Lag0032469 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0032469
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionHEAT repeat-containing protein 6 isoform X1
Locationchr11: 32987960 .. 32989815 (-)
RNA-Seq ExpressionLag0032469
SyntenyLag0032469
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACACTTCTTTTGCCAACTCGGGATGTGCTGCTGCCAAGGTAGTTCCTTCAGTTAAATATCGATGCTCAAGTTTATTATTCTATCTTCTCTGTCAATCCCTTGCTATCTACTTATATTTCATACTTATTTCTTCAGTGTCCTTAATTATTTTCTTGTAGGAAATTTGACGCAACTTTAATGACATGTCTGCTTTTTGATCCTTCTCTGAAGGTATATATTCTGTTTCATGTAATTGATTAATCAACTCAGCTTATTCAATATTTTGACTGAAAATAGGCTGAAAGTGTTGATCCTTCTCAATTTTTTTGTTTCTACCTTTTGTTATTTTATTTGTTAAGTGCTAGGTTCTTCTATCTATATTACATACTGCTTTGGCTTGCCCAGGCTCAGATTGCATCTGCTGCAGCCCTGGTGGTCATGTTGGATAGGACTACGTCCATTTCCTTGCAGATTGCAGAATACAAAGATCCAACTAAATGTGGATCCTTTATGCCTCTTTCGATTTCCCTTGGGCAGATATTGATGCAACTTCATACAGGTACCAAATTTTTTTTTTTTTGGACAAGAAACAAGCACTTTCCATTATGAGATTGAAAAGCACAAGGAACTCAGGAGCTACATAAATGCTCTCCAGTTGCTCTGCATATTGGAAACAGAGTAATTACAAAAGTTTAAACTTTTTGGCCCATAAAGACAAAAAATAAATAATGCTATCCGGAAGCTGGTCAATGGGCCTTTAGGTGTTGGAGAAGATGTGATTGTTCCTTTCCTTCCAAAGTAGTATCGATACAATTATGTATTTTGGGTGACTAGAACAAAAAAAAAAAAAAAATCGTGGTTGGGAAGGTTACAGTAGCAAAAGCCATTGAAATTACTTAGAAGTTAGAAATAGGCTGGAGAGGCTCAGACAGACAAGTTTTTTACAAGAGAATGGAATTTTGAAAAAAAATGGCACATAGCCGGTCAATTTCCTTACTTTATAGGGGCTGCAAAGACTGATAGGTAATAGGTTGGGAGGTTTTGTCAGGCCCCCCATTGTGAATACATATGTTAGAAGGGGTAGAAGTGGGAATTCACCCTCCCCGTATTTGGTTTATGAGTCGGTTTGTTTAAAGTCGGTTTAATGGCGGTTTAGCTAGGTGGGGCTATATATTGTTGTATTTTGGGCGGTTCTAGGGTATGTCTTTTGTACTAAACTTAAACTTTTCTGGTTTAAGGAGTCTTGGAGATCGCCACCTTCTTGAAGTGGTGGTTTTGTAATACCCTTTTTGTGTTAATAGAAATTCCTGTTCAAGTATCTTAACAAATTAGTATCAGAGCACGTCATCTTGGGAAAGACACGAGGAATGATGCAAAAACAACTCGAGGAGCGAATGACCAAATCGAAAAGGAGTATGGAGGAGGTAGTCAATGAAAAATTTGCCCGAGTTGGAAAAGTCCGTAGTCGAGTTGAACAAAAGTATGGAGAAATTGTTGCATGGAAGATCAAAGGCAAGTATCTATGGAAAATCAAAAGGCGTTAGCGAATTTACTTATTGACGGTTCTTGCAGTGGAGTAGATGAAAACAAGGAATCAAGGCAGAAACGAAAAGCCCCTGAGAGTGCAAGTGTTACTTCCCGTCGGAAGGAGCCGAAGGGGGAAGATCACTTGCATGATCAACATATAAATTCAAAAAGGTCGAAATGCCAAATTTCGAAGGGGATCAACTCGATGATTGGCTCTTTAGAGTCGAATGCTACTTCGACATTCATCAACTCTCAGACTTGGAAAATATCACAGGGACCGGAGTCGCTCTCCGGTGGTATCACAGGGCCGAATGACGCAATCCATTCACTGATTGGAAAGATTTGA

