Lag0031927 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0031927
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase
Location	chr11: 19325517 .. 19331214 (+)
RNA-Seq Expression	Lag0031927
Synteny	Lag0031927

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGGAGCAGGATTCAAGGCTTTGCTCGTGGAGATCGTGATGGGAACGTGCGGTCTCGGTAACTTAGCGTTTAATCTTCGTTCCCCTTTACTTTAGTTGTTTCCAATGGTTGTTTTAGACTTAGATTATATCGTAATGCGTTGTATGAGTAGCTAGGTTCTTTATCTTAGGGATTGATGTAGCCCTTTGGGCACATATGAATTGATTTATGGATTCTTGCTATGATCTCATTTATGCATAATGTTTCCTTAATGCTTTCAATTTACCGGCCATGAATTGAATGATGCTTGTGTCTAAATCTAGCTCGGGAGAGGGGTTTAGCTTAGATCTCATTATGCATAACTAGGATAGTCTAGAGATCGGGAGATAAAAGATAATCTTAGAAATTGTTAAAAAGGATAGCATTGATGCCTTGCATGTTAATGAATTTAGATAGGGATATTGGATTCATTACATGTGAGAGAATTATGTGTGCTCGGGAAAGATATGTTTGAGTTAAGTATTCCAAGATTTATGAGACATAGCATGTTAATCATTCATGAATTAATTCATAATCCCAATTGTTGAAATCAACTCCCTAAGAACTTGCCATCAATTGATTTCCATATTTTTAGCCGTGTGTTAATTCTCCAATTCTTTATAACTAAAGTTGGTTCCCTAAATAAAATTTTATTAGAGTATTTGCGGTAATTAAATTGATTAGAAACTCAATCAAGAGGACGACATTCGATTTAAAAATTACTGTATTATAACTTGGCTCGTACACTTGTGGTTAAAGAGGGACAACATCTTGACGCTATCCTCTTTACCGCCCATTCTTCTTTACAAAATTTTGCAGTGTCGAGATGTTGCCAAGAATTTCCATTTCAGATTTGTGCGGCAAGGGACAGCACCGTGACGCTGTCAACAGTTTTCTATAAATACAATCTTATGTGCTACGACCAAGGGGAGCTCAATTTGAGAGATTTTAGACCTAAAACCGATTGGAGACCTTCTGTGGGAGCTGAAGCAAGGCCAAGGAGCGGGAATCACTCAAAAACGTGGGGATACGAGGACGTGCGGTTTTCAGTGGAACAAAGTTTTTCCTTATCTTTTCCTTATCTCTAGTTAGTTTTATGGTTTTTTCATGTTTAGCTTATATCGTAACGCCATGTATGAGTAGCTAGATGTGTTTCTTAGGGACTGATGTAGTCATTTATGATGATGGATTAATTATTGGGATGTATTGTGCTTTTAATTTATCTATGCAATTATGATTAAATGCTTTCAATTACTTGATTACTAGTTGAATGATTTAAGTGTTTAATCTTGCTCGAGAAAGGGGATTTAGCTTATACTTTACTAATTGCATAACTAAACTAGAAATTCTAAGATCGGGAGATTTAGAATAACTGTAGAAGTTGTTAAAAGAACTAAACTCAAAGCCTTGCATGTTAATGAATTTAGATAGAGATATCAAGTTTGTTGTATGCATGAGAATCAATTATGCTCGAGAGAGATAGTCATGATTTACGGTTTCTAGACTTGTAAATTAATTTCATCGTAAAAATTCATTCCCTTTAATGAATCCTAATCTAAATTGATGAAATCAATTCCCTAAGAATTATTTCAATTGAATTTTCCAATCTTTAATTTGCATTACCTTTGATTCAATATTTCATCTCTTTTTTATCCCTAAATAAAATTGAGCAAAAGTATTCACGGTAATTAGTTTAACTAGAAAACCAATCTAGAGGACGACATTCGATTTCATATCACTATATTATTACTTGACTTGTACACTTTTGGTTAGCAATTTCCACACCAAGCACTCGTGAATGATTGACTTACCAGTATGACCGATATCCGTGGACACATAAATATTCTACAATGAGAAGAGTGGAGTTGTGGGTCTTTTGTGGACTGACCCACAGTTAACGAATGCTGATTAACTTGGTTAATGAATTTAGCCAATTAATCTCGTATCGTTGAAGCTTCTGATCTGTAGGTCCATTAGGTCCACCTGCTAGCTCGTAAAGGGTTCTTTGGTTAATTAGTCTTGAATAGAATTTGAAGTGTACAAATTCATGAAGGAATTTTAGTTAATTGTATGTGATGCAATTAATATAATGTATGAAGATACATTATAATATAAGTTTAATTATTGAATTAAACTTTATAATATAAAATTAATTTTGGATGTGATTCAAAATTCATTAATGAGAGAATTAAATATTTGAAGGAGTTGAAATATTAAATATGAATTAGATTCATATTAATGTATAGGTTAAAATTAATATGAATGATATTCATATTAAAACTATAATATAAGAGAGAAAAATGCATTTCAATATGATTCAAATATGAAATTAATTAAATATGAGATATTTAATTAATTCATGAATTAATTAATTGGAGAATTAATTAATTTAATTTAATTTGATTAAATATGATTTAATTGAATTAATACTATAGTTAATAATTCATGTACATTTGATGCACATTACAACTATGGGTTAAAAAAAGGGAGGCACGTTTGAATATGATTCAAATGTAGAATTAATTAAATATATGATATTTAATTAATTATTGGGAATAATTAATTATTGAATTAATTGGTTGGCTTAAAATTAACTCAATTAAATATGATTTAATTGAATTGGTTAAATTAAAACTATACAATAAAGATTGATTTAATTAAATTTCAATTTAATTGAATTAATATTATATACTATATAGTTTTATGATTTAATCTAATTTAATTATTAAATTAAATAACTCCCTAGTAGTTGCTGGGGAGTTGGTTATCATTCCCAATCGTGAAGTATAGTTTCACAAGGATCACTCTAACGCTCTCTCTCCTGGAAAAACAGAGAAGATTTTCTCTCAAGAAAAGATCTCACTTTCACTCTCATTAGCTCTCAATTCTCTCATAAGAAGATTTGCAGCAAACGTTCTTGATGTACGTTGTAAATTAAAGGTGTGTTTGGTTTAACTTTTCAAGTGTTTAATTTTTTAAAAAAATCATTTTGAAATTTTTTTTGGTGTTTGGCATCCACTAAAATTGACTTATTAGAAAATGAGATTGATAAATAAACCATTTTGAGAGAAACACTTGAAACCAACTTTTTTAAAAAGAGTCTTTAAGTATACAATAACTTGTGTATCAAAACACTTATGTGGAAATGCAACCAAACATAGTTTAAATTCTATAGAATTTTTATACAAAATATTTTTTAAAAAATGCATTCTTGATAAACATTTAAATTAAAATGTATTCCAAACGGAACCTAATTCCCTTGGCAAGGCGTTTGGATCCCACAATCCAAATCTCATATCTAGAGGATAGTCGGTGATCACTATTGGTGGTGTTCTTGGGACAAAGTGAACGTGAACTTCAATTTTGAGAGCATAGTGTTGTTTTTGTTCACCAATAGGTAAGTTCACACAAACTCTAAAGTAGTTTAGAGTATTTTTTTTTAACAACATGCTTAATCGAAGATTTGATCTGTATATGGCCAATGTACTAGTATTTCTATAAAACATAATTAACAACGTGACTATCTGATACACGTTTCCGCTGCCTAAGGATTTTCATTCCTTCAATGTTGTCTTCTTTAAAAAGTGAATGAAAAAATTTAAGAAGAGGAATGAAGGTTGCTGGAACTATATTTTTTATGTTTAGGTTGGCAGTGGAAACATATGCATGATATGTTTAGGTTGTGTCTTGATACACTTGAGCGTCATACTATATTTTTATGCATGTTTTACTGATTTCTTTATGCTTATTGAATTGAGGTCGTGCACCTGAGAATTGGACCTATTATTTTGAGCAAATTAAAAAAAAAATAGCTTAGTTGTGAGATTGTTTGCTGATAACCCTCCAAAAGGGAGTTATTTAGGCCTTATTTCCATAGTGATTTGTATGTCATTTGTGTTAAATAAGGTTTCTTTTAGATGAATATTATATGTTTTAACCCATTTAGAAGAATGAATGCTTTGTAAGTTATTTTGTGCAGAAAATAATGTTGAGCGACTTGAGGGAGCAAAATCTGTGATCCAGCAAAGCAAGGAGCAAAACTGGCACGTGAGTCGCATGTGATTCATTAAATGAGGTGGCATTAGTTGAAATAATCTCGGATCTAGGAAGCTTGGAGAGCCTTCCACGTCTAAAATTTGAGCTAATTAGGGTTGACTCCACTCTATAAAAGGAAGTACTCGTCTCAAGTCCAAGACATTCCAAATTCGAGAAAGGAAAGTCTTATTCCATTCATGAAGGCTTACTTTCCATCTTTGGAAGCCGAATAAGGAGGAACGATTGGAGACTCCAAGAAGACCATCAACTACGGATTTCATCAAGGGAATTAATCTTTTCTTGTAAATTTCTTGTAGTTATGGATGCACATACTCAGATTGTAGCGTGTGTTATTTTGTACTCCATGAACTAAATTTACTTAGGTGTTGGTTAGGATCTATGTAATTGTCGTACTTCATTCTCTATGCAATTTATGTTGATTTGAGCAACTTGATTATTTGTTGTGCTTATTTCTATTTTGTACCCATCTGGCCAGCCGGTATAAATATCACCTCTTAGTTTCAGGCATGATTTTAGAGGTGTGTGGCATTTAATCACACTAGACCATTATGTGTTGGTGGACGTCAGTAACTGAGTTAGGGATAACCAGTCACCTAGTGCTTAAACGGTAGCACATCATTGAAGTTGAAACACATTTCAAAAAATCCAGAGTTCTGGGAGGATCCAGCTGATAAGACTGCAAGAGAATTTCATAATCAATATTATTGCTAGAGCATCCTTCAAAACAATTACAGAAATCCTGACCAACGCCTGTTTATGATTCGTTTGTAATTCAAGGAGTGTCTAGGGAGGCCCTTAGATTAACTTTGTTCCTGTATTCTCTTGGAGATGGAGTAAAGACGTGGTTAAATTCTTTTGCTTCAGGATCAATTAGAACTTGGAATGAGTTAGTGGAAAAATGTCTCAGTAAGTATTTTCCACCAACTAGGAATGTCAAGTTAAGGAGTGAGATAGTGGGATTTAGGCAACTCGAAGATGAAACTTTTAGTGAGGCTTGGGAGAGGTTTAAGGAACTTTTGTGTAAGTGTCCCCACCATGGTTTACCTCATTGTATCCAAATGGAAACATTTTACAATGGGTTAAATGTAGCAACCAAAAGTATGGTAGATGCTTCTACGGGAGGGGCCCTTTTGGAAAAAACCTTTAATGAATCCCATGAAATTTTACAAAGAATATCAACCAATAGTTGTTAGTGGTCAGATGTTAGAGGGTCAAATCAAAAAGTTTAGAGTGTGTTAGAAGTCGATGGTGTGTCTACCATTAGGGCTGATATTGCAATGTTAGCTAACGCTCTTAAAAATGTAACAGTAGTTAGTCATCAGCCGCCACCAGTGGTGGAGGCTACTGCAGTGGTGAACCAAGTTGCGGAGGAATCATGTGTCTATTGTGGTGAAGAGCAAAACTACGAGTATTGCCCGAATAATCCAACTTCTGTGTTTTTTGTAGGTAATCAAAGGAATAACCCTTATTCTAACTTTTATAATCCAGGTTGGCGCAACCACCCCAACTTTGCATGGGGAGGACAAGGAAGCAATCTGCAAGCACAGCAAAAGGTGAACCAGTCAAGATTTGCTAAATCGCAAGCATTGCCCGAGCAAAATAAGCATGTTTTGCCCTAG

