Lag0031805 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0031805
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr11: 15116121 .. 15117485 (+)
RNA-Seq Expression	Lag0031805
Synteny	Lag0031805

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAATCTCACTCTCTCCCTTACTCTCCCTCTACTACCACTTACACAGCTCCTCTTCAATTAATTGTGTCTGACTTGTGGGGTCCTACATATATTCCTTCAGCAAATGGTTATCGGTATTATATTAGCTTTGTGGATGTTTTTAGTCGGTACACTTGGATATATTTTTTAAAATCCAAGTCCGATGCCTTTGCTGCTTTTGTTAAATTTAAAACCCACATTGAAAAGCTTCTCAATTTGCCTATTCTTCAATTTCAATCTGATAATGGTGGAGAGTTTCTGGCTTTCAAACCTTATTTAGATTCTCATGGCATTTCACATCGATTTTCTTGTCCTCACACTTCACAACAGAACGGGATTGCTGAGTGCAAGCACAGGCACATTGTCGATACTGGCCTAGCCTTGCTATCTCACTCCTCCATGCCTTTAAAATTCTGGGATGAAGCGTTCTCAACCGCTGTATTTTTTATAAATAGGCTGCCCTCTGAAGTTCTTCATGGCAAGAGTCCCTTGGATATCATCTTCTGCACTCACCCTGATTATTCTTTTCTTAAAACCTTCGGATGTCAGTGCTTTCCTTGTTTACGACCATATAAAACTCATAAGCTTGACTATAGGTCTGAACCTTGTGTTTTCATAGGATACAGTTCTTCTCATAAGGGTTATCGTTGCTTATCTGCTAATGGTAGGGTCTATGTTTCAAGGAATGTTTTATTTAATGAGTCCATTTTTCCCTTTTCCCAATTTCCATTGCAGTCTATCACCAAGTCTCCTCCCTCTGTCTCTTTACCTACTCTTGGGTCTATTTTACCTGTCTCTTCACCTATTCCATCTACTTCATCCTCCGAGTTAAGTACGGATCCTGCTCCAATTCCCAATATACATGCTTCCCCATCTCCAGGTCCTTTGGTTGAGGTTACTCAGGATATTCCTTCTTCCTCTTCCACAACTTCTCCTTCTGTTATTAAAAACACTCATCATATGGTTACTAGAGGCAAGAGTGGCATATTCAAACCCAAAGCTTTTGTCTCTGTTTCTACTTCAGATTATGATAATATTGAACCTCCTAATGTCAAGGAGGCCTTAAAATCTTCTCATTGGCGAAAGGCAATGCAGGATGAATTTGATGCTTTACAAAAGAATGAAACATGGGAATTGGTTCCTTCTCCGGATCATAAGAAAATTGTCGGTTGTAAATGGGTGTTTCGCATTAAACGAAACTCGGATGGCTCTATTTCTCGCTACAAAGCTCGTCTTGTAGCTAACACTACTACAAATTTGACCTTTATTGACGCTTGGCTTTTTACATTTATTGACATTTGTGTAAAAAAAACGTCAATAAACGTAATTTTTGTACTTTAA

mRNA sequence

ATGGCTAAATCTCACTCTCTCCCTTACTCTCCCTCTACTACCACTTACACAGCTCCTCTTCAATTAATTGTGTCTGACTTGTGGGGTCCTACATATATTCCTTCAGCAAATGGTTATCGGTATTATATTAGCTTTGTGGATGTTTTTAGTCGGTACACTTGGATATATTTTTTAAAATCCAAGTCCGATGCCTTTGCTGCTTTTGTTAAATTTAAAACCCACATTGAAAAGCTTCTCAATTTGCCTATTCTTCAATTTCAATCTGATAATGGTGGAGAGTTTCTGGCTTTCAAACCTTATTTAGATTCTCATGGCATTTCACATCGATTTTCTTGTCCTCACACTTCACAACAGAACGGGATTGCTGAGTGCAAGCACAGGCACATTGTCGATACTGGCCTAGCCTTGCTATCTCACTCCTCCATGCCTTTAAAATTCTGGGATGAAGCGTTCTCAACCGCTGTATTTTTTATAAATAGGCTGCCCTCTGAAGTTCTTCATGGCAAGAGTCCCTTGGATATCATCTTCTGCACTCACCCTGATTATTCTTTTCTTAAAACCTTCGGATGTCAGTGCTTTCCTTGTTTACGACCATATAAAACTCATAAGCTTGACTATAGGTCTGAACCTTGTGTTTTCATAGGATACAGTTCTTCTCATAAGGGTTATCGTTGCTTATCTGCTAATGGTAGGGTCTATGTTTCAAGGAATGTTTTATTTAATGAGTCCATTTTTCCCTTTTCCCAATTTCCATTGCAGTCTATCACCAAGTCTCCTCCCTCTGTCTCTTTACCTACTCTTGGGTCTATTTTACCTGTCTCTTCACCTATTCCATCTACTTCATCCTCCGAGTTAAGTACGGATCCTGCTCCAATTCCCAATATACATGCTTCCCCATCTCCAGGTCCTTTGGTTGAGGTTACTCAGGATATTCCTTCTTCCTCTTCCACAACTTCTCCTTCTGTTATTAAAAACACTCATCATATGGTTACTAGAGGCAAGAGTGGCATATTCAAACCCAAAGCTTTTGTCTCTGTTTCTACTTCAGATTATGATAATATTGAACCTCCTAATGTCAAGGAGGCCTTAAAATCTTCTCATTGGCGAAAGGCAATGCAGGATGAATTTGATGCTTTACAAAAGAATGAAACATGGGAATTGGTTCCTTCTCCGGATCATAAGAAAATTGTCGGTTGTAAATGGGTGTTTCGCATTAAACGAAACTCGGATGGCTCTATTTCTCGCTACAAAGCTCGTCTTGTAGCTAACACTACTACAAATTTGACCTTTATTGACGCTTGGCTTTTTACATTTATTGACATTTGTGTAAAAAAAACGTCAATAAACGTAATTTTTGTACTTTAA

