Lag0032049 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0032049
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr11: 23263974 .. 23264294 (+)
RNA-Seq ExpressionLag0032049
SyntenyLag0032049
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTTCTCTGAATTGGCCCTTGGCGAATGCCATAGCTGTGGGATTTTGCTCTCGAATCAATTGGTGGTTTGTTGGGGCAGTGTGGAATTTTGCTCGCCTATCCTCCCTTTCCCTCTTCGTTATAAAAAAAGGTGGAGAAATGGAGGAGAAAAGAGAAGAAAAGAGAGAAAGAAGAGGAAAAAAAAAGAAACACTTGCCGGCGGTCGACCGGCGAACGGCGGTGGCCGCTGGCCACCGGAGTTGAAGAAGAAGAGGTTGGAGAAGAAGAAAGGGGAGAAGAGAAAGAAGAAGGAGAGGAAAGAAGGGGAAATGAATTAA

mRNA sequence

ATGGGGTTCTCTGAATTGGCCCTTGGCGAATGCCATAGCTGTGGGATTTTGCTCTCGAATCAATTGGTGGTTTGTTGGGGCAGTGTGGAATTTTGCTCGCCTATCCTCCCTTTCCCTCTTCGTTATAAAAAAAGGTGGAGAAATGGAGGAGAAAAGAGAAGAAAAGAGAGAAAGAAGAGGAAAAAAAAAGAAACACTTGCCGGCGGTCGACCGGCGAACGGCGGTGGCCGCTGGCCACCGGAGTTGAAGAAGAAGAGGTTGGAGAAGAAGAAAGGGGAGAAGAGAAAGAAGAAGGAGAGGAAAGAAGGGGAAATGAATTAA

Coding sequence (CDS)

ATGGGGTTCTCTGAATTGGCCCTTGGCGAATGCCATAGCTGTGGGATTTTGCTCTCGAATCAATTGGTGGTTTGTTGGGGCAGTGTGGAATTTTGCTCGCCTATCCTCCCTTTCCCTCTTCGTTATAAAAAAAGGTGGAGAAATGGAGGAGAAAAGAGAAGAAAAGAGAGAAAGAAGAGGAAAAAAAAAGAAACACTTGCCGGCGGTCGACCGGCGAACGGCGGTGGCCGCTGGCCACCGGAGTTGAAGAAGAAGAGGTTGGAGAAGAAGAAAGGGGAGAAGAGAAAGAAGAAGGAGAGGAAAGAAGGGGAAATGAATTAA

Protein sequence

MGFSELALGECHSCGILLSNQLVVCWGSVEFCSPILPFPLRYKKRWRNGGEKRRKERKKRKKKETLAGGRPANGGGRWPPELKKKRLEKKKGEKRKKKERKEGEMN
Homology
[Close]
BLAST of Lag0032049 vs. NCBI nr
Match: XP_022942358.1 (putative serine/threonine-protein kinase-like protein CCR3 [Cucurbita moschata])

HSP 1 Score: 56.6 bits (135), Expect = 1.5e-04
Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 2   GFSELALGECHSCGILLSNQLVVCWGSVEF 32
           GFSELALGE HSCGILLSN+ VVCWGS +F
Sbjct: 238 GFSELALGERHSCGILLSNRSVVCWGSSDF 267

[Close]
BLAST of Lag0032049 vs. NCBI nr
Match: XP_022995019.1 (putative serine/threonine-protein kinase-like protein CCR3 [Cucurbita maxima])

HSP 1 Score: 56.6 bits (135), Expect = 1.5e-04
Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 2   GFSELALGECHSCGILLSNQLVVCWGSVEF 32
           GFSELALGE HSCGILLSN+ VVCWGS +F
Sbjct: 237 GFSELALGERHSCGILLSNRSVVCWGSSDF 266

[Close]
BLAST of Lag0032049 vs. NCBI nr
Match: KAG7030672.1 (putative serine/threonine-protein kinase-like protein CCR3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 56.6 bits (135), Expect = 1.5e-04
Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 2   GFSELALGECHSCGILLSNQLVVCWGSVEF 32
           GFSELALGE HSCGILLSN+ VVCWGS +F
Sbjct: 238 GFSELALGERHSCGILLSNRSVVCWGSSDF 267

[Close]
BLAST of Lag0032049 vs. NCBI nr
Match: KAG6599999.1 (putative serine/threonine-protein kinase-like protein CCR3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 56.6 bits (135), Expect = 1.5e-04
Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 2   GFSELALGECHSCGILLSNQLVVCWGSVEF 32
           GFSELALGE HSCGILLSN+ VVCWGS +F
Sbjct: 238 GFSELALGERHSCGILLSNRSVVCWGSSDF 267

[Close]
BLAST of Lag0032049 vs. NCBI nr
Match: XP_023518722.1 (putative serine/threonine-protein kinase-like protein CCR3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 56.6 bits (135), Expect = 1.5e-04
Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 0 

Query: 2   GFSELALGECHSCGILLSNQLVVCWGSVEF 32
           GFSELALGE HSCGILLSN+ VVCWGS +F
Sbjct: 238 GFSELALGERHSCGILLSNRSVVCWGSSDF 267

The following BLAST results are available for this feature:
BLAST of Lag0032049 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022942358.11.5e-0483.33putative serine/threonine-protein kinase-like protein CCR3 [Cucurbita moschata][more]
XP_022995019.11.5e-0483.33putative serine/threonine-protein kinase-like protein CCR3 [Cucurbita maxima][more]
KAG7030672.11.5e-0483.33putative serine/threonine-protein kinase-like protein CCR3, partial [Cucurbita a... [more]
KAG6599999.11.5e-0483.33putative serine/threonine-protein kinase-like protein CCR3, partial [Cucurbita a... [more]
XP_023518722.11.5e-0483.33putative serine/threonine-protein kinase-like protein CCR3 [Cucurbita pepo subsp... [more]
BLAST of Lag0032049 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 82..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..65

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0032049.1Lag0032049.1mRNA