Lag0032518 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCAACATCGAGCACTTCATCAGTTGGAAATGACCGGGTACCGGCTTTGCCTTCTTCCTCCACCATCACTCTCCAGTCACAACACCTGTTACAACCCAGTGACTCAATCCTCATACATCTACACCTCTCTCGACTACTCAAACCAGACCCCTAAATCCCAATATTCCTCCATTTTAATCGACATTCGCCCAAAACCCCTCTATACCAGCCAAATTCCAATATCTGTCGACGTCCCCTTCATCTCTACCTTTCTTCCCCGCCTTGAACCTTGCTCCCTCCTTTTTCCCTCCGACTCAGCCGTTAACGACACCCTATCCGACTCTCACTCCTCCGCTCAACATCAAGCTCTCAGATTCTAATTATCTCTTATGGAAAAACCAACTGCTCAACCATATTATTGCTTTTGACATGGAGAGTTTCATCAATGGGACGCCAGCTCCACCGAAATTTCTGGATGTAGCTCAAACCCAGGTAAATCCCTAATTTCTAATTTGGCAAAAGTATAATCGTACTTTGATGAGCTGGATATATTCTTCTTTGAACGAGGATAAATTAGGAGAGATTATTGGTTGTTCCTCTAAATATGAAATCTGGGAGCACCTTCGTTTTGTGTATGAGTCGTCTTCCACTGTTAGAATCATGGGTCTTCGGTCACAGCTTCAAAAAATTAGGAAATATCGTCAGTCGGTTTCCCAGTATCTTGCCTAGATTAAGGATGTCGCTAACAAATTTTCTACAATTGGTGAGCCCTTGTCTTACCGTGATCACTTAGGTTACATTTTAGAGGGACTAGGAATTGAATATAATCCTTTTGTTACTTCGATTCAAAATAGGAATGATCAACCTTCTCTAGCTGATGTTCGTAGCCTTCTTCTTGCTTACGAAACCCGTCTTGAAAAACAATCCTCTGTCGACAACCTTAACTTAGTTCAGGAAAATCAAGCCCATCTTTCTGTGAACAAAATACCTCCAAGCGTTTCCAGAAACCTTAGCATAACTCAAAGCCTAATAACCAACTGA ATGGCATCAACATCGAGCACTTCATCAGTTGGAAATGACCGGGTACCGGCTTTGCCTTCTTCCTCCACCATCACTCTCCAGTCACAACACCTGTTACAACCCACCAAATTCCAATATCTGTCGACGTCCCCTTCATCTCTACCTTTCTTCCCCGCCTTGAACCTTGCTCCCTCCTTTTTCCCTCCGACTCAGCCGTTAACGACACCCTATCCGACTCTCACTCCTCCGCTCAACATCAAGCTCTCAGATTCTAATTATCTCTTATGGAAAAACCAACTGCTCAACCATATTATTGCTTTTGACATGGAGAGTTTCATCAATGGGACGCCAGCTCCACCGAAATTTCTGGATGTAGCTCAAACCCAGATTAAGGATGTCGCTAACAAATTTTCTACAATTGGTGAGCCCTTGTCTTACCGTGATCACTTAGGTTACATTTTAGAGGGACTAGGAATTGAATATAATCCTTTTGTTACTTCGATTCAAAATAGGAATGATCAACCTTCTCTAGCTGATGTTCGTAGCCTTCTTCTTGCTTACGAAACCCGTCTTGAAAAACAATCCTCTGTCGACAACCTTAACTTAGTTCAGGAAAATCAAGCCCATCTTTCTGTGAACAAAATACCTCCAAGCGTTTCCAGAAACCTTAGCATAACTCAAAGCCTAATAACCAACTGA ATGGCATCAACATCGAGCACTTCATCAGTTGGAAATGACCGGGTACCGGCTTTGCCTTCTTCCTCCACCATCACTCTCCAGTCACAACACCTGTTACAACCCACCAAATTCCAATATCTGTCGACGTCCCCTTCATCTCTACCTTTCTTCCCCGCCTTGAACCTTGCTCCCTCCTTTTTCCCTCCGACTCAGCCGTTAACGACACCCTATCCGACTCTCACTCCTCCGCTCAACATCAAGCTCTCAGATTCTAATTATCTCTTATGGAAAAACCAACTGCTCAACCATATTATTGCTTTTGACATGGAGAGTTTCATCAATGGGACGCCAGCTCCACCGAAATTTCTGGATGTAGCTCAAACCCAGATTAAGGATGTCGCTAACAAATTTTCTACAATTGGTGAGCCCTTGTCTTACCGTGATCACTTAGGTTACATTTTAGAGGGACTAGGAATTGAATATAATCCTTTTGTTACTTCGATTCAAAATAGGAATGATCAACCTTCTCTAGCTGATGTTCGTAGCCTTCTTCTTGCTTACGAAACCCGTCTTGAAAAACAATCCTCTGTCGACAACCTTAACTTAGTTCAGGAAAATCAAGCCCATCTTTCTGTGAACAAAATACCTCCAAGCGTTTCCAGAAACCTTAGCATAACTCAAAGCCTAATAACCAACTGA MASTSSTSSVGNDRVPALPSSSTITLQSQHLLQPTKFQYLSTSPSSLPFFPALNLAPSFFPPTQPLTTPYPTLTPPLNIKLSDSNYLLWKNQLLNHIIAFDMESFINGTPAPPKFLDVAQTQIKDVANKFSTIGEPLSYRDHLGYILEGLGIEYNPFVTSIQNRNDQPSLADVRSLLLAYETRLEKQSSVDNLNLVQENQAHLSVNKIPPSVSRNLSITQSLITN Homology
