Lag0032116 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0032116
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr11: 25102446 .. 25110376 (-)
RNA-Seq Expression	Lag0032116
Synteny	Lag0032116

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCATGGAGCGACTGAAAGAGAACAATAGTGACCGGAGTAAACTTAAGAAGGTTGAGATGCCTGTGTTCGGTGGAGATGAACCAAATTCTTGGTTGTTTCATGTCGATAGGTTTTTCAAATCCATAAACTAACCGGTTTCGAGAAGTTAATTGTGGCTGTAGTGATTTTTGAAGGAGTAGTCCTGAATTGGTATCGAGCTAAAGAATAACGTGAATCGAATCCAAGCCAATATGGGGAAATGCCAATTTGTTTAGACCTTACCTTCGTAAGTTTATTCTTGTCTTCTTTGATGACATATTGATCTATAGCATGAATTATGATGAACACTTATAGCACCTTTCTGTGGTCTTTAATGTTTTGGGAAAATTGACTCCAAGCCAATATGGGGAAATGTCAGTTTGTGAGAACACAAATTGAATACTTGGGGCATTGGATTTCAGCTCAAAGAGTAGAGGGTGATCTAGAGAAAGTCAGGGCAATGGTAGAATGGCCTCGACTTCAAAACATCCAAGAACTTAGGGGGTTTTTGGGTTGACCGACTATTATAGGCGTTTCGTTTGAAATTATGGTAAGATGGAAGCTCCATTATTGACTCAATTGTTGAAAATAGGAACTTTCGAACGGAAATAAGAGGCCACGATAGCTTTTGAGCAACTAAAGAAAACAATGGTAACTTTGTCTTTTCTTGCTCTATCGAATTTCAATCAACCATTTGTGGTGAAAACGGATGTCTCTTGCACGGGGTTGGGAGCAATCTTATCTCAGAAGAAGAACCCCACTACGTATTTCAATCATACTTTGTCAACCAAAGGCCAGTAGAAATCGATTTATGAATGAGAACTAATGGCAATAGTATTGGTTGTTCAGCGTTGGAGACCATACCTTTTGGGGCAAAAATTTGTGGTGAGAACGGATCAGATCATCGAGCAATAAAATATTTGTTAGAGCAAAGAGTGATACAACCTCAATATCAAAAGTGGCTATCAAAACTCCTCAGCTATGATTTTGAAGTTGAATATAGGTCAAGACCTGAAAATAAAGTAGTTGATGGCTTATCTTGAGTAGTATTAGTGGCACAACTGGCCCATTTAACCACCCTTGCTATTCTTAATGTCGAAGTAGTCAAACGAGAGGTTGCAGAGAATCTGAAGCTAATGAAGATTATTAAACAGTTGGAGGAAGATGTTGATAATGTTCCAAAATTTGAATTCGTTCAAGGGAAGTTATTATACAAAGAAAGCTTAGTTCTCTCTAAAAACATCTTCTTTGATTTTGGTTATGTTACATACGTTCCATGACTCTATTTTGGGTGGGCATTTGGGGATCCTAAGGACATATAAAAGATTGACTGGGGAACTTTATTGGAAGGGAATGAAAGTTATGTTAAGACCCATGTAGCTACGTCCCCAATTGACCTTTTACAACCACCGGATATTCCTGAGAAAATATGGGAGGACCTCACGATGGATTTTATAGAGGGTTTGTCGAAAGCAAATGGATTTGATACTATACCGGTCGTAGTGGACAGGTTGAGCAAGGCAGCTCATGTTTTGAGCTTGAAACATCCATTCACTGCGAAAGCTATAGCAAAAGTTTTTGTGAAGGAAATTGTTTGCCTCCATGGCTTCCTAAAGTTTATCATATCTGACCGAGATAAGATCTTTCTGAGTAATGTTTGGTCTGAATTATTTAGGATGCAAGGGCACTAAACTATGTAGAAGTACTGCTTACCATCCATAGTTCAATGGGCAGTCTAAAGTGGTAAACAAATGTGTGAGTCAAGATCTACTTCCACTGTTTCTGTAGAGAACATCCAAAAAATGGATATCTTGGCTTGGCTGGATGGAATACTGGTACAATACCACATTCCATAATTCGATCGGAATGACTCCCTTCCAGGCGGTTTATGGTCGAATTCTTCCACCCCTACTGACTTATTGTGATATGAGAACTACTAATGCCACTCTAAATCAATAGCTGATTGAAAGAGATGCGACATTGAAGATGCTGAAGGATCATTTGCAGATAGCCCAAGAAAGAATGAAGAAGTTTGTTGATTGAAAAAAAAAGAGAGAAATGAGTTTCGAGGTAGGAGATTGGGTGTTTTTAAAGATTCAGCCCTATCGAAAAACATCCCTTGCTAAGAGAAGAAATGAGAAGCTGACACCCAAATTCTTTGGGCCATATCAGGTGGAGTGAGAGGTAGGAGCAGTGGCTTACCGATTACAACTACCAATAGAGCCATCTATTCACCCTATGTTCCACATATCACAGTTGAAGCAGGCTTTGGGAAATCATCAGACGACAAAGGACGGACCCCATTGCTGACAGAAGACTATGAGTGGATAGCAGCTCTAGCCGAAGTCTTTGCTTTTAACCCTCACTATACTGAGGTACTGATTAGTTGGAAGGGTCTTCCCAACATGAAGATACATGGGAGAAAGTGGAAGATTTTAAACAAAAGTTCCATAATTTCAACCTTGGGGACAAGGTTTTGAGCAACTCAAGTGTATTGTTAAGCCACCAATAACTAAAGTCTATATGACGAAGGGAAGAAAAAAATGCACAGGGAAGAGTTAGTTATGTAGGGGAACGTGCTGAGGGTAGAAGGGGGACCACTGTGGTCCCGATAAGAGAGGCTGGAATGTTTGTTCTATTGGGTTGGGTAGTACATAAGTTCTATCTTTTGTTTTTTTAGGGTTGATCTGATTTTTCTGCTGAATGTTGTGTGAGAGGAAGAGCCACCAACATCCTAGAATTTGCTAGATGTAGAGAGTAGTAGCTTTGTTGATAGCAAAAATCTTTTAAGGGAAGTTACGTCCCTTGCCATTATAGAGCCATGATAGGAAAAAAGAAGCACCATGAAGAGAAAGAATCACAACATCAATGGATCACAGGCGAGGGCAAGTTATCCCAAAGAAGGGGAGAGGAAGGCCAAAGTGATCAAAGCAAGTTACAAAAGTGGAGATACCCATATTTTTCATTGAAGATCCACACAGATGAGTGGTTGTTCAGGGTCAAGTAGTATTTTGAGACACGCTACTTAATCGACTCAAACAAGTTAATGGTCTTTCTGGTAAGTTTTAATAGGGAAACATTATCTTAGTACCATGGGTAGAAAATAGAAAGGTTGTTAATTCGTTTCAGACCTTCACCAGAAGGGAGTTTGGATCTAGTTGCATTACCTCACCTAACAAATGACGTGTTAGGGAACACTTTCCCCAATGGGCTGGATCTAGTTGTTCGACTTGAGTTCTTTACTCTGAACCTATTGAGCTTGATAATATGATGAAAACGACCCAGCTGGTTAAGGATAGAAATGAAGCCCTAAAACTCTCTCAAGTGCCCAATACTGCGAGAATTGTGCATAATTTGGACCTACAAGACCAATAATTCTGACTTAAACCTTAGATCCTATGCCAACCCAAACAGGAATGCTAACAAAGAAAGTTTCCACCCTCGTAGGATCAACCCTGCAAAAAAAGCTTATCAATGACAAATTTGAGGTTAAAAGGGAAACAAGATTTTGCTTCCATTGAGAAGAAAAGTAGTAGAGTCGGTGATAGGAGCCTTCTCTATCACCATTGAATGCGTCTTTTACGGCCATATTCAAGGTTGGGTCACCAGAGTTTATGGCCCTTGTTTAGTTAAGAACATAAAGGCTTTCTTGCAAGAGCTTTTTGATTTGACAGGGCTTTGCCAAGGTATTTGGTGTGTGGCTGGTGGCTGGAGATTTCAGATGGATTGAAGATAGATTGTATGCTAACAGGCCTAATAGAAGTATGAGGAAATTCAATCGATTTGTTTCCCTATGTGAGCTAATTGATATTCCTATGGCTAATGGCAGGTTCACGTGGATTAGGATGGGTGAAAGAGTGGCGGCTTCGAGGCTGGACAAAATGCTCATTTCTAGAGATTGGGCGGATGTGTTTAAGGAGTTCAAGCTTGACAGATTGCAACGCCCCACTTTTAACCACTTTTCGATTGCTCTATCCATAGGTGCTATGAAATGGGGCCCCTCTCCTTTTAGATTCGAGAACAGGTGGCTAGAAAACCCAAATTTCAAAAAGAACATGGAAAAATAGTGGAACAATCAGAGTTCGATTGGGTGGGCTGGCTTTAGGTTTATGGCCAAGTTGAAAAGGACTATAAGATCACATAAGGGTGTGGAATAAAGAAGTCTTTGGCAACCTTAATGAGAAGAAAAGTAACATCTTTCAAGGGATTGATCAACTGGATTCTTTGGAGGAACAAGGCTCTATTTAGCCACATGAAATCGATGAAAGAGCTACCTTGAGAACTTTGCTAGAAATGACAATGAATGATCATAAAAGACTTAATAAAACATGTAAAATCAAATGGATGAAGGAAGGGGGTGAAAACACCTCTTTTTTCTATAGATGGGCCTCAGTCATGAAAAACAAAGTGTACATTGCAGCCTTAGATAGTGAAGATGACCGATTTTTGTCCTCAGAAGGTGAGATTGAGGAGGAGATCATTCAGTTTTATAAAAAGTTGTACACGAGGGATGAGAGTCCTCGTTTTGTGATAGATAATATCAATTAGGCTCCAATTGATGAGCACAGCAGGGCCTCTCTAGAAGAATCTTTTAGTGAGGAGGAGATTTTTAGAGCTATTAAAGGTCTTGGTAGTCAGAAATCCTTGGGCCCTAATGGTATGACCAATGAGCATTTCAAAAACTTCTGGAACATTTTGAAGCCACATTTAGTAGAGGTGTTCCACGAGTTTTTAAAAAACGGTATCATCAATAGAAGGACGAATGAGACGTACGTATGTTTGATCCCAAAGAAGAAAAATGCCTCCAACATTCGGGACTTTAGACCTATTAGCTTGGTGACCTCCTCATACAAAATTATAGCAAAAGTCCTTGCTGAAAGATTGAAGAAAGCTCTTGCTCAGACGATAAGTGATTGCCAAGCTACTTTTGTTCATGGTAGACAGGTTTTAGATCTGATTCTCGTGGCCAATGAGAGGTGGAGGAGTATAGACTCAATGAGAAGGAAGGACTCTTGTTGTAACAACCAAAAAGAAAAAAAAATGAGGGAGGTTTTACCCGGTCAAGAGGGAGAAAAGGGGGAAGTTTTACTCTTCCCCCCCCCCCAATTTTTGATCAAAAGGGGTCTATTTAAAAAAAAGGATTTTTTTCTTTTGAAATCCTCGATTCTCTCTCTCTCAAACCCTTTCTCACTCACTCACTCTCTCTCTCTCGTCTTCAGCAAACCAGTCATCGTCGTCGTCGTCGACCATCCACGTTGTCGTAGCTTTCCGGTGAGTCTCCTCTTGCATCCCTCTTGTTTTCTTTCTCTCTCCCTCGCTCATTATTCTCCCTTTCGTCTCCTTGCTCAGATCGCTGTCGTTGCCGAGTGTGGTCCGTGAGCTCAGGTCGGTTCGTCGCTGCTGTCGTCGTTGTTTCTCCCTCTCACCCGCTTGCTCCTTTCTTTCGTCTACTACCCATCGCCTTAGATCCGCCGCTACCATCGTGAATGTCGTCGCTACTCACACTGTTGTGAGCCACCGCCGTCTCTCTCATCTTTCGGTAAAGACCTCTCTCTCTCTGCATCACTTCCCTTCTCTCTAACCCTCTGTGTTTTTCTCTCACTCTCCAGTCACCTCCAGCGAGTTCGAGCCACATTAGATCTTGAATTTTCGTCGGCTTTGATTAATCAATCAATGGGTAAGAAAGATTTAGTAAGATTTGGATCCTTAATTTCGTTTGTAAGCCTTTAATGGAATACCCATTGACGTTCGGGTCTTAATTTAAGGTACCCATAGCAATTAATGGTTGAATCTTTAAAGGTGGAGTGAAATTTGAACCTAGGCAGCAAGCGTTAGTTTCGTTTGGGTGGTTTCGACCTTCTCAAATCATGTCGTTTTTATGAAAATTATTGGAATTGAATGCCTGTAATGTTAGAACCTTGTGTGTGATATTAGATTACGTTATTCGCATAACTTGATTGGCACCATATCAAATTAATTGGAGTTATTCAATCAAGCATTAGTTACCCCAAGGTAAGTAACTTACTGTCTTAGTCTGTTTATATGAAACTTCTACTTGGTTGGTTGTTCTGAATTGATTGGGAAGACATGGATGCCTCTGTTTGGAATTTGGTGCATGTTGTAGGAAATATTTGCCCTATGATATGGTTAGGCCACATGCTGTTAATGCATGATTGTTATATATTTTGGATGGCTGGCTTTGAATGTTGAGTTATAGAAATTTGTGGTTCTTTATAGAATTTTGGATGCCAATCATGGTTTCTGTACTTGAATGAGACGAGATGTAATGTGGTGAAAGCATGATAAATTAGCCTTCAGAAACACTTTAGGGGAAGGAACCAGTTGGTTAGTTGCAGTTAAGTCATGCTATGTGCAAAGGGTCCTAATAGGGAAAAGAACAAACTTTTTATCCTAGTAGGGGTCATGGCAATGAATCACCTAGGATTGAGATGTTTATAGACATAGATGAGGAGCTAAATGGGCGGGACTCGGCTTCGCAGACTAGGTGCCATCTACTAATTGTGGAAGTAAAGTTTCAACTAAAAACCCATGGATGCCCCACCAGTGAGATGGTAGCTAGAGTGTTATGCGCTCATAGGTGCCTTGATGGGTGAGACTCGACTCCACTGACTGGGTGCCTTCTACCATCGATAGGAGTTGAGATCTCGCTTGATTCCCACATGTGCACCTCCAGTGAGTTGGCAAGTGTATGATAAGAGGATTAATTGTCCACGTGATCCATACGTCATGATGAATGAAATGAAATGAAATGACATGAAATGATCATCAAGCCCTTAGCTAAACTAACCATAAGTCACCCCTATTGATAAACTAACCATAAGTCACCCCTGTTGATGCATGTCTAGCAGTATTGTTGCTTACTGAGTATTTTTAAATACTCATTCTTTTCCCTAATATGTAATTGCAGGTAACAGCAAAGGTGAACATAACGCGCGACAGAATGTTGTTGGATGAGCCGTGGAATTTCGTAGAATAGACTTCCGCTTATCACGTTTTTTAACTTCTTCTTTGCATTTCAATATGTTTTGTTTTAGAACTTGTTTTGCTTTTGAGATCCTTATTGAAATGATTAAATTTTATTTGTTCCTGTTTTAACTGGGATCCCAGGCTGGAAAGTCCTTTTTTATTAACTAAGCTTATTTTACGTTAAATGCTCATTTTCATCGTTGTTCTCTAAAAGTAAGAAGGTAATGCATGTGGTAATGACCCTAGGAATTAGTCATGAAATGTAGGGTCGTTACACTTATTGAAGCTAGATTTAGAAAAAGCTTTTGATAAAGTTAGTTGGGAATTCCTCGATGTCATCCTTAATCTCAAAGCCTTCGGTAAAACTTGGAGAAAATGGATTAAGGGTTGCCTTACAAACACCAACTTTTCGATTATTATTAATGGTAGACCGAGGGGCAAGATACGAGCTTCTAGAGGGTTGAGACCAGGAGATCCCATTTCCCTCTTCCTTTATACTATTGTGGGAGATGCTATGAGTCAATTGATTCAATACTGTATAGAGAGGAAAATTCTAAAAGGCCCCTCGGGGGGAAAAAACATAGTTGAAGTAGCCATGCTCCAATTTTCCGATGATACCATGATCTTTTGCCCAAACAAGGAGGAGATTATGGACAAATGGTGGGAGATTTTGAGATTGATCTTAGAAGGGGCAGGATTGTCCATGAGCCATGCCAAAATCTCGATCATTGGTATCAACATGAATGTGGATAAAATCAAAGATAGGGCAGACAAAATGGATGGTAAGGTTGAGAGTTTTGTGAGGTATCCTCACTACGATATATTGATATTTAGAGAAAGAGTTCCAAAAGGGAATTACAAAACTTTCGGCCAATTTGAGAGGGCCAATAATCTTTCCCCTCTCTCTCTAGCTTTCAGCTAA

