Lag0032243 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAAACGAGAGCAAGAAAAGAGAGAGATAATGAGGAAGAAGAGGTACTTGTTACCCCTGAGGCACAGAAAGTGAAAATGAAGAAGAAGAAGACATCGGAGGAGAAAGAAGCTAAAAGAAGGAAAAGGCAACAACGAAAATAATAACTGAGTCGAGAGTTGTACAGAAGGTTGTGGAAGATGTTGTTGCCACAGTAGTTGAAGAAGACCCGAAGGAACCAGAAGAACAAAATCCAGAGCAGTTAAGTGATGCTGTGAGGGAAGTTGGTGTTGAGGGGGCACAGTGGAGGCTTTCAAAAACTCTGAAGAGGACGTTTCAGTCAGCCTATTTGAAGAAGGAAGCAAATACATGGATGGGGTTTATCAAACAAAGGTTGCTTCCAATGACTCATGACTCGAAGGTTTCAAGGGAACGAGTTCTTCTAGCTTTCGTGATTTTGAGGTCTCTCAGCATTGATGTAGGAAAGATTATTGCTAGTGAAATATCTGGTTGCTGGAAAAAGAAAGTGGGGAAATTGTTTTTCCCGAATACGATCACAATGCTTTGCAAGCGAGCAGGGGTTCTGGAGAATGAAGGAGATGTCACACTATTTGACAAGGGAATCATTGATACGCCTAACTTGGCGTAG ATGGCGAAAACGAGAGCAAGAAAAGAGAGAGATAATGAGGAAGAAGAGAAGGTTGTGGAAGATGTTGTTGCCACAGTAGTTGAAGAAGACCCGAAGGAACCAGAAGAACAAAATCCAGAGCAGTTAAGTGATGCTGTGAGGGAAGTTGGTGTTGAGGGGGCACAGTGGAGGCTTTCAAAAACTCTGAAGAGGACGTTTCAGTCAGCCTATTTGAAGAAGGAAGCAAATACATGGATGGGGTTTATCAAACAAAGGTTGCTTCCAATGACTCATGACTCGAAGGTTTCAAGGGAACGAGTTCTTCTAGCTTTCGTGATTTTGAGGTCTCTCAGCATTGATGTAGGAAAGATTATTGCTAGTGAAATATCTGGTTGCTGGAAAAAGAAAGTGGGGAAATTGTTTTTCCCGAATACGATCACAATGCTTTGCAAGCGAGCAGGGGTTCTGGAGAATGAAGGAGATGTCACACTATTTGACAAGGGAATCATTGATACGCCTAACTTGGCGTAG ATGGCGAAAACGAGAGCAAGAAAAGAGAGAGATAATGAGGAAGAAGAGAAGGTTGTGGAAGATGTTGTTGCCACAGTAGTTGAAGAAGACCCGAAGGAACCAGAAGAACAAAATCCAGAGCAGTTAAGTGATGCTGTGAGGGAAGTTGGTGTTGAGGGGGCACAGTGGAGGCTTTCAAAAACTCTGAAGAGGACGTTTCAGTCAGCCTATTTGAAGAAGGAAGCAAATACATGGATGGGGTTTATCAAACAAAGGTTGCTTCCAATGACTCATGACTCGAAGGTTTCAAGGGAACGAGTTCTTCTAGCTTTCGTGATTTTGAGGTCTCTCAGCATTGATGTAGGAAAGATTATTGCTAGTGAAATATCTGGTTGCTGGAAAAAGAAAGTGGGGAAATTGTTTTTCCCGAATACGATCACAATGCTTTGCAAGCGAGCAGGGGTTCTGGAGAATGAAGGAGATGTCACACTATTTGACAAGGGAATCATTGATACGCCTAACTTGGCGTAG MAKTRARKERDNEEEEKVVEDVVATVVEEDPKEPEEQNPEQLSDAVREVGVEGAQWRLSKTLKRTFQSAYLKKEANTWMGFIKQRLLPMTHDSKVSRERVLLAFVILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVTLFDKGIIDTPNLA Homology
BLAST of Lag0032243 vs. NCBI nr
Match: XP_024971944.1 (uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]) HSP 1 Score: 91.3 bits (225), Expect = 8.8e-15 Identity = 45/118 (38.14%), Postives = 73/118 (61.86%), Query Frame = 0
BLAST of Lag0032243 vs. NCBI nr
Match: XP_024995361.1 (formin-like protein 3 [Cynara cardunculus var. scolymus]) HSP 1 Score: 88.2 bits (217), Expect = 7.4e-14 Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 0
BLAST of Lag0032243 vs. NCBI nr
Match: TYH88163.1 (hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]) HSP 1 Score: 86.3 bits (212), Expect = 2.8e-13 Identity = 50/124 (40.32%), Postives = 69/124 (55.65%), Query Frame = 0
BLAST of Lag0032243 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii]) HSP 1 Score: 84.7 bits (208), Expect = 8.2e-13 Identity = 50/126 (39.68%), Postives = 68/126 (53.97%), Query Frame = 0
BLAST of Lag0032243 vs. NCBI nr
Match: TYI22425.1 (hypothetical protein ES332_A06G102500v1 [Gossypium tomentosum]) HSP 1 Score: 84.7 bits (208), Expect = 8.2e-13 Identity = 50/131 (38.17%), Postives = 71/131 (54.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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