Lag0032676 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0032676
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	late embryogenesis abundant protein At1g64065
Location	chr11: 36084594 .. 36085208 (-)
RNA-Seq Expression	Lag0032676
Synteny	Lag0032676

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCCGACGAAACTTCCGGCGACCGGCCGGCGACACTCCGATCAAGGCGCAGAGCATCAGCAAAATGCATCAACACCTTCTGCATTTACCTCTTCGCCGCCGCCGCCACCGCCTGCATCGCCGCCCTGACCCTCGGCCTCGTCGTCGTCCGGGTAAAAACCCCGACGGTAAAATTAACCTCCGTCGCGGTTAAAAATCTCCACTACGGCTTCTCGCCGACCCCGTTCATGGACGCCACATTAATCGCCGAAATAGCGATCGGAAATCCGAATTTCGGGAAGTTCAGGTACGAGGAGAAAACGAACGTGACATTGATTTACTACGGCGTGGCGGTGGGAATCGGCGAGGTAAAAGGGGTCTCTGTAAATGCAAAGGGTGTAGAAGAAACGAAGCTTACAGTGAAGGTGAAACCAAATTCGAGCTTCGTTGACGTGGATTACTTTAGCGACGATTTGGCGAGGTTGAAGACGATGAATATGAGCTGCATCGCCGAGTTTGAGGGAAGGGTTTGTTTGTTGAAATTGTTTAAGGAGAAGAAAGTTTCTGTGTTGAAATGTACTATGACCTTGAATTTGACCTCCCATGGCGTCCAAAATCTTGCTTGCCTTTAG

mRNA sequence

ATGGAGGCCGACGAAACTTCCGGCGACCGGCCGGCGACACTCCGATCAAGGCGCAGAGCATCAGCAAAATGCATCAACACCTTCTGCATTTACCTCTTCGCCGCCGCCGCCACCGCCTGCATCGCCGCCCTGACCCTCGGCCTCGTCGTCGTCCGGGTAAAAACCCCGACGGTAAAATTAACCTCCGTCGCGGTTAAAAATCTCCACTACGGCTTCTCGCCGACCCCGTTCATGGACGCCACATTAATCGCCGAAATAGCGATCGGAAATCCGAATTTCGGGAAGTTCAGGTACGAGGAGAAAACGAACGTGACATTGATTTACTACGGCGTGGCGGTGGGAATCGGCGAGGTAAAAGGGGTCTCTGTAAATGCAAAGGGTGTAGAAGAAACGAAGCTTACAGTGAAGGTGAAACCAAATTCGAGCTTCGTTGACGTGGATTACTTTAGCGACGATTTGGCGAGGTTGAAGACGATGAATATGAGCTGCATCGCCGAGTTTGAGGGAAGGGTTTGTTTGTTGAAATTGTTTAAGGAGAAGAAAGTTTCTGTGTTGAAATGTACTATGACCTTGAATTTGACCTCCCATGGCGTCCAAAATCTTGCTTGCCTTTAG

Coding sequence (CDS)

ATGGAGGCCGACGAAACTTCCGGCGACCGGCCGGCGACACTCCGATCAAGGCGCAGAGCATCAGCAAAATGCATCAACACCTTCTGCATTTACCTCTTCGCCGCCGCCGCCACCGCCTGCATCGCCGCCCTGACCCTCGGCCTCGTCGTCGTCCGGGTAAAAACCCCGACGGTAAAATTAACCTCCGTCGCGGTTAAAAATCTCCACTACGGCTTCTCGCCGACCCCGTTCATGGACGCCACATTAATCGCCGAAATAGCGATCGGAAATCCGAATTTCGGGAAGTTCAGGTACGAGGAGAAAACGAACGTGACATTGATTTACTACGGCGTGGCGGTGGGAATCGGCGAGGTAAAAGGGGTCTCTGTAAATGCAAAGGGTGTAGAAGAAACGAAGCTTACAGTGAAGGTGAAACCAAATTCGAGCTTCGTTGACGTGGATTACTTTAGCGACGATTTGGCGAGGTTGAAGACGATGAATATGAGCTGCATCGCCGAGTTTGAGGGAAGGGTTTGTTTGTTGAAATTGTTTAAGGAGAAGAAAGTTTCTGTGTTGAAATGTACTATGACCTTGAATTTGACCTCCCATGGCGTCCAAAATCTTGCTTGCCTTTAG

Protein sequence

MEADETSGDRPATLRSRRRASAKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKLTSVAVKNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKGVSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVCLLKLFKEKKVSVLKCTMTLNLTSHGVQNLACL

Homology

[Close]