BLAST of Lag0032518 vs. NCBI nr
Match: XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia]) HSP 1 Score: 147.9 bits (372), Expect = 1.0e-31 Identity = 93/239 (38.91%), Postives = 120/239 (50.21%), Query Frame = 0
BLAST of Lag0032518 vs. NCBI nr
Match: XP_038887133.1 (uncharacterized protein LOC120077323 [Benincasa hispida]) HSP 1 Score: 126.7 bits (317), Expect = 2.5e-25 Identity = 58/85 (68.24%), Postives = 73/85 (85.88%), Query Frame = 0
BLAST of Lag0032518 vs. NCBI nr
Match: XP_022148871.1 (uncharacterized protein LOC111017438 [Momordica charantia]) HSP 1 Score: 118.2 bits (295), Expect = 8.9e-23 Identity = 58/94 (61.70%), Postives = 76/94 (80.85%), Query Frame = 0
BLAST of Lag0032518 vs. NCBI nr
Match: PON47862.1 (hypothetical protein TorRG33x02_321990 [Trema orientale]) HSP 1 Score: 106.7 bits (265), Expect = 2.7e-19 Identity = 74/229 (32.31%), Postives = 99/229 (43.23%), Query Frame = 0
BLAST of Lag0032518 vs. NCBI nr
Match: XP_038891713.1 (uncharacterized protein LOC120081111 [Benincasa hispida]) HSP 1 Score: 105.9 bits (263), Expect = 4.6e-19 Identity = 52/84 (61.90%), Postives = 67/84 (79.76%), Query Frame = 0
BLAST of Lag0032518 vs. ExPASy TrEMBL
Match: A0A6J1DQX7 (uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022315 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 5.1e-32 Identity = 93/239 (38.91%), Postives = 120/239 (50.21%), Query Frame = 0
BLAST of Lag0032518 vs. ExPASy TrEMBL
Match: A0A6J1D6N7 (uncharacterized protein LOC111017438 OS=Momordica charantia OX=3673 GN=LOC111017438 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 4.3e-23 Identity = 58/94 (61.70%), Postives = 76/94 (80.85%), Query Frame = 0
BLAST of Lag0032518 vs. ExPASy TrEMBL
Match: A0A2P5BGF8 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_321990 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.3e-19 Identity = 74/229 (32.31%), Postives = 99/229 (43.23%), Query Frame = 0
BLAST of Lag0032518 vs. ExPASy TrEMBL
Match: A0A438FTV3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_055887 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 2.9e-19 Identity = 67/180 (37.22%), Postives = 93/180 (51.67%), Query Frame = 0
BLAST of Lag0032518 vs. ExPASy TrEMBL
Match: A0A438GC62 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_210 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.2e-17 Identity = 78/230 (33.91%), Postives = 99/230 (43.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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