Lag0032050 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAGAAGAATCATGGAATGTATCAGTTGGTGACCTATGCTGTCTTGGTCAACAATATCCCGAGCGAGGAATGTCGTCCGAACAAGGGAATCAGGCAAGGGGACCATCTATCCCCGTATCTTTTTCTCCTCTGTGTTGAATGCTTCTCGACTCTTTTGAATAGGGAAAAATCCTCTTTTAATCTCAAAGGTTTCAAAATTAATAATCATTTCCCTTCACTATCTCATTTATTTTTTGTAGATGACATCCTCATCTTCTTTGGAGCGTCCGAAAAAGAATGCAACACTATCAAAAGAGTTCTATCCATCTACGAGGAAGCTTCAGGCCAAGTGGTGAACCTTGCCAAATCGGCCTTTATGGTGAGCAAGAATGTGGGGATACAACTTGAAGACAATTGTGGGAGAATTCTTGGAGTTCCCTCCTCCTCAACCCTTGGAACCTTCCTTGGAATCCCTTTAATGAATTGTAAAAACAAAAAGCGGCTATTTTCCAAGGTCAAAGACAATGTTTGGAAAGTGCTCCAGACTTGGAAGGGGAAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAGGAGGTAAGGAAATTCTAATCAAAGCTATGGCTCAAGCGATCCCGATCTATACTATGAGTTGCTTAAAAATTCCAATCAATCTTTGTGACGAGATCAACAAAATCTGTGCAATTTTTTTGTGGGGATCTTCTAATGAAACAAAAGAAAATTCACTAGAAAAGTCTTTGCAAGAGTAAGGATTTGGGGGGCTTGGGCTTCAGAGACTTAACTTTCTTTAACCAAGCTATGCTGGTAAAAATGAGTTGGGGAATTATCAAGGATCCTTCCAGCCTCCTGGCGAGAATCCTTAAAGGGAGATATTTTAAAGATAAGCCTTTTCTTGAAGCCGAGTTAGGAAACAACCCCTCCCTCACTTGGAGAAGCATCGTGTGGGGGAGAGAGTTATTTCTAAGAGGTTAACAATGGAGGATTGGGAACGGAAAGTACGTCAACATTGAGCGGGACCCTTGGATTTCCAAAGAGTTCCCTAAATCTCCCTCCCTTATCAAAGAAGATTTAAAGGGTTGTAAGGTGAACAACCTTATTGATGAAAACAACAAATGGATAGAGGACAAGATAAGAGATCACTTCAACAAGGATGATGCTTCAGAAATCCTTAATATTCCACTTGGGAACCCTACCTCAAAAGATGAGATTGTGTGGAGCCCGGACAAGAAAGGCATCTTCTCGATTAAAAGTGCCTACCACTTGGCTTTACAGGCATCCCCATCCAATGAAGCTTCGGTCTCCGATCCCAACAAATTAATGAGATTCTGGAAAAAATTTTGGGCGATCAAAACCATTCCCAGAGCAAAGCTTTGTGTCTGGAGGATTCTTAATGACATTATTCCTAATGCGCCTAATCTCCAAAAGAAAGGCATTATGGTTAATTCTATGTGCCCCCTGTGCAGGAAGAAGTCGGAATCGACATCTCACACCATATGGGAATGCAAGGAATCAAGAGAATTATGGGGTGCATTGATCCCTTCTTCATTGGGTATTTTTTTCTTTATGTAGGGAGCAATGGTCGAGTAGGGACTATTGGAGCTGGATTGAGGAGAATTTGAACGAGAAAGAACGAGGGGAAGTAGAGTTTCTCATGTGGAAGATTTGGTCGATTAGGAACAACATAATCAACAACAATTCAAATTTCAAACTAGAGATAGCTTAGATGATCAACCAAATTCTCCGAAGTTTTCAAGAAGGGAAAGGTACCTCCCAGTCTTACTAGGATGCATCCTCTGCCATTCGGAGTGAGAACCACCTAAGTCAAGTGATGTGGACTCCCCCGCCTTCTGGTTGCTGGAAGTTGAACTTGGACGCCTCGTGGAACTTGGTGAACACAAGTTCGACGGGTCTCTTGTCTGCGCAGGTGTGAAATCCATAAACGAGAGATGGGTGACAGGAATTGTCAAAGGTCTGAGCCAAATAAATTTATAATCCACGACACTATAACTATTTTATAGGAATAGTGGCCGGGGTCGAACACAAGAAAGAGGATCTAGCAGATGTAGAGTTTTGTGCTTATGTAACTGATAAGGGTAAAAATATACCTATGTTGCCCTATATTTAGCTCATTTCTTGGTCAAATATTGTATGTTTTGGTCAATTTTACTATTCCCGAGCTCAAAATGTGTTAAAGTTGATAAGTTAGGGTGTTGAGATTCACTTTTGTCAAATTATGCTCATTTGTGCTTAAAAAGACTTAATTTTAAGAGAATTTGACTAAGTTTGTTGTTGTGCAGGAAAACAGAGGAAATGTTGGAATCTGCTCAGAAATGCGTCTGCATTTCTAGGAAGGCAAAATGAAATGCGACCGCATTTTTGGAAAAACTGAGGTCGTTCCGAGTCGTCCGCGGCTCGTTGTTGACGAGTCTTCTTCGCACCTAACTGGCTGTTTTGACCCCGAAACCGACTGGACTACCTTCTAG ATGGAGGAGAAGAATCATGGAATGTATCAGTTGGTGACCTATGCTGTCTTGGTCAACAATATCCCGAGCGAGGAATGTCGTCCGAACAAGGGAATCAGGCAAGGGGACCATCTATCCCCGTATCTTTTTCTCCTCTGTGTTGAATGCTTCTCGACTCTTTTGAATAGGGAAAAATCCTCTTTTAATCTCAAAGGTTTCAAAATTAATAATCATTTCCCTTCACTATCTCATTTATTTTTTGTAGATGACATCCTCATCTTCTTTGGAGCGTCCGAAAAAGAATGCAACACTATCAAAAGAGTTCTATCCATCTACGAGGAAGCTTCAGGCCAAGTGGTGAACCTTGCCAAATCGGCCTTTATGGTGAGCAAGAATGTGGGGATACAACTTGAAGACAATTGTGGGAGAATTCTTGGAGTTCCCTCCTCCTCAACCCTTGGAACCTTCCTTGGAATCCCTTTAATGAATTGTAAAAACAAAAAGCGGCTATTTTCCAAGGTCAAAGACAATGTTTGGAAAGTGCTCCAGACTTGGAAGGGGAAGTACGTCAACATTGAGCGGGACCCTTGGATTTCCAAAGAGTTCCCTAAATCTCCCTCCCTTATCAAAGAAGATTTAAAGGGTTGTAAGGTGAACAACCTTATTGATGAAAACAACAAATGGATAGAGGACAAGATAAGAGATCACTTCAACAAGGATGATGCTTCAGAAATCCTTAATATTCCACTTGGGAACCCTACCTCAAAAGATGAGATTGTGTGGAGCCCGGACAAGAAAGGCATCTTCTCGATTAAAAGTGCCTACCACTTGGCTTTACAGGCATCCCCATCCAATGAAGCTTCGGTCTCCGATCCCAACAAATTAATGAGATTCTGGAAAAAATTTTGGGCGATCAAAACCATTCCCAGAGCAAAGCTTTGTGTCTGGAGGATTCTTAATGACATTATTCCTAATGCGCCTAATCTCCAAAAGAAAGGCATTATGGTTAATTCTATGTGCCCCCTGTGCAGGAAGAAGTCGGAATCGACATCTCACACCATATGGGAATGCAAGGAATCAAGAGAATTATGGGGTGCATTGATCCCTTCTTCATTGGAACCACCTAAGTCAAGTGATGTGGACTCCCCCGCCTTCTGGTTGCTGGAAGTTGAACTTGGACGCCTCGTGGAACTTGGTGAACACAAGTTCGACGGGTCTCTTGTCTGCGCAGGAATAGTGGCCGGGGTCGAACACAAGAAAGAGGATCTAGCAGATGTAGAGTTTTGTGCTTATGTAACTGATAAGGGCAAAATGAAATGCGACCGCATTTTTGGAAAAACTGAGGTCGTTCCGAGTCGTCCGCGGCTCGTTGTTGACGAGTCTTCTTCGCACCTAACTGGCTGTTTTGACCCCGAAACCGACTGGACTACCTTCTAG ATGGAGGAGAAGAATCATGGAATGTATCAGTTGGTGACCTATGCTGTCTTGGTCAACAATATCCCGAGCGAGGAATGTCGTCCGAACAAGGGAATCAGGCAAGGGGACCATCTATCCCCGTATCTTTTTCTCCTCTGTGTTGAATGCTTCTCGACTCTTTTGAATAGGGAAAAATCCTCTTTTAATCTCAAAGGTTTCAAAATTAATAATCATTTCCCTTCACTATCTCATTTATTTTTTGTAGATGACATCCTCATCTTCTTTGGAGCGTCCGAAAAAGAATGCAACACTATCAAAAGAGTTCTATCCATCTACGAGGAAGCTTCAGGCCAAGTGGTGAACCTTGCCAAATCGGCCTTTATGGTGAGCAAGAATGTGGGGATACAACTTGAAGACAATTGTGGGAGAATTCTTGGAGTTCCCTCCTCCTCAACCCTTGGAACCTTCCTTGGAATCCCTTTAATGAATTGTAAAAACAAAAAGCGGCTATTTTCCAAGGTCAAAGACAATGTTTGGAAAGTGCTCCAGACTTGGAAGGGGAAGTACGTCAACATTGAGCGGGACCCTTGGATTTCCAAAGAGTTCCCTAAATCTCCCTCCCTTATCAAAGAAGATTTAAAGGGTTGTAAGGTGAACAACCTTATTGATGAAAACAACAAATGGATAGAGGACAAGATAAGAGATCACTTCAACAAGGATGATGCTTCAGAAATCCTTAATATTCCACTTGGGAACCCTACCTCAAAAGATGAGATTGTGTGGAGCCCGGACAAGAAAGGCATCTTCTCGATTAAAAGTGCCTACCACTTGGCTTTACAGGCATCCCCATCCAATGAAGCTTCGGTCTCCGATCCCAACAAATTAATGAGATTCTGGAAAAAATTTTGGGCGATCAAAACCATTCCCAGAGCAAAGCTTTGTGTCTGGAGGATTCTTAATGACATTATTCCTAATGCGCCTAATCTCCAAAAGAAAGGCATTATGGTTAATTCTATGTGCCCCCTGTGCAGGAAGAAGTCGGAATCGACATCTCACACCATATGGGAATGCAAGGAATCAAGAGAATTATGGGGTGCATTGATCCCTTCTTCATTGGAACCACCTAAGTCAAGTGATGTGGACTCCCCCGCCTTCTGGTTGCTGGAAGTTGAACTTGGACGCCTCGTGGAACTTGGTGAACACAAGTTCGACGGGTCTCTTGTCTGCGCAGGAATAGTGGCCGGGGTCGAACACAAGAAAGAGGATCTAGCAGATGTAGAGTTTTGTGCTTATGTAACTGATAAGGGCAAAATGAAATGCGACCGCATTTTTGGAAAAACTGAGGTCGTTCCGAGTCGTCCGCGGCTCGTTGTTGACGAGTCTTCTTCGCACCTAACTGGCTGTTTTGACCCCGAAACCGACTGGACTACCTTCTAG MEEKNHGMYQLVTYAVLVNNIPSEECRPNKGIRQGDHLSPYLFLLCVECFSTLLNREKSSFNLKGFKINNHFPSLSHLFFVDDILIFFGASEKECNTIKRVLSIYEEASGQVVNLAKSAFMVSKNVGIQLEDNCGRILGVPSSSTLGTFLGIPLMNCKNKKRLFSKVKDNVWKVLQTWKGKYVNIERDPWISKEFPKSPSLIKEDLKGCKVNNLIDENNKWIEDKIRDHFNKDDASEILNIPLGNPTSKDEIVWSPDKKGIFSIKSAYHLALQASPSNEASVSDPNKLMRFWKKFWAIKTIPRAKLCVWRILNDIIPNAPNLQKKGIMVNSMCPLCRKKSESTSHTIWECKESRELWGALIPSSLEPPKSSDVDSPAFWLLEVELGRLVELGEHKFDGSLVCAGIVAGVEHKKEDLADVEFCAYVTDKGKMKCDRIFGKTEVVPSRPRLVVDESSSHLTGCFDPETDWTTF Homology
BLAST of Lag0032050 vs. NCBI nr
Match: XP_018807386.1 (uncharacterized protein LOC108980830 [Juglans regia] >KAF5468857.1 hypothetical protein F2P56_012970 [Juglans regia]) HSP 1 Score: 227.6 bits (579), Expect = 2.2e-55 Identity = 120/384 (31.25%), Postives = 199/384 (51.82%), Query Frame = 0
BLAST of Lag0032050 vs. NCBI nr
Match: XP_023908235.1 (uncharacterized protein LOC112019924 [Quercus suber]) HSP 1 Score: 226.1 bits (575), Expect = 6.3e-55 Identity = 138/430 (32.09%), Postives = 206/430 (47.91%), Query Frame = 0
BLAST of Lag0032050 vs. NCBI nr
Match: XP_028068804.1 (uncharacterized protein LOC114271378 [Camellia sinensis]) HSP 1 Score: 223.4 bits (568), Expect = 4.1e-54 Identity = 124/363 (34.16%), Postives = 197/363 (54.27%), Query Frame = 0
BLAST of Lag0032050 vs. NCBI nr
Match: XP_035551748.1 (uncharacterized protein LOC118349904 [Juglans regia]) HSP 1 Score: 221.1 bits (562), Expect = 2.0e-53 Identity = 131/402 (32.59%), Postives = 208/402 (51.74%), Query Frame = 0
BLAST of Lag0032050 vs. NCBI nr
Match: XP_040996249.1 (uncharacterized protein LOC121242444 [Juglans microcarpa x Juglans regia]) HSP 1 Score: 217.6 bits (553), Expect = 2.3e-52 Identity = 118/390 (30.26%), Postives = 192/390 (49.23%), Query Frame = 0