Coding sequence (CDS)

ATGGCTAAATCTCACTCTCTCCCTTACTCTCCCTCTACTACCACTTACACAGCTCCTCTTCAATTAATTGTGTCTGACTTGTGGGGTCCTACATATATTCCTTCAGCAAATGGTTATCGGTATTATATTAGCTTTGTGGATGTTTTTAGTCGGTACACTTGGATATATTTTTTAAAATCCAAGTCCGATGCCTTTGCTGCTTTTGTTAAATTTAAAACCCACATTGAAAAGCTTCTCAATTTGCCTATTCTTCAATTTCAATCTGATAATGGTGGAGAGTTTCTGGCTTTCAAACCTTATTTAGATTCTCATGGCATTTCACATCGATTTTCTTGTCCTCACACTTCACAACAGAACGGGATTGCTGAGTGCAAGCACAGGCACATTGTCGATACTGGCCTAGCCTTGCTATCTCACTCCTCCATGCCTTTAAAATTCTGGGATGAAGCGTTCTCAACCGCTGTATTTTTTATAAATAGGCTGCCCTCTGAAGTTCTTCATGGCAAGAGTCCCTTGGATATCATCTTCTGCACTCACCCTGATTATTCTTTTCTTAAAACCTTCGGATGTCAGTGCTTTCCTTGTTTACGACCATATAAAACTCATAAGCTTGACTATAGGTCTGAACCTTGTGTTTTCATAGGATACAGTTCTTCTCATAAGGGTTATCGTTGCTTATCTGCTAATGGTAGGGTCTATGTTTCAAGGAATGTTTTATTTAATGAGTCCATTTTTCCCTTTTCCCAATTTCCATTGCAGTCTATCACCAAGTCTCCTCCCTCTGTCTCTTTACCTACTCTTGGGTCTATTTTACCTGTCTCTTCACCTATTCCATCTACTTCATCCTCCGAGTTAAGTACGGATCCTGCTCCAATTCCCAATATACATGCTTCCCCATCTCCAGGTCCTTTGGTTGAGGTTACTCAGGATATTCCTTCTTCCTCTTCCACAACTTCTCCTTCTGTTATTAAAAACACTCATCATATGGTTACTAGAGGCAAGAGTGGCATATTCAAACCCAAAGCTTTTGTCTCTGTTTCTACTTCAGATTATGATAATATTGAACCTCCTAATGTCAAGGAGGCCTTAAAATCTTCTCATTGGCGAAAGGCAATGCAGGATGAATTTGATGCTTTACAAAAGAATGAAACATGGGAATTGGTTCCTTCTCCGGATCATAAGAAAATTGTCGGTTGTAAATGGGTGTTTCGCATTAAACGAAACTCGGATGGCTCTATTTCTCGCTACAAAGCTCGTCTTGTAGCTAACACTACTACAAATTTGACCTTTATTGACGCTTGGCTTTTTACATTTATTGACATTTGTGTAAAAAAAACGTCAATAAACGTAATTTTTGTACTTTAA

Protein sequence

MAKSHSLPYSPSTTTYTAPLQLIVSDLWGPTYIPSANGYRYYISFVDVFSRYTWIYFLKSKSDAFAAFVKFKTHIEKLLNLPILQFQSDNGGEFLAFKPYLDSHGISHRFSCPHTSQQNGIAECKHRHIVDTGLALLSHSSMPLKFWDEAFSTAVFFINRLPSEVLHGKSPLDIIFCTHPDYSFLKTFGCQCFPCLRPYKTHKLDYRSEPCVFIGYSSSHKGYRCLSANGRVYVSRNVLFNESIFPFSQFPLQSITKSPPSVSLPTLGSILPVSSPIPSTSSSELSTDPAPIPNIHASPSPGPLVEVTQDIPSSSSTTSPSVIKNTHHMVTRGKSGIFKPKAFVSVSTSDYDNIEPPNVKEALKSSHWRKAMQDEFDALQKNETWELVPSPDHKKIVGCKWVFRIKRNSDGSISRYKARLVANTTTNLTFIDAWLFTFIDICVKKTSINVIFVL

Homology

[Close]

BLAST of Lag0031805 vs. NCBI nr
Match: RVW60229.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 429.9 bits (1104), Expect = 2.8e-116
Identity = 239/495 (48.28%), Postives = 313/495 (63.23%), Query Frame = 0


Query: 1    MAKSHSLPYSPSTTTYTAPLQLIVSDLWGPTYIPSANGYRYYISFVDVFSRYTWIYFLKS 60
            + KSH+LP+  S T YT PLQL+VSDLWGP  I S+ G+ YY+SFVD +SRYTW+YFLK+
Sbjct: 698  LGKSHNLPFPISQTVYTKPLQLVVSDLWGPAPINSSYGFTYYVSFVDAYSRYTWVYFLKT 757

Query: 61   KSDAFAAFVKFKTHIEKLLNLPILQFQSDNGGEFLAFKPYLDSHGISHRFSCPHTSQQNG 120
            KS    AF+ FK   E      +  FQ+D GGEF + K Y + +GI HR SCPHTS+QNG
Sbjct: 758  KSQTREAFLMFKAQAELQFGCKLKTFQTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNG 817

