEL 282
           L                                     YS+R+HLVDV +I+ L
Sbjct: 85  L-------------------------------------YSKRQHLVDVTEIFNL 101

[Close]

BLAST of Lag0032847 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 95.9 bits (237), Expect = 5.9e-20
Identity = 54/100 (54.00%), Postives = 65/100 (65.00%), Query Frame = 0


Query: 168 LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLR 227
           L+ LADLEFDYINPYDS+SRIN VV+PE I QG L +FYL+TGHW M+  CVPYLYYN  
Sbjct: 25  LISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVTGHWFMALLCVPYLYYNFH 84

Query: 228 LTSSIILGSGFQMKDELFILKERAYLL-YKKKRGLIILWY 267
           L         +  K  L  + E   LL ++KK+ L  L Y
Sbjct: 85  L---------YSRKQHLIDVTEIFNLLDWEKKKRLFKLAY 115

[Close]

BLAST of Lag0032847 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 89.0 bits (219), Expect = 7.2e-18
Identity = 39/61 (63.93%), Postives = 51/61 (83.61%), Query Frame = 0


Query: 168 LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLR 227
           L CLADLEFD INPYD SSRIN++V+PEF  QG+L ++Y+LTGHW M+   +P+L+YN+R
Sbjct: 25  LTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLYYILTGHWFMAVLSLPHLFYNIR 84

Query: 228 L 229
           L
Sbjct: 85  L 85

[Close]

BLAST of Lag0032847 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 70.9 bits (172), Expect = 2.0e-12
Identity = 30/61 (49.18%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 168 LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLGIFYLLTGHWIMSFFCVPYLYYNLR 227
           ++CL DLE DY+NP+++S+RIN++V+PEFI QG L + +LLT HW+     VP   Y+  
Sbjct: 26  VICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLLFLLTWHWVFFLVAVPVTVYHAM 85

Query: 228 L 229
           L
Sbjct: 86  L 86

The following BLAST results are available for this feature:

BLAST of Lag0032847 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532889.1	6.7e-26	62.50	protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >XP_023532890.1 pr...	[more]
XP_022996131.1	1.5e-25	61.61	protein cornichon homolog 4-like [Cucurbita maxima] >XP_022996132.1 protein corn...	[more]
XP_022957749.1	2.5e-25	60.71	protein cornichon homolog 4-like [Cucurbita moschata]	[more]
XP_022922295.1	1.3e-24	59.82	protein cornichon homolog 4-like [Cucurbita moschata] >XP_023551139.1 protein co...	[more]
XP_038907022.1	1.3e-24	59.82	protein cornichon homolog 4-like [Benincasa hispida]	[more]

BLAST of Lag0032847 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3EDD7	1.2e-22	50.00	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234...	[more]
Q84W04	1.2e-22	50.00	Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV...	[more]
Q8GWT5	8.2e-19	54.00	Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV...	[more]
Q9SZ74	1.0e-16	63.93	Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV...	[more]
Q9C7D7	2.8e-11	49.18	Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV...	[more]

BLAST of Lag0032847 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K131	7.2e-26	61.61	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111491445 PE=...	[more]
A0A6J1H2W0	1.2e-25	60.71	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111459200 P...	[more]
A0A6J1E8A9	6.1e-25	59.82	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111430316 P...	[more]
A0A6J1I130	1.8e-24	58.93	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111468923 PE=...	[more]
A0A6J1DX47	3.0e-24	58.93	protein cornichon homolog 4 OS=Momordica charantia OX=3673 GN=LOC111024886 PE=3 ...	[more]

BLAST of Lag0032847 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12340.1	8.7e-24	50.00	Cornichon family protein	[more]
AT1G12390.1	8.7e-24	50.00	Cornichon family protein	[more]
AT1G62880.1	5.9e-20	54.00	Cornichon family protein	[more]
AT4G12090.1	7.2e-18	63.93	Cornichon family protein	[more]
AT3G12180.1	2.0e-12	49.18	Cornichon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 154..255 e-value: 1.6E-17 score: 74.2
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 163..279 e-value: 1.1E-21 score: 77.4
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 167..230
None	No IPR available	PANTHER	PTHR12290:SF30	PROTEIN CORNICHON HOMOLOG 2-RELATED	coord: 167..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0032847.1	Lag0032847.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016020	membrane