mRNA sequence

ATGGACACTTCTTTTGCCAACTCGGGATGTGCTGCTGCCAAGGCTCAGATTGCATCTGCTGCAGCCCTGGTGGTCATGTTGGATAGGACTACGTCCATTTCCTTGCAGATTGCAGAATACAAAGATCCAACTAAATGTGGATCCTTTATGCCTCTTTCGATTTCCCTTGGGCAGATATTGATGCAACTTCATACAGAGCACGTCATCTTGGGAAAGACACGAGGAATGATGCAAAAACAACTCGAGGAGCGAATGACCAAATCGAAAAGGAGTATGGAGGAGGTAGTCAATGAAAAATTTGCCCGAGTTGGAAAAGTCCGTAGTCGAGTTGAACAAAATGGAGTAGATGAAAACAAGGAATCAAGGCAGAAACGAAAAGCCCCTGAGAGTGCAAGTGTTACTTCCCGTCGGAAGGAGCCGAAGGGGGAAGATCACTTGCATGATCAACATATAAATTCAAAAAGGTCGAAATGCCAAATTTCGAAGGGGATCAACTCGATGATTGGCTCTTTAGAGTCGAATGCTACTTCGACATTCATCAACTCTCAGACTTGGAAAATATCACAGGGACCGGAGTCGCTCTCCGGTGGTATCACAGGGCCGAATGACGCAATCCATTCACTGATTGGAAAGATTTGA

Coding sequence (CDS)

ATGGACACTTCTTTTGCCAACTCGGGATGTGCTGCTGCCAAGGCTCAGATTGCATCTGCTGCAGCCCTGGTGGTCATGTTGGATAGGACTACGTCCATTTCCTTGCAGATTGCAGAATACAAAGATCCAACTAAATGTGGATCCTTTATGCCTCTTTCGATTTCCCTTGGGCAGATATTGATGCAACTTCATACAGAGCACGTCATCTTGGGAAAGACACGAGGAATGATGCAAAAACAACTCGAGGAGCGAATGACCAAATCGAAAAGGAGTATGGAGGAGGTAGTCAATGAAAAATTTGCCCGAGTTGGAAAAGTCCGTAGTCGAGTTGAACAAAATGGAGTAGATGAAAACAAGGAATCAAGGCAGAAACGAAAAGCCCCTGAGAGTGCAAGTGTTACTTCCCGTCGGAAGGAGCCGAAGGGGGAAGATCACTTGCATGATCAACATATAAATTCAAAAAGGTCGAAATGCCAAATTTCGAAGGGGATCAACTCGATGATTGGCTCTTTAGAGTCGAATGCTACTTCGACATTCATCAACTCTCAGACTTGGAAAATATCACAGGGACCGGAGTCGCTCTCCGGTGGTATCACAGGGCCGAATGACGCAATCCATTCACTGATTGGAAAGATTTGA

Protein sequence

MDTSFANSGCAAAKAQIASAAALVVMLDRTTSISLQIAEYKDPTKCGSFMPLSISLGQILMQLHTEHVILGKTRGMMQKQLEERMTKSKRSMEEVVNEKFARVGKVRSRVEQNGVDENKESRQKRKAPESASVTSRRKEPKGEDHLHDQHINSKRSKCQISKGINSMIGSLESNATSTFINSQTWKISQGPESLSGGITGPNDAIHSLIGKI
Homology
[Close]
BLAST of Lag0032469 vs. NCBI nr
Match: XP_022957979.1 (HEAT repeat-containing protein 6 isoform X1 [Cucurbita moschata])

HSP 1 Score: 99.0 bits (245), Expect = 5.3e-17
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 14  KAQIASAAALVVMLDRTTSISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT 66
           KAQIASAAALVVMLDRTT+ISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT
Sbjct: 444 KAQIASAAALVVMLDRTTTISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT 495

[Close]
BLAST of Lag0032469 vs. NCBI nr
Match: XP_022957982.1 (uncharacterized protein LOC111459349 isoform X4 [Cucurbita moschata])

HSP 1 Score: 99.0 bits (245), Expect = 5.3e-17
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 14  KAQIASAAALVVMLDRTTSISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT 66
           KAQIASAAALVVMLDRTT+ISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT
Sbjct: 444 KAQIASAAALVVMLDRTTTISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT 495

[Close]
BLAST of Lag0032469 vs. NCBI nr
Match: XP_022957981.1 (HEAT repeat-containing protein 6 isoform X3 [Cucurbita moschata])

HSP 1 Score: 99.0 bits (245), Expect = 5.3e-17
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 14  KAQIASAAALVVMLDRTTSISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT 66
           KAQIASAAALVVMLDRTT+ISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT
Sbjct: 444 KAQIASAAALVVMLDRTTTISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT 495

[Close]
BLAST of Lag0032469 vs. NCBI nr
Match: XP_022957980.1 (HEAT repeat-containing protein 6 isoform X2 [Cucurbita moschata])

HSP 1 Score: 99.0 bits (245), Expect = 5.3e-17
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 14  KAQIASAAALVVMLDRTTSISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT 66
           KAQIASAAALVVMLDRTT+ISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT
Sbjct: 444 KAQIASAAALVVMLDRTTTISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT 495

[Close]
BLAST of Lag0032469 vs. NCBI nr
Match: XP_022996272.1 (uncharacterized protein LOC111491546 isoform X4 [Cucurbita maxima])