Query: 121  IAECKHRHIVDTGLALLSHSSMPLKFWDEAFSTAVFFINRLPSEVLHGKSPLDIIFCTHP 180
            I E KHRHIV+ GL LL+ +S+PLK+W +AFSTAVF INRLP+EVL  K P + +F + P
Sbjct: 818  IIERKHRHIVELGLTLLAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKCPYEFLFNSKP 877

Query: 181  DYSFLKTFGCQCFPCLRPYKTHKLDYRSEPCVFIGYSSSHKGYRCLSANGRVYVSRNVLF 240
            +YS LK FGC CFP LRPY  HKLD+RS PC F+GYSS HKGY+CL+  GR+++SR+V+F
Sbjct: 878  NYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVVF 937

Query: 241  NESIFPFS---QFPLQSITKS------------------PPSVSLPT------------L 300
            +E+ FPF+   Q P+Q ++ S                   PS+SLPT            L
Sbjct: 938  DETRFPFADRLQKPVQIVSHSTVGLPCIPLVKNLEPLSVSPSLSLPTSSAQSSHQLDENL 997

Query: 301  GS-ILPVSSPIPSTSSSE---LSTDPAPIP---NIHASPSPGPLVEVTQDIPSSSSTTSP 360
            GS I  V   + +T SS    +  + A IP   N++A P   PL     D P+ S  T P
Sbjct: 998  GSDIRSVQQDLSNTDSSSTVPILNESASIPSSSNLYALPGTIPL-STNSDEPNESINTRP 1057

Query: 361  SVI-KNTHHMVTRGKSGIFKPKAFVSVSTSDYDNIEPPNVKEALKSSHWRKAMQDEFDAL 420
                +  HHMVTR K+GIFKPK +    T D +  EP   +EA+    W++AM +EF AL
Sbjct: 1058 VTFPQQPHHMVTRSKNGIFKPKVY----TVDLNVEEPNTFQEAISHPKWKEAMDEEFRAL 1117

Query: 421  QKNETWELVPSPDHKKIVGCKWVFRIKRNSDGSISRYKARLVANTTTNLTFIDAWLFTFI 455
             KN+TW LV  P ++  VGC+WVF++KRN DGS+SRYKARLVA   + +   D +  TF 
Sbjct: 1118 MKNKTWSLVSLPTNRTSVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFD-FYETFS 1177

[Close]

BLAST of Lag0031805 vs. NCBI nr
Match: RVW44519.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 429.9 bits (1104), Expect = 2.8e-116
Identity = 239/495 (48.28%), Postives = 313/495 (63.23%), Query Frame = 0


Query: 1    MAKSHSLPYSPSTTTYTAPLQLIVSDLWGPTYIPSANGYRYYISFVDVFSRYTWIYFLKS 60
            + KSH+LP+  S T YT PLQL+VSDLWGP  I S+ G+ YY+SFVD +SRYTW+YFLK+
Sbjct: 562  LGKSHNLPFPISQTVYTKPLQLVVSDLWGPAPINSSYGFTYYVSFVDAYSRYTWVYFLKT 621

Query: 61   KSDAFAAFVKFKTHIEKLLNLPILQFQSDNGGEFLAFKPYLDSHGISHRFSCPHTSQQNG 120
            KS    AF+ FK   E      +  FQ+D GGEF + K Y + +GI HR SCPHTS+QNG
Sbjct: 622  KSQTREAFLMFKAQAELQFGCKLKTFQTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNG 681

Query: 121  IAECKHRHIVDTGLALLSHSSMPLKFWDEAFSTAVFFINRLPSEVLHGKSPLDIIFCTHP 180
            I E KHRHIV+ GL LL+ +S+PLK+W +AFSTAVF INRLP+EVL  K P + +F + P
Sbjct: 682  IIERKHRHIVELGLTLLAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKCPYEFLFNSKP 741

Query: 181  DYSFLKTFGCQCFPCLRPYKTHKLDYRSEPCVFIGYSSSHKGYRCLSANGRVYVSRNVLF 240
            +YS LK FGC CFP LRPY  HKLD+RS PC F+GYSS HKGY+CL+  GR+++SR+V+F
Sbjct: 742  NYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVVF 801

Query: 241  NESIFPFS---QFPLQSITKS------------------PPSVSLPT------------L 300
            +E+ FPF+   Q P+Q ++ S                   PS+SLPT            L
Sbjct: 802  DETRFPFADRLQKPVQIVSHSTVGLPCIPLVKNLEPLSVSPSLSLPTSSAQSSHQLDENL 861

Query: 301  GS-ILPVSSPIPSTSSSE---LSTDPAPIP---NIHASPSPGPLVEVTQDIPSSSSTTSP 360
            GS I  V   + +T SS    +  + A IP   N++A P   PL     D P+ S  T P
Sbjct: 862  GSDIRSVQQDLSNTDSSSTVPILNESASIPSSSNLYALPGTIPL-STNSDEPNESINTRP 921

Query: 361  SVI-KNTHHMVTRGKSGIFKPKAFVSVSTSDYDNIEPPNVKEALKSSHWRKAMQDEFDAL 420
                +  HHMVTR K+GIFKPK +    T D +  EP   +EA+    W++AM +EF AL
Sbjct: 922  VTFPQQPHHMVTRSKNGIFKPKVY----TVDLNVEEPNTFQEAISHPKWKEAMDEEFRAL 981

Query: 421  QKNETWELVPSPDHKKIVGCKWVFRIKRNSDGSISRYKARLVANTTTNLTFIDAWLFTFI 455
             KN+TW LV  P ++  VGC+WVF++KRN DGS+SRYKARLVA   + +   D +  TF 
Sbjct: 982  MKNKTWSLVSLPTNRTSVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFD-FYETFS 1041

[Close]

