Lag0032039 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0032039
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUDP-glycosyltransferase 87A1-like
Locationchr11: 23075295 .. 23075831 (-)
RNA-Seq ExpressionLag0032039
SyntenyLag0032039
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCCTCTCTTTCTCTGTTCCGACCGAAAAACTAGATAACACGAGCTCGTCTTCACTCGTCGTCACCAAATCACACCAGATAACACGCCATACTCCTCAAACGTACTGCCCGCCGCTGCATACCCACGAGCTTGTCTTCACTCGCCACCAAATCGCACCCAGCCCGATTTTGCGAGATGGGTTTCTAAGTTTTTTCTCGTTCTATTTTGAAGAGCAGGGAGAAGAGGCTATCGATTACATCCCCGGAGTGTCGAAGATTCATCTTGGAGATTTACCCACTTTCTTCTTCGGCAATGGCCTCAAAGTCGTCGGATCTAGCGTGAACTTCGCCCGTTCCATTGACAAAGCCCAATTTCTCCTCTTCACCTCTGTTTACGAGCTTGAATCCTTCGTAATCGACGTTTCGAAAGCGAAGTTTTCCTTCCCAGTCTACACAATCGGCCCCAGTACCCCATATTTCGAGCTTAAAAGCAACCCAATTGCTCCAAACGACGGCGACAACTCTAAAAACTACCTTCGGTGGCTGGACTTTTAA

mRNA sequence

ATGTCCCTCTCTTTCTCTGTTCCGACCGAAAAACTAGATAACACGAGCTCGTCTTCACTCGTCGTCACCAAATCACACCAGATAACACGCCATACTCCTCAAACGTACTGCCCGCCGCTGCATACCCACGAGCTTGTCTTCACTCGCCACCAAATCGCACCCAGCCCGATTTTGCGAGATGGGTTTCTAAGTTTTTTCTCGTTCTATTTTGAAGAGCAGGGAGAAGAGGCTATCGATTACATCCCCGGAGTGTCGAAGATTCATCTTGGAGATTTACCCACTTTCTTCTTCGGCAATGGCCTCAAAGTCGTCGGATCTAGCGTGAACTTCGCCCGTTCCATTGACAAAGCCCAATTTCTCCTCTTCACCTCTGTTTACGAGCTTGAATCCTTCGTAATCGACGTTTCGAAAGCGAAGTTTTCCTTCCCAGTCTACACAATCGGCCCCAGTACCCCATATTTCGAGCTTAAAAGCAACCCAATTGCTCCAAACGACGGCGACAACTCTAAAAACTACCTTCGGTGGCTGGACTTTTAA

Coding sequence (CDS)

ATGTCCCTCTCTTTCTCTGTTCCGACCGAAAAACTAGATAACACGAGCTCGTCTTCACTCGTCGTCACCAAATCACACCAGATAACACGCCATACTCCTCAAACGTACTGCCCGCCGCTGCATACCCACGAGCTTGTCTTCACTCGCCACCAAATCGCACCCAGCCCGATTTTGCGAGATGGGTTTCTAAGTTTTTTCTCGTTCTATTTTGAAGAGCAGGGAGAAGAGGCTATCGATTACATCCCCGGAGTGTCGAAGATTCATCTTGGAGATTTACCCACTTTCTTCTTCGGCAATGGCCTCAAAGTCGTCGGATCTAGCGTGAACTTCGCCCGTTCCATTGACAAAGCCCAATTTCTCCTCTTCACCTCTGTTTACGAGCTTGAATCCTTCGTAATCGACGTTTCGAAAGCGAAGTTTTCCTTCCCAGTCTACACAATCGGCCCCAGTACCCCATATTTCGAGCTTAAAAGCAACCCAATTGCTCCAAACGACGGCGACAACTCTAAAAACTACCTTCGGTGGCTGGACTTTTAA

Protein sequence

MSLSFSVPTEKLDNTSSSSLVVTKSHQITRHTPQTYCPPLHTHELVFTRHQIAPSPILRDGFLSFFSFYFEEQGEEAIDYIPGVSKIHLGDLPTFFFGNGLKVVGSSVNFARSIDKAQFLLFTSVYELESFVIDVSKAKFSFPVYTIGPSTPYFELKSNPIAPNDGDNSKNYLRWLDF
Homology
BLAST of Lag0032039 vs. NCBI nr
Match: KAG6605397.1 (Ubiquitin-activating enzyme E1 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 146.0 bits (367), Expect = 3.2e-31
Identity = 75/144 (52.08%), Postives = 96/144 (66.67%), Query Frame = 0

