Lag0032553 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGAACAAAGGACCTCCGTCTTCGATCGCATCAAGCCTCCAGCTACTCGTCCTTCGGCATTCCAAAGAATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTTGATGTCCACCTCTACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAACTCGACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGGTCAATCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTGATGAAGTAAACAGCGATAAGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAGTCCTATAAGTCAAGGACCTGATCAAGACCATGATGAAGATAAGAGCTTTTAAAATGTAAAACTCCTTATCGTAAGAGTCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTGAGTGCAAAAACAATTTTGAACTACGTTATGACTTGGTCCCTTTTCTTCAAAGGGTACGTAGGCAGCTTAAAGAAAACTTTAAGTTCAGTCTCTGCAAAAAAAAAAAAAAAGTGCAACAAATATTGAAGCACGACGATATAAATTGAGGAAATTCATCACTAGTGGGGGCAACACAGCGAATGGAAGTTGTTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTGAAGGTTCGCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTTCGCTGCAGTTTCTTCTCCCTAACTTCGAAGGTTCTCACGCGCTTCGCTGCAATTCCTTCCTCCCTAAGTTTGAAGGTTCTCACGTTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTTCATGCGTTTGGTGCAGTTCCTTCTCTCCACGTTCAAAGGTTCTCACGCATTCGCTACAGTTCATTTCCTCCAAGTTCAAGGTTCTCATGCGCTTCGCTGCAGTTTCTTCTCCCTAAGTTCGAAGGTTCTCACGCGCTTCGATGCAGTTCCTTCCTCCCTAAGTTCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCCTTCCTCCAAATTTGAAGGTTTCGAAGGTTCTCACGCGCTGTGATTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCTGCGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTTATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTTCCTCCAAGTACGAAGGTTCCTCACGCGCTTCGATCGCTCCTTCTCCAAGTTCGAAGGCTCTTCGCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTACTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCTCTTCTCTCTACTGCTCATTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGTCCTCGTTCCGCTTCATCTTCAAATGTTGGTAGTTGACGGCGTCCGCTGCGCTTCATCTTCAAATGTTGGCAGTTGA ATGGGTGAACAAAGGACCTCCGTCTTCGATCGCATCAAGCCTCCAGCTACTCGTCCTTCGGCATTCCAAAGAATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTTGATGTCCACCTCTACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAACTCGACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGGTCAATCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTGATGAACGAATGGAAGTTGTTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTGAAGGTTCGCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTTCGCTGCAGTTTCTTCTCCCTAACTTCGAAGGTTCTCACGCGCTTCGCTGCAATTCCTTCCTCCCTAAGTTTGAAGGTTCTCACGTTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTTCATGCGTTTGGTGCAGTTCCTTCTCTCCACGTTCAAAGGTTCTCACGCATTCGCTACAGTTCATTTCCTCCAAGTTCAAGGTTCTCATGCGCTTCGCTGCAGTTTCTTCTCCCTAAGTTCGAAGGTTCTCACGCGCTTCGATGCAGTTCCTTCCTCCCTAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCTGCGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTTATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTTCCTCCAAGTACGAAGGTTCCTCACGCGCTTCGATCGCTCCTTCTCCAAGTTCGAAGGCTCTTCGCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTACTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCTCTTCTCTCTACTGCTCATTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGTCCTCGTTCCGCTTCATCTTCAAATGTTGGTAGTTGACGGCGTCCGCTGCGCTTCATCTTCAAATGTTGGCAGTTGA ATGGGTGAACAAAGGACCTCCGTCTTCGATCGCATCAAGCCTCCAGCTACTCGTCCTTCGGCATTCCAAAGAATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTTGATGTCCACCTCTACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAACTCGACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGGTCAATCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTGATGAACGAATGGAAGTTGTTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCACAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTGAAGGTTCGCACATCGCTTCGCTTCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTTCGCTGCAGTTTCTTCTCCCTAACTTCGAAGGTTCTCACGCGCTTCGCTGCAATTCCTTCCTCCCTAAGTTTGAAGGTTCTCACGTTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTTCATGCGTTTGGTGCAGTTCCTTCTCTCCACGTTCAAAGGTTCTCACGCATTCGCTACAGTTCATTTCCTCCAAGTTCAAGGTTCTCATGCGCTTCGCTGCAGTTTCTTCTCCCTAAGTTCGAAGGTTCTCACGCGCTTCGATGCAGTTCCTTCCTCCCTAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCTGCGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTTATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTTCCTCCAAGTACGAAGGTTCCTCACGCGCTTCGATCGCTCCTTCTCCAAGTTCGAAGGCTCTTCGCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTACTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCTCTTCTCTCTACTGCTCATTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTCTTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGTCCTCGTTCCGCTTCATCTTCAAATGTTGGTAGTTGACGGCGTCCGCTGCGCTTCATCTTCAAATGTTGGCAGTTGA MGEQRTSVFDRIKPPATRPSAFQRMSMAATEEENQCLMSTSTRPSAFQRLSVSTSKKTRPSTSVFDRLKVTSGQSKRKMDNLEVKLLMNEWKLFPPSSKVLTRFAAVPSSQFEGSHALRCSSFPQVRRFSRRFAAVPSSKLKVRTSLRFALRFVAVPSSKFEGSHTLRCSFFSLTSKVLTRFAAIPSSLSLKVLTLLRCSSFLQVRRFHAFGAVPSLHVQRFSRIRYSSFPPSSRFSCASLQFLLPKFEGSHALRCSSFLPKFEVPSSKFEGSHALRCAVPSSKFEGSYALRCYLPPSSKVLSRAAAVPSSKYEGSSRASIAPSPSSKALRSTAPSPSSKALLSVATSPSSKALLSTAPSPSSKALLSTAHSPSSKVLLSTPLFEGSPLRFSFSKFEGSPLLLFKCLAAVDVLVPLHLQMLVVDGVRCASSSNVGS Homology
BLAST of Lag0032553 vs. NCBI nr
Match: KAA0050736.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYJ95700.1 retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 105.5 bits (262), Expect = 1.2e-18 Identity = 57/83 (68.67%), Postives = 67/83 (80.72%), Query Frame = 0
BLAST of Lag0032553 vs. NCBI nr
Match: KAA0025725.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 105.1 bits (261), Expect = 1.5e-18 Identity = 57/83 (68.67%), Postives = 67/83 (80.72%), Query Frame = 0
BLAST of Lag0032553 vs. NCBI nr
Match: KAA0062746.1 (Retrotransposon gag protein [Cucumis melo var. makuwa] >TYK22545.1 Retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 104.8 bits (260), Expect = 2.0e-18 Identity = 54/88 (61.36%), Postives = 69/88 (78.41%), Query Frame = 0
BLAST of Lag0032553 vs. NCBI nr
Match: KAA0062063.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 104.8 bits (260), Expect = 2.0e-18 Identity = 56/88 (63.64%), Postives = 66/88 (75.00%), Query Frame = 0
BLAST of Lag0032553 vs. NCBI nr
Match: KAA0047862.1 (Retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 104.0 bits (258), Expect = 3.4e-18 Identity = 55/88 (62.50%), Postives = 68/88 (77.27%), Query Frame = 0
BLAST of Lag0032553 vs. ExPASy TrEMBL
Match: A0A5A7U974 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00280 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 5.6e-19 Identity = 57/83 (68.67%), Postives = 67/83 (80.72%), Query Frame = 0
BLAST of Lag0032553 vs. ExPASy TrEMBL
Match: A0A5A7SMQ5 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold653G00040 PE=4 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 7.3e-19 Identity = 57/83 (68.67%), Postives = 67/83 (80.72%), Query Frame = 0
BLAST of Lag0032553 vs. ExPASy TrEMBL
Match: A0A5A7V8H3 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold523G00270 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 9.6e-19 Identity = 54/88 (61.36%), Postives = 69/88 (78.41%), Query Frame = 0
BLAST of Lag0032553 vs. ExPASy TrEMBL
Match: A0A5A7V1P3 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004060 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 9.6e-19 Identity = 56/88 (63.64%), Postives = 66/88 (75.00%), Query Frame = 0
BLAST of Lag0032553 vs. ExPASy TrEMBL
Match: A0A5A7TWI6 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001280 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.6e-18 Identity = 55/88 (62.50%), Postives = 68/88 (77.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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