mRNA sequence

ATGGTCATGGAGCGACTGAAAGAGAACAATAGTGACCGGAGTAAACTTAAGAAGGTTGAGATGCCTGTGTTCGGTGGAGATGAACCAAATTCTTGGTTGTTTCATGTCGATAGTTATGTTAAGACCCATGTAGCTACGTCCCCAATTGACCTTTTACAACCACCGGATATTCCTGAGAAAATATGGGAGGACCTCACGATGGATTTTATAGAGGGTTTGTCGAAAGCAAATGGATTTGATACTATACCGGTCGTAGTGGACAGGTTGAGCAAGGCAGCTCATGTTTTGAGCTTGAAACATCCATTCACTGCGAAAGCTATAGCAAAAGTTTTTGTGAAGGAAATTGTTTGCCTCCATGGCTTCCTAAAAGAACATCCAAAAAATGGATATCTTGGCTTGGCTGGATGGAATACTGGTGGAGTGAGAGGTAGGAGCAGTGGCTTACCGATTACAACTACCAATAGAGCCATCTATTCACCCTATGTTCCACATATCACAGTTGAAGCAGGCTTTGGGAAATCATCAGACGACAAAGGACGGACCCCATTGCTGACAGAAGACTATGAGTGGATAGCAGCTCTAGCCGAAGTCTTTGCTTTTAACCCTCACTATACTGAGGGCTTTGCCAAGGTATTTGGTGTGTGGCTGGTGGCTGGAGATTTCAGATGGATTGAAGATAGATTGTATGCTAACAGGCCTAATAGAAGTATGAGGAAATTCAATCGATTTGTTTCCCTATGTGAGCTAATTGATATTCCTATGGCTAATGGCAGGTTCACGTGGATTAGGATGGGTGAAAGAGTGGCGGCTTCGAGGCTGGACAAAATGCTCATTTCTAGAGATTGGGCGGATGTGTTTAAGGAGTTCAAGCTTGACAGATTGCAACGCCCCACTTTTAACCACTTTTCGATTGCTCTATCCATAGGTGCTATGAAATGGGGCCCCTCTCCTTTTAGATTCGAGAACAGGGCCTCTCTAGAAGAATCTTTTAGTGAGGAGGAGATTTTTAGAGCTATTAAAGGTCTTGGTAGTCAGAAATCCTTGGGCCCTAATGGTATGACCAATGAGCATTTCAAAAACTTCTGGAACATTTTGAAGCCACATTTAGTAGAGGTGTTCCACGAGTTTTTAAAAAACGGTATCATCAATAGAAGGACGAATGAGACGTACGTATGTTTGATCCCAAAGAAGAAAAATGCCTCCAACATTCGGGACTTTAGACCTATTAGCTTGGTGACCTCCTCATACAAAATTATAGCAAAAGTCCTTGCTGAAAGATTGAAGAAAGCTCTTGCTCAGACGATAAGTGATTGCCAAGCTACTTTTGTTCATGCAAACCAGTCATCGTCGTCGTCGTCGACCATCCACGTTGTCGTAGCTTTCCGATCGCTGTCGTTGCCGAGTGTGGTCCGTGAGCTCAGGTCGGTTCGTCGCTGCTGTCGTCGTTGTTTCTCCCTCTCACCCGCTTGCTCCTTTCTTTCGTCTACTACCCATCGCCTTAGATCCGCCGCTACCATCGTGAATGTCGTCGCTACTCACACTGTTGTGAGCCACCGCCGTCTCTCTCATCTTTCGGGAAAAGAACAAACTTTTTATCCTAGTAGGGGTCATGGCAATGAATCACCTAGGATTGAGATGTTTATAGACATAGATGAGGAGCTAAATGGGCGGGACTCGGCTTCGCAGACTAGGTGCCATCTACTAATTGTGGAAGTAAAGTTTCAACTAAAAACCCATGGATGCCCCACCAGTGAGATGGTAGCTAGAGTGTTATGCGCTCATAGGTGCCTTGATGGTTGGGAATTCCTCGATGTCATCCTTAATCTCAAAGCCTTCGGTAAAACTTGGAGAAAATGGATTAAGGGTTGCCTTACAAACACCAACTTTTCGATTATTATTAATGGTAGACCGAGGGGCAAGATACGAGCTTCTAGAGGGTTGAGACCAGGAGATCCCATTTCCCTCTTCCTTTATACTATTGTGGGAGATGCTATGAGTCAATTGATTCAATACTGTATAGAGAGGAAAATTCTAAAAGGCCCCTCGGGGGGAAAAAACATAGTTGAAGTAGCCATGCTCCAATTTTCCGATGATACCATGATCTTTTGCCCAAACAAGGAGGAGATTATGGACAAATGGTGGGAGATTTTGAGATTGATCTTAGAAGGGGCAGGATTGTCCATGAGCCATGCCAAAATCTCGATCATTGGTATCAACATGAATGTGGATAAAATCAAAGATAGGGCAGACAAAATGGATGGTAAGGTTGAGAGTTTTGTGAGGTATCCTCACTACGATATATTGATATTTAGAGAAAGAGTTCCAAAAGGGAATTACAAAACTTTCGGCCAATTTGAGAGGGCCAATAATCTTTCCCCTCTCTCTCTAGCTTTCAGCTAA

Coding sequence (CDS)

ATGGTCATGGAGCGACTGAAAGAGAACAATAGTGACCGGAGTAAACTTAAGAAGGTTGAGATGCCTGTGTTCGGTGGAGATGAACCAAATTCTTGGTTGTTTCATGTCGATAGTTATGTTAAGACCCATGTAGCTACGTCCCCAATTGACCTTTTACAACCACCGGATATTCCTGAGAAAATATGGGAGGACCTCACGATGGATTTTATAGAGGGTTTGTCGAAAGCAAATGGATTTGATACTATACCGGTCGTAGTGGACAGGTTGAGCAAGGCAGCTCATGTTTTGAGCTTGAAACATCCATTCACTGCGAAAGCTATAGCAAAAGTTTTTGTGAAGGAAATTGTTTGCCTCCATGGCTTCCTAAAAGAACATCCAAAAAATGGATATCTTGGCTTGGCTGGATGGAATACTGGTGGAGTGAGAGGTAGGAGCAGTGGCTTACCGATTACAACTACCAATAGAGCCATCTATTCACCCTATGTTCCACATATCACAGTTGAAGCAGGCTTTGGGAAATCATCAGACGACAAAGGACGGACCCCATTGCTGACAGAAGACTATGAGTGGATAGCAGCTCTAGCCGAAGTCTTTGCTTTTAACCCTCACTATACTGAGGGCTTTGCCAAGGTATTTGGTGTGTGGCTGGTGGCTGGAGATTTCAGATGGATTGAAGATAGATTGTATGCTAACAGGCCTAATAGAAGTATGAGGAAATTCAATCGATTTGTTTCCCTATGTGAGCTAATTGATATTCCTATGGCTAATGGCAGGTTCACGTGGATTAGGATGGGTGAAAGAGTGGCGGCTTCGAGGCTGGACAAAATGCTCATTTCTAGAGATTGGGCGGATGTGTTTAAGGAGTTCAAGCTTGACAGATTGCAACGCCCCACTTTTAACCACTTTTCGATTGCTCTATCCATAGGTGCTATGAAATGGGGCCCCTCTCCTTTTAGATTCGAGAACAGGGCCTCTCTAGAAGAATCTTTTAGTGAGGAGGAGATTTTTAGAGCTATTAAAGGTCTTGGTAGTCAGAAATCCTTGGGCCCTAATGGTATGACCAATGAGCATTTCAAAAACTTCTGGAACATTTTGAAGCCACATTTAGTAGAGGTGTTCCACGAGTTTTTAAAAAACGGTATCATCAATAGAAGGACGAATGAGACGTACGTATGTTTGATCCCAAAGAAGAAAAATGCCTCCAACATTCGGGACTTTAGACCTATTAGCTTGGTGACCTCCTCATACAAAATTATAGCAAAAGTCCTTGCTGAAAGATTGAAGAAAGCTCTTGCTCAGACGATAAGTGATTGCCAAGCTACTTTTGTTCATGCAAACCAGTCATCGTCGTCGTCGTCGACCATCCACGTTGTCGTAGCTTTCCGATCGCTGTCGTTGCCGAGTGTGGTCCGTGAGCTCAGGTCGGTTCGTCGCTGCTGTCGTCGTTGTTTCTCCCTCTCACCCGCTTGCTCCTTTCTTTCGTCTACTACCCATCGCCTTAGATCCGCCGCTACCATCGTGAATGTCGTCGCTACTCACACTGTTGTGAGCCACCGCCGTCTCTCTCATCTTTCGGGAAAAGAACAAACTTTTTATCCTAGTAGGGGTCATGGCAATGAATCACCTAGGATTGAGATGTTTATAGACATAGATGAGGAGCTAAATGGGCGGGACTCGGCTTCGCAGACTAGGTGCCATCTACTAATTGTGGAAGTAAAGTTTCAACTAAAAACCCATGGATGCCCCACCAGTGAGATGGTAGCTAGAGTGTTATGCGCTCATAGGTGCCTTGATGGTTGGGAATTCCTCGATGTCATCCTTAATCTCAAAGCCTTCGGTAAAACTTGGAGAAAATGGATTAAGGGTTGCCTTACAAACACCAACTTTTCGATTATTATTAATGGTAGACCGAGGGGCAAGATACGAGCTTCTAGAGGGTTGAGACCAGGAGATCCCATTTCCCTCTTCCTTTATACTATTGTGGGAGATGCTATGAGTCAATTGATTCAATACTGTATAGAGAGGAAAATTCTAAAAGGCCCCTCGGGGGGAAAAAACATAGTTGAAGTAGCCATGCTCCAATTTTCCGATGATACCATGATCTTTTGCCCAAACAAGGAGGAGATTATGGACAAATGGTGGGAGATTTTGAGATTGATCTTAGAAGGGGCAGGATTGTCCATGAGCCATGCCAAAATCTCGATCATTGGTATCAACATGAATGTGGATAAAATCAAAGATAGGGCAGACAAAATGGATGGTAAGGTTGAGAGTTTTGTGAGGTATCCTCACTACGATATATTGATATTTAGAGAAAGAGTTCCAAAAGGGAATTACAAAACTTTCGGCCAATTTGAGAGGGCCAATAATCTTTCCCCTCTCTCTCTAGCTTTCAGCTAA

