Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCATTCACGAACGCGCTGAACAAGCTTACTTTGTCCGAGGTGGTCAAGTCTATCTCCACTTTAGCTGAAGGATACTCGAAGAAGGAAAGTCAAGATGTCGAAGAAGTTCAGTATGTGGGAAATAGAACATTCACTCAAGGAGTACCAAACTTCTACCATCCAAGTCTGCGCAATCATGAGAACTTTTCTTACTCCAACACCAAGAATGTGCTGCAACCACCACCAGGATTTGCTTCATCAAGTGTTCCAGAAAAGAAAAGCAACTTGGAGGAAATGGTGGCCCTCTTTATTAAGGAGCAGAAAGTTTTGAATGTAAATCTCCAGTCAGCGGTAAATAACCACAACACGGCTCTAAAGAATATGGAATTGCATATAGGACATATCGCTTCTGTAGTAAACGCCCTTCAGAAAGGGAAGTTTCCAAGCAACACTGAGACCAATCCTAGAGAGCAGTGCAAGATGGTGACACTCAGAAGTGGTAGAAAACTAGAGGACAACTCAGACGAAAAGATGAAGTTGAAGAAAGAAGACAAGTTGAGCAAGGATGAAGATGAACGGGCTGAGGCACAAAAAGCCTCCACAGAAAGGTCCCAAAGTCCTCCTAGCTCTTGTGATTTAAATTTTGAATGCACTAACAATTTTGCAAGTTCAAGGAAAAAGCAGGAAGAATAG
mRNA sequence
ATGGCATCATTCACGAACGCGCTGAACAAGCTTACTTTGTCCGAGGTGGTCAAGTCTATCTCCACTTTAGCTGAAGGATACTCGAAGAAGGAAAGTCAAGATGTCGAAGAAGTTCAGTATGTGGGAAATAGAACATTCACTCAAGGAGTACCAAACTTCTACCATCCAAGTCTGCGCAATCATGAGAACTTTTCTTACTCCAACACCAAGAATGTGCTGCAACCACCACCAGGATTTGCTTCATCAAGTGTTCCAGAAAAGAAAAGCAACTTGGAGGAAATGGTGGCCCTCTTTATTAAGGAGCAGAAAGTTTTGAATGTAAATCTCCAGTCAGCGGTAAATAACCACAACACGGCTCTAAAGAATATGGAATTGCATATAGGACATATCGCTTCTGTAGTAAACGCCCTTCAGAAAGGGAAGTTTCCAAGCAACACTGAGACCAATCCTAGAGAGCAGTGCAAGATGGTGACACTCAGAAGTGGTAGAAAACTAGAGGACAACTCAGACGAAAAGATGAAGTTGAAGAAAGAAGACAAGTTGAGCAAGGATGAAGATGAACGGGCTGAGGCACAAAAAGCCTCCACAGAAAGGTCCCAAAGTCCTCCTAGCTCTTGTGATTTAAATTTTGAATGCACTAACAATTTTGCAAGTTCAAGGAAAAAGCAGGAAGAATAG
Coding sequence (CDS)
ATGGCATCATTCACGAACGCGCTGAACAAGCTTACTTTGTCCGAGGTGGTCAAGTCTATCTCCACTTTAGCTGAAGGATACTCGAAGAAGGAAAGTCAAGATGTCGAAGAAGTTCAGTATGTGGGAAATAGAACATTCACTCAAGGAGTACCAAACTTCTACCATCCAAGTCTGCGCAATCATGAGAACTTTTCTTACTCCAACACCAAGAATGTGCTGCAACCACCACCAGGATTTGCTTCATCAAGTGTTCCAGAAAAGAAAAGCAACTTGGAGGAAATGGTGGCCCTCTTTATTAAGGAGCAGAAAGTTTTGAATGTAAATCTCCAGTCAGCGGTAAATAACCACAACACGGCTCTAAAGAATATGGAATTGCATATAGGACATATCGCTTCTGTAGTAAACGCCCTTCAGAAAGGGAAGTTTCCAAGCAACACTGAGACCAATCCTAGAGAGCAGTGCAAGATGGTGACACTCAGAAGTGGTAGAAAACTAGAGGACAACTCAGACGAAAAGATGAAGTTGAAGAAAGAAGACAAGTTGAGCAAGGATGAAGATGAACGGGCTGAGGCACAAAAAGCCTCCACAGAAAGGTCCCAAAGTCCTCCTAGCTCTTGTGATTTAAATTTTGAATGCACTAACAATTTTGCAAGTTCAAGGAAAAAGCAGGAAGAATAG
Protein sequence
MASFTNALNKLTLSEVVKSISTLAEGYSKKESQDVEEVQYVGNRTFTQGVPNFYHPSLRNHENFSYSNTKNVLQPPPGFASSSVPEKKSNLEEMVALFIKEQKVLNVNLQSAVNNHNTALKNMELHIGHIASVVNALQKGKFPSNTETNPREQCKMVTLRSGRKLEDNSDEKMKLKKEDKLSKDEDERAEAQKASTERSQSPPSSCDLNFECTNNFASSRKKQEE
