Lag0032645 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAACCGAAGCTAGGAAGATGGCGAAACACCCACAGAAACAGTCCAAGAGCAGGAATTCGAACTCGGAAGGTGTTCCCATTTTTCTGGTTTTGCTGCCATGGCTACTGGAAACTTTTGAATGGTAAAGAAAGTTATTATAGCTGCTTTTCCTTGTAATGTGTTTGTTGCAGAAGTTACCAGTTTGGAATGGGAGGTCATTCAAATCAGTGAGCAGGAGGAGGATCTCATTCATAGAATGCACAGGCTTGTTGGAGACAGGTTTTATCTCTCTCTCTCTCTATTTCTCTGAAAAGTTCGATATGACTCTCCGCCATCGTCGTCCTCGTTCTGAACGTGTTTTACTACTGTTACATTGAACTTCAGGTGGGATTTGATCGCGGGACGAATCCCGGGACGAACTGCAGTAGAAATAGAGAGGTTTTGGATATTGAAACATGCTTCCTGA ATGGAAACCGAAGCTAGGAAGATGGCGAAACACCCACAGAAACAGTCCAAGAGCAGGAATTCGAACTCGGAAGAAGTTACCAGTTTGGAATGGGAGGTCATTCAAATCAGTGAGCAGGAGGAGGATCTCATTCATAGAATGCACAGGCTTGTTGGAGACAGGTGGGATTTGATCGCGGGACGAATCCCGGGACGAACTGCAGTAGAAATAGAGAGGTTTTGGATATTGAAACATGCTTCCTGA ATGGAAACCGAAGCTAGGAAGATGGCGAAACACCCACAGAAACAGTCCAAGAGCAGGAATTCGAACTCGGAAGAAGTTACCAGTTTGGAATGGGAGGTCATTCAAATCAGTGAGCAGGAGGAGGATCTCATTCATAGAATGCACAGGCTTGTTGGAGACAGGTGGGATTTGATCGCGGGACGAATCCCGGGACGAACTGCAGTAGAAATAGAGAGGTTTTGGATATTGAAACATGCTTCCTGA METEARKMAKHPQKQSKSRNSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAVEIERFWILKHAS Homology
BLAST of Lag0032645 vs. NCBI nr
Match: XP_038874276.1 (transcription factor CPC-like [Benincasa hispida]) HSP 1 Score: 144.8 bits (364), Expect = 3.2e-31 Identity = 72/80 (90.00%), Postives = 74/80 (92.50%), Query Frame = 0
BLAST of Lag0032645 vs. NCBI nr
Match: XP_022146038.1 (transcription factor CPC-like isoform X2 [Momordica charantia]) HSP 1 Score: 142.1 bits (357), Expect = 2.0e-30 Identity = 71/80 (88.75%), Postives = 76/80 (95.00%), Query Frame = 0
BLAST of Lag0032645 vs. NCBI nr
Match: XP_038680402.1 (transcription factor CPC-like [Tripterygium wilfordii]) HSP 1 Score: 112.8 bits (281), Expect = 1.3e-21 Identity = 51/71 (71.83%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Lag0032645 vs. NCBI nr
Match: XP_038725413.1 (transcription factor CPC-like [Tripterygium wilfordii]) HSP 1 Score: 110.5 bits (275), Expect = 6.6e-21 Identity = 49/71 (69.01%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of Lag0032645 vs. NCBI nr
Match: TKR71125.1 (transcription factor TRY-like [Populus alba]) HSP 1 Score: 109.4 bits (272), Expect = 1.5e-20 Identity = 51/66 (77.27%), Postives = 59/66 (89.39%), Query Frame = 0
BLAST of Lag0032645 vs. ExPASy Swiss-Prot
Match: O22059 (Transcription factor CPC OS=Arabidopsis thaliana OX=3702 GN=CPC PE=1 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 6.2e-22 Identity = 48/75 (64.00%), Postives = 65/75 (86.67%), Query Frame = 0
BLAST of Lag0032645 vs. ExPASy Swiss-Prot
Match: Q9M157 (MYB-like transcription factor ETC3 OS=Arabidopsis thaliana OX=3702 GN=ETC3 PE=2 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 2.6e-20 Identity = 46/68 (67.65%), Postives = 60/68 (88.24%), Query Frame = 0
BLAST of Lag0032645 vs. ExPASy Swiss-Prot
Match: Q8GV05 (Transcription factor TRY OS=Arabidopsis thaliana OX=3702 GN=TRY PE=1 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.4e-18 Identity = 43/67 (64.18%), Postives = 56/67 (83.58%), Query Frame = 0
BLAST of Lag0032645 vs. ExPASy Swiss-Prot
Match: Q9LNI5 (MYB-like transcription factor ETC1 OS=Arabidopsis thaliana OX=3702 GN=ETC1 PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 3.2e-18 Identity = 44/73 (60.27%), Postives = 60/73 (82.19%), Query Frame = 0
BLAST of Lag0032645 vs. ExPASy Swiss-Prot
Match: Q84RD1 (MYB-like transcription factor ETC2 OS=Arabidopsis thaliana OX=3702 GN=ETC2 PE=1 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.0e-16 Identity = 42/68 (61.76%), Postives = 57/68 (83.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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