BLAST of Lag0032676 vs. NCBI nr
Match: XP_022970100.1 (late embryogenesis abundant protein At1g64065 [Cucurbita maxima] >KAG6579536.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016995.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 324.3 bits (830), Expect = 7.4e-85
Identity = 170/203 (83.74%), Postives = 179/203 (88.18%), Query Frame = 0


Query: 1   MEADETSGDRPATLRSRRRASAKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           M A E   DRPATLRSRR+AS KCINTFCIYLFA AA ACIAAL LGLVVVRVKTPTVKL
Sbjct: 1   MAAGEPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVKNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSV VKNLHYGFSPTPFMDATLIAEI + NPNFG+F+YEE TN TLIYYGVAVGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVCLLKLFKEK 180
           VSVNAK  +    TVKVKPNSSFVDVDYFS DLA LKTMNMSCIAEF+GRV LLKLFKEK
Sbjct: 121 VSVNAKSNKNANFTVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNLAC 204
           KVS+LKCTM+LNL+SHGVQNLAC
Sbjct: 181 KVSMLKCTMSLNLSSHGVQNLAC 203

[Close]

BLAST of Lag0032676 vs. NCBI nr
Match: XP_023550526.1 (late embryogenesis abundant protein At1g64065 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.6 bits (828), Expect = 1.3e-84
Identity = 169/203 (83.25%), Postives = 180/203 (88.67%), Query Frame = 0


Query: 1   MEADETSGDRPATLRSRRRASAKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           M A +   DRPATLRSRR+AS KCINTFCIYLFA AA ACIAAL LGLVVVRVKTPTVKL
Sbjct: 1   MAAGQPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVKNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSV VKNLHYGFSPTPFMDATLIAEI + NPNFG+F+YEE TN TLIYYGVAVGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVCLLKLFKEK 180
           VSVNAK  ++   TVKVKPNSSFVDVDYFS DLA LKTMNMSCIAEF+GRV LLKLFKEK
Sbjct: 121 VSVNAKSNKKANFTVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNLAC 204
           KVS+LKCTM+LNL+SHGVQNLAC
Sbjct: 181 KVSMLKCTMSLNLSSHGVQNLAC 203

[Close]

BLAST of Lag0032676 vs. NCBI nr
Match: XP_022929131.1 (late embryogenesis abundant protein At1g64065 [Cucurbita moschata])

HSP 1 Score: 322.0 bits (824), Expect = 3.7e-84
Identity = 169/203 (83.25%), Postives = 178/203 (87.68%), Query Frame = 0


Query: 1   MEADETSGDRPATLRSRRRASAKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           M A E   DRPATLRSRR+AS KCINTFCIYLFA AA ACIAAL LGLVVVRVKTPTVKL
Sbjct: 1   MAAGEPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVKNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSV VKNLHYGFSPTPFMDATLIAEI + NPNFG+F+YEE TN TLIYYGVAVGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVCLLKLFKEK 180
           VSVNAK  ++    VKVKPNSSFVDVDYFS DLA LKTMNMSCIAEF+GRV LLKLFKEK
Sbjct: 121 VSVNAKSNKKANFKVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNLAC 204
           KVS+LKCTM+LNL SHGVQNLAC
Sbjct: 181 KVSMLKCTMSLNLNSHGVQNLAC 203

[Close]

BLAST of Lag0032676 vs. NCBI nr
Match: XP_008437351.1 (PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo] >KAA0042715.1 late embryogenesis abundant protein [Cucumis melo var. makuwa])

HSP 1 Score: 300.1 bits (767), Expect = 1.5e-77
Identity = 155/204 (75.98%), Postives = 173/204 (84.80%), Query Frame = 0


Query: 1   MEADETSGDRPATLRSRRRASAKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           M AD+  GDRP   RSRR++S KC+N FCI LFAAAATACIAALT GLVV+RVKTPTVKL
Sbjct: 1   MAADKIPGDRPTAHRSRRKSSKKCLNAFCICLFAAAATACIAALTFGLVVLRVKTPTVKL 60

Query: 61  TSVAVKNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSVAVKNLHYGFSPTPFM+ATL  EI + NPN+G F YE   NVTLIYYGV VGIGEVK 
Sbjct: 61  TSVAVKNLHYGFSPTPFMEATLTGEITMENPNYGAFEYEGVRNVTLIYYGVVVGIGEVKR 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVCLLKLFKEK 180
           +SVNAK +E+ K  VKVKPN  FV+VDYFSDDLARLKTMNMS  AEFEG++ LLKLFKEK
Sbjct: 121 LSVNAKSIEKRKFIVKVKPNWRFVNVDYFSDDLARLKTMNMSWNAEFEGKIYLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNLACL 205
           K+SV+KC+ +LNLTSHGVQNLACL
Sbjct: 181 KISVMKCSTSLNLTSHGVQNLACL 204