Homology
BLAST of Lag0031824 vs. NCBI nr
Match:
XP_023889786.1 (uncharacterized protein LOC112001854 [Quercus suber])
HSP 1 Score: 138.7 bits (348), Expect = 6.4e-29
Identity = 72/147 (48.98%), Postives = 99/147 (67.35%), Query Frame = 0
Query: 36 EEVQYVGNRTFT---QGVPNFYHPSLRNHENFSYSNTKNVLQPPPGFASSSVPEKKSNLE 95
E VQY+ N+ +PN+YHP LRNHENFSY NTKNVLQPPPGF S EKK +LE
Sbjct: 166 EHVQYINNQNNNYRGNPMPNYYHPGLRNHENFSYGNTKNVLQPPPGF-DSQPSEKKMSLE 225
Query: 96 EMVALFIKEQKV-------LNVNLQSAVNNHNTALKNMELHIGHIASVVNALQKGKFPSN 155
+ + F++E K L N+++ +N +KN+E+ IG +A+ +NA Q+G FPSN
Sbjct: 226 DAMVSFVEETKARFKKSDSLLDNIETHCSNMGATMKNLEVQIGQLATTINAKQRGTFPSN 285
Query: 156 TETNPREQCKMVTLRSGRKLEDNSDEK 173
TE NP+EQCK +TLRSGR++E + ++
Sbjct: 286 TEVNPKEQCKAITLRSGREIETSPSKE 311
BLAST of Lag0031824 vs. NCBI nr
Match:
XP_030923419.1 (uncharacterized protein LOC115950351 [Quercus lobata])
HSP 1 Score: 137.5 bits (345), Expect = 1.4e-28
Identity = 69/140 (49.29%), Postives = 97/140 (69.29%), Query Frame = 0
Query: 37 EVQYVGNRTFT---QGVPNFYHPSLRNHENFSYSNTKNVLQPPPGFASSSVPEKKSNLEE 96
+VQY+ N+ + +PN+YHP LRNHENFSY NTKNVLQPPPGF S EKK +LE+
Sbjct: 214 QVQYINNQNYNYRGNPMPNYYHPGLRNHENFSYGNTKNVLQPPPGF-DSQPSEKKMSLED 273
Query: 97 MVALFIKEQKVLNV-------NLQSAVNNHNTALKNMELHIGHIASVVNALQKGKFPSNT 156
+ F++E K N+++ +N +KN+E+ IG +A+ +NA Q+G FPSNT
Sbjct: 274 AMISFVEETKARFKKSDSRLDNIETHCSNMGATMKNLEVQIGQLATTMNAQQRGTFPSNT 333
Query: 157 ETNPREQCKMVTLRSGRKLE 167
+ NP+EQCK++TLRSGR++E
Sbjct: 334 KVNPKEQCKVITLRSGREIE 352
BLAST of Lag0031824 vs. NCBI nr
Match:
XP_023929660.1 (uncharacterized protein LOC112040975 [Quercus suber])
HSP 1 Score: 136.0 bits (341), Expect = 4.1e-28
Identity = 86/219 (39.27%), Postives = 125/219 (57.08%), Query Frame = 0
Query: 1 MASFTNALNKLTLSEVVKSISTLAEGYSKKESQDV--EEVQYVGNRTFT---QGVPNFYH 60
+AS ++ ++ LT + +S+ +A + E VQY+ NR + +PN+YH
Sbjct: 244 VASLSHQVSALTTQRIPQSVEYVAASSMTVPMNEASQEHVQYINNRNYNYHGNPMPNYYH 303
Query: 61 PSLRNHENFSYSNTKNVLQPPPGFASSSVPEKKSNLEEMVALFIKEQKV-------LNVN 120
P LRNHENFSY NTKNVLQPPPGF S EKK +LE+ + F++E K N
Sbjct: 304 PGLRNHENFSYGNTKNVLQPPPGF-DSQPSEKKMSLEDAMVSFVEETKARFRKSDSQLDN 363
Query: 121 LQSAVNNHNTALKNMELHIGHIASVVNALQKGKFPSNTETNPREQCKMVTLRSGRKLE-- 180
+++ +N +KN+E+ IG +A+ +NA Q+G FPSNTE NP+EQCK +TLRSGR++E
Sbjct: 364 IETHCSNMGAIMKNLEVQIGQLATTINAQQRGTFPSNTEVNPKEQCKAITLRSGREIERS 423