Protein sequence

MVMERLKENNSDRSKLKKVEMPVFGGDEPNSWLFHVDSYVKTHVATSPIDLLQPPDIPEKIWEDLTMDFIEGLSKANGFDTIPVVVDRLSKAAHVLSLKHPFTAKAIAKVFVKEIVCLHGFLKEHPKNGYLGLAGWNTGGVRGRSSGLPITTTNRAIYSPYVPHITVEAGFGKSSDDKGRTPLLTEDYEWIAALAEVFAFNPHYTEGFAKVFGVWLVAGDFRWIEDRLYANRPNRSMRKFNRFVSLCELIDIPMANGRFTWIRMGERVAASRLDKMLISRDWADVFKEFKLDRLQRPTFNHFSIALSIGAMKWGPSPFRFENRASLEESFSEEEIFRAIKGLGSQKSLGPNGMTNEHFKNFWNILKPHLVEVFHEFLKNGIINRRTNETYVCLIPKKKNASNIRDFRPISLVTSSYKIIAKVLAERLKKALAQTISDCQATFVHANQSSSSSSTIHVVVAFRSLSLPSVVRELRSVRRCCRRCFSLSPACSFLSSTTHRLRSAATIVNVVATHTVVSHRRLSHLSGKEQTFYPSRGHGNESPRIEMFIDIDEELNGRDSASQTRCHLLIVEVKFQLKTHGCPTSEMVARVLCAHRCLDGWEFLDVILNLKAFGKTWRKWIKGCLTNTNFSIIINGRPRGKIRASRGLRPGDPISLFLYTIVGDAMSQLIQYCIERKILKGPSGGKNIVEVAMLQFSDDTMIFCPNKEEIMDKWWEILRLILEGAGLSMSHAKISIIGINMNVDKIKDRADKMDGKVESFVRYPHYDILIFRERVPKGNYKTFGQFERANNLSPLSLAFS

Homology

[Close]

BLAST of Lag0032116 vs. NCBI nr
Match: CAN70693.1 (hypothetical protein VITISV_041975 [Vitis vinifera])

HSP 1 Score: 280.4 bits (716), Expect = 4.8e-71
Identity = 183/597 (30.65%), Postives = 278/597 (46.57%), Query Frame = 0


Query: 182  PLLTEDYEWIAALAEVFAFNPHYTEGFAKVFGVWLVAGDFRWIE---DRLYANRPNRSMR 241
            PLL +D+ W+  L ++F+ +          F +W V GDF  I+   ++L  +    SM+
Sbjct: 928  PLLRKDF-WV-ELLDIFSLS----------FLLWCVGGDFNVIKRSSEKLGGSSLTSSMK 987

Query: 242  KFNRFVSLCELIDIPMANGRFTWIRMGERVAASRLDKMLISRDWADVFKEFKLDRLQRPT 301
             F+ F+  CEL+D P+ N  FTW  M E     RLD+ L S +W   F +   + L R T
Sbjct: 988  DFBXFIRECELLDPPLRNAPFTWSNMQESPVCKRLDRFLYSNEWEHHFPQSLQEALPRRT 1047

Query: 302  FNHFSIALSIGAMKWGPSPFRFE---------------NRASLEESFSEEEIFRAIKGLG 361
             +H+ I L     KWGP+PFRFE               N   L+  F+EEEI++AI  L 
Sbjct: 1048 SDHWPIVLETNXFKWGPTPFRFENMWLQHPSFKECFKKNAFRLDSLFTEEEIYKAIFQLD 1107

Query: 362  SQKSLGPNGMTNEHFKNFWNILKPHLVEVFHEFLKNGIINRRTNETYVCLIPKKKNASNI 421
              K+ GP+G T   F++ W+++K  LV VF EF  + IIN+ TN +++ L+PKK     I
Sbjct: 1108 RDKASGPDGFTIAVFQDCWDVIKEDLVRVFAEFHSSXIINQSTNASFIVLLPKKSMTKKI 1167

Query: 422  RDFRPISLVTSSYKIIAKVLAERLKKALAQTISDCQATFVHANQSSSSSSTIHVVVAFRS 481
             +FRPISL+TS YKIIA VL+ RL+  L +TI   Q  FV   Q                
Sbjct: 1168 SBFRPISLITSLYKIIANVLSGRLRGVLHETIHSTQGVFVQGRQ---------------- 1227

Query: 482  LSLPSVVRELRSVRRCCRRCFSLSPACSFLSSTTHRLRSAATIVNVV-ATHTVVSHRRLS 541
                                                      I++VV  T+ +V  +R  
Sbjct: 1228 ------------------------------------------ILDVVLITNEIVDKKR-- 1287

Query: 542  HLSGKEQTFYPSRGHGNESPRIEMFIDIDEELNGRDSASQTRCHLLIVEVKFQLKTHGCP 601
              SG+E+  +               ID  +  +          H+               
Sbjct: 1288 -RSGEEEVVFK--------------IDFKKAYD----------HV--------------- 1347

Query: 602  TSEMVARVLCAHRCLDGWEFLDVILNLKAFGKTWRKWIKGCLTNTNFSIIINGRPRGKIR 661
                             W+FLD +L  K F   W+KW++GCL+  +F+I++NG  +G ++
Sbjct: 1348 ----------------SWDFLDYVLEKKGFSPRWKKWMRGCLSTVSFAILVNGNAKGWVK 1396

Query: 662  ASRGLRPGDPISLFLYTIVGDAMSQLIQYCIERKILKGPSGGKNIVEVAMLQFSDDTMIF 721
            ASRGLR GDP+S FL+T+V D +S+++    ER  L+G   G+N   V+ LQF+DDT+ F
Sbjct: 1408 ASRGLRQGDPLSPFLFTLVADVLSRMLLRAEERNSLEGFRVGRNSTRVSHLQFADDTIFF 1396

Query: 722  CPNKEEIMDKWWEILRLILEGAGLSMSHAKISIIGINMNVDKIKDRADKMDGKVESF 760
                EE +     +L +    +GL ++  K +I GIN+  + +   A+ +D K   +
Sbjct: 1468 SNTSEEDLQTLKSLLLVFGHISGLKVNLDKSNIYGINLEQNHLSRLAELLDCKASGW 1396

[Close]

BLAST of Lag0032116 vs. NCBI nr
Match: RVX23043.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 259.2 bits (661), Expect = 1.1e-64
Identity = 181/636 (28.46%), Postives = 270/636 (42.45%), Query Frame = 0


Query: 215 WLVAGDFRWI---EDRLYANRPNRSMRKFNRFVSLCELIDIPMANGRFTWIRMGERVAAS 274
           W V GDF  I    ++L  +R   SM+ F+ F+S CELID+P+ +  FTW+ M       
Sbjct: 265 WCVGGDFNVIRRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWLNMQVNPVCK 324

Query: 275 RLDKMLISRDWADVFKEFKLDRLQRPTFNHFSIALSIGAMKWGPSPFRFE---------- 334
           RLD+ L S +W   F +     L R T +H+ I L     KWGP+PFRFE          
Sbjct: 325 RLDRFLYSNEWEQAFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFK 384

Query: 335 ----------------------------------NRAS---------------------- 394
                                             N+AS                      
Sbjct: 385 ENFGRWWREFQGNGWEGHKFMRKLQFVKAKLKVWNKASFGELKSIKEEILRYFEKLYTSP 444

Query: 395 ----------------------LEESFSEEEIFRAIKGLGSQKSLGPNGMTNEHFKNFWN 454
                                 LE  F+EEEIF+AI  +   K+ GP+G T   F++ W 
Sbjct: 445 SGESWRVEGLDWSPISGESAFRLESPFTEEEIFKAIFQMDRDKAPGPDGFTIAVFQDCWE 504

Query: 455 ILKPHLVEVFHEFLKNGIINRRTNETYVCLIPKKKNASNIRDFRPISLVTSSYKIIAKVL 514
           ++K  LV+VF EF ++GIIN+ TN +++ L+PKK  +  I DFRPISL+TS YKIIAKVL
Sbjct: 505 VIKEDLVKVFAEFHRSGIINQSTNASFIVLLPKKSMSRRISDFRPISLITSLYKIIAKVL 564

Query: 515 AERLKKALAQTISDCQATFVHANQSSSSSSTIHVVVAFRSLSLPSVVRELRSVRRCCRRC 574
           A R++  L +TI   Q  FV   Q   +                                
Sbjct: 565 AGRIRGVLHETIHSTQGAFVQGRQILDA-------------------------------- 624

Query: 575 FSLSPACSFLSSTTHRLRSAATIVNVVATHTVVSHRRLSHLSGKEQTFYPSRGHGNESPR 634
                                    V+  + +V  +R    SG+E   +           
Sbjct: 625 -------------------------VLIANEIVDEKR---RSGEEGVVFK---------- 684

Query: 635 IEMFIDIDEELNGRDSASQTRCHLLIVEVKFQLKTHGCPTSEMVARVLCAHRCLDGWEFL 694
               ID ++  +          H+                                W+FL
Sbjct: 685 ----IDFEKAYD----------HV-------------------------------SWDFL 744

Query: 695 DVILNLKAFGKTWRKWIKGCLTNTNFSIIINGRPRGKIRASRGLRPGDPISLFLYTIVGD 754
           D +L +K FG  WRKW+ GCL++ +F++++NG  +  ++ASRGLR GDP+S FL+TIV D
Sbjct: 745 DHVLEMKGFGSRWRKWMSGCLSSVSFAVLVNGNAKRWVKASRGLRQGDPLSPFLFTIVAD 785