mRNA sequence

ATGGAGAGGAGCAGGATTCAAGGCTTTGCTCGTGGAGATCGTGATGGGAACGTGCGGTCTCGGGATATTGGATTCATTACATTGTCGAGATGTTGCCAAGAATTTCCATTTCAGATTTGTGCGGCAAGGGACAGCACCGTGACGCTGTCAACAGTTTTCTATAAATACAATCTTATGTGCTACGACCAAGGGGAGCTCAATTTGAGAGATTTTAGACCTAAAACCGATTGGAGACCTTCTGTGGGAGCTGAAGCAAGGCCAAGGAGCGGGAATCACTCAAAAACGTGGGGATACGAGGACGTGCGGTTTTCAGTGGAACAAAAAAATAATGTTGAGCGACTTGAGGGAGCAAAATCTGTGATCCAGCAAAGCAAGGAGCAAAACTGGCACCCGAATAAGGAGGAACGATTGGAGACTCCAAGAAGACCATCAACTACGGATTTCATCAAGGGAATTAATCTTTTCTTGGAGGCCCTTAGATTAACTTTGTTCCTGTATTCTCTTGGAGATGGAGTAAAGACGTGGTTAAATTCTTTTGCTTCAGGATCAATTAGAACTTGGAATGAGTTAGTGGAAAAATGTCTCAGTAAGTATTTTCCACCAACTAGGAATGTCAAGTTAAGGAGTGAGATAGTGGGATTTAGGCAACTCGAAGATGAAACTTTTAGTGAGGCTTGGGAGAGGTTTAAGGAACTTTTGTTAGTTAGTCATCAGCCGCCACCAGTGGTGGAGGCTACTGCAGTGGTGAACCAAGTTGCGGAGGAATCATGTGTCTATTGTGGTGAAGAGCAAAACTACGAGTATTGCCCGAATAATCCAACTTCTGTGTTTTTTGTAGGTAATCAAAGGAATAACCCTTATTCTAACTTTTATAATCCAGGTTGGCGCAACCACCCCAACTTTGCATGGGGAGGACAAGGAAGCAATCTGCAAGCACAGCAAAAGGTGAACCAGTCAAGATTTGCTAAATCGCAAGCATTGCCCGAGCAAAATAAGCATGTTTTGCCCTAG

Coding sequence (CDS)

ATGGAGAGGAGCAGGATTCAAGGCTTTGCTCGTGGAGATCGTGATGGGAACGTGCGGTCTCGGGATATTGGATTCATTACATTGTCGAGATGTTGCCAAGAATTTCCATTTCAGATTTGTGCGGCAAGGGACAGCACCGTGACGCTGTCAACAGTTTTCTATAAATACAATCTTATGTGCTACGACCAAGGGGAGCTCAATTTGAGAGATTTTAGACCTAAAACCGATTGGAGACCTTCTGTGGGAGCTGAAGCAAGGCCAAGGAGCGGGAATCACTCAAAAACGTGGGGATACGAGGACGTGCGGTTTTCAGTGGAACAAAAAAATAATGTTGAGCGACTTGAGGGAGCAAAATCTGTGATCCAGCAAAGCAAGGAGCAAAACTGGCACCCGAATAAGGAGGAACGATTGGAGACTCCAAGAAGACCATCAACTACGGATTTCATCAAGGGAATTAATCTTTTCTTGGAGGCCCTTAGATTAACTTTGTTCCTGTATTCTCTTGGAGATGGAGTAAAGACGTGGTTAAATTCTTTTGCTTCAGGATCAATTAGAACTTGGAATGAGTTAGTGGAAAAATGTCTCAGTAAGTATTTTCCACCAACTAGGAATGTCAAGTTAAGGAGTGAGATAGTGGGATTTAGGCAACTCGAAGATGAAACTTTTAGTGAGGCTTGGGAGAGGTTTAAGGAACTTTTGTTAGTTAGTCATCAGCCGCCACCAGTGGTGGAGGCTACTGCAGTGGTGAACCAAGTTGCGGAGGAATCATGTGTCTATTGTGGTGAAGAGCAAAACTACGAGTATTGCCCGAATAATCCAACTTCTGTGTTTTTTGTAGGTAATCAAAGGAATAACCCTTATTCTAACTTTTATAATCCAGGTTGGCGCAACCACCCCAACTTTGCATGGGGAGGACAAGGAAGCAATCTGCAAGCACAGCAAAAGGTGAACCAGTCAAGATTTGCTAAATCGCAAGCATTGCCCGAGCAAAATAAGCATGTTTTGCCCTAG