[Close]

BLAST of Lag0032676 vs. NCBI nr
Match: XP_022145906.1 (late embryogenesis abundant protein At1g64065 [Momordica charantia])

HSP 1 Score: 294.3 bits (752), Expect = 8.2e-76
Identity = 152/203 (74.88%), Postives = 168/203 (82.76%), Query Frame = 0


Query: 1   MEADETSGDRPATLRSRRRASAKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           M A ETSGDRPATLRSRRRAS +CIN  CIYLFA AA AC+A L LGL VVRVKTPT KL
Sbjct: 1   MAAQETSGDRPATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKL 60

Query: 61  TSVAVKNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           +SVAVKNL YGFSP PF+DATLIAE+ I NPNFG+F+YEE T+ + IYYGVA GIGEVK 
Sbjct: 61  SSVAVKNLSYGFSPNPFVDATLIAEVTIENPNFGEFKYEENTDASFIYYGVAAGIGEVKR 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVCLLKLFKEK 180
           VSVNAKGV+ T  +V+VK N+S  DVDY S DLA LK MNMSCIAEFEGRV LLKLFKE 
Sbjct: 121 VSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKRMNMSCIAEFEGRVRLLKLFKEM 180

Query: 181 KVSVLKCTMTLNLTSHGVQNLAC 204
           KVS+LKCTMTLN +SH + NLAC
Sbjct: 181 KVSLLKCTMTLNFSSHAIHNLAC 203

[Close]

BLAST of Lag0032676 vs. ExPASy Swiss-Prot
Match: Q6DST1 (Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN=At1g64065 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.7e-13
Identity = 67/203 (33.00%), Postives = 104/203 (51.23%), Query Frame = 0


Query: 4   DETSGDRPATLRSRRRASAKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKLTSV 63
           +E SG R    R       KC+    +Y            L L  + +R+  P ++  S+
Sbjct: 20  EEQSGPR-IWRRKTEEPPGKCL----VYSLTIIVIIFALCLILSSIFLRISKPEIETRSI 79

Query: 64  AVKNLHYGFSPT-PFMDATLIAEIAIGNPNFGKFRYEEKT-NVTLIYYGVAVGIGEVKGV 123
           + ++L  G + T P+ +ATL+++I+I N NFG F +E+ T  V    +GV VG  +++G 
Sbjct: 80  STRDLRSGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSTLRVVYADHGV-VGETKIEGR 139

Query: 124 SVNA-KGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVCLLKLFKEK 183
            V A K V  T + V++  +   +D      DL RL  + +  +AE  GR+ +L   K  
Sbjct: 140 RVEAHKTVRITGVVVEI-GSFRLLDTKDLDKDL-RLGFLELRSVAEVRGRIKVLGR-KRW 199

Query: 184 KVSVLKCTMTLNLTSHGVQNLAC 204
           KVSV+ CTM LNLT   +QNL C
Sbjct: 200 KVSVMSCTMRLNLTGRFIQNLLC 213

[Close]

BLAST of Lag0032676 vs. ExPASy TrEMBL
Match: A0A6J1I1W2 (late embryogenesis abundant protein At1g64065 OS=Cucurbita maxima OX=3661 GN=LOC111469093 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.6e-85
Identity = 170/203 (83.74%), Postives = 179/203 (88.18%), Query Frame = 0


Query: 1   MEADETSGDRPATLRSRRRASAKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           M A E   DRPATLRSRR+AS KCINTFCIYLFA AA ACIAAL LGLVVVRVKTPTVKL
Sbjct: 1   MAAGEPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVKNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSV VKNLHYGFSPTPFMDATLIAEI + NPNFG+F+YEE TN TLIYYGVAVGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVCLLKLFKEK 180
           VSVNAK  +    TVKVKPNSSFVDVDYFS DLA LKTMNMSCIAEF+GRV LLKLFKEK
Sbjct: 121 VSVNAKSNKNANFTVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNLAC 204
           KVS+LKCTM+LNL+SHGVQNLAC
Sbjct: 181 KVSMLKCTMSLNLSSHGVQNLAC 203

[Close]

BLAST of Lag0032676 vs. ExPASy TrEMBL
Match: A0A6J1EM85 (late embryogenesis abundant protein At1g64065 OS=Cucurbita moschata OX=3662 GN=LOC111435804 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.8e-84
Identity = 169/203 (83.25%), Postives = 178/203 (87.68%), Query Frame = 0