BLAST of Lag0032050 vs. ExPASy Swiss-Prot
Match: P92555 (Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 4.5e-11 Identity = 29/67 (43.28%), Postives = 42/67 (62.69%), Query Frame = 0
BLAST of Lag0032050 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 5.7e-06 Identity = 47/180 (26.11%), Postives = 86/180 (47.78%), Query Frame = 0
BLAST of Lag0032050 vs. ExPASy TrEMBL
Match: A0A2I4DJQ5 (uncharacterized protein LOC108980830 OS=Juglans regia OX=51240 GN=LOC108980830 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 1.1e-55 Identity = 120/384 (31.25%), Postives = 199/384 (51.82%), Query Frame = 0
BLAST of Lag0032050 vs. ExPASy TrEMBL
Match: A0A6P9F784 (uncharacterized protein LOC118349904 OS=Juglans regia OX=51240 GN=LOC118349904 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 9.9e-54 Identity = 131/402 (32.59%), Postives = 208/402 (51.74%), Query Frame = 0
BLAST of Lag0032050 vs. ExPASy TrEMBL
Match: A0A803Q1A0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 2.7e-51 Identity = 120/389 (30.85%), Postives = 192/389 (49.36%), Query Frame = 0
BLAST of Lag0032050 vs. ExPASy TrEMBL
Match: A0A2N9HPU0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44029 PE=3 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 1.0e-50 Identity = 118/383 (30.81%), Postives = 195/383 (50.91%), Query Frame = 0
BLAST of Lag0032050 vs. ExPASy TrEMBL
Match: A0A803QB90 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 2.5e-49 Identity = 112/338 (33.14%), Postives = 181/338 (53.55%), Query Frame = 0
BLAST of Lag0032050 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 80.9 bits (198), Expect = 3.1e-15 Identity = 39/165 (23.64%), Postives = 77/165 (46.67%), Query Frame = 0
BLAST of Lag0032050 vs. TAIR 10
Match: ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) ) HSP 1 Score: 70.9 bits (172), Expect = 3.2e-12 Identity = 29/67 (43.28%), Postives = 42/67 (62.69%), Query Frame = 0
BLAST of Lag0032050 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 50.1 bits (118), Expect = 5.8e-06 Identity = 18/66 (27.27%), Postives = 39/66 (59.09%), Query Frame = 0
BLAST of Lag0032050 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 43.9 bits (102), Expect = 4.2e-04 Identity = 17/55 (30.91%), Postives = 30/55 (54.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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