Protein sequence

MERSRIQGFARGDRDGNVRSRDIGFITLSRCCQEFPFQICAARDSTVTLSTVFYKYNLMCYDQGELNLRDFRPKTDWRPSVGAEARPRSGNHSKTWGYEDVRFSVEQKNNVERLEGAKSVIQQSKEQNWHPNKEERLETPRRPSTTDFIKGINLFLEALRLTLFLYSLGDGVKTWLNSFASGSIRTWNELVEKCLSKYFPPTRNVKLRSEIVGFRQLEDETFSEAWERFKELLLVSHQPPPVVEATAVVNQVAEESCVYCGEEQNYEYCPNNPTSVFFVGNQRNNPYSNFYNPGWRNHPNFAWGGQGSNLQAQQKVNQSRFAKSQALPEQNKHVLP

Homology

[Close]

BLAST of Lag0031927 vs. NCBI nr
Match: XP_022926214.1 (uncharacterized protein LOC111433394 [Cucurbita moschata])

HSP 1 Score: 169.1 bits (427), Expect = 6.6e-38
Identity = 107/292 (36.64%), Postives = 136/292 (46.58%), Query Frame = 0


Query: 131 PNKEERLETPRRPSTTDFIKGINLFLEALRLTLFLYSLGDGVKTWLNSFASGSIRTWNEL 190
           P+++  L        +D  +   +  + +RL+LF YSL DG K+WLN+ A G+I +WN L
Sbjct: 97  PSEDPHLHLKSFLGVSDSFRFQRVDKDVIRLSLFPYSLRDGAKSWLNTLALGTIDSWNSL 156

Query: 191 VEKCLSKYFPPTRNVKLRSEIVGFRQLEDETFSEAWERFKELL-LVSHQPPP-------- 250
           VEK L KYFPPTRN + R+EIV F+Q ED+T SEAWERFKE+L    H   P        
Sbjct: 157 VEKFLIKYFPPTRNARFRNEIVVFQQFEDDTLSEAWERFKEMLRKCPHHGLPHCIQMETF 216

Query: 251 ----------VVEAT--------------------------------------------- 310
                     VV+A+                                             
Sbjct: 217 YNGLNIATKQVVDASANGAILSKTYNEAYEILERIASNNCQWADVRSNPGRKTRGVLEVD 276

Query: 311 ----------------------------------AVVNQVAEESCVYCGEEQNYEYCPNN 318
                                             AV+NQ A ESCVYCGEE  ++ CP+N
Sbjct: 277 ALSSINAQLASVTNILQNLALGQDSMIKAPVHTVAVINQTAAESCVYCGEEHTFDQCPSN 336

[Close]

BLAST of Lag0031927 vs. NCBI nr
Match: XP_030494694.1 (uncharacterized protein LOC115710474 [Cannabis sativa])

HSP 1 Score: 166.4 bits (420), Expect = 4.3e-37
Identity = 100/240 (41.67%), Postives = 123/240 (51.25%), Query Frame = 0


Query: 157 EALRLTLFLYSLGDGVKTWLNSFASGSIRTWNELVEKCLSKYFPPTRNVKLRSEIVGFRQ 216
           EALRL LF +SL D  + WLN+    S+  WN+L EK L KYFPPTRN K RSEI+ F+Q
Sbjct: 41  EALRLKLFPFSLRDRARAWLNTLPPDSVTNWNDLAEKFLRKYFPPTRNAKFRSEIMSFQQ 100

Query: 217 LEDETFSEAWERFKELL-LVSHQPPPVV-------------------------------E 276
           LEDET S+AWERFKELL    H   P+V                               E
Sbjct: 101 LEDETTSDAWERFKELLRKCPHHGIPIVSNLRLLQWSQCASRMVLDACINGAILSKSYNE 160

Query: 277 ATAVVNQVA---------------------------EESCVYCGEEQNYEYCPNNPTSVF 331
           A  ++ ++A                           E SCVYCG+   +E CP+NP SV 
Sbjct: 161 AFEILERIASNNYQWSTNRAPTSRKEVYNQYLPFKGEISCVYCGDGHTFENCPSNPASVC 220

[Close]

BLAST of Lag0031927 vs. NCBI nr
Match: XP_022960432.1 (uncharacterized protein LOC111461168 [Cucurbita moschata])

HSP 1 Score: 158.3 bits (399), Expect = 1.2e-34
Identity = 100/282 (35.46%), Postives = 126/282 (44.68%), Query Frame = 0