Query: 1   MEADETSGDRPATLRSRRRASAKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           M A E   DRPATLRSRR+AS KCINTFCIYLFA AA ACIAAL LGLVVVRVKTPTVKL
Sbjct: 1   MAAGEPPNDRPATLRSRRKASEKCINTFCIYLFAIAAVACIAALILGLVVVRVKTPTVKL 60

Query: 61  TSVAVKNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSV VKNLHYGFSPTPFMDATLIAEI + NPNFG+F+YEE TN TLIYYGVAVGIGEVK 
Sbjct: 61  TSVTVKNLHYGFSPTPFMDATLIAEITMENPNFGEFKYEEVTNTTLIYYGVAVGIGEVKT 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVCLLKLFKEK 180
           VSVNAK  ++    VKVKPNSSFVDVDYFS DLA LKTMNMSCIAEF+GRV LLKLFKEK
Sbjct: 121 VSVNAKSNKKANFKVKVKPNSSFVDVDYFSHDLAMLKTMNMSCIAEFKGRVRLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNLAC 204
           KVS+LKCTM+LNL SHGVQNLAC
Sbjct: 181 KVSMLKCTMSLNLNSHGVQNLAC 203

[Close]

BLAST of Lag0032676 vs. ExPASy TrEMBL
Match: A0A5A7TMT1 (Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002130 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 7.2e-78
Identity = 155/204 (75.98%), Postives = 173/204 (84.80%), Query Frame = 0


Query: 1   MEADETSGDRPATLRSRRRASAKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           M AD+  GDRP   RSRR++S KC+N FCI LFAAAATACIAALT GLVV+RVKTPTVKL
Sbjct: 1   MAADKIPGDRPTAHRSRRKSSKKCLNAFCICLFAAAATACIAALTFGLVVLRVKTPTVKL 60

Query: 61  TSVAVKNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSVAVKNLHYGFSPTPFM+ATL  EI + NPN+G F YE   NVTLIYYGV VGIGEVK 
Sbjct: 61  TSVAVKNLHYGFSPTPFMEATLTGEITMENPNYGAFEYEGVRNVTLIYYGVVVGIGEVKR 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVCLLKLFKEK 180
           +SVNAK +E+ K  VKVKPN  FV+VDYFSDDLARLKTMNMS  AEFEG++ LLKLFKEK
Sbjct: 121 LSVNAKSIEKRKFIVKVKPNWRFVNVDYFSDDLARLKTMNMSWNAEFEGKIYLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNLACL 205
           K+SV+KC+ +LNLTSHGVQNLACL
Sbjct: 181 KISVMKCSTSLNLTSHGVQNLACL 204

[Close]

BLAST of Lag0032676 vs. ExPASy TrEMBL
Match: A0A1S3AUE7 (late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC103482795 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 7.2e-78
Identity = 155/204 (75.98%), Postives = 173/204 (84.80%), Query Frame = 0


Query: 1   MEADETSGDRPATLRSRRRASAKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           M AD+  GDRP   RSRR++S KC+N FCI LFAAAATACIAALT GLVV+RVKTPTVKL
Sbjct: 1   MAADKIPGDRPTAHRSRRKSSKKCLNAFCICLFAAAATACIAALTFGLVVLRVKTPTVKL 60

Query: 61  TSVAVKNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           TSVAVKNLHYGFSPTPFM+ATL  EI + NPN+G F YE   NVTLIYYGV VGIGEVK 
Sbjct: 61  TSVAVKNLHYGFSPTPFMEATLTGEITMENPNYGAFEYEGVRNVTLIYYGVVVGIGEVKR 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVCLLKLFKEK 180
           +SVNAK +E+ K  VKVKPN  FV+VDYFSDDLARLKTMNMS  AEFEG++ LLKLFKEK
Sbjct: 121 LSVNAKSIEKRKFIVKVKPNWRFVNVDYFSDDLARLKTMNMSWNAEFEGKIYLLKLFKEK 180

Query: 181 KVSVLKCTMTLNLTSHGVQNLACL 205
           K+SV+KC+ +LNLTSHGVQNLACL
Sbjct: 181 KISVMKCSTSLNLTSHGVQNLACL 204

[Close]

BLAST of Lag0032676 vs. ExPASy TrEMBL
Match: A0A6J1CXS7 (late embryogenesis abundant protein At1g64065 OS=Momordica charantia OX=3673 GN=LOC111015254 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 4.0e-76
Identity = 152/203 (74.88%), Postives = 168/203 (82.76%), Query Frame = 0