BLAST of Lag0031805 vs. NCBI nr
Match: RVX14937.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 425.2 bits (1092), Expect = 6.9e-115
Identity = 232/481 (48.23%), Postives = 301/481 (62.58%), Query Frame = 0


Query: 1   MAKSHSLPYSPSTTTYTAPLQLIVSDLWGPTYIPSANGYRYYISFVDVFSRYTWIYFLKS 60
           + K H  P+S S TTYT PL+LI SDLWGP  + S +GYRYYI FVD FSR++WI+ L++
Sbjct: 518 LGKIHMFPFSLSHTTYTKPLELIHSDLWGPAPVLSNSGYRYYIHFVDAFSRFSWIFLLRN 577

Query: 61  KSDAFAAFVKFKTHIEKLLNLPILQFQSDNGGEFLAFKPYLDSHGISHRFSCPHTSQQNG 120
           KS+A   FV FKT +E   +L I   Q+D GGEF AF+ YL  +GI HR SCPHT QQNG
Sbjct: 578 KSEAIKTFVNFKTQVELQFDLKIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNG 637

Query: 121 IAECKHRHIVDTGLALLSHSSMPLKFWDEAFSTAVFFINRLPSEVLHGKSPLDIIFCTHP 180
           +AE KHR IV+ GL LL   S+PLKFWDE+F T V+  NRLP+ VLH K P++++F + P
Sbjct: 638 VAERKHRTIVEHGLTLLHTVSLPLKFWDESFRTVVYLSNRLPTAVLHHKCPIEVLFKSIP 697

Query: 181 DYSFLKTFGCQCFPCLRPYKTHKLDYRSEPCVFIGYSSSHKGYRCLSANGRVYVSRNVLF 240
           DYSFLK FGC CFP LRPY THKL YRSE C F+GYS  HKGY+C+S+NGRVY+SR+V+F
Sbjct: 698 DYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISRDVIF 757

Query: 241 NESIFPFSQFPLQS----ITKSP------PSVSLPTLGSIL------PVSSPIPSTSSSE 300
           NE+ FP+S+    S     T SP      PS S P L   +      P+SS  P +    
Sbjct: 758 NETSFPYSKTIQVSSCLPSTVSPSTSHLSPSASPPVLSPTMLPAPTSPISSARPISEMDN 817

Query: 301 LSTDPAPIPN----------IHASPSPGPLVEVTQDIPSSSST-TSPSVIKNTHHMVTRG 360
           + +     PN          + ++P   P+  V   I  +S T T      NTH M+TR 
Sbjct: 818 IVSTHPHAPNSADTTLTPAQVVSNPVATPVQHVVSSIADASVTRTIAKDADNTHPMITRA 877

Query: 361 KSGIFKPKAFVSVSTSDYDNIEPPNVKEALKSSHWRKAMQDEFDALQKNETWELVPSPDH 420
           KSGI KPK F++         EP +V  AL+   W+KAM  E+DALQ+N TW LVP P  
Sbjct: 878 KSGIVKPKIFIAAVR------EPSSVSAALQQDEWKKAMVAEYDALQRNNTWSLVPLPAG 937

Query: 421 KKIVGCKWVFRIKRNSDGSISRYKARLVANTTTNLTFIDAWLFTFIDICVKKTSINVIFV 455
           ++ +GCKWV++ K N DG++ +YKARLVA         D +  TF  + VK ++I V+F 
Sbjct: 938 RQAIGCKWVYKTKENPDGTVQKYKARLVAKGFHQQAGFD-FTETFSPV-VKPSTIRVVFT 990

[Close]

BLAST of Lag0031805 vs. NCBI nr
Match: CAN81099.1 (hypothetical protein VITISV_017741 [Vitis vinifera])

HSP 1 Score: 424.1 bits (1089), Expect = 1.5e-114
Identity = 229/481 (47.61%), Postives = 301/481 (62.58%), Query Frame = 0


Query: 1    MAKSHSLPYSPSTTTYTAPLQLIVSDLWGPTYIPSANGYRYYISFVDVFSRYTWIYFLKS 60
            + K H  P+S S TTYT PL+LI  DLWGPT + S +GYRYYI FVD FSR++WI+ L++
Sbjct: 561  LGKIHRFPFSLSHTTYTKPLELIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRN 620

Query: 61   KSDAFAAFVKFKTHIEKLLNLPILQFQSDNGGEFLAFKPYLDSHGISHRFSCPHTSQQNG 120
            KS+A   FV FKT +E   +L I   Q+D GGEF AF+ YL  +GI HR SCPHT QQNG
Sbjct: 621  KSEAIKTFVNFKTQVELQFDLKIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNG 680

Query: 121  IAECKHRHIVDTGLALLSHSSMPLKFWDEAFSTAVFFINRLPSEVLHGKSPLDIIFCTHP 180
            +AE KHR IV+ GL LL  +S+PLKFWDE+F T V+  NRLP+ +LH K P++++F + P
Sbjct: 681  VAERKHRTIVEHGLTLLHTASLPLKFWDESFRTVVYLSNRLPTAILHHKCPIEVLFKSIP 740

Query: 181  DYSFLKTFGCQCFPCLRPYKTHKLDYRSEPCVFIGYSSSHKGYRCLSANGRVYVSRNVLF 240
            DYSFLK FGC CFP LRPY THKL YRSE C F+GYS  HKGY+C+S+NGRVY+S +V+F
Sbjct: 741  DYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISHDVIF 800

Query: 241  NESIFPFSQFPLQS----ITKSP------PSVSLPTLGSIL------PVSSPIPSTSSSE 300
            NE+ FP+S+    S     T SP      PS S P L   +      P+SS  P +    
Sbjct: 801  NETSFPYSKTIQVSSCLLSTVSPSTSHLSPSASPPVLSPTMLPTPTSPISSARPISEMDN 860

Query: 301  LSTDPAPIPN----------IHASPSPGPLVEVTQDIPSSSST-TSPSVIKNTHHMVTRG 360
            + +     PN          + ++P   P+  V   I  +S T T      NTH M+TR 
Sbjct: 861  IVSTHPHAPNSADTTLTPAQVVSNPVATPVQHVVSSIADASVTRTIAKDADNTHPMITRA 920

Query: 361  KSGIFKPKAFVSVSTSDYDNIEPPNVKEALKSSHWRKAMQDEFDALQKNETWELVPSPDH 420
            KSGI KPK F++         EP +V  AL+   W+KAM  E+DALQ+N TW LVP P  
Sbjct: 921  KSGIVKPKIFIAAIR------EPSSVSAALQQDEWKKAMVAEYDALQRNNTWSLVPLPAG 980

Query: 421  KKIVGCKWVFRIKRNSDGSISRYKARLVANTTTNLTFIDAWLFTFIDICVKKTSINVIFV 455
            ++ +GCKWV++ K N DG++ +YKARLVA         D +  TF  + VK +++ V+F 
Sbjct: 981  RQAIGCKWVYKTKENPDGTVQKYKARLVAKGFHQQAGFD-FTETFSPV-VKPSTVRVVFT 1033

[Close]

BLAST of Lag0031805 vs. NCBI nr
Match: KYP71160.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 423.3 bits (1087), Expect = 2.6e-114
Identity = 219/430 (50.93%), Postives = 287/430 (66.74%), Query Frame = 0


Query: 1   MAKSHSLPYSPSTTTYTAPLQLIVSDLWGPTYIPSANGYRYYISFVDVFSRYTWIYFLKS 60
           + KSH LP   S + Y+APL LI +DLWGP+++ S +GY YY+SF+D FS++TWIY LKS
Sbjct: 457 VGKSHRLPSLVSESVYSAPLDLIFTDLWGPSHVVSHSGYVYYVSFIDAFSKFTWIYPLKS 516

Query: 61  KSDAFAAFVKFKTHIEKLLNLPILQFQSDNGGEFLAFKPYLDSHGISHRFSCPHTSQQNG 120
           KSD  + F +FK  +E  LN  I   QSD GGE+ +F  +L +HGI+HR  CPHT  QNG
Sbjct: 517 KSDTLSVFQQFKAMVELQLNTKIKSIQSDWGGEYRSFTAFLATHGITHRLICPHTHHQNG 576

Query: 121 IAECKHRHIVDTGLALLSHSSMPLKFWDEAFSTAVFFINRLPSEVLHGKSPLDIIFCTHP 180
           + E KHRHIVD G+ LL H+S+PL FWD AFSTAV+ INRLP+  L+   P  ++F   P
Sbjct: 577 VVERKHRHIVDIGITLLHHASLPLTFWDYAFSTAVYLINRLPTASLNFDIPFTVLFKQTP 636

Query: 181 DYSFLKTFGCQCFPCLRPYKTHKLDYRSEPCVFIGYSSSHKGYRCLSANGRVYVSRNVLF 240
           DY FLKTFGC CFP LRPY THKLD+RS+ CVF+GYS+SHKGY+CLSA+G++Y+S++V+F
Sbjct: 637 DYKFLKTFGCACFPFLRPYTTHKLDFRSQECVFLGYSNSHKGYKCLSASGKIYISKDVIF 696

Query: 241 NESIFPFSQFPLQSITKSPPSVSLPTLGSILPVSSPIPSTSSSELSTDPAPIPNIHASP- 300
           NE+ FP+      + T  P      TL   L  S P   T++S L   P    + H+   
Sbjct: 697 NETRFPYLDLFQHTSTPVPSPSQYFTLNPDL--SPPCSHTTASSLPFIPVSETSNHSGQD 756

Query: 301 ---SPGPLVEVTQDIPSS--SSTTSPSVIK--NTHHMVTRGKSGIFKPKAFVSVSTSDYD 360
              S  P V      PSS  SST + +V +  N H M TR KSGI+KPK   S+  +   
Sbjct: 757 NILSVSPTVSQFNSTPSSPVSSTPTNTVSRTINNHSMQTRSKSGIYKPKMPPSLFLA--- 816

Query: 361 NIEPPNVKEALKSSHWRKAMQDEFDALQKNETWELVPSPDHKKIVGCKWVFRIKRNSDGS 420
           + EP NVK+AL    W  AM+ E+ AL +N TW+LVP P +++ VGCKWVFR+K N+DGS
Sbjct: 817 HSEPKNVKQALSDPDWFSAMKQEYSALLQNHTWDLVPLPSNRQAVGCKWVFRVKENADGS 876

Query: 421 ISRYKARLVA 423
           I+++KARLVA
Sbjct: 877 INKFKARLVA 881

[Close]

BLAST of Lag0031805 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 6.7e-89
Identity = 212/550 (38.55%), Postives = 277/550 (50.36%), Query Frame = 0


Query: 3    KSHSLPYSPSTTTYTAPLQLIVSDLWGPTYIPSANGYRYYISFVDVFSRYTWIYFLKSKS 62
            KS+ +P+S ST   T PL+ I SD+W  + I S + YRYY+ FVD F+RYTW+Y LK KS
Sbjct: 507  KSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKS 566

Query: 63   DAFAAFVKFKTHIEKLLNLPILQFQSDNGGEFLAFKPYLDSHGISHRFSCPHTSQQNGIA 122
                 F+ FK  +E      I  F SDNGGEF+A   Y   HGISH  S PHT + NG++
Sbjct: 567  QVKETFITFKNLLENRFQTRIGTFYSDNGGEFVALWEYFSQHGISHLTSPPHTPEHNGLS 626

Query: 123  ECKHRHIVDTGLALLSHSSMPLKFWDEAFSTAVFFINRLPSEVLHGKSPLDIIFCTHPDY 182
            E KHRHIV+TGL LLSH+S+P  +W  AF+ AV+ INRLP+ +L  +SP   +F T P+Y
Sbjct: 627  ERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNY 686

Query: 183  SFLKTFGCQCFPCLRPYKTHKLDYRSEPCVFIGYSSSHKGYRCLS-ANGRVYVSRNVLFN 242
              L+ FGC C+P LRPY  HKLD +S  CVF+GYS +   Y CL     R+Y+SR+V F+
Sbjct: 687  DKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFD 746

Query: 243  ESIFPFSQF-----PLQSITKS-----PPSVSLPTLGSILPV------------------ 302
            E+ FPFS +     P+Q   +       P  +LPT   +LP                   
Sbjct: 747  ENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSA 806

Query: 303  --------SSPIPSTSSSELSTDPAP---------------------------------- 362
                    SS + S+ SS   + P P                                  
Sbjct: 807  PFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTN 866

Query: 363  -----------IPNIHASPSPGPLVEVTQDIPSSSSTTSPSVI----------------- 422
                        P   +S SP P    T    SS+S T PS++                 
Sbjct: 867  ESPSQLAQSLSTPAQSSSSSPSP---TTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQA 926

Query: 423  -KNTHHMVTRGKSGIFKPKAFVSVSTSDYDNIEPPNVKEALKSSHWRKAMQDEFDALQKN 452
              NTH M TR K+GI KP    S++ S     EP    +ALK   WR AM  E +A   N
Sbjct: 927  PLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGN 986

[Close]

BLAST of Lag0031805 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 2.2e-87
Identity = 214/551 (38.84%), Postives = 282/551 (51.18%), Query Frame = 0


Query: 3    KSHSLPYSPSTTTYTAPLQLIVSDLWGPTYIPSANGYRYYISFVDVFSRYTWIYFLKSKS 62
            KSH +P+S ST T + PL+ I SD+W  + I S + YRYY+ FVD F+RYTW+Y LK KS
Sbjct: 486  KSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKS 545

Query: 63   DAFAAFVKFKTHIEKLLNLPILQFQSDNGGEFLAFKPYLDSHGISHRFSCPHTSQQNGIA 122
                 F+ FK+ +E      I    SDNGGEF+  + YL  HGISH  S PHT + NG++
Sbjct: 546  QVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLS 605

Query: 123  ECKHRHIVDTGLALLSHSSMPLKFWDEAFSTAVFFINRLPSEVLHGKSPLDIIFCTHPDY 182
            E KHRHIV+ GL LLSH+S+P  +W  AFS AV+ INRLP+ +L  +SP   +F   P+Y
Sbjct: 606  ERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNY 665

Query: 183  SFLKTFGCQCFPCLRPYKTHKLDYRSEPCVFIGYSSSHKGYRCLS-ANGRVYVSRNVLFN 242
              LK FGC C+P LRPY  HKL+ +S+ C F+GYS +   Y CL    GR+Y SR+V F+
Sbjct: 666  EKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFD 725

Query: 243  ESIFPFS----------QFPLQSITKSPPSVSLPTLGSILPV------------------ 302
            E  FPFS          +    S    P   +LPT   +LP                   
Sbjct: 726  ERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSP 785

Query: 303  ---------SSPIPSTS-SSELSTDP---------------------------------A 362
                     SS +PS+S SS  S++P                                 +
Sbjct: 786  SPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNS 845

Query: 363  PIPNIHASPSPGPLVEVTQ-------------DIPSSSSTT---------SPSVIK---- 422
            P PN     SP P   ++              + PSSSST+         +P +I+    
Sbjct: 846  PSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQ 905

Query: 423  ---NTHHMVTRGKSGIFKPKAFVSVSTSDYDNIEPPNVKEALKSSHWRKAMQDEFDALQK 452
               NTH M TR K GI KP    S +TS   N EP    +A+K   WR+AM  E +A   
Sbjct: 906  APVNTHSMATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIG 965

[Close]

BLAST of Lag0031805 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.4e-56
Identity = 152/460 (33.04%), Postives = 226/460 (49.13%), Query Frame = 0


Query: 3   KSHSLPYSPSTTTYTAPLQLIVSDLWGPTYIPSANGYRYYISFVDVFSRYTWIYFLKSKS 62
           K H + +  S+      L L+ SD+ GP  I S  G +Y+++F+D  SR  W+Y LK+K 
Sbjct: 464 KQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKD 523

Query: 63  DAFAAFVKFKTHIEKLLNLPILQFQSDNGGEFLA--FKPYLDSHGISHRFSCPHTSQQNG 122
             F  F KF   +E+     + + +SDNGGE+ +  F+ Y  SHGI H  + P T Q NG
Sbjct: 524 QVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNG 583

Query: 123 IAECKHRHIVDTGLALLSHSSMPLKFWDEAFSTAVFFINRLPSEVLHGKSPLDIIFCTHP 182
           +AE  +R IV+   ++L  + +P  FW EA  TA + INR PS  L  + P  +      
Sbjct: 584 VAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEV 643

Query: 183 DYSFLKTFGCQCFPCLRPYKTHKLDYRSEPCVFIGYSSSHKGYRCLS-ANGRVYVSRNVL 242
            YS LK FGC+ F  +   +  KLD +S PC+FIGY     GYR       +V  SR+V+
Sbjct: 644 SYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVV 703

Query: 243 FNESIFPFSQFPLQSITKSPPSVSLPTLGSILPVSSPIPSTSSSELSTDPAPIPNIHASP 302
           F E           S  ++   +S      I+P    IPSTS++  S +           
Sbjct: 704 FRE-----------SEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGE 763

Query: 303 SPGPLVEVTQDIPSS-SSTTSPSVIKNTHHMVTRGKSGIFKPKAFVSVS-TSDYDNIEPP 362
            PG ++E  + +         P+  +  H  + R +    + + + S       D+ EP 
Sbjct: 764 QPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDREPE 823

Query: 363 NVKEAL---KSSHWRKAMQDEFDALQKNETWELVPSPDHKKIVGCKWVFRIKRNSDGSIS 422
           ++KE L   + +   KAMQ+E ++LQKN T++LV  P  K+ + CKWVF++K++ D  + 
Sbjct: 824 SLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLV 883

Query: 423 RYKARLVANTTTNLTFIDAWLFTFIDICVKKTSINVIFVL 455
           RYKARLV         ID          VK TSI  I  L
Sbjct: 884 RYKARLVVKGFEQKKGID--FDEIFSPVVKMTSIRTILSL 910

[Close]

BLAST of Lag0031805 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 129.8 bits (325), Expect = 7.8e-29
Identity = 130/512 (25.39%), Postives = 210/512 (41.02%), Query Frame = 0


Query: 3   KSHSLPYS--PSTTTYTAPLQLIVSDLWGPTYIPSANGYRYYISFVDVFSRYTWIYFLKS 62
           K   LP+      T    PL ++ SD+ GP    + +   Y++ FVD F+ Y   Y +K 
Sbjct: 462 KQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKY 521

Query: 63  KSDAFAAFVKFKTHIEKLLNLPILQFQSDNGGEFLA--FKPYLDSHGISHRFSCPHTSQQ 122
           KSD F+ F  F    E   NL ++    DNG E+L+   + +    GIS+  + PHT Q 
Sbjct: 522 KSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQL 581

Query: 123 NGIAECKHRHIVDTGLALLSHSSMPLKFWDEAFSTAVFFINRLPSEVL--HGKSPLDIIF 182
           NG++E   R I +    ++S + +   FW EA  TA + INR+PS  L    K+P ++  
Sbjct: 582 NGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWH 641

Query: 183 CTHPDYSFLKTFGCQCFPCLRPYKTHKLDYRSEPCVFIGYSSSHKGYRCLSA-NGRVYVS 242
              P    L+ FG   +  ++  K  K D +S   +F+GY  +  G++   A N +  V+
Sbjct: 642 NKKPYLKHLRVFGATVYVHIK-NKQGKFDDKSFKSIFVGYEPN--GFKLWDAVNEKFIVA 701

Query: 243 RNVLFNESIF----------PFSQFPLQSITKSPPSVSLPTLGSILPVSSP-------IP 302
           R+V+ +E+             F +   +S  K+ P+ S   + +  P  S        + 
Sbjct: 702 RDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLK 761

Query: 303 STSSSELSTDPAPIPNIHASPSPGPLVEV-------------------------TQDIPS 362
            +  SE    P     I  +  P    E                             +  
Sbjct: 762 DSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNE 821

Query: 363 SSSTTSPSVIKNTHHMVTRGKSGIFKP----------------KAFVSVSTSDYDNI--- 422
           S  + +P+  + +       + GI  P                K    +S ++ DN    
Sbjct: 822 SKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNK 881

Query: 423 ----------EPPNVKEALK----SSHWRKAMQDEFDALQKNETWELVPSPDHKKIVGCK 433
                     + PN  + ++     S W +A+  E +A + N TW +   P++K IV  +
Sbjct: 882 VVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSR 941

[Close]

BLAST of Lag0031805 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 6.2e-18
Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = 0


Query: 329 MVTRGKSGIFKPKAFVSVSTSDYDNIEPPNVKEALKSSHWRKAMQDEFDALQKNETWELV 388
           M+TR K+GI K     S++ +     EP +V  ALK   W +AMQ+E DAL +N+TW LV
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60

Query: 389 PSPDHKKIVGCKWVFRIKRNSDGSISRYKARLVA 423
           P P ++ I+GCKWVF+ K +SDG++ R KARLVA
Sbjct: 61  PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVA 94

[Close]

BLAST of Lag0031805 vs. ExPASy TrEMBL
Match: A0A438FJP6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1134 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 1.4e-116
Identity = 239/495 (48.28%), Postives = 313/495 (63.23%), Query Frame = 0


Query: 1    MAKSHSLPYSPSTTTYTAPLQLIVSDLWGPTYIPSANGYRYYISFVDVFSRYTWIYFLKS 60
            + KSH+LP+  S T YT PLQL+VSDLWGP  I S+ G+ YY+SFVD +SRYTW+YFLK+
Sbjct: 698  LGKSHNLPFPISQTVYTKPLQLVVSDLWGPAPINSSYGFTYYVSFVDAYSRYTWVYFLKT 757

Query: 61   KSDAFAAFVKFKTHIEKLLNLPILQFQSDNGGEFLAFKPYLDSHGISHRFSCPHTSQQNG 120
            KS    AF+ FK   E      +  FQ+D GGEF + K Y + +GI HR SCPHTS+QNG
Sbjct: 758  KSQTREAFLMFKAQAELQFGCKLKTFQTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNG 817

Query: 121  IAECKHRHIVDTGLALLSHSSMPLKFWDEAFSTAVFFINRLPSEVLHGKSPLDIIFCTHP 180
            I E KHRHIV+ GL LL+ +S+PLK+W +AFSTAVF INRLP+EVL  K P + +F + P
Sbjct: 818  IIERKHRHIVELGLTLLAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKCPYEFLFNSKP 877

Query: 181  DYSFLKTFGCQCFPCLRPYKTHKLDYRSEPCVFIGYSSSHKGYRCLSANGRVYVSRNVLF 240
            +YS LK FGC CFP LRPY  HKLD+RS PC F+GYSS HKGY+CL+  GR+++SR+V+F
Sbjct: 878  NYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVVF 937

Query: 241  NESIFPFS---QFPLQSITKS------------------PPSVSLPT------------L 300
            +E+ FPF+   Q P+Q ++ S                   PS+SLPT            L
Sbjct: 938  DETRFPFADRLQKPVQIVSHSTVGLPCIPLVKNLEPLSVSPSLSLPTSSAQSSHQLDENL 997

Query: 301  GS-ILPVSSPIPSTSSSE---LSTDPAPIP---NIHASPSPGPLVEVTQDIPSSSSTTSP 360
            GS I  V   + +T SS    +  + A IP   N++A P   PL     D P+ S  T P
Sbjct: 998  GSDIRSVQQDLSNTDSSSTVPILNESASIPSSSNLYALPGTIPL-STNSDEPNESINTRP 1057

Query: 361  SVI-KNTHHMVTRGKSGIFKPKAFVSVSTSDYDNIEPPNVKEALKSSHWRKAMQDEFDAL 420
                +  HHMVTR K+GIFKPK +    T D +  EP   +EA+    W++AM +EF AL
Sbjct: 1058 VTFPQQPHHMVTRSKNGIFKPKVY----TVDLNVEEPNTFQEAISHPKWKEAMDEEFRAL 1117

Query: 421  QKNETWELVPSPDHKKIVGCKWVFRIKRNSDGSISRYKARLVANTTTNLTFIDAWLFTFI 455
             KN+TW LV  P ++  VGC+WVF++KRN DGS+SRYKARLVA   + +   D +  TF 
Sbjct: 1118 MKNKTWSLVSLPTNRTSVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFD-FYETFS 1177

[Close]

BLAST of Lag0031805 vs. ExPASy TrEMBL
Match: A0A438EA49 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2917 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 1.4e-116
Identity = 239/495 (48.28%), Postives = 313/495 (63.23%), Query Frame = 0


Query: 1    MAKSHSLPYSPSTTTYTAPLQLIVSDLWGPTYIPSANGYRYYISFVDVFSRYTWIYFLKS 60
            + KSH+LP+  S T YT PLQL+VSDLWGP  I S+ G+ YY+SFVD +SRYTW+YFLK+
Sbjct: 562  LGKSHNLPFPISQTVYTKPLQLVVSDLWGPAPINSSYGFTYYVSFVDAYSRYTWVYFLKT 621

Query: 61   KSDAFAAFVKFKTHIEKLLNLPILQFQSDNGGEFLAFKPYLDSHGISHRFSCPHTSQQNG 120
            KS    AF+ FK   E      +  FQ+D GGEF + K Y + +GI HR SCPHTS+QNG
Sbjct: 622  KSQTREAFLMFKAQAELQFGCKLKTFQTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNG 681

Query: 121  IAECKHRHIVDTGLALLSHSSMPLKFWDEAFSTAVFFINRLPSEVLHGKSPLDIIFCTHP 180
            I E KHRHIV+ GL LL+ +S+PLK+W +AFSTAVF INRLP+EVL  K P + +F + P
Sbjct: 682  IIERKHRHIVELGLTLLAQASLPLKYWPDAFSTAVFLINRLPTEVLKQKCPYEFLFNSKP 741

Query: 181  DYSFLKTFGCQCFPCLRPYKTHKLDYRSEPCVFIGYSSSHKGYRCLSANGRVYVSRNVLF 240
            +YS LK FGC CFP LRPY  HKLD+RS PC F+GYSS HKGY+CL+  GR+++SR+V+F
Sbjct: 742  NYSQLKVFGCLCFPHLRPYNKHKLDFRSSPCTFLGYSSKHKGYKCLNQQGRMFISRSVVF 801

Query: 241  NESIFPFS---QFPLQSITKS------------------PPSVSLPT------------L 300
            +E+ FPF+   Q P+Q ++ S                   PS+SLPT            L
Sbjct: 802  DETRFPFADRLQKPVQIVSHSTVGLPCIPLVKNLEPLSVSPSLSLPTSSAQSSHQLDENL 861

Query: 301  GS-ILPVSSPIPSTSSSE---LSTDPAPIP---NIHASPSPGPLVEVTQDIPSSSSTTSP 360
            GS I  V   + +T SS    +  + A IP   N++A P   PL     D P+ S  T P
Sbjct: 862  GSDIRSVQQDLSNTDSSSTVPILNESASIPSSSNLYALPGTIPL-STNSDEPNESINTRP 921

Query: 361  SVI-KNTHHMVTRGKSGIFKPKAFVSVSTSDYDNIEPPNVKEALKSSHWRKAMQDEFDAL 420
                +  HHMVTR K+GIFKPK +    T D +  EP   +EA+    W++AM +EF AL
Sbjct: 922  VTFPQQPHHMVTRSKNGIFKPKVY----TVDLNVEEPNTFQEAISHPKWKEAMDEEFRAL 981

Query: 421  QKNETWELVPSPDHKKIVGCKWVFRIKRNSDGSISRYKARLVANTTTNLTFIDAWLFTFI 455
             KN+TW LV  P ++  VGC+WVF++KRN DGS+SRYKARLVA   + +   D +  TF 
Sbjct: 982  MKNKTWSLVSLPTNRTSVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFD-FYETFS 1041

[Close]

BLAST of Lag0031805 vs. ExPASy TrEMBL
Match: A0A438K147 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2516 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 3.3e-115
Identity = 232/481 (48.23%), Postives = 301/481 (62.58%), Query Frame = 0


Query: 1   MAKSHSLPYSPