Lag0031876 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0031876
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr11: 17589600 .. 17590976 (-)
RNA-Seq ExpressionLag0031876
SyntenyLag0031876
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATGAAATTCTGGGGAGGCAACACGGCTCTTGCTCGACCTTGGTTGTCGGAAAGCTCGGGTCCGGCGTATCTCCGAGAGTCTGGAATGCCTTTTGGGTCGTCATTAATGGCCCAAGGCGTTATAAACCCTGCGGTATTTAAAGCTCCTTCGGTGAATTCATTATTCAATCTGACAGTTGGGTCAACTAGCAATAATGAAGGTCTGGATGACATTATTGCGCGTTGTAATCGGCGATTATCACGACAGATACTTGAAATTTTAAATGGGCCCACTTCTAAAGATGAACAGTCGTCCGTTGAAGGTGATTCAGTGGAGTCATTTCTGTCTAAGGTTGCTGACGAGGATGGGCCCCTCTCTGAGGATAGTCAACGGATCCATGATGTTGTTGTGGATTCGAAGGTTGCTGGCAAGGAACAACTGTAGCATCTTTCGCGGGGTGTGGTTCCTGTTTCAGACAGCGAGGACAGGGTGAAGGGACGATAGCGAATGGAGGTTGTTTCAATTATGCAATTGAAGGAAGGTGTATAAAGGGTCAAAGTGGAAGAAAATGGCACGTGCAGGATATGTACCTATCTCTTATCAGTTCAGGACCACAAGGAGTTCCGAAAGCAAAAGGACGAGTCGATTCTACTGTCACCTGATAATATCAAACGTCTGAAGGTGGAAGGGGAGTCTACTTTTGAGGCGGGGATTGCTGGGCAGCCCCGCCAGGGTCTATGAAGTTAATCTGTTGGAATGTTCGTGGGTTGGGGAGCCCATGGGCATTCAGAAATGTAAGCGACGAGTTATCGCACTTAAATCCCCATGTATGTTTCCTTTCCGAAACGAAATTTTCACCTTTTACATTGAATAAATTGAAAGCACGTTTGAATTATTCTGGCTATTTTGTTGTCAATAGAGTTGGGTTGAGTGGTGGTCTTTGCATGCTTTGGAAAGATGAGGTGAATGTTCGTATTAGGAATTACTCCATCCATCACATAGATGCCGAGTTAATTTGACAGGATAAACAATGGCGATTCACAGGATATATATGAGCAACCTGATTCCAGTTTGCGATCTTACACTTGGCAACTTATTCGTCACTTATATAACTTTGGTAACGAGGCGTGGGTAATTGGTGGAGATCTTAATGAGATTCTTTGGGATAATGAAAAGGCTGGAGGCCCTTCGAGGGATCATCGGTTGATGACAGATTTTAGGGAGGCATTGGACGACTATAATCTCATGGACCTGGGTTTCTCCAGTAGTTCATTTACTTGGTGCAACAGGCGAGAAAAAGATGCCCAAATGTGGCTAAGACTGGATCGGTTTATTGGAAATTCTAAATTCTGTTCGCTATTTCCATATCATATAGTTCTGCATCAAGATTAG

mRNA sequence

ATGGCGATGAAATTCTGGGGAGGCAACACGGCTCTTGCTCGACCTTGGTTGTCGGAAAGCTCGGGTCCGGCGTATCTCCGAGAGTCTGGAATGCCTTTTGGGTCGTCATTAATGGCCCAAGGCGTTATAAACCCTGCGGTATTTAAAGCTCCTTCGGTGAATTCATTATTCAATCTGACAGTTGGGTCAACTAGCAATAATGAAGGTCTGGATGACATTATTGCGCGTTGTAATCGGCGATTATCACGACAGATACTTGAAATTTTAAATGGGCCCACTTCTAAAGATGAACAGTCGTCCGTTGAAGGTGATTCAGTGGAGTCATTTCTGTCTAAGGTTGCTGACGAGGATGGGCCCCTCTCTGAGGATAGTCAACGGATCCATGATGTTGTTGTGGATTCGAAGGACCACAAGGAGTTCCGAAAGCAAAAGGACGAGTCGATTCTACTGTCACCTGATAATATCAAACGTCTGAAGGTGGAAGGGGAGTCTACTTTTGAGGCGGGGATTGCTGGGCAGCCCCGCCAGGCACGTTTGAATTATTCTGGCTATTTTGTTGTCAATAGAGTTGGGTTGAGTGGTGGTCTTTGCATGCTTTGGAAAGATGAGGATATATATGAGCAACCTGATTCCAGTTTGCGATCTTACACTTGGCAACTTATTCGTCACTTATATAACTTTGGTAACGAGGCGTGGGTAATTGGTGGAGATCTTAATGAGATTCTTTGGGATAATGAAAAGGCTGGAGGCCCTTCGAGGGATCATCGGTTGATGACAGATTTTAGGGAGGCATTGGACGACTATAATCTCATGGACCTGGGTTTCTCCAGTAGTTCATTTACTTGGTGCAACAGGCGAGAAAAAGATGCCCAAATGTGGCTAAGACTGGATCGGTTTATTGGAAATTCTAAATTCTGTTCGCTATTTCCATATCATATAGTTCTGCATCAAGATTAG

Coding sequence (CDS)

ATGGCGATGAAATTCTGGGGAGGCAACACGGCTCTTGCTCGACCTTGGTTGTCGGAAAGCTCGGGTCCGGCGTATCTCCGAGAGTCTGGAATGCCTTTTGGGTCGTCATTAATGGCCCAAGGCGTTATAAACCCTGCGGTATTTAAAGCTCCTTCGGTGAATTCATTATTCAATCTGACAGTTGGGTCAACTAGCAATAATGAAGGTCTGGATGACATTATTGCGCGTTGTAATCGGCGATTATCACGACAGATACTTGAAATTTTAAATGGGCCCACTTCTAAAGATGAACAGTCGTCCGTTGAAGGTGATTCAGTGGAGTCATTTCTGTCTAAGGTTGCTGACGAGGATGGGCCCCTCTCTGAGGATAGTCAACGGATCCATGATGTTGTTGTGGATTCGAAGGACCACAAGGAGTTCCGAAAGCAAAAGGACGAGTCGATTCTACTGTCACCTGATAATATCAAACGTCTGAAGGTGGAAGGGGAGTCTACTTTTGAGGCGGGGATTGCTGGGCAGCCCCGCCAGGCACGTTTGAATTATTCTGGCTATTTTGTTGTCAATAGAGTTGGGTTGAGTGGTGGTCTTTGCATGCTTTGGAAAGATGAGGATATATATGAGCAACCTGATTCCAGTTTGCGATCTTACACTTGGCAACTTATTCGTCACTTATATAACTTTGGTAACGAGGCGTGGGTAATTGGTGGAGATCTTAATGAGATTCTTTGGGATAATGAAAAGGCTGGAGGCCCTTCGAGGGATCATCGGTTGATGACAGATTTTAGGGAGGCATTGGACGACTATAATCTCATGGACCTGGGTTTCTCCAGTAGTTCATTTACTTGGTGCAACAGGCGAGAAAAAGATGCCCAAATGTGGCTAAGACTGGATCGGTTTATTGGAAATTCTAAATTCTGTTCGCTATTTCCATATCATATAGTTCTGCATCAAGATTAG

Protein sequence

MAMKFWGGNTALARPWLSESSGPAYLRESGMPFGSSLMAQGVINPAVFKAPSVNSLFNLTVGSTSNNEGLDDIIARCNRRLSRQILEILNGPTSKDEQSSVEGDSVESFLSKVADEDGPLSEDSQRIHDVVVDSKDHKEFRKQKDESILLSPDNIKRLKVEGESTFEAGIAGQPRQARLNYSGYFVVNRVGLSGGLCMLWKDEDIYEQPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKAGGPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLHQD
Homology
BLAST of Lag0031876 vs. NCBI nr
Match: KAG2725981.1 (hypothetical protein I3760_01G090600 [Carya illinoinensis])

HSP 1 Score: 125.6 bits (314), Expect = 7.9e-25
Identity = 61/153 (39.87%), Postives = 83/153 (54.25%), Query Frame = 0

Query: 176 QARLNYSGYFVVNRVGLSGGLCMLWKDE------------DIYEQPDSSLRSYTWQLIRH 235
           + R+ +   F V+  G  GG+ +LWK E             +Y  P++  R  TW L+R 
Sbjct: 48  RVRVGFECCFAVDCDGRKGGVALLWKKEIKNDGGLEWKFTGLYGHPETEKREETWSLLRT 107

Query: 236 LYNFGNEAWVIGGDLNEILWDNEKAGGPSRDHRLMTDFREALDDYNLMDLGFSSSSFTWC 295
           L   GN  W++ GD NE+L   EK GG  R  RLM  FR  +DD NL+DLGF    +TWC
Sbjct: 108 LRVEGNIPWLVCGDFNEVLSQEEKLGGKPRPERLMQAFRSVIDDCNLIDLGFEGQKYTWC 167

Query: 296 NRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH 317
           NRR +D  +  RLDRFI    + + FP+  V+H
Sbjct: 168 NRRYEDGVVSERLDRFIATPSWKACFPHFRVVH 200

BLAST of Lag0031876 vs. NCBI nr
Match: XP_041001573.1 (uncharacterized protein LOC121247264 [Juglans microcarpa x Juglans regia])

HSP 1 Score: 122.1 bits (305), Expect = 8.7e-24
Identity = 66/167 (39.52%), Postives = 87/167 (52.10%), Query Frame = 0

Query: 178 RLNYSGYFVVNRVGLSGGLCMLW--------------------KDEDIYE--------QP 237
           +L ++  F ++ VG SGGL ++W                    K ED++E         P
Sbjct: 50  KLGFTNCFSIDSVGRSGGLSLIWNSDLGVELKSFSRYHIDVHIKTEDLWEWRFTGLYGNP 109

Query: 238 DSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKAGGPSRDHRLMTDFREALDDYN 297
           + S R  TW LIR L +     W++GG+ NE+L  +EK GG  R    +  FRE L D N
Sbjct: 110 EVSSRCSTWNLIRTLNSIEQIPWLLGGNFNEVLHLHEKRGGRPRSITQIGVFREVLTDCN 169

Query: 298 LMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH 317
           L DLGF    FTW N RE D  +  RLDR++GNS FC LFP  +VLH
Sbjct: 170 LRDLGFRGPRFTWWNGREGDGHISKRLDRYLGNSLFCCLFPQAVVLH 216

BLAST of Lag0031876 vs. NCBI nr
Match: KAF5443558.1 (hypothetical protein F2P56_036105, partial [Juglans regia])

HSP 1 Score: 119.4 bits (298), Expect = 5.6e-23
Identity = 62/167 (37.13%), Postives = 84/167 (50.30%), Query Frame = 0

Query: 178 RLNYSGYFVVNRVGLSGGLCMLWKDE----------------------------DIYEQP 237
           RL+ +  F V+ VG SGGL +LWK +                             +Y  P
Sbjct: 50  RLHLTHCFTVDCVGRSGGLSLLWKGDLRVRVQSFSLHHIDALIQDGDGPEWRFTGVYGNP 109

Query: 238 DSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKAGGPSRDHRLMTDFREALDDYN 297
           +   R  TW L+R L +  +  W++GGD NE+L  NEK GG  R    M  FR  + D +
Sbjct: 110 EVVNRYLTWNLLRRLNSGVDGPWLVGGDFNELLHFNEKRGGRPRSENQMEAFRNVIFDCS 169

Query: 298 LMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH 317
           L DLGF    +TWCN R     +  RLDRF+GN++FC+LFP  +V H
Sbjct: 170 LRDLGFRGPKYTWCNGRAGSRAISERLDRFLGNNQFCALFPQFVVRH 216

BLAST of Lag0031876 vs. NCBI nr
Match: XP_042958111.1 (uncharacterized protein LOC122293658 [Carya illinoinensis])

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-22
Identity = 63/168 (37.50%), Postives = 80/168 (47.62%), Query Frame = 0

Query: 179 LNYSGYFVVNRVGLSGGLCMLWKDE------------------------------DIYEQ 238
           L +   FVV+  G SGGL MLWKD+                               +Y  
Sbjct: 51  LGFKNCFVVDSFGCSGGLAMLWKDDVNLHILNYSSHHIHALIRNSMFEGGVGIITGVYGH 110

Query: 239 PDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKAGGPSRDHRLMTDFREALDDY 298
           P +  R   W +++ L       W++ GD NEIL  +EK GG  R  R M  FR  L++ 
Sbjct: 111 PQTERREEVWSIVKALGRGVTSPWLVFGDFNEILNQSEKHGGNLRSERQMAGFRSVLEEK 170

Query: 299 NLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH 317
            L DLGFS   FTWCNRRE D  +  RLDRF+GN  +C  FP+  V H
Sbjct: 171 GLRDLGFSGKPFTWCNRREGDI-ICERLDRFLGNLMWCEAFPFTHVQH 217

BLAST of Lag0031876 vs. NCBI nr
Match: XP_042954578.1 (uncharacterized protein LOC122290989 [Carya illinoinensis])