HSP 1 Score: 96.7 bits (239), Expect = 2.6e-16
Identity = 50/52 (96.15%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 14  KAQIASAAALVVMLDRTTSISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT 66
           KAQIASAAALVVMLDRTT+ISLQIAEYKDPTKCGSF PLSISLGQILMQLHT
Sbjct: 444 KAQIASAAALVVMLDRTTTISLQIAEYKDPTKCGSFTPLSISLGQILMQLHT 495

[Close]
BLAST of Lag0032469 vs. ExPASy TrEMBL
Match: A0A6J1H262 (HEAT repeat-containing protein 6 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459349 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.5e-17
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 14  KAQIASAAALVVMLDRTTSISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT 66
           KAQIASAAALVVMLDRTT+ISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT
Sbjct: 444 KAQIASAAALVVMLDRTTTISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT 495

[Close]
BLAST of Lag0032469 vs. ExPASy TrEMBL
Match: A0A6J1H3P0 (HEAT repeat-containing protein 6 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459349 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.5e-17
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 14  KAQIASAAALVVMLDRTTSISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT 66
           KAQIASAAALVVMLDRTT+ISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT
Sbjct: 444 KAQIASAAALVVMLDRTTTISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT 495

[Close]
BLAST of Lag0032469 vs. ExPASy TrEMBL
Match: A0A6J1H0R1 (HEAT repeat-containing protein 6 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111459349 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.5e-17
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 14  KAQIASAAALVVMLDRTTSISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT 66
           KAQIASAAALVVMLDRTT+ISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT
Sbjct: 444 KAQIASAAALVVMLDRTTTISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT 495

[Close]
BLAST of Lag0032469 vs. ExPASy TrEMBL
Match: A0A6J1H0N6 (uncharacterized protein LOC111459349 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111459349 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.5e-17
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 14  KAQIASAAALVVMLDRTTSISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT 66
           KAQIASAAALVVMLDRTT+ISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT
Sbjct: 444 KAQIASAAALVVMLDRTTTISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT 495

[Close]
BLAST of Lag0032469 vs. ExPASy TrEMBL
Match: A0A6J1K894 (HEAT repeat-containing protein 6 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491546 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.3e-16
Identity = 50/52 (96.15%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 14  KAQIASAAALVVMLDRTTSISLQIAEYKDPTKCGSFMPLSISLGQILMQLHT 66
           KAQIASAAALVVMLDRTT+ISLQIAEYKDPTKCGSF PLSISLGQILMQLHT
Sbjct: 444 KAQIASAAALVVMLDRTTTISLQIAEYKDPTKCGSFTPLSISLGQILMQLHT 495

[Close]
BLAST of Lag0032469 vs. TAIR 10
Match: AT4G38120.1 (ARM repeat superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 5.4e-12
Identity = 41/70 (58.57%), Postives = 49/70 (70.00%), Query Frame = 0 

Query: 14  KAQIASAAALVVMLDRTTSISLQIAEYKDPTKCGSFMPLSISLGQILMQLHTE--HVILG 73
           K +IASA+AL  M+D  +SI LQ+AEYK+ TK GSFMPLS SLG ILMQLHT   H+I  
Sbjct: 443 KVRIASASALATMMDGPSSIFLQVAEYKESTKYGSFMPLSNSLGLILMQLHTGILHLIHS 502

Query: 74  KTRGMMQKQL 82
              G +  QL
Sbjct: 503 DNHGRLLIQL 512

The following BLAST results are available for this feature:
BLAST of Lag0032469 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022957979.15.3e-1798.08HEAT repeat-containing protein 6 isoform X1 [Cucurbita moschata][more]
XP_022957982.15.3e-1798.08uncharacterized protein LOC111459349 isoform X4 [Cucurbita moschata][more]
XP_022957981.15.3e-1798.08HEAT repeat-containing protein 6 isoform X3 [Cucurbita moschata][more]
XP_022957980.15.3e-1798.08HEAT repeat-containing protein 6 isoform X2 [Cucurbita moschata][more]
XP_022996272.12.6e-1696.15uncharacterized protein LOC111491546 isoform X4 [Cucurbita maxima][more]
BLAST of Lag0032469 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0032469 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H2622.5e-1798.08HEAT repeat-containing protein 6 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1H3P02.5e-1798.08HEAT repeat-containing protein 6 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1H0R12.5e-1798.08HEAT repeat-containing protein 6 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1H0N62.5e-1798.08uncharacterized protein LOC111459349 isoform X4 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1K8941.3e-1696.15HEAT repeat-containing protein 6 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
BLAST of Lag0032469 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G38120.15.4e-1258.57ARM repeat superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 78..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..155
IPR025283Domain of unknown function DUF4042PFAMPF13251DUF4042coord: 13..66
e-value: 4.4E-7
score: 29.8

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0032469.1Lag0032469.1mRNA