Query: 131 PNKEERLETPRRPSTTDFIKGINLFLEALRLTLFLYSLGDGVKTWLNSFASGSIRTWNEL 190
           P+++  L        +D  +   +  + +RL+LF YSL DG K+WLN+ A  +I +WN L
Sbjct: 88  PSEDPHLHLKSFLGVSDSFRFQGVDKDVIRLSLFPYSLRDGAKSWLNTLAPRTIDSWNSL 147

Query: 191 VEKCLSKYFPPTRNVKLRSEIVGFRQLEDETFSEAWERFKELL-LVSHQPPP-------- 250
            EK L KYFPPTRN + R+EIV F+Q EDET SEAWERFKE+L    H   P        
Sbjct: 148 AEKFLIKYFPPTRNARFRNEIVAFQQFEDETLSEAWERFKEMLRKCPHHGLPHCIQMETF 207

Query: 251 ----------VVEAT--------------------------------------------- 309
                     VV+A+                                             
Sbjct: 208 YNGLNIATKQVVDASANGAMLSKTYNEAYEILERIASNNCQWADVRSNPGKKTRGVLEVD 267

[Close]

BLAST of Lag0031927 vs. NCBI nr
Match: XP_022929949.1 (uncharacterized protein LOC111436411 [Cucurbita moschata])

HSP 1 Score: 152.9 bits (385), Expect = 4.9e-33
Identity = 95/266 (35.71%), Postives = 118/266 (44.36%), Query Frame = 0


Query: 157 EALRLTLFLYSLGDGVKTWLNSFASGSIRTWNELVEKCLSKYFPPTRNVKLRSEIVGFRQ 216
           + +RL+LF Y L DG K+WLN+ A G+I +WN L E  L KYFPPTRN + ++EIV F+Q
Sbjct: 152 DMIRLSLFPYLLRDGAKSWLNTLAPGTIDSWNSLAENFLIKYFPPTRNARFKNEIVTFQQ 211

Query: 217 LEDETFSEAWERFKELL----------------------LVSHQPPPV------------ 276
            EDET SEA ERFKE+L                      +V+ Q                
Sbjct: 212 FEDETLSEACERFKEMLRKCPHHGLPHCIQMETFYNGLNIVTKQVVDASANGAILSKTYN 271

Query: 277 ------------------------------------------------------------ 318
                                                                       
Sbjct: 272 EAYEILERIASNNCQWADVRSNPGRKTRGVLEVDALSSINAQLASVTNILQNLALGQDSM 331

[Close]

BLAST of Lag0031927 vs. NCBI nr
Match: XP_030510138.1 (uncharacterized protein LOC115724905 [Cannabis sativa])

HSP 1 Score: 152.1 bits (383), Expect = 8.3e-33
Identity = 99/286 (34.62%), Postives = 124/286 (43.36%), Query Frame = 0


Query: 131 PNKEERLETPRRPSTTDFIKGINLFLEALRLTLFLYSLGDGVKTWLNSFASGSIRTWNEL 190
           P ++  L        +D  K   +  EALRL LF +SL D  + WLN+  S S+  WN+L
Sbjct: 39  PTEDPHLHIHSFLEVSDSFKLQGVSEEALRLKLFPFSLRDRARAWLNTLPSDSVTNWNDL 98

Query: 191 VEKCLSKYFPPTRNVKLRSEIVGFRQLEDETFSEAWERFKELLL---------------- 250
            E  L KYFPPTRN K RSEI+ F+QLEDET S+AWERFKELL                 
Sbjct: 99  AENFLRKYFPPTRNAKFRSEIMSFQQLEDETTSDAWERFKELLRKCPHHGIPHCIQLETF 158

Query: 251 ------------------------------------------------VSHQPPPVVEAT 310
                                                            S +   V+E  
Sbjct: 159 YNGLNAASRMVLDASANGAILSKSYNEAFEILERIASNNYQWSTNRAPTSRKVAGVLEVD 218

Query: 311 AVVN---------------------------QVAEESCVYCGEEQNYEYCPNNPTSVFFV 322
           A+                             Q AE SCVYCG+   +E CP+NP SV +V
Sbjct: 219 ALTALTAQMASMTNILKNMNMGGSVQPAAAIQRAEISCVYCGDGHTFENCPSNPASVCYV 278

[Close]

BLAST of Lag0031927 vs. ExPASy TrEMBL
Match: A0A6J1EEI2 (uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC111433394 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 3.2e-38
Identity = 107/292 (36.64%), Postives = 136/292 (46.58%), Query Frame = 0


Query: 131 PNKEERLETPRRPSTTDFIKGINLFLEALRLTLFLYSLGDGVKTWLNSFASGSIRTWNEL 190
           P+++  L        +D  +   +  + +RL+LF YSL DG K+WLN+ A G+I +WN L
Sbjct: 97  PSEDPHLHLKSFLGVSDSFRFQRVDKDVIRLSLFPYSLRDGAKSWLNTLALGTIDSWNSL 156

Query: 191 VEKCLSKYFPPTRNVKLRSEIVGFRQLEDETFSEAWERFKELL-LVSHQPPP-------- 250
           VEK L KYFPPTRN + R+EIV F+Q ED+T SEAWERFKE+L    H   P        
Sbjct: 157 VEKFLIKYFPPTRNARFRNEIVVFQQFEDDTLSEAWERFKEMLRKCPHHGLPHCIQMETF 216

Query: 251 ----------VVEAT--------------------------------------------- 310
                     VV+A+                                             
Sbjct: 217 YNGLNIATKQVVDASANGAILSKTYNEAYEILERIASNNCQWADVRSNPGRKTRGVLEVD 276

Query: 311 ----------------------------------AVVNQVAEESCVYCGEEQNYEYCPNN 318
                                             AV+NQ A ESCVYCGEE  ++ CP+N
Sbjct: 277 ALSSINAQLASVTNILQNLALGQDSMIKAPVHTVAVINQTAAESCVYCGEEHTFDQCPSN 336

[Close]

BLAST of Lag0031927 vs. ExPASy TrEMBL
Match: A0A6J1H7E4 (uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC111461168 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 5.6e-35
Identity = 100/282 (35.46%), Postives = 126/282 (44.68%), Query Frame = 0


Query: 131 PNKEERLETPRRPSTTDFIKGINLFLEALRLTLFLYSLGDGVKTWLNSFASGSIRTWNEL 190
           P+++  L        +D  +   +  + +RL+LF YSL DG K+WLN+ A  +I +WN L
Sbjct: 88  PSEDPHLHLKSFLGVSDSFRFQGVDKDVIRLSLFPYSLRDGAKSWLNTLAPRTIDSWNSL 147

Query: 191 VEKCLSKYFPPTRNVKLRSEIVGFRQLEDETFSEAWERFKELL-LVSHQPPP-------- 250
            EK L KYFPPTRN + R+EIV F+Q EDET SEAWERFKE+L    H   P        
Sbjct: 148 AEKFLIKYFPPTRNARFRNEIVAFQQFEDETLSEAWERFKEMLRKCPHHGLPHCIQMETF 207

Query: 251 ----------VVEAT--------------------------------------------- 309
                     VV+A+                                             
Sbjct: 208 YNGLNIATKQVVDASANGAMLSKTYNEAYEILERIASNNCQWADVRSNPGKKTRGVLEVD 267

[Close]

BLAST of Lag0031927 vs. ExPASy TrEMBL
Match: A0A6J1EQ90 (uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC111436411 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.4e-33
Identity = 95/266 (35.71%), Postives = 118/266 (44.36%), Query Frame = 0


Query: 157 EALRLTLFLYSLGDGVKTWLNSFASGSIRTWNELVEKCLSKYFPPTRNVKLRSEIVGFRQ 216
           + +RL+LF Y L DG K+WLN+ A G+I +WN L E  L KYFPPTRN + ++EIV F+Q
Sbjct: 152 DMIRLSLFPYLLRDGAKSWLNTLAPGTIDSWNSLAENFLIKYFPPTRNARFKNEIVTFQQ 211

Query: 217 LEDETFSEAWERFKELL----------------------LVSHQPPPV------------ 276
            EDET SEA ERFKE+L                      +V+ Q                
Sbjct: 212 FEDETLSEACERFKEMLRKCPHHGLPHCIQMETFYNGLNIVTKQVVDASANGAILSKTYN 271

Query: 277 ------------------------------------------------------------ 318
                                                                       
Sbjct: 272 EAYEILERIASNNCQWADVRSNPGRKTRGVLEVDALSSINAQLASVTNILQNLALGQDSM 331

[Close]

BLAST of Lag0031927 vs. ExPASy TrEMBL
Match: A0A6J1G7Q6 (uncharacterized protein LOC111451598 OS=Cucurbita moschata OX=3662 GN=LOC111451598 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 8.4e-31
Identity = 96/266 (36.09%), Postives = 117/266 (43.98%), Query Frame = 0


Query: 157 EALRLTLFLYSLGDGVKTWLNSFASGSIRTWNELVEKCLSKYFPPTRNVKLRSEIVGFRQ 216
           + +RL+ F YSL DG K+WLN  A G I +WN L EK L KYFPPTR+ + R+EIV F++
Sbjct: 93  DVIRLSFFSYSLRDGAKSWLNILALGIIDSWNSLAEKFLFKYFPPTRSARFRNEIVAFQK 152

Query: 217 LEDETFSEAWERFKELL-LVSHQPPP------------------VVEATA---------- 276
            E+ET SEAWERFKE L    H   P                  VV+A+A          
Sbjct: 153 FENETLSEAWERFKETLRKCPHHGLPHCIQIETFYNGLNTATKQVVDASANGDILSKTYN 212

Query: 277 ------------------------------------------------------------ 318
                                                                       
Sbjct: 213 EAYEILERIASNNCQWVDVRSNPGKKTREVLEVDALSSINAQLASMTNILQNLAFGQGSM 272

[Close]

BLAST of Lag0031927 vs. ExPASy TrEMBL
Match: A0A6J1E1F3 (uncharacterized protein LOC111025065 OS=Momordica charantia OX=3673 GN=LOC111025065 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.0e-28
Identity = 83/223 (37.22%), Postives = 102/223 (45.74%), Query Frame = 0


Query: 150 KGINLFLEALRLTLFLYSLGDGVKTWLNSFASGSIRTWNELVEKCLSKYFPPTRNVKLRS 209
           K   L  E LRL LF YSL D  +TWL S    SI +W++L EK L KYFPP++N K RS
Sbjct: 34  KNEGLSNEVLRLKLFPYSLRDEARTWLESLPLESITSWDDLAEKFLMKYFPPSKNAKYRS 93

Query: 210 EIVGFRQLEDETFSEAWERFKELLL----------------------VSHQPPP------ 269
           EI  F+Q   E+ SE+WE FK LL                        +  P P      
Sbjct: 94  EINNFQQFAGESVSESWECFKRLLQSCPHHGIPRCIQIETYYKDLNDATRLPDPRAVQGK 153

Query: 270 ------------------------------------VVEATAVVNQVAEESCVYCGEEQN 306
                                                +  TA VNQ+   SC +C  + +
Sbjct: 154 SSKGLVESESYTTLNSNIENLTVLVMRSMMQQSSVGALTGTANVNQIQGISCSFCEGDHH 213

The following BLAST results are available for this feature:

BLAST of Lag0031927 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926214.1	6.6e-38	36.64	uncharacterized protein LOC111433394 [Cucurbita moschata]	[more]
XP_030494694.1	4.3e-37	41.67	uncharacterized protein LOC115710474 [Cannabis sativa]	[more]
XP_022960432.1	1.2e-34	35.46	uncharacterized protein LOC111461168 [Cucurbita moschata]	[more]
XP_022929949.1	4.9e-33	35.71	uncharacterized protein LOC111436411 [Cucurbita moschata]	[more]
XP_030510138.1	8.3e-33	34.62	uncharacterized protein LOC115724905 [Cannabis sativa]	[more]

BLAST of Lag0031927 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0031927 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EEI2	3.2e-38	36.64	uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC1114333...	[more]
A0A6J1H7E4	5.6e-35	35.46	uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]
A0A6J1EQ90	2.4e-33	35.71	uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC1114364...	[more]
A0A6J1G7Q6	8.4e-31	36.09	uncharacterized protein LOC111451598 OS=Cucurbita moschata OX=3662 GN=LOC1114515...	[more]
A0A6J1E1F3	3.0e-28	37.22	uncharacterized protein LOC111025065 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Lag0031927 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 164..234 e-value: 2.4E-11 score: 43.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..336
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 135..232
None	No IPR available	PANTHER	PTHR24559:SF334	SUBFAMILY NOT NAMED	coord: 135..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0031927.1	Lag0031927.1	mRNA