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-22
Identity = 60/160 (37.50%), Postives = 85/160 (53.12%), Query Frame = 0

Query: 179 LNYSGYFVVNRVGLSGGLCMLWKDEDI-----------------------------YEQP 238
           LN+ G  V   VG SGGL ++WK +D+                             Y  P
Sbjct: 51  LNFEGCCVSEAVGRSGGLILMWKQKDLLELVNFSRYHFNVMVKDGFSSFSWLLTCFYGHP 110

Query: 239 DSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKAGGPSRDHRLMTDFREALDDYN 298
           ++SLR YTW L+   +  G E WV+ GD NEIL++NEKAGG  R   LM  F++ L++ N
Sbjct: 111 NASLRKYTWSLLSS-FKPGEEGWVVIGDFNEILYNNEKAGGNYRSEYLMRSFKKVLEEGN 170

Query: 299 LMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLF 310
           L DLG+  + FTWCN  E ++    RLDR + NS++ + +
Sbjct: 171 LFDLGWKRNKFTWCNHHEDESFTNERLDRVLANSRWKAFY 209

BLAST of Lag0031876 vs. ExPASy TrEMBL
Match: A0A2N9EK24 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7108 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.9e-22
Identity = 61/169 (36.09%), Postives = 84/169 (49.70%), Query Frame = 0

Query: 176 QARLNYSGYFVVNRVGLSGGLCMLWKDE----------------------------DIYE 235
           + RL   G F V+R G  GGL ++W D+                              Y 
Sbjct: 457 RVRLAMKGAFAVDRHGTGGGLALMWADDYDVNIQSFSHSHIDAWIIDNEGRNWRLTGFYG 516

Query: 236 QPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKAGGPSRDHRLMTDFREALDD 295
           QPD+S R  +W L+RHL+      W++ GDLNEI+ ++E  G   R    M  FR+ALDD
Sbjct: 517 QPDASKRHESWSLLRHLHGTSILPWLVMGDLNEIVANSESTGQWDRQPHFMQAFRDALDD 576

Query: 296 YNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH 317
            NL D+GF+   FTWCNRR    ++  RLDR +   ++ S+FP   V H
Sbjct: 577 CNLCDIGFTGPKFTWCNRRRGREKVRKRLDRVLCTEEWKSMFPEVQVHH 625

BLAST of Lag0031876 vs. ExPASy TrEMBL
Match: A0A2I4EB36 (uncharacterized protein LOC108987980 OS=Juglans regia OX=51240 GN=LOC108987980 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.9e-22
Identity = 62/168 (36.90%), Postives = 88/168 (52.38%), Query Frame = 0

Query: 176 QARLNYSGYFVVNRVGLSGGLCMLWK-------------------DED--------IYEQ 235
           + +L ++    V+  G SGGL +LWK                   +ED        IY Q
Sbjct: 5   RVKLKFANCLTVDASGHSGGLALLWKKDVKLEVISYSSSHIDAWVEEDSKQWFLTRIYGQ 64

Query: 236 PDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKAGGPSRDHRLMTDFREALDDY 295
           P +S R  TW LIR L    ++ W++ GD NEI    EK GG +R  + M DF + L D 
Sbjct: 65  PKASRRIETWNLIRGLPKGHSDPWLVFGDFNEIPTQREKWGGRNRLVQQMLDFYQLLSDS 124

Query: 296 NLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH 317
           NL D+GFSS  +TWCN+RE  A +  RL++F+GN  +C++F    + H
Sbjct: 125 NLKDIGFSSQRYTWCNKREDSALVSERLNKFLGNLSWCNMFGRAAIFH 172

BLAST of Lag0031876 vs. ExPASy TrEMBL
Match: A0A5B7BGF4 (Endo/exonuclease/phosphatase domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_035764 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.7e-22
Identity = 62/169 (36.69%), Postives = 85/169 (50.30%), Query Frame = 0

Query: 176 QARLNYSGYFVVNRVGLSGGLCMLWKDEDI----------------------------YE 235
           ++++ +     V+  G SGGLC+LW+D ++                            Y 
Sbjct: 48  KSQIGFRNGVFVDSDGKSGGLCLLWQDPNLIQLQSFSKSHIDVLVGENSDSQWCLIGFYG 107

Query: 236 QPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKAGGPSRDHRLMTDFREALDD 295
            PD+S RS +W L+R L    +  W+  GD NEIL D+EK G  SRD   M DFR+ LDD
Sbjct: 108 SPDASQRSISWALLRSLRQQMDIPWLCLGDFNEILCDSEKLGMRSRDECQMRDFRKVLDD 167

Query: 296 YNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH 317
               DLGF  + FTWCNRR+ +A +  RLDR I  + +C  F    V H
Sbjct: 168 CGFRDLGFYENRFTWCNRRDGEANILERLDRAIATTDWCQRFFRAKVFH 216

BLAST of Lag0031876 vs. ExPASy TrEMBL
Match: A0A2N9GTH1 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33588 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-21
Identity = 63/169 (37.28%), Postives = 82/169 (48.52%), Query Frame = 0

Query: 176 QARLNYSGYFVVNRVGLSGGLCMLWKDE----------------------------DIYE 235
           + RL  SGY  V+R GL GGL +LW                                 Y 
Sbjct: 521 RVRLGMSGYLGVDRHGLGGGLALLWNSSIAVHIQSFSHYHINADVVFENGLIWRVTSFYG 580

Query: 236 QPDSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKAGGPSRDHRLMTDFREALDD 295
            P+  LR  +W L+RHL+   N  W++ GD NEI   NE+ G   R+   M  FREAL D
Sbjct: 581 HPERGLRDDSWALLRHLWGIQNLPWLVLGDFNEITALNEQWGRIDRNLTQMAGFREALSD 640

Query: 296 YNLMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLH 317
             L DLGF  ++FTW NRR     + +RLDR + N+++ SLFP   V H
Sbjct: 641 CFLQDLGFHGAAFTWSNRRLSSELVRVRLDRCVANAEWISLFPNAWVQH 689

BLAST of Lag0031876 vs. ExPASy TrEMBL
Match: A0A5C7IIT4 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004125 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.0e-21
Identity = 60/169 (35.50%), Postives = 82/169 (48.52%), Query Frame = 0

Query: 178 RLNYSGYFVVNRVGLSGGLCMLWKDE----------------------------DIYEQP 237
           +L +    VV+R G SGGLC+LWK E                              Y  P
Sbjct: 408 KLGFDAKLVVDRKGHSGGLCLLWKAEIDVALLSYSRFHIDTVVTLRNDKVWRLTGFYGHP 467

Query: 238 DSSLRSYTWQLIRHLYNFGNEAWVIGGDLNEILWDNEKAGGPSRDHRLMTDFREALDDYN 297
           + + R + W L+R L       W +GGD NEI+  +EK GG +R    M +F+EAL+D  
Sbjct: 468 NLTQRIHGWNLLRRLAGMSPLPWFVGGDFNEIVGLSEKVGGNTRHECFMGNFQEALEDCG 527

Query: 298 LMDLGFSSSSFTWCNRREKDAQMWLRLDRFIGNSKFCSLFPYHIVLHQD 319
           L DLGF    FTW NRR+ +  +  RLDR +GN+ +  LF    + H D
Sbjct: 528 LRDLGFLGPRFTWSNRRDSEHAIQERLDRCVGNTGWLDLFSCFSIKHLD 576

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG2725981.17.9e-2539.87hypothetical protein I3760_01G090600 [Carya illinoinensis][more]
XP_041001573.18.7e-2439.52uncharacterized protein LOC121247264 [Juglans microcarpa x Juglans regia][more]
KAF5443558.15.6e-2337.13hypothetical protein F2P56_036105, partial [Juglans regia][more]
XP_042958111.11.3e-2237.50uncharacterized protein LOC122293658 [Carya illinoinensis][more]
XP_042954578.11.3e-2237.50uncharacterized protein LOC122290989 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9EK243.9e-2236.09CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7108... [more]
A0A2I4EB363.9e-2236.90uncharacterized protein LOC108987980 OS=Juglans regia OX=51240 GN=LOC108987980 P... [more]
A0A5B7BGF46.7e-2236.69Endo/exonuclease/phosphatase domain-containing protein OS=Davidia involucrata OX... [more]
A0A2N9GTH11.1e-2137.28CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3358... [more]
A0A5C7IIT42.0e-2135.50Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004125 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 180..318
e-value: 1.0E-10
score: 43.8
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 180..316
NoneNo IPR availablePANTHERPTHR33710BNAC02G09200D PROTEINcoord: 205..315
NoneNo IPR availablePANTHERPTHR33710:SF35SUBFAMILY NOT NAMEDcoord: 205..315

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0031876.1Lag0031876.1mRNA