Query: 181 -DNSDEKMKLKKEDKLSKDEDERAEAQKASTERSQSPPS 205
E + SK++ E E + + PPS
Sbjct: 424 PSKETETTPTVPNNGQSKNKVEEEEIVHDTLRETDMPPS 461
BLAST of Lag0031824 vs. NCBI nr
Match:
XP_023874613.1 (uncharacterized protein LOC111987139 [Quercus suber])
HSP 1 Score: 136.0 bits (341), Expect = 4.1e-28
Identity = 85/219 (38.81%), Postives = 125/219 (57.08%), Query Frame = 0
Query: 1 MASFTNALNKLTLSEVVKSISTLAEGYSKKESQDV--EEVQYVGNRTFT---QGVPNFYH 60
+AS ++ ++ LT + + +A + E+VQY+ NR + +PN+YH
Sbjct: 244 VASLSHQVSALTTQRIPQGAEYVAASSMTVPMNEASQEQVQYINNRNYNYRGNPMPNYYH 303
Query: 61 PSLRNHENFSYSNTKNVLQPPPGFASSSVPEKKSNLEEMVALFIKEQKVLNV-------N 120
P LRNHENFSY NTKNVLQPPPGF S EKK +LE+ + F++E K N
Sbjct: 304 PGLRNHENFSYGNTKNVLQPPPGF-DSQPSEKKMSLEDAMVSFVEETKATFKKSDSQLDN 363
Query: 121 LQSAVNNHNTALKNMELHIGHIASVVNALQKGKFPSNTETNPREQCKMVTLRSGRKLE-- 180
+++ +N +KN+E+ IG +A+ +NA Q+G FPSNTE NP+EQCK +TLRSGR++E
Sbjct: 364 IETHCSNMGATMKNLEVQIGQLATTINAQQRGTFPSNTEVNPKEQCKAITLRSGREIERS 423
Query: 181 -DNSDEKMKLKKEDKLSKDEDERAEAQKASTERSQSPPS 205
E + SK++ E E + + + PPS
Sbjct: 424 PSKETETTPTAPNNGQSKNKVEEEEIVEDTLRETDMPPS 461
BLAST of Lag0031824 vs. NCBI nr
Match:
XP_023903214.1 (uncharacterized protein LOC112015077 [Quercus suber])
HSP 1 Score: 135.6 bits (340), Expect = 5.4e-28
Identity = 85/219 (38.81%), Postives = 126/219 (57.53%), Query Frame = 0
Query: 1 MASFTNALNKLTLSEVVKSISTLAEGYSKKESQDV--EEVQYVGNRTFT---QGVPNFYH 60
+AS ++ ++ L+ + +S +A + E+VQY+ NR + +PN+YH
Sbjct: 244 VASLSHQVSALSTQRIPQSAEYVAASSMTVPMNEASQEQVQYINNRNYNYRGNPMPNYYH 303
Query: 61 PSLRNHENFSYSNTKNVLQPPPGFASSSVPEKKSNLEEMVALFIKEQKVLNV-------N 120
P LRNHENFSY NTKNVLQPPPGF S EKK +LE+ + F++E K N
Sbjct: 304 PGLRNHENFSYGNTKNVLQPPPGF-DSQPSEKKMSLEDAMVSFVEETKARFKKSDSRLDN 363
Query: 121 LQSAVNNHNTALKNMELHIGHIASVVNALQKGKFPSNTETNPREQCKMVTLRSGRKLE-- 180
+++ +N +KN+E+ IG +A+ +NA Q+G FPSNTE NP+EQCK +TLRSGR++E
Sbjct: 364 IETHCSNMGATMKNLEVQIGQLATTINAQQRGTFPSNTEVNPKEQCKAITLRSGREIETS 423
Query: 181 -DNSDEKMKLKKEDKLSKDEDERAEAQKASTERSQSPPS 205
E + SK++ E E + + + PPS
Sbjct: 424 PSKETETTPTAPNNGQSKNKVEEEEIVEDTLRETDMPPS 461
BLAST of Lag0031824 vs. ExPASy TrEMBL
Match:
A0A6P9DWY0 (uncharacterized protein LOC118344026 OS=Juglans regia OX=51240 GN=LOC118344026 PE=4 SV=1)
HSP 1 Score: 134.8 bits (338), Expect = 4.4e-28
Identity = 77/178 (43.26%), Postives = 110/178 (61.80%), Query Frame = 0
Query: 1 MASFTNALNKLTLSEVVKSISTLAEGYSKKESQDV--EEVQYVGNRTFT---QGVPNFYH 60
+AS ++ ++ LT + +S +A S + E+VQY+ NR + +PN+YH
Sbjct: 91 VASLSHQISALTTQRIPQSAEYVAATSMTVPSNEASQEQVQYINNRNYNYRGNPMPNYYH 150
Query: 61 PSLRNHENFSYSNTKNVLQPPPGFASSSVPEKKSNLEEMVALFIKEQKVLNV-------N 120
LRNHEN SY NTKNVLQP PGF S EKK +LE+ + F++E N
Sbjct: 151 LGLRNHENLSYKNTKNVLQPHPGF-DSQPSEKKISLEDAMVSFVEETNTRFKKTDSRLDN 210
Query: 121 LQSAVNNHNTALKNMELHIGHIASVVNALQKGKFPSNTETNPREQCKMVTLRSGRKLE 167
+++ +N A+KN+E+ IG +A+ +NA Q+G FPSNTE NPREQCK +TLRSGR+L+
Sbjct: 211 IETHCSNMGAAIKNIEVQIGQLATTINAQQRGTFPSNTEVNPREQCKAITLRSGRELD 267
BLAST of Lag0031824 vs. ExPASy TrEMBL
Match:
A0A2I4G4Q3 (uncharacterized protein LOC109004712 OS=Juglans regia OX=51240 GN=LOC109004712 PE=4 SV=1)
HSP 1 Score: 127.9 bits (320), Expect = 5.4e-26
Identity = 83/192 (43.23%), Postives = 116/192 (60.42%), Query Frame = 0
Query: 1 MASFTNALNKLTLSEVVKS----ISTLAEGYSKKESQDVEEVQYVGNRTFT---QGVPNF 60
+A+ ++ ++ LT + +S ++T S + SQ E+VQY+ NR + +PN+
Sbjct: 198 VATLSHQISALTTQRIPQSAEYVVATSMTVLSNEVSQ--EQVQYINNRNYNYCGNPMPNY 257
Query: 61 YHPSLRNHENFSYSNTKNVL--QPPPGFASSSVPEKKSNLEEMVALFIKEQKVLNVNLQS 120
YHP +NHEN SY NTKNVL QPPPGF S S EKK +LE+ + FI+E S
Sbjct: 258 YHPGFQNHENLSYENTKNVLQPQPPPGFDSQS-SEKKMSLEDAMISFIQETNARFKKTDS 317
Query: 121 AVNNHNT--------ALKNMELHIGHIASVVNALQKGKFPSNTETNPREQCKMVTLRSGR 175
++N T KN+E+ IG +A+ +NA Q+G FPSNTE NPREQCK + LRSGR
Sbjct: 318 RLDNIETHCSNMGAAIKKNIEVQIGQLATTINAQQRGTFPSNTEVNPREQCKAIILRSGR 377
BLAST of Lag0031824 vs. ExPASy TrEMBL
Match:
A0A2P5BPI6 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_313500 PE=4 SV=1)
HSP 1 Score: 122.5 bits (306), Expect = 2.3e-24
Identity = 61/125 (48.80%), Postives = 91/125 (72.80%), Query Frame = 0
Query: 50 VPNFYHPSLRNHENFSYSNTKNVLQPPPGFASSSVPEKKSNLEEMVALFI--------KE 109
+P Y+P LRNHENFSY NT+NVLQPPPGF + V EKKS+LE++++ FI K+
Sbjct: 5 LPTHYYPGLRNHENFSYGNTRNVLQPPPGF-NPPVSEKKSSLEDLLSTFIVETRRKFNKD 64
Query: 110 QKVLNVNLQSAVNNHNTALKNMELHIGHIASVVNALQKGKFPSNTETNPREQCKMVTLRS 167
+ L+ N+++ NN N +K++E+ IG +A+ + Q GKFPS+TETNP++ CK +TLR+
Sbjct: 65 EARLD-NIETHCNNMNATMKSLEVQIGQLANSIKGQQSGKFPSDTETNPKDHCKAITLRN 124
BLAST of Lag0031824 vs. ExPASy TrEMBL
Match:
A0A6P9F5T6 (uncharacterized protein LOC108989976 OS=Juglans regia OX=51240 GN=LOC108989976 PE=4 SV=1)
HSP 1 Score: 116.7 bits (291), Expect = 1.3e-22
Identity = 79/195 (40.51%), Postives = 114/195 (58.46%), Query Frame = 0
Query: 5 TNALNKLTLSEVVKSISTLAEGYSKKESQDVEEVQYVGNRTFT---QGVPNFYHPSLRNH 64
+ L T+ E V + S S +ESQ E+VQY+ N + +PN+Y+P L+NH
Sbjct: 40 SGTLMSKTVEEYVAATSMTIP--SNEESQ--EQVQYINNWNYNYCGNPMPNYYYPGLQNH 99
Query: 65 ENFSYSNTKNVL--QPPPGFASSSVPEKKSNLEEMVALFIKEQKVLNV-------NLQSA 124
EN SY NTKNVL QPPPGF S S EKK +LE+ + F++E V N+++
Sbjct: 100 ENLSYRNTKNVLQPQPPPGFDSQS-SEKKISLEDAMVSFVQETNVRFKKTDSRLDNIETH 159
Query: 125 VNNHNTALKNMELHIGHIASVVNALQKGKFPSNTETNPREQCKMVTLRSGRKL------E 182
+N +KN+E+ IG +A +N+ Q+G FPSN E NP EQ K +TLRSGR++ E
Sbjct: 160 CSNMGATIKNLEVQIGQLAKTINSQQRGTFPSNIEMNPNEQYKAITLRSGREIERSPSKE 219
BLAST of Lag0031824 vs. ExPASy TrEMBL
Match:
A0A2I4FP56 (uncharacterized protein LOC109000837 OS=Juglans regia OX=51240 GN=LOC109000837 PE=4 SV=1)
HSP 1 Score: 114.0 bits (284), Expect = 8.1e-22
Identity = 76/214 (35.51%), Postives = 118/214 (55.14%), Query Frame = 0
Query: 1 MASFTNALNKLTLSEVVKSISTLAEGYSKKESQDV--EEVQYVGNRTFT---QGVPNFYH 60
+A+ ++ ++ L + +S +A S + E+VQY+ N+ + +PN +H
Sbjct: 126 VATLSHQISALITQRIPQSAEYVAATSMTIPSNEASQEQVQYINNQNYNYRGNPMPNHFH 185
Query: 61 PSLRNHENFSYSNTKNVLQP-PPGFASSSVPEKKSNLEEMVALFI-------KEQKVLNV 120
P LRNHEN SY NTKNVLQP PP +S +KK +LE + F+ KE
Sbjct: 186 PGLRNHENLSYGNTKNVLQPQPPSGFNSQSSKKKMSLENAMISFVEETNAKFKETDSQLD 245
Query: 121 NLQSAVNNHNTALKNMELHIGHIASVVNALQKGKFPSNTETNPREQCKMVTLRSGRKLE- 180
N+++ +N A+KN+E+ IG +A+ +NA Q+ FPSNTE NP EQ K +TLRSGR++E
Sbjct: 246 NIETHCSNMRAAIKNIEVQIGQLATTINAQQRETFPSNTEVNPNEQSKAITLRSGREIEK 305
Query: 181 -------------DNSDEKMKLKKEDKLSKDEDE 188
+N K K+++ED ++ D+
Sbjct: 306 PPSKETNSTPTAANNGQSKNKVEEEDDTPRESDK 339
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6P9DWY0 | 4.4e-28 | 43.26 | uncharacterized protein LOC118344026 OS=Juglans regia OX=51240 GN=LOC118344026 P... | [more] |
| A0A2I4G4Q3 | 5.4e-26 | 43.23 | uncharacterized protein LOC109004712 OS=Juglans regia OX=51240 GN=LOC109004712 P... | [more] |
| A0A2P5BPI6 | 2.3e-24 | 48.80 | Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_313500 PE=4 SV... | [more] |
| A0A6P9F5T6 | 1.3e-22 | 40.51 | uncharacterized protein LOC108989976 OS=Juglans regia OX=51240 GN=LOC108989976 P... | [more] |
| A0A2I4FP56 | 8.1e-22 | 35.51 | uncharacterized protein LOC109000837 OS=Juglans regia OX=51240 GN=LOC109000837 P... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