Query: 46  VFTRHQIAPSPILRDGFL------------SFFSFYFEEQGEEAIDYIPGVSKIHLGDLP 105
           + TR    P+ I+ D FL              F     E+GE+ +DY PGVSKI L DLP
Sbjct: 102 LLTRLHPPPTAIVADAFLPGWYSWGITSENGDFPAELSERGEQIVDYFPGVSKIRLADLP 161

Query: 106 TFFFGNGLKVVGSSVNFARSIDKAQFLLFTSVYELESFVIDVSKAKFSFPVYTIGPSTPY 165
           +FF GNG+KVVG++V  ARS+D +QFL+ TSVYELES VID  KAKF  P+YTIGPS PY
Sbjct: 162 SFFSGNGVKVVGAAVKSARSVDNSQFLISTSVYELESSVIDALKAKFPIPIYTIGPSAPY 221

Query: 166 FELKSNPIAPNDGDNSKNYLRWLD 178
           FEL+++    ++G + KNY+RWLD
Sbjct: 222 FELETS--VKDNGGDPKNYIRWLD 243

BLAST of Lag0032039 vs. NCBI nr
Match: XP_023532234.1 (UDP-glycosyltransferase 87A2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 145.6 bits (366), Expect = 4.1e-31
Identity = 70/112 (62.50%), Postives = 86/112 (76.79%), Query Frame = 0

Query: 66  FSFYFEEQGEEAIDYIPGVSKIHLGDLPTFFFGNGLKVVGSSVNFARSIDKAQFLLFTSV 125
           F     E+GE+ +DY PGVSKI L DLP+FF GNG+KVVG +V  ARS+D +QFL+ TSV
Sbjct: 159 FPAELSERGEQIVDYFPGVSKIRLADLPSFFSGNGVKVVGGAVKSARSVDNSQFLISTSV 218

Query: 126 YELESFVIDVSKAKFSFPVYTIGPSTPYFELKSNPIAPNDGDNSKNYLRWLD 178
           YELES VID  KAKF  P+YTIGPS PYFEL+++    ++G +SKNYLRWLD
Sbjct: 219 YELESSVIDALKAKFPIPIYTIGPSAPYFELETS--VKDNGGDSKNYLRWLD 268

BLAST of Lag0032039 vs. NCBI nr
Match: XP_022948231.1 (UDP-glycosyltransferase 87A2-like [Cucurbita moschata] >XP_022948232.1 UDP-glycosyltransferase 87A2-like [Cucurbita moschata])

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-30
Identity = 69/112 (61.61%), Postives = 86/112 (76.79%), Query Frame = 0

Query: 66  FSFYFEEQGEEAIDYIPGVSKIHLGDLPTFFFGNGLKVVGSSVNFARSIDKAQFLLFTSV 125
           F     E+GE+ +DY PGVSKI L DLP+FF GNG+KVVG++V  ARS+D +QFL+ TSV
Sbjct: 159 FPAELSERGEQIVDYFPGVSKIRLADLPSFFSGNGVKVVGAAVKSARSVDNSQFLISTSV 218

Query: 126 YELESFVIDVSKAKFSFPVYTIGPSTPYFELKSNPIAPNDGDNSKNYLRWLD 178
           YELES VID  KAKF  P+YTIGPS PYFEL+++    ++G + KNYLRWLD
Sbjct: 219 YELESSVIDALKAKFPIPIYTIGPSAPYFELETS--VKDNGGDPKNYLRWLD 268

BLAST of Lag0032039 vs. NCBI nr
Match: KAG7035344.1 (UDP-glycosyltransferase 87A2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-30
Identity = 69/112 (61.61%), Postives = 86/112 (76.79%), Query Frame = 0

Query: 66  FSFYFEEQGEEAIDYIPGVSKIHLGDLPTFFFGNGLKVVGSSVNFARSIDKAQFLLFTSV 125
           F     E+GE+ +DY PGVSKI L DLP+FF GNG+KVVG++V  ARS+D +QFL+ TSV
Sbjct: 159 FPAELSERGEQIVDYFPGVSKIRLADLPSFFSGNGVKVVGAAVKSARSVDNSQFLISTSV 218

Query: 126 YELESFVIDVSKAKFSFPVYTIGPSTPYFELKSNPIAPNDGDNSKNYLRWLD 178
           YELES VID  KAKF  P+YTIGPS PYFEL+++    ++G + KNYLRWLD
Sbjct: 219 YELESSVIDALKAKFPIPIYTIGPSAPYFELETS--VKDNGGDPKNYLRWLD 268

BLAST of Lag0032039 vs. NCBI nr
Match: XP_023007351.1 (UDP-glycosyltransferase 87A2 [Cucurbita maxima])

HSP 1 Score: 142.9 bits (359), Expect = 2.7e-30
Identity = 69/112 (61.61%), Postives = 85/112 (75.89%), Query Frame = 0