Query: 755 AMSQLIQYCIERKILKGPSGGKNIVEVAMLQFSDDTMIFCPNKEEIMDKWWEILRLILEG 760
            +S+++    ER +L+G   G+N   V+ LQF DDT+ F  ++EE M     +L +    
Sbjct: 805 VLSRMLLKAKERNVLEGFKVGRNRTRVSHLQFVDDTIFFSSSREEDMMTLKNVLLVFGHI 785

[Close]

BLAST of Lag0032116 vs. NCBI nr
Match: BBH07150.1 (TatD related DNase [Prunus dulcis])

HSP 1 Score: 258.8 bits (660), Expect = 1.5e-64
Identity = 187/647 (28.90%), Postives = 269/647 (41.58%), Query Frame = 0


Query: 204 YTEGFAKVFGV----WLVAGDF---RWIEDRLYANRPNRSMRKFNRFVSLCELIDIPMAN 263
           + E  A ++G     W + GDF   R+  ++    R  +SMR FN F+    L D  + N
Sbjct: 108 FWEELADLYGYCGDKWCLGGDFNVVRFSAEKSNEGRVTKSMRDFNDFIQETNLRDPNLLN 167

Query: 264 GRFTWIRMGERVAASRLDKMLISRDWADVFKEFKLDRLQRPTFNHFSIALSIGAMKWGPS 323
             FTW  + E     RLD+ L+S  W D F  ++   L R T +H  I L    +KWGPS
Sbjct: 168 ASFTWSNLRENAVCRRLDRFLVSGSWEDHFPHYRHKALPRITSDHCPIELDTSRVKWGPS 227

Query: 324 PFRFEN------------------------------------------------------ 383
           PFRFEN                                                      
Sbjct: 228 PFRFENMWLKHPDFKRKIKLWWDEDQTPGWEGYKFMSRLKMLKSKLKVWSKEEFGDVERD 287

Query: 384 ----------------RAS------------------------------LEESFSEEEIF 443
                           R S                              LE  F  EE+ 
Sbjct: 288 LREAEARLLIGDLAQKRKSNGAKEESNENAGWGVDGLNWCPISQTEADWLERPFELEEVQ 347

Query: 444 RAIKGLGSQKSLGPNGMTNEHFKNFWNILKPHLVEVFHEFLKNGIINRRTNETYVCLIPK 503
           +A+   G  KS GP+G +   F++ W ++K  L++V  +F ++GI+N  TNET++CLIPK
Sbjct: 348 KAVFDCGKDKSPGPDGFSMSFFQSCWEVVKGDLMKVMQDFFQSGIVNGVTNETFICLIPK 407

Query: 504 KKNASNIRDFRPISLVTSSYKIIAKVLAERLKKALAQTISDCQATFVHANQSSSSSSTIH 563
           K N+  + DFRPISLVTS YK+I+KVLA RL++ L  TIS  Q  FV   Q   +     
Sbjct: 408 KANSVKVTDFRPISLVTSLYKVISKVLASRLREVLGNTISQSQGAFVQKRQILDA----- 467

Query: 564 VVVAFRSLSLPSVVRELRSVRRCCRRCFSLSPACSFLSSTTHRLRSAATIVNVVATHTVV 623
           V+VA        VV E+R   R                                      
Sbjct: 468 VLVA------NEVVEEVRKQNR-------------------------------------- 527

Query: 624 SHRRLSHLSGKEQTFYPSRGHGNESPRIEMFIDIDEELNGRDSASQTRCHLLIVEVKFQL 683
                             +G                               L+ ++ F+ 
Sbjct: 528 ------------------KG-------------------------------LVFKIDFEK 587

Query: 684 KTHGCPTSEMVARVLCAHRCLDGWEFLDVILNLKAFGKTWRKWIKGCLTNTNFSIIINGR 743
                           A+  ++ W F+D +L  K FG  WR WI GCL + NFSI+ING+
Sbjct: 588 ----------------AYDHVE-WNFVDDVLARKGFGVKWRGWIFGCLESANFSIMINGK 639

[Close]

BLAST of Lag0032116 vs. NCBI nr
Match: RVW50737.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])

HSP 1 Score: 256.5 bits (654), Expect = 7.4e-64
Identity = 174/599 (29.05%), Postives = 256/599 (42.74%), Query Frame = 0


Query: 215 WLVAGDFRWI---EDRLYANRPNRSMRKFNRFVSLCELIDIPMANGRFTWIRMGERVAAS 274
           W V GDF  I    ++L  +R   SM+ F+ F+S CELID+P+ +  FTW  M       
Sbjct: 36  WCVGGDFNVIRRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVCK 95

Query: 275 RLDKMLISRDWADVFKEFKLDRLQRPTFNHFSIALSIGAMKWGPSPFRFEN--------- 334
           RLD+ L S +W   F +     L R T +H+ I L     KWGP+PFRFEN         
Sbjct: 96  RLDRFLYSNEWEQTFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFK 155

Query: 335 ------------------------------------------------------------ 394
                                                                       
Sbjct: 156 ENFGRWWREFQGIGWEGHKFMRKLQFRSIKEEILRYFEKLYTSPSGESWRVEGLDWSPIS 215

Query: 395 ---RASLEESFSEEEIFRAIKGLGSQKSLGPNGMTNEHFKNFWNILKPHLVEVFHEFLKN 454
                 LE  F+EEEIF+AI  +   K+ GP+G T   F++ W ++K  LV+VF EF ++
Sbjct: 216 GESAVRLESPFTEEEIFKAIFQMDRDKAPGPDGFTIAVFQDCWEVIKEDLVKVFTEFHRS 275

Query: 455 GIINRRTNETYVCLIPKKKNASNIRDFRPISLVTSSYKIIAKVLAERLKKALAQTISDCQ 514
           GIIN+ TN +++ L+PKK  +  I DFRPISL+TS YKIIAKVLA R++  L +TI   Q
Sbjct: 276 GIINQSTNASFIVLLPKKSMSRRISDFRPISLITSLYKIIAKVLAGRIRGVLHETIHSTQ 335

Query: 515 ATFVHANQSSSSSSTIHVVVAFRSLSLPSVVRELRSVRRCCRRCFSLSPACSFLSSTTHR 574
             FV   Q   +                                                
Sbjct: 336 GAFVQGRQILDA------------------------------------------------ 395

Query: 575 LRSAATIVNVVATHTVVSHRRLSHLSGKEQTFYPSRGHGNESPRIEMFIDIDEELNGRDS 634
                    V+  + +V  +R    SG+E   +               ID ++  +    
Sbjct: 396 ---------VLIANEIVDEKR---RSGEEGVVFK--------------IDFEKAYD---- 455

Query: 635 ASQTRCHLLIVEVKFQLKTHGCPTSEMVARVLCAHRCLDGWEFLDVILNLKAFGKTWRKW 694
                 H+                                W+FLD +L +K FG  WRKW
Sbjct: 456 ------HV-------------------------------SWDFLDHVLEMKGFGIRWRKW 515

Query: 695 IKGCLTNTNFSIIINGRPRGKIRASRGLRPGDPISLFLYTIVGDAMSQLIQYCIERKILK 739
           ++GCL++ +F++++NG  +G ++ASRGLR GDP+S FL+TIV D +S+++    ER +L+
Sbjct: 516 MRGCLSSVSFAVLVNGNAKGWVKASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLE 519

[Close]

BLAST of Lag0032116 vs. NCBI nr
Match: RVW21770.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 254.2 bits (648), Expect = 3.7e-63
Identity = 177/621 (28.50%), Postives = 265/621 (42.67%), Query Frame = 0


Query: 212 FGVWLVAGDFRWI---EDRLYANRPNRSMRKFNRFVSLCELIDIPMANGRFTWIRMGERV 271
           F +W V GDF  I    ++L  +R   SMR F+ F+S  EL+D P+ N  FTW  M E  
Sbjct: 413 FPLWCVGGDFNVIRRSSEKLGGSRLTSSMRDFDSFISESELLDPPLRNASFTWSNMQESP 472

Query: 272 AASRLDKMLISRDWADVFKEFKLDRLQRPTFNHFSIALSIGAMKWGPSPFRFEN----RA 331
              RLD+ L S +W  +F +   + L R T +H+ IAL      WGP+PFRFEN      
Sbjct: 473 VCKRLDRFLYSNEWGQLFPQGIQETLIRRTSDHWPIALDTNPFTWGPTPFRFENMWLQHP 532

Query: 332 SLEESFS----------------------------------------------------- 391
           S +E+F                                                      
Sbjct: 533 SFKENFRNWWRGFQGNGWEGHKFMRRLQFVKAKAKEWNKLSFGVLNEKKKSILKDLANLD 592

Query: 392 -------------EEEIFRAIKGLGSQKSLGPNGMTNEHFKNFWNILKPHLVEVFHEFLK 451
                        EEEI +AI  +   K+ GP+G T   F++ W+++K  LV VF EF +
Sbjct: 593 AIEQDGGLTSELLEEEISKAIFQMDRDKAPGPDGFTIAVFQDCWDVIKEDLVRVFAEFHR 652