Query: 1   MEADETSGDRPATLRSRRRASAKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKL 60
           M A ETSGDRPATLRSRRRAS +CIN  CIYLFA AA AC+A L LGL VVRVKTPT KL
Sbjct: 1   MAAQETSGDRPATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKL 60

Query: 61  TSVAVKNLHYGFSPTPFMDATLIAEIAIGNPNFGKFRYEEKTNVTLIYYGVAVGIGEVKG 120
           +SVAVKNL YGFSP PF+DATLIAE+ I NPNFG+F+YEE T+ + IYYGVA GIGEVK 
Sbjct: 61  SSVAVKNLSYGFSPNPFVDATLIAEVTIENPNFGEFKYEENTDASFIYYGVAAGIGEVKR 120

Query: 121 VSVNAKGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVCLLKLFKEK 180
           VSVNAKGV+ T  +V+VK N+S  DVDY S DLA LK MNMSCIAEFEGRV LLKLFKE 
Sbjct: 121 VSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKRMNMSCIAEFEGRVRLLKLFKEM 180

Query: 181 KVSVLKCTMTLNLTSHGVQNLAC 204
           KVS+LKCTMTLN +SH + NLAC
Sbjct: 181 KVSLLKCTMTLNFSSHAIHNLAC 203

[Close]

BLAST of Lag0032676 vs. TAIR 10
Match: AT1G64065.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 77.0 bits (188), Expect = 1.9e-14
Identity = 67/203 (33.00%), Postives = 104/203 (51.23%), Query Frame = 0


Query: 4   DETSGDRPATLRSRRRASAKCINTFCIYLFAAAATACIAALTLGLVVVRVKTPTVKLTSV 63
           +E SG R    R       KC+    +Y            L L  + +R+  P ++  S+
Sbjct: 20  EEQSGPR-IWRRKTEEPPGKCL----VYSLTIIVIIFALCLILSSIFLRISKPEIETRSI 79

Query: 64  AVKNLHYGFSPT-PFMDATLIAEIAIGNPNFGKFRYEEKT-NVTLIYYGVAVGIGEVKGV 123
           + ++L  G + T P+ +ATL+++I+I N NFG F +E+ T  V    +GV VG  +++G 
Sbjct: 80  STRDLRSGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSTLRVVYADHGV-VGETKIEGR 139

Query: 124 SVNA-KGVEETKLTVKVKPNSSFVDVDYFSDDLARLKTMNMSCIAEFEGRVCLLKLFKEK 183
            V A K V  T + V++  +   +D      DL RL  + +  +AE  GR+ +L   K  
Sbjct: 140 RVEAHKTVRITGVVVEI-GSFRLLDTKDLDKDL-RLGFLELRSVAEVRGRIKVLGR-KRW 199

Query: 184 KVSVLKCTMTLNLTSHGVQNLAC 204
           KVSV+ CTM LNLT   +QNL C
Sbjct: 200 KVSVMSCTMRLNLTGRFIQNLLC 213

The following BLAST results are available for this feature:

BLAST of Lag0032676 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022970100.1	7.4e-85	83.74	late embryogenesis abundant protein At1g64065 [Cucurbita maxima] >KAG6579536.1 L...	[more]
XP_023550526.1	1.3e-84	83.25	late embryogenesis abundant protein At1g64065 [Cucurbita pepo subsp. pepo]	[more]
XP_022929131.1	3.7e-84	83.25	late embryogenesis abundant protein At1g64065 [Cucurbita moschata]	[more]
XP_008437351.1	1.5e-77	75.98	PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo] >KAA0042...	[more]
XP_022145906.1	8.2e-76	74.88	late embryogenesis abundant protein At1g64065 [Momordica charantia]	[more]

BLAST of Lag0032676 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DST1	2.7e-13	33.00	Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Lag0032676 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I1W2	3.6e-85	83.74	late embryogenesis abundant protein At1g64065 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1EM85	1.8e-84	83.25	late embryogenesis abundant protein At1g64065 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5A7TMT1	7.2e-78	75.98	Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3AUE7	7.2e-78	75.98	late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6J1CXS7	4.0e-76	74.88	late embryogenesis abundant protein At1g64065 OS=Momordica charantia OX=3673 GN=...	[more]

BLAST of Lag0032676 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64065.1	1.9e-14	33.00	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.40.1820		coord: 38..186 e-value: 4.3E-5 score: 25.3
None	No IPR available	PANTHER	PTHR31852:SF157	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 21..203
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 21..203
None	No IPR available	SUPERFAMILY	117070	LEA14-like	coord: 43..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0032676.1	Lag0032676.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane