Lag0032658 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGTCGTTGCTCGTGAAGTCCCTTTCCGTGTTCTATTTTACGTTGCTTTTGTTTTGGCTATGCTTTTGCCTTCTTATGCTGCTGATCCTTTGTCTCCGGCGGCCCAATCTCCTGCTGCTAGCGATGGTAATTACTTTACTTCTTCCTTCCATTTACTCGAGAATATATATACCTTAACCAGTTGGTTACGTTAAGGTTGGCTAACAGGAGTTATTATTATTATGTAATTTGCAGGGACAAGCATAGACCAAGGGATTGCTTATGTGTTGATGTTGTTAGCGCTGGTGCTCACTTACATTATCCATTCAGCTGATCTTTCTATCAGTTTTTAA ATGGCGGTCGTTGCTCGTGAAGTCCCTTTCCGTGTTCTATTTTACGTTGCTTTTGTTTTGGCTATGCTTTTGCCTTCTTATGCTGCTGATCCTTTGTCTCCGGCGGCCCAATCTCCTGCTGCTAGCGATGGGACAAGCATAGACCAAGGGATTGCTTATGTGTTGATGTTGTTAGCGCTGGTGCTCACTTACATTATCCATTCAGCTGATCTTTCTATCAGTTTTTAA ATGGCGGTCGTTGCTCGTGAAGTCCCTTTCCGTGTTCTATTTTACGTTGCTTTTGTTTTGGCTATGCTTTTGCCTTCTTATGCTGCTGATCCTTTGTCTCCGGCGGCCCAATCTCCTGCTGCTAGCGATGGGACAAGCATAGACCAAGGGATTGCTTATGTGTTGATGTTGTTAGCGCTGGTGCTCACTTACATTATCCATTCAGCTGATCTTTCTATCAGTTTTTAA MAVVAREVPFRVLFYVAFVLAMLLPSYAADPLSPAAQSPAASDGTSIDQGIAYVLMLLALVLTYIIHSADLSISF Homology
BLAST of Lag0032658 vs. NCBI nr
Match: KAG7017004.1 (Arabinogalactan peptide 16 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 96.3 bits (238), Expect = 1.2e-16 Identity = 59/75 (78.67%), Postives = 64/75 (85.33%), Query Frame = 0
BLAST of Lag0032658 vs. NCBI nr
Match: KAG6579545.1 (Arabinogalactan protein 16, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 94.7 bits (234), Expect = 3.5e-16 Identity = 59/75 (78.67%), Postives = 63/75 (84.00%), Query Frame = 0
BLAST of Lag0032658 vs. NCBI nr
Match: XP_023532560.1 (arabinogalactan peptide 20-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 85.5 bits (210), Expect = 2.1e-13 Identity = 53/75 (70.67%), Postives = 59/75 (78.67%), Query Frame = 0
BLAST of Lag0032658 vs. NCBI nr
Match: XP_022996281.1 (arabinogalactan peptide 22-like [Cucurbita maxima]) HSP 1 Score: 84.7 bits (208), Expect = 3.6e-13 Identity = 53/75 (70.67%), Postives = 59/75 (78.67%), Query Frame = 0
BLAST of Lag0032658 vs. NCBI nr
Match: KAG7036000.1 (Arabinogalactan peptide 20 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 84.0 bits (206), Expect = 6.2e-13 Identity = 52/75 (69.33%), Postives = 58/75 (77.33%), Query Frame = 0
BLAST of Lag0032658 vs. ExPASy Swiss-Prot
Match: Q9M373 (Arabinogalactan protein 20 OS=Arabidopsis thaliana OX=3702 GN=AGP20 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.4e-07 Identity = 37/63 (58.73%), Postives = 45/63 (71.43%), Query Frame = 0
BLAST of Lag0032658 vs. ExPASy Swiss-Prot
Match: O82337 (Arabinogalactan protein 16 OS=Arabidopsis thaliana OX=3702 GN=AGP16 PE=1 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 3.1e-07 Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 0
BLAST of Lag0032658 vs. ExPASy Swiss-Prot
Match: Q8L9T8 (Arabinogalactan protein 41 OS=Arabidopsis thaliana OX=3702 GN=AGP41 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.0e-06 Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 0
BLAST of Lag0032658 vs. ExPASy Swiss-Prot
Match: Q9FK16 (Arabinogalactan protein 22 OS=Arabidopsis thaliana OX=3702 GN=AGP22 PE=1 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 3.8e-05 Identity = 32/60 (53.33%), Postives = 38/60 (63.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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