Query: 66  FSFYFEEQGEEAIDYIPGVSKIHLGDLPTFFFGNGLKVVGSSVNFARSIDKAQFLLFTSV 125
           F     E+GE  +DY PGVSKI L DLP+FF GNG+KVVG++   ARS+D +QFL+ TSV
Sbjct: 159 FPAELSERGEHIVDYFPGVSKIRLADLPSFFSGNGVKVVGAAEKSARSVDNSQFLISTSV 218

Query: 126 YELESFVIDVSKAKFSFPVYTIGPSTPYFELKSNPIAPNDGDNSKNYLRWLD 178
           YELES VID  KAKF  P+YTIGPSTPYFEL+++    ++G + KNYLRWLD
Sbjct: 219 YELESSVIDALKAKFPIPIYTIGPSTPYFELETS--VKDNGGDPKNYLRWLD 268

BLAST of Lag0032039 vs. ExPASy Swiss-Prot
Match: O64733 (UDP-glycosyltransferase 87A2 OS=Arabidopsis thaliana OX=3702 GN=UGT87A2 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.4e-13
Identity = 43/108 (39.81%), Postives = 58/108 (53.70%), Query Frame = 0

Query: 70  FEEQGEEAIDYIPGVSKIHLGDLPTFFFGNGLKVVGSSVNFARSIDKAQFLLFTSVYELE 129
           FE   EE +DY+PG+S   L DLP  F G   +V  ++      +  A+ LLFT+ YELE
Sbjct: 162 FEPSEEEVVDYVPGLSPTKLRDLPPIFDGYSDRVFKTAKLCFDELPGARSLLFTTAYELE 221

Query: 130 SFVIDVSKAKFSFPVYTIGPSTPYFELKSNPIAPNDGDNSKNYLRWLD 178
              ID   +K   PVY IGP  P+ EL       ND +   NY++WL+
Sbjct: 222 HKAIDAFTSKLDIPVYAIGPLIPFEELS----VQND-NKEPNYIQWLE 264

BLAST of Lag0032039 vs. ExPASy Swiss-Prot
Match: O64732 (UDP-glycosyltransferase 87A1 OS=Arabidopsis thaliana OX=3702 GN=UGT87A1 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.9e-10
Identity = 40/107 (37.38%), Postives = 55/107 (51.40%), Query Frame = 0

Query: 71  EEQGEEAIDYIPGVSKIHLGDLPTFFFGNGLKVVGSSVNFARSIDKAQFLLFTSVYELES 130
           E + +E +DYIPG+S   L DL     G   +V          + KA++LLF S YELE 
Sbjct: 149 ESKLDEIVDYIPGLSPTRLSDL-QILHGYSHQVFNIFKKSFGELYKAKYLLFPSAYELEP 208

Query: 131 FVIDVSKAKFSFPVYTIGPSTPYFELKSNPIAPNDGDNSKNYLRWLD 178
             ID   +KF FPVY+ GP  P  EL     +  + +   +Y +WLD
Sbjct: 209 KAIDFFTSKFDFPVYSTGPLIPLEEL-----SVGNENRELDYFKWLD 249

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6605397.13.2e-3152.08Ubiquitin-activating enzyme E1 1, partial [Cucurbita argyrosperma subsp. sororia... [more]
XP_023532234.14.1e-3162.50UDP-glycosyltransferase 87A2-like [Cucurbita pepo subsp. pepo][more]
XP_022948231.11.2e-3061.61UDP-glycosyltransferase 87A2-like [Cucurbita moschata] >XP_022948232.1 UDP-glyco... [more]
KAG7035344.11.2e-3061.61UDP-glycosyltransferase 87A2, partial [Cucurbita argyrosperma subsp. argyrosperm... [more]
XP_023007351.12.7e-3061.61UDP-glycosyltransferase 87A2 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
O647332.4e-1339.81UDP-glycosyltransferase 87A2 OS=Arabidopsis thaliana OX=3702 GN=UGT87A2 PE=1 SV=... [more]
O647321.9e-1037.38UDP-glycosyltransferase 87A1 OS=Arabidopsis thaliana OX=3702 GN=UGT87A1 PE=2 SV=... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2000Glycogen Phosphorylase B;coord: 19..165
e-value: 1.3E-12
score: 49.6
NoneNo IPR availablePANTHERPTHR48047:SF80UDP-GLYCOSYLTRANSFERASE 87A1-LIKEcoord: 68..177
NoneNo IPR availablePANTHERPTHR48047GLYCOSYLTRANSFERASEcoord: 68..177
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 69..177

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0032039.1Lag0032039.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008194 UDP-glycosyltransferase activity