Query: 452 NGIINRRTNETYVCLIPKKKNASNIRDFRPISLVTSSYKIIAKVLAERLKKALAQTISDC 511
           +G+IN+ TN +++ L+PKK     I DFRPISL+TS YKIIAKVL+ RL+  L +TI   
Sbjct: 653 SGVINQSTNASFIVLLPKKSTTKKISDFRPISLITSLYKIIAKVLSGRLRGVLHETIHST 712

Query: 512 QATFVHANQSSSSSSTIHVVVAFRSLSLPSVVRELRSVRRCCRRCFSLSPACSFLSSTTH 571
           Q  FV   Q   +                                               
Sbjct: 713 QGAFVQGRQIMDA----------------------------------------------- 772

Query: 572 RLRSAATIVNVVATHTVVSHRRLSHLSGKEQTFYPSRGHGNESPRIEMFIDIDEELNGRD 631
                     V+  + +V  RR    SG+E   +               ID ++  +   
Sbjct: 773 ----------VLIANEIVDERR---RSGEEGVVFK--------------IDFEKAYD--- 832

Query: 632 SASQTRCHLLIVEVKFQLKTHGCPTSEMVARVLCAHRCLDGWEFLDVILNLKAFGKTWRK 691
                  H+                                W+FLD +L  K F   WRK
Sbjct: 833 -------HV-------------------------------RWDFLDQVLEKKGFSPKWRK 892

Query: 692 WIKGCLTNTNFSIIINGRPRGKIRASRGLRPGDPISLFLYTIVGDAMSQLIQYCIERKIL 751
           W+ GCL++ ++++++NG  +G ++ASRGLR GDP+S FL+T+V D +S+++    ER +L
Sbjct: 893 WMNGCLSSVSYAVLVNGSAKGWVKASRGLRQGDPLSPFLFTLVADVLSRMLVRAEERNML 918

Query: 752 KGPSGGKNIVEVAMLQFSDDTMIFCPNKEEIMDKWWEILRLILEGAGLSMSHAKISIIGI 760
           +G   G+N   V+ LQF+DDT+ F   +EE +     +L      +GL ++  K +I GI
Sbjct: 953 EGFRVGRNRTRVSHLQFADDTIFFSNTREEDLQTLKSLLLAFGHISGLKVNLDKSNIYGI 918

[Close]

BLAST of Lag0032116 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 6.9e-12
Identity = 44/129 (34.11%), Postives = 71/129 (55.04%), Query Frame = 0


Query: 313 WGPSPFRFENRAS-LEESFSEEEIFRAIKGLGSQKSLGPNGMTNEHFKNFWNILKPHLVE 372
           W   P   E R   LE   + +E+ +A++ +   KS G +G+T E F+ FW+ L P    
Sbjct: 431 WDGLPVVSERRKERLETPITLDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHR 490

Query: 373 VFHEFLKNGIINRRTNETYVCLIPKKKNASNIRDFRPISLVTSSYKIIAKVLAERLKKAL 432
           V  E  K G +        + L+PKK +   I+++RP+SL+++ YKI+AK ++ RLK  L
Sbjct: 491 VLTEAFKKGELPLSCRRAVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVL 550

Query: 433 AQTISDCQA 441
           A+ I   Q+
Sbjct: 551 AEVIHPDQS 559

[Close]

BLAST of Lag0032116 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 4.9e-10
Identity = 41/123 (33.33%), Postives = 65/123 (52.85%), Query Frame = 0


Query: 326 LEESFSEEEIFRAIKGLGSQKSLGPNGMTNEHFKNFWNILKPHLVEVFHEFLKNGIINRR 385
           L    S  EI   I+ L  +KS GP+G T+E ++ F   L P L+ +F    K GI+   
Sbjct: 448 LNRPISSSEIASTIQNLPKKKSPGPDGFTSEFYQTFKEELVPILLNLFQNIEKEGILPNT 507

Query: 386 TNETYVCLIPKK-KNASNIRDFRPISLVTSSYKIIAKVLAERLKKALAQTISDCQATFVH 445
             E  + LIPK  K+ +   ++RPISL+    KI+ K+L  R+++ + + I   Q  F+ 
Sbjct: 508 FYEANITLIPKPGKDPTRKENYRPISLMNIDAKILNKILTNRIQQHIKKIIHHDQVGFIP 567

Query: 446 ANQ 448
            +Q
Sbjct: 568 GSQ 570

[Close]

BLAST of Lag0032116 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 4.2e-09
Identity = 45/138 (32.61%), Postives = 71/138 (51.45%), Query Frame = 0


Query: 326 LEESFSEEEIFRAIKGLGSQKSLGPNGMTNEHFKNFWNILKPHLVEVFHEFLKNGIINRR 385
           L    S +EI   I  L ++KS GP+G + E ++ F   L P L ++FH+    G +   
Sbjct: 456 LNSPISPKEIEAVINSLPTKKSPGPDGFSAEFYQTFKEDLIPILHKLFHKIEVEGTLPNS 515

Query: 386 TNETYVCLIPK-KKNASNIRDFRPISLVTSSYKIIAKVLAERLKKALAQTISDCQATFVH 445
             E  + LIPK +K+ + I +FRPISL+    KI+ K+LA R+++ +   I   Q  F+ 
Sbjct: 516 FYEATITLIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIP 575

Query: 446 ANQS----SSSSSTIHVV 459
             Q       S + IH +
Sbjct: 576 GMQGWFNIRKSINVIHYI 593

[Close]

BLAST of Lag0032116 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.5e-06
Identity = 29/77 (37.66%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 48   PIDLLQPPDIPEKIWEDLTMDFIEGLSKANGFDTIPVVVDRLSKAAHVLSLKHPFTAKAI 107
            P   LQP    E+ WE L+MDFI  L +++G++ + VVVDR SK A ++      TA+  
Sbjct: 970  PYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQT 1029

Query: 108  AKVFVKEIVCLHGFLKE 125
            A++F + ++   G  KE
Sbjct: 1030 ARMFDQRVIAYFGNPKE 1046

[Close]

BLAST of Lag0032116 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.5e-06
Identity = 29/77 (37.66%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 48   PIDLLQPPDIPEKIWEDLTMDFIEGLSKANGFDTIPVVVDRLSKAAHVLSLKHPFTAKAI 107
            P   LQP    E+ WE L+MDFI  L +++G++ + VVVDR SK A ++      TA+  
Sbjct: 970  PYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQT 1029

Query: 108  AKVFVKEIVCLHGFLKE 125
            A++F + ++   G  KE
Sbjct: 1030 ARMFDQRVIAYFGNPKE 1046

[Close]

BLAST of Lag0032116 vs. ExPASy TrEMBL
Match: A5BY18 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_041975 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 2.3e-71
Identity = 183/597 (30.65%), Postives = 278/597 (46.57%), Query Frame = 0


Query: 182  PLLTEDYEWIAALAEVFAFNPHYTEGFAKVFGVWLVAGDFRWIE---DRLYANRPNRSMR 241
            PLL +D+ W+  L ++F+ +          F +W V GDF  I+   ++L  +    SM+
Sbjct: 928  PLLRKDF-WV-ELLDIFSLS----------FLLWCVGGDFNVIKRSSEKLGGSSLTSSMK 987

Query: 242  KFNRFVSLCELIDIPMANGRFTWIRMGERVAASRLDKMLISRDWADVFKEFKLDRLQRPT 301
             F+ F+  CEL+D P+ N  FTW  M E     RLD+ L S +W   F +   + L R T
Sbjct: 988  DFBXFIRECELLDPPLRNAPFTWSNMQESPVCKRLDRFLYSNEWEHHFPQSLQEALPRRT 1047

Query: 302  FNHFSIALSIGAMKWGPSPFRFE---------------NRASLEESFSEEEIFRAIKGLG 361
             +H+ I L     KWGP+PFRFE               N   L+  F+EEEI++AI  L 
Sbjct: 1048 SDHWPIVLETNXFKWGPTPFRFENMWLQHPSFKECFKKNAFRLDSLFTEEEIYKAIFQLD 1107

Query: 362  SQKSLGPNGMTNEHFKNFWNILKPHLVEVFHEFLKNGIINRRTNETYVCLIPKKKNASNI 421
              K+ GP+G T   F++ W+++K  LV VF EF  + IIN+ TN +++ L+PKK     I
Sbjct: 1108 RDKASGPDGFTIAVFQDCWDVIKEDLVRVFAEFHSSXIINQSTNASFIVLLPKKSMTKKI 1167

Query: 422  RDFRPISLVTSSYKIIAKVLAERLKKALAQTISDCQATFVHANQSSSSSSTIHVVVAFRS 481
             +FRPISL+TS YKIIA VL+ RL+  L +TI   Q  FV   Q                
Sbjct: 1168 SBFRPISLITSLYKIIANVLSGRLRGVLHETIHSTQGVFVQGRQ---------------- 1227

Query: 482  LSLPSVVRELRSVRRCCRRCFSLSPACSFLSSTTHRLRSAATIVNVV-ATHTVVSHRRLS 541
                                                      I++VV  T+ +V  +R  
Sbjct: 1228 ------------------------------------------ILDVVLITNEIVDKKR-- 1287

Query: 542  HLSGKEQTFYPSRGHGNESPRIEMFIDIDEELNGRDSASQTRCHLLIVEVKFQLKTHGCP 601
              SG+E+  +               ID  +  +          H+               
Sbjct: 1288 -RSGEEEVVFK--------------IDFKKAYD----------HV--------------- 1347

Query: 602  TSEMVARVLCAHRCLDGWEFLDVILNLKAFGKTWRKWIKGCLTNTNFSIIINGRPRGKIR 661
                             W+FLD +L  K F   W+KW++GCL+  +F+I++NG  +G ++
Sbjct: 1348 ----------------SWDFLDYVLEKKGFSPRWKKWMRGCLSTVSFAILVNGNAKGWVK 1396

Query: 662  ASRGLRPGDPISLFLYTIVGDAMSQLIQYCIERKILKGPSGGKNIVEVAMLQFSDDTMIF 721
            ASRGLR GDP+S FL+T+V D +S+++    ER  L+G   G+N   V+ LQF+DDT+ F
Sbjct: 1408 ASRGLRQGDPLSPFLFTLVADVLSRMLLRAEERNSLEGFRVGRNSTRVSHLQFADDTIFF 1396

Query: 722  CPNKEEIMDKWWEILRLILEGAGLSMSHAKISIIGINMNVDKIKDRADKMDGKVESF 760
                EE +     +L +    +GL ++  K +I GIN+  + +   A+ +D K   +
Sbjct: 1468 SNTSEEDLQTLKSLLLVFGHISGLKVNLDKSNIYGINLEQNHLSRLAELLDCKASGW 1396

[Close]

BLAST of Lag0032116 vs. ExPASy TrEMBL
Match: A0A438KPB4 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_18 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 5.6e-65
Identity = 181/636 (28.46%), Postives = 270/636 (42.45%), Query Frame = 0


Query: 215 WLVAGDFRWI---EDRLYANRPNRSMRKFNRFVSLCELIDIPMANGRFTWIRMGERVAAS 274
           W V GDF  I    ++L  +R   SM+ F+ F+S CELID+P+ +  FTW+ M       
Sbjct: 265 WCVGGDFNVIRRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWLNMQVNPVCK 324

Query: 275 RLDKMLISRDWADVFKEFKLDRLQRPTFNHFSIALSIGAMKWGPSPFRFE---------- 334
           RLD+ L S +W   F +     L R T +H+ I L     KWGP+PFRFE          
Sbjct: 325 RLDRFLYSNEWEQAFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFK 384

Query: 335 ----------------------------------NRAS---------------------- 394
                                             N+AS                      
Sbjct: 385 ENFGRWWREFQGNGWEGHKFMRKLQFVKAKLKVWNKASFGELKSIKEEILRYFEKLYTSP 444

Query: 395 ----------------------LEESFSEEEIFRAIKGLGSQKSLGPNGMTNEHFKNFWN 454
                                 LE  F+EEEIF+AI  +   K+ GP+G T   F++ W 
Sbjct: 445 SGESWRVEGLDWSPISGESAFRLESPFTEEEIFKAIFQMDRDKAPGPDGFTIAVFQDCWE 504

Query: 455 ILKPHLVEVFHEFLKNGIINRRTNETYVCLIPKKKNASNIRDFRPISLVTSSYKIIAKVL 514
           ++K  LV+VF EF ++GIIN+ TN +++ L+PKK  +  I DFRPISL+TS YKIIAKVL
Sbjct: 505 VIKEDLVKVFAEFHRSGIINQSTNASFIVLLPKKSMSRRISDFRPISLITSLYKIIAKVL 564

Query: 515 AERLKKALAQTISDCQATFVHANQSSSSSSTIHVVVAFRSLSLPSVVRELRSVRRCCRRC 574
           A R++  L +TI   Q  FV   Q   +                                
Sbjct: 565 AGRIRGVLHETIHSTQGAFVQGRQILDA-------------------------------- 624

Query: 575 FSLSPACSFLSSTTHRLRSAATIVNVVATHTVVSHRRLSHLSGKEQTFYPSRGHGNESPR 634
                                    V+  + +V  +R    SG+E   +           
Sbjct: 625 -------------------------VLIANEIVDEKR---RSGEEGVVFK---------- 684

Query: 635 IEMFIDIDEELNGRDSASQTRCHLLIVEVKFQLKTHGCPTSEMVARVLCAHRCLDGWEFL 694
               ID ++  +          H+                                W+FL
Sbjct: 685 ----IDFEKAYD----------HV-------------------------------SWDFL 744

Query: 695 DVILNLKAFGKTWRKWIKGCLTNTNFSIIINGRPRGKIRASRGLRPGDPISLFLYTIVGD 754
           D +L +K FG  WRKW+ GCL++ +F++++NG  +  ++ASRGLR GDP+S FL+TIV D
Sbjct: 745 DHVLEMKGFGSRWRKWMSGCLSSVSFAVLVNGNAKRWVKASRGLRQGDPLSPFLFTIVAD 785

Query: 755 AMSQLIQYCIERKILKGPSGGKNIVEVAMLQFSDDTMIFCPNKEEIMDKWWEILRLILEG 760
            +S+++    ER +L+G   G+N   V+ LQF DDT+ F  ++EE M     +L +    
Sbjct: 805 VLSRMLLKAKERNVLEGFKVGRNRTRVSHLQFVDDTIFFSSSREEDMMTLKNVLLVFGHI 785

[Close]

BLAST of Lag0032116 vs. ExPASy TrEMBL
Match: A0A4Y1RS61 (TatD related DNase OS=Prunus dulcis OX=3755 GN=Prudu_019005 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 7.3e-65
Identity = 187/647 (28.90%), Postives = 269/647 (41.58%), Query Frame = 0


Query: 204 YTEGFAKVFGV----WLVAGDF---RWIEDRLYANRPNRSMRKFNRFVSLCELIDIPMAN 263
           + E  A ++G     W + GDF   R+  ++    R  +SMR FN F+    L D  + N
Sbjct: 108 FWEELADLYGYCGDKWCLGGDFNVVRFSAEKSNEGRVTKSMRDFNDFIQETNLRDPNLLN 167

Query: 264 GRFTWIRMGERVAASRLDKMLISRDWADVFKEFKLDRLQRPTFNHFSIALSIGAMKWGPS 323
             FTW  + E     RLD+ L+S  W D F  ++   L R T +H  I L    +KWGPS
Sbjct: 168 ASFTWSNLRENAVCRRLDRFLVSGSWEDHFPHYRHKALPRITSDHCPIELDTSRVKWGPS 227

Query: 324 PFRFEN------------------------------------------------------ 383
           PFRFEN                                                      
Sbjct: 228 PFRFENMWLKHPDFKRKIKLWWDEDQTPGWEGYKFMSRLKMLKSKLKVWSKEEFGDVERD 287

Query: 384 ----------------RAS------------------------------LEESFSEEEIF 443
                           R S                              LE  F  EE+ 
Sbjct: 288 LREAEARLLIGDLAQKRKSNGAKEESNENAGWGVDGLNWCPISQTEADWLERPFELEEVQ 347

Query: 444 RAIKGLGSQKSLGPNGMTNEHFKNFWNILKPHLVEVFHEFLKNGIINRRTNETYVCLIPK 503
           +A+   G  KS GP+G +   F++ W ++K  L++V  +F ++GI+N  TNET++CLIPK
Sbjct: 348 KAVFDCGKDKSPGPDGFSMSFFQSCWEVVKGDLMKVMQDFFQSGIVNGVTNETFICLIPK 407

Query: 504 KKNASNIRDFRPISLVTSSYKIIAKVLAERLKKALAQTISDCQATFVHANQSSSSSSTIH 563
           K N+  + DFRPISLVTS YK+I+KVLA RL++ L  TIS  Q  FV   Q   +     
Sbjct: 408 KANSVKVTDFRPISLVTSLYKVISKVLASRLREVLGNTISQSQGAFVQKRQILDA----- 467

Query: 564 VVVAFRSLSLPSVVRELRSVRRCCRRCFSLSPACSFLSSTTHRLRSAATIVNVVATHTVV 623
           V+VA        VV E+R   R                                      
Sbjct: 468 VLVA------NEVVEEVRKQNR-------------------------------------- 527

Query: 624 SHRRLSHLSGKEQTFYPSRGHGNESPRIEMFIDIDEELNGRDSASQTRCHLLIVEVKFQL 683
                             +G                               L+ ++ F+ 
Sbjct: 528 ------------------KG-------------------------------LVFKIDFEK 587

Query: 684 KTHGCPTSEMVARVLCAHRCLDGWEFLDVILNLKAFGKTWRKWIKGCLTNTNFSIIINGR 743
                           A+  ++ W F+D +L  K FG  WR WI GCL + NFSI+ING+
Sbjct: 588 ----------------AYDHVE-WNFVDDVLARKGFGVKWRGWIFGCLESANFSIMINGK 639

[Close]

BLAST of Lag0032116 vs. ExPASy TrEMBL
Match: A0A438ESU6 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_362 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 3.6e-64
Identity = 174/599 (29.05%), Postives = 256/599 (42.74%), Query Frame = 0


Query: 215 WLVAGDFRWI---EDRLYANRPNRSMRKFNRFVSLCELIDIPMANGRFTWIRMGERVAAS 274
           W V GDF  I    ++L  +R   SM+ F+ F+S CELID+P+ +  FTW  M       
Sbjct: 36  WCVGGDFNVIRRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQVNPVCK 95

Query: 275 RLDKMLISRDWADVFKEFKLDRLQRPTFNHFSIALSIGAMKWGPSPFRFEN--------- 334
           RLD+ L S +W   F +     L R T +H+ I L     KWGP+PFRFEN         
Sbjct: 96  RLDRFLYSNEWEQTFPQSIQGVLPRWTSDHWPIVLETNPFKWGPTPFRFENMWLQHPSFK 155

Query: 335 ------------------------------------------------------------ 394
                                                                       
Sbjct: 156 ENFGRWWREFQGIGWEGHKFMRKLQFRSIKEEILRYFEKLYTSPSGESWRVEGLDWSPIS 215

Query: 395 ---RASLEESFSEEEIFRAIKGLGSQKSLGPNGMTNEHFKNFWNILKPHLVEVFHEFLKN 454
                 LE  F+EEEIF+AI  +   K+ GP+G T   F++ W ++K  LV+VF EF ++
Sbjct: 216 GESAVRLESPFTEEEIFKAIFQMDRDKAPGPDGFTIAVFQDCWEVIKEDLVKVFTEFHRS 275

Query: 455 GIINRRTNETYVCLIPKKKNASNIRDFRPISLVTSSYKIIAKVLAERLKKALAQTISDCQ 514
           GIIN+ TN +++ L+PKK  +  I DFRPISL+TS YKIIAKVLA R++  L +TI   Q
Sbjct: 276 GIINQSTNASFIVLLPKKSMSRRISDFRPISLITSLYKIIAKVLAGRIRGVLHETIHSTQ 335

Query: 515 ATFVHANQSSSSSSTIHVVVAFRSLSLPSVVRELRSVRRCCRRCFSLSPACSFLSSTTHR 574
             FV   Q   +                                                
Sbjct: 336 GAFVQGRQILDA------------------------------------------------ 395

Query: 575 LRSAATIVNVVATHTVVSHRRLSHLSGKEQTFYPSRGHGNESPRIEMFIDIDEELNGRDS 634
                    V+  + +V  +R    SG+E   +               ID ++  +    
Sbjct: 396 ---------VLIANEIVDEKR---RSGEEGVVFK--------------IDFEKAYD---- 455

Query: 635 ASQTRCHLLIVEVKFQLKTHGCPTSEMVARVLCAHRCLDGWEFLDVILNLKAFGKTWRKW 694
                 H+                                W+FLD +L +K FG  WRKW
Sbjct: 456 ------HV-------------------------------SWDFLDHVLEMKGFGIRWRKW 515

Query: 695 IKGCLTNTNFSIIINGRPRGKIRASRGLRPGDPISLFLYTIVGDAMSQLIQYCIERKILK 739
           ++GCL++ +F++++NG  +G ++ASRGLR GDP+S FL+TIV D +S+++    ER +L+
Sbjct: 516 MRGCLSSVSFAVLVNGNAKGWVKASRGLRQGDPLSPFLFTIVADVLSRMLLKAEERNVLE 519

[Close]

BLAST of Lag0032116 vs. ExPASy TrEMBL
Match: A0A438CEZ3 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_53 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.8e-63
Identity = 177/621 (28.50%), Postives = 265/621 (42.67%), Query Frame = 0


Query: 212 FGVWLVAGDFRWI---EDRLYANRPNRSMRKFNRFVSLCELIDIPMANGRFTWIRMGERV 271
           F +W V GDF  I    ++L  +R   SMR F+ F+S  EL+D P+ N  FTW  M E  
Sbjct: 413 FPLWCVGGDFNVIRRSSEKLGGSRLTSSMRDFDSFISESELLDPPLRNASFTWSNMQESP 472

Query: 272 AASRLDKMLISRDWADVFKEFKLDRLQRPTFNHFSIALSIGAMKWGPSPFRFEN----RA 331
              RLD+ L S +W  +F +   + L R T +H+ IAL      WGP+PFRFEN      
Sbjct: 473 VCKRLDRFLYSNEWGQLFPQGIQETLIRRTSDHWPIALDTNPFTWGPTPFRFENMWLQHP 532

Query: 332 SLEESFS----------------------------------------------------- 391
           S +E+F                                                      
Sbjct: 533 SFKENFRNWWRGFQGNGWEGHKFMRRLQFVKAKAKEWNKLSFGVLNEKKKSILKDLANLD 592

Query: 392 -------------EEEIFRAIKGLGSQKSLGPNGMTNEHFKNFWNILKPHLVEVFHEFLK 451
                        EEEI +AI  +   K+ GP+G T   F++ W+++K  LV VF EF +
Sbjct: 593 AIEQDGGLTSELLEEEISKAIFQMDRDKAPGPDGFTIAVFQDCWDVIKEDLVRVFAEFHR 652

Query: 452 NGIINRRTNETYVCLIPKKKNASNIRDFRPISLVTSSYKIIAKVLAERLKKALAQTISDC 511
           +G+IN+ TN +++ L+PKK     I DFRPISL+TS YKIIAKVL+ RL+  L +TI   
Sbjct: 653 SGVINQSTNASFIVLLPKKSTTKKISDFRPISLITSLYKIIAKVLSGRLRGVLHETIHST 712

Query: 512 QATFVHANQSSSSSSTIHVVVAFRSLSLPSVVRELRSVRRCCRRCFSLSPACSFLSSTTH 571
           Q  FV   Q   +                                               
Sbjct: 713 QGAFVQGRQIMDA----------------------------------------------- 772

Query: 572 RLRSAATIVNVVATHTVVSHRRLSHLSGKEQTFYPSRGHGNESPRIEMFIDIDEELNGRD 631
                     V+  + +V  RR    SG+E   +               ID ++  +   
Sbjct: 773 ----------VLIANEIVDERR---RSGEEGVVFK--------------IDFEKAYD--- 832

Query: 632 SASQTRCHLLIVEVKFQLKTHGCPTSEMVARVLCAHRCLDGWEFLDVILNLKAFGKTWRK 691
                  H+                                W+FLD +L  K F   WRK
Sbjct: 833 -------HV-------------------------------RWDFLDQVLEKKGFSPKWRK 892

Query: 692 WIKGCLTNTNFSIIINGRPRGKIRASRGLRPGDPISLFLYTIVGDAMSQLIQYCIERKIL 751
           W+ GCL++ ++++++NG  +G ++ASRGLR GDP+S FL+T+V D +S+++    ER +L
Sbjct: 893 WMNGCLSSVSYAVLVNGSAKGWVKASRGLRQGDPLSPFLFTLVADVLSRMLVRAEERNML 918

Query: 752 KGPSGGKNIVEVAMLQFSDDTMIFCPNKEEIMDKWWEILRLILEGAGLSMSHAKISIIGI 760
           +G   G+N   V+ LQF+DDT+ F   +EE +     +L      +GL ++  K +I GI
Sbjct: 953 EGFRVGRNRTRVSHLQFADDTIFFSNTREEDLQTLKSLLLAFGHISGLKVNLDKSNIYGI 918

[Close]

BLAST of Lag0032116 vs. TAIR 10
Match: ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )

HSP 1 Score: 54.7 bits (130), Expect = 4.0e-07
Identity = 27/68 (39.71%), Postives = 39/68 (57.35%), Query Frame = 0


Query: 632 IINGRPRGKIRASRGLRPGDPISLFLYTIVGDAMSQLIQYCIERKILKGPSGGKNIVEVA 691
           IING P+G +  SRGLR GDP+S +L+ +  + +S L +   E+  L G     N   + 
Sbjct: 13  IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72

Query: 692 MLQFSDDT 700
            L F+DDT
Sbjct: 73  HLLFADDT 80

The following BLAST results are available for this feature:

BLAST of Lag0032116 vs. NCBI nr


Match Name	E-value	Identity	Description
CAN70693.1	4.8e-71	30.65	hypothetical protein VITISV_041975 [Vitis vinifera]	[more]
RVX23043.1	1.1e-64	28.46	LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]	[more]
BBH07150.1	1.5e-64	28.90	TatD related DNase [Prunus dulcis]	[more]
RVW50737.1	7.4e-64	29.05	Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]	[more]
RVW21770.1	3.7e-63	28.50	LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]	[more]

BLAST of Lag0032116 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P14381	6.9e-12	34.11	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV...	[more]
P08548	4.9e-10	33.33	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1	[more]
P11369	4.2e-09	32.61	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE...	[more]
Q9UR07	2.5e-06	37.66	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	2.5e-06	37.66	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of Lag0032116 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A5BY18	2.3e-71	30.65	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]
A0A438KPB4	5.6e-65	28.46	LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF...	[more]
A0A4Y1RS61	7.3e-65	28.90	TatD related DNase OS=Prunus dulcis OX=3755 GN=Prudu_019005 PE=4 SV=1	[more]
A0A438ESU6	3.6e-64	29.05	Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX...	[more]
A0A438CEZ3	1.8e-63	28.50	LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF...	[more]

BLAST of Lag0032116 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG01250.1	4.0e-07	39.71	RNA-directed DNA polymerase (reverse transcriptase)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 51..127 e-value: 3.2E-9 score: 38.3
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 152..308 e-value: 1.6E-6 score: 30.1
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 214..297
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 610..737 e-value: 2.6E-13 score: 50.0
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 375..767 score: 10.823022
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 321..444 coord: 600..746
None	No IPR available	PANTHER	PTHR33116:SF38	OS01G0158850 PROTEIN	coord: 321..444 coord: 600..746
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 56..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0032116.1	Lag0032116.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding