Lag0032688 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0032688
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionheavy metal-associated isoprenylated plant protein 3-like
Locationchr11: 36248692 .. 36249910 (-)
RNA-Seq ExpressionLag0032688
SyntenyLag0032688
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGTGAGTTTCAGAACTCTGTTTTCTAAATGGGTTTTCTTTATCTCTCTGTTTTCTTCTTCTTATCGAGTTACTTTTTCTCGGAGTATTTGATTTTACTGACAGAACGATTCTCTCTTTGCAGAAAGTGGTGCTGAAATTGGACTTACATGATGACAGAGGAAAGCAAAAGGCCTTGAAAGCAGTTTCTTCCCTTCAAGGTAACCAATTACTCTTACAACTTCTTTCATTCTTGTTCTTTCTTTGAGAAATGAACTGATGAGTCGAATTTTTTCTCTCTTTTAACTTGCAGGAATCGAATCGATTGCCATGGACATGAAGGACAAGAAGCTAACGGTAATTGGGGGTGTTGATCCAGTTGCTGTGGTTGCTAAGGTTCGAAAGCATTGGCCGAACTCCGACATCGTCAGCGTCGGGCCGGCCAAGGAGGAGAAGAAGGGCCCGCCGAAAGAACCAGTGAAGCCCCCAAGAGCGAGAGTGAAAAGATGGAAGAGATGCTTGCATGGTACAAAAAGCATGGCTATCCTGGCTATGGTCCTAATTACTATGTGTATAGTGTAGATGAGAATCCTAATGCTTGTGTCATATGTTGAATGGATCAATAAATTTGAGAGTCTATAGAAAACTACATAGAATGTGTTATTCATTTTGGGGATTCACAATCTTTCCGCTCTCTTTTTCGTCTTCCTTCATTCCCTATTAATCGTTTCTTGACTTTTTGATGTCGATAAGTATATTGAGTTATGATCACATTGACATTTGAATCAAATTAGTTTGAAGGAAAAACTGTAGTTAAAATTGGAACTATTATCTTTACAAGTTAAAAATATGACATCGGTATAATCATACATCCCTGAATAAACTAATTTAATACAAACAAGGAGGGAGACGTTTCTCGTTTGGTATGATCCATTTAAATCTTATATAAATGAGGAGTATATTCATAATGATTAAATCATTATTATATAGCTATAGCTCAACTGTCATAAAGTCGTATTGATAACCATGAGGTTTGTGGTTTAAATTCTCCTCCCCACATATTATTAAAAAAAAAAATTATTTTCATTTTGTACTAAAGAAAAGATCATCGTTGCATCATCATTATTTTATGGGGAATTGTGTTAAATGGCTACAAAAAAAAGCGGTCTTGATTTTTGGCTACGGAAGTTTGGTCTTTGCAGGCGTGGCTACCGGAATAGTAGGAACTGTTTTCTAG

mRNA sequence

ATGATGAAAGTGGTGCTGAAATTGGACTTACATGATGACAGAGGAAAGCAAAAGGCCTTGAAAGCAGTTTCTTCCCTTCAAGGAATCGAATCGATTGCCATGGACATGAAGGACAAGAAGCTAACGGTAATTGGGGGTGTTGATCCAGTTGCTGTGGTTGCTAAGGTTCGAAAGCATTGGCCGAACTCCGACATCGTCAGCGTCGGGCCGGCCAAGGAGGAGAAGAAGGGCCCGCCGAAAGAACCAGTGAAGCCCCCAAGAGCGAGAGTGAAAAGATGGAAGAGATGCTTGCATGGCGTGGCTACCGGAATAGTAGGAACTGTTTTCTAG

Coding sequence (CDS)

ATGATGAAAGTGGTGCTGAAATTGGACTTACATGATGACAGAGGAAAGCAAAAGGCCTTGAAAGCAGTTTCTTCCCTTCAAGGAATCGAATCGATTGCCATGGACATGAAGGACAAGAAGCTAACGGTAATTGGGGGTGTTGATCCAGTTGCTGTGGTTGCTAAGGTTCGAAAGCATTGGCCGAACTCCGACATCGTCAGCGTCGGGCCGGCCAAGGAGGAGAAGAAGGGCCCGCCGAAAGAACCAGTGAAGCCCCCAAGAGCGAGAGTGAAAAGATGGAAGAGATGCTTGCATGGCGTGGCTACCGGAATAGTAGGAACTGTTTTCTAG

Protein sequence

MMKVVLKLDLHDDRGKQKALKAVSSLQGIESIAMDMKDKKLTVIGGVDPVAVVAKVRKHWPNSDIVSVGPAKEEKKGPPKEPVKPPRARVKRWKRCLHGVATGIVGTVF
Homology
BLAST of Lag0032688 vs. NCBI nr
Match: KAG7016991.1 (Heavy metal-associated isoprenylated plant protein 39, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 138.7 bits (348), Expect = 3.1e-29
Identity = 69/85 (81.18%), Postives = 76/85 (89.41%), Query Frame = 0

Query: 1  MMKVVLKLDLHDDRGKQKALKAVSSLQGIESIAMDMKDKKLTVIGGVDPVAVVAKVRKHW 60
          M+KVVLKLDLHDDRGKQKALK+VSSLQG+ESIAMDMKD KLTVIG VDPV VVAK+RKHW
Sbjct: 1  MIKVVLKLDLHDDRGKQKALKSVSSLQGVESIAMDMKDNKLTVIGDVDPVGVVAKLRKHW 60

Query: 61 PNSDIVSVGPAKEEKKGPPKEPVKP 86
          PN+DI++VGPAKEEK  PP  P  P
Sbjct: 61 PNADILTVGPAKEEKPTPPAAPAAP 85

BLAST of Lag0032688 vs. NCBI nr
Match: XP_023551297.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 138.7 bits (348), Expect = 3.1e-29
Identity = 69/87 (79.31%), Postives = 77/87 (88.51%), Query Frame = 0

Query: 1  MMKVVLKLDLHDDRGKQKALKAVSSLQGIESIAMDMKDKKLTVIGGVDPVAVVAKVRKHW 60
          M+KVVLKLDLHDDRGKQKALK+VSSLQG+ESIAMDMKD KLTVIG VDPV VVAK+RKHW
Sbjct: 1  MIKVVLKLDLHDDRGKQKALKSVSSLQGVESIAMDMKDNKLTVIGDVDPVGVVAKLRKHW 60

Query: 61 PNSDIVSVGPAKEEKKGPPKEPVKPPR 88
          PN+DI++VGPAKEEK   P  P  PP+
Sbjct: 61 PNADILTVGPAKEEKPTAPAAPAAPPK 87

BLAST of Lag0032688 vs. NCBI nr
Match: KAG6579531.1 (Heavy metal-associated isoprenylated plant protein 39, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 138.3 bits (347), Expect = 4.0e-29
Identity = 68/87 (78.16%), Postives = 77/87 (88.51%), Query Frame = 0

Query: 1  MMKVVLKLDLHDDRGKQKALKAVSSLQGIESIAMDMKDKKLTVIGGVDPVAVVAKVRKHW 60
          M+KVVLKLDLHDDRGKQKALKAVSSLQG+ESI+MDMKD KLTVIG VDPV V+AK+RKHW
Sbjct: 1  MIKVVLKLDLHDDRGKQKALKAVSSLQGVESISMDMKDNKLTVIGDVDPVGVIAKLRKHW 60

Query: 61 PNSDIVSVGPAKEEKKGPPKEPVKPPR 88
          PN+DI++VGPAKEEK   P  P  PP+
Sbjct: 61 PNADILTVGPAKEEKPAAPAAPPAPPK 87

BLAST of Lag0032688 vs. NCBI nr
Match: XP_022929001.1 (heavy metal-associated isoprenylated plant protein 39-like [Cucurbita moschata])

HSP 1 Score: 138.3 bits (347), Expect = 4.0e-29
Identity = 68/87 (78.16%), Postives = 77/87 (88.51%), Query Frame = 0

Query: 1  MMKVVLKLDLHDDRGKQKALKAVSSLQGIESIAMDMKDKKLTVIGGVDPVAVVAKVRKHW 60
          M+KVVLKLDLHDDRGKQKALKAVSSLQG+ESI+MDMKD KLTVIG VDPV V+AK+RKHW
Sbjct: 1  MIKVVLKLDLHDDRGKQKALKAVSSLQGVESISMDMKDNKLTVIGDVDPVGVIAKLRKHW 60

Query: 61 PNSDIVSVGPAKEEKKGPPKEPVKPPR 88
          PN+DI++VGPAKEEK   P  P  PP+
Sbjct: 61 PNADILTVGPAKEEKPAAPAAPPAPPK 87

BLAST of Lag0032688 vs. NCBI nr
Match: XP_008437333.1 (PREDICTED: heavy metal-associated isoprenylated plant protein 3-like [Cucumis melo] >KAA0042723.1 heavy metal-associated isoprenylated plant protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 137.9 bits (346), Expect = 5.3e-29
Identity = 70/81 (86.42%), Postives = 75/81 (92.59%), Query Frame = 0

Query: 1  MMKVVLKLDLHDDRGKQKALKAVSSLQGIESIAMDMKDKKLTVIGGVDPVAVVAKVRKHW 60
          MMKVV+KLDLHDD+GKQKALK+VS +QGIESIAMDMKDKKLTVIG VDPV VV KVRKHW
Sbjct: 1  MMKVVMKLDLHDDKGKQKALKSVSVVQGIESIAMDMKDKKLTVIGDVDPVDVVEKVRKHW 60

Query: 61 PNSDIVSVGPAKEEKKGPPKE 82
           N+DIVSVGPAKEEKK PPKE
Sbjct: 61 RNADIVSVGPAKEEKKAPPKE 81

BLAST of Lag0032688 vs. ExPASy Swiss-Prot
Match: O03982 (Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX=3702 GN=HIPP39 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 7.4e-26
Identity = 61/84 (72.62%), Postives = 71/84 (84.52%), Query Frame = 0

Query: 1  MMKVVLKLDLHDDRGKQKALKAVSSLQGIESIAMDMKDKKLTVIGGVDPVAVVAKVRKHW 60
          M K+VLKLDLHDDR KQKALK VS+L GI+SIAMDMK+KKLTVIG VDPV VV+K+RK+W
Sbjct: 1  MKKIVLKLDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKYW 60

Query: 61 PNSDIVSVGPAKEEKKGPPKEPVK 85
          P +DIV VGPAKE +K   +EP K
Sbjct: 61 PMTDIVLVGPAKEPEKEKKEEPKK 84

BLAST of Lag0032688 vs. ExPASy Swiss-Prot
Match: Q9LTE3 (Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX=3702 GN=HIPP12 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-10
Identity = 38/85 (44.71%), Postives = 56/85 (65.88%), Query Frame = 0

Query: 1  MMKVVLKLDLHDDRGKQKALKAVSSLQGIESIAMDMKDKKLTVIGGVDPVAVVAKVRKHW 60
          M  VVLKLD+H ++ KQKA+  V  L G+ S+  ++KD KLTV G +D   +V K++K  
Sbjct: 1  MQVVVLKLDVHCEKTKQKAMSTVCCLSGVNSV--EVKDGKLTVTGEIDAYMIVKKLKKIC 60

Query: 61 PNSDIVSVGPAKEEKKGPPKEPVKP 86
           +++ +SVGP KE +K  P +P KP
Sbjct: 61 -HTEFISVGPVKEPEKKKPDDPKKP 82

BLAST of Lag0032688 vs. ExPASy Swiss-Prot
Match: Q9LTE2 (Heavy metal-associated isoprenylated plant protein 13 OS=Arabidopsis thaliana OX=3702 GN=HIPP13 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 6.3e-09
Identity = 37/86 (43.02%), Postives = 53/86 (61.63%), Query Frame = 0

Query: 2  MKVVLKLDLHDDRGKQKALKAVSSLQGIESIAMDMKDKKLTVIGGVDPVAVVAKVRKHWP 61
          MK VL+L +H++R ++KA   VS   G+ SI MD K  K+TV+G VD   +V K+RK   
Sbjct: 4  MKAVLQLSIHEERIRKKAFVTVSRCPGVTSITMDDKTGKMTVVGEVDVPVIVMKLRK-LC 63

Query: 62 NSDIVSVGPAKEEKKGPPKEPVKPPR 88
          N+++VSV   K  +K P  E   PP+
Sbjct: 64 NTELVSVEVVKPPEKKPEPEKPAPPK 88

BLAST of Lag0032688 vs. ExPASy Swiss-Prot
Match: Q9LTE1 (Heavy metal-associated isoprenylated plant protein 14 OS=Arabidopsis thaliana OX=3702 GN=HIPP14 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 4.1e-08
Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 0

Query: 5  VLKLDLHDDRGKQKALKAVSSLQGIESIAMDMKDKKLTVIGGVDPVAVVAKVRKHWPNSD 64
          VL+L +H++R ++KAL  VS   G+ SI MD K  K+T++G VD  AVV K+RK   N++
Sbjct: 7  VLQLSIHEERTRKKALVTVSRFSGVTSITMD-KSGKMTIVGEVDVPAVVMKLRK-LCNTE 66

Query: 65 IVSVGPAKEEKKGPPKEPVKP 86
          IVSV   K   K P  EP KP
Sbjct: 67 IVSVDDVKPPVKKP--EPEKP 83

BLAST of Lag0032688 vs. ExPASy Swiss-Prot
Match: Q8GWS3 (Heavy metal-associated isoprenylated plant protein 2 OS=Arabidopsis thaliana OX=3702 GN=HIPP02 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.7e-06
Identity = 28/84 (33.33%), Postives = 51/84 (60.71%), Query Frame = 0

Query: 3  KVVLKLDLHDDRGKQKALKAVSSLQGIESIAMDMKDKKLTVIGGVDPVAVVAKVRKHWPN 62
          K+ +K+D+  ++ K   ++AV+ L+G+  +++D +   LTV+G +DPV V  +++K    
Sbjct: 5  KIEIKVDIDCEKCKHAIMEAVTELEGVNIVSLDQEKSILTVVGTMDPVCVAEQLKKINKK 64

Query: 63 SDIVSVGPAKEEKKGPPKEPVKPP 87
            ++SVGP K  K  P  +P K P
Sbjct: 65 PVVISVGPPK--KPDPKPDPKKDP 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7016991.13.1e-2981.18Heavy metal-associated isoprenylated plant protein 39, partial [Cucurbita argyro... [more]
XP_023551297.13.1e-2979.31heavy metal-associated isoprenylated plant protein 39-like [Cucurbita pepo subsp... [more]
KAG6579531.14.0e-2978.16Heavy metal-associated isoprenylated plant protein 39, partial [Cucurbita argyro... [more]
XP_022929001.14.0e-2978.16heavy metal-associated isoprenylated plant protein 39-like [Cucurbita moschata][more]
XP_008437333.15.3e-2986.42PREDICTED: heavy metal-associated isoprenylated plant protein 3-like [Cucumis me... [more]
Match NameE-valueIdentityDescription
O039827.4e-2672.62Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX... [more]
Q9LTE31.1e-1044.71Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX... [more]
Q9LTE26.3e-0943.02Heavy metal-associated isoprenylated plant protein 13 OS=Arabidopsis thaliana OX... [more]
Q9LTE14.1e-0848.15Heavy metal-associated isoprenylated plant protein 14 OS=Arabidopsis thaliana OX... [more]
Q8GWS31.7e-0633.33Heavy metal-associated isoprenylated plant protein 2 OS=Arabidopsis thaliana OX=... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 9..60
e-value: 1.7E-6
score: 28.4
NoneNo IPR availableGENE3D3.30.70.100coord: 1..74
e-value: 9.5E-24
score: 85.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..90
NoneNo IPR availablePANTHERPTHR45811:SF49COPPER TRANSPORT PROTEIN FAMILY-RELATEDcoord: 1..87
NoneNo IPR availablePANTHERPTHR45811COPPER TRANSPORT PROTEIN FAMILY-RELATEDcoord: 1..87
IPR036163Heavy metal-associated domain superfamilySUPERFAMILY55008HMA, heavy metal-associated domaincoord: 2..59

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0032688.1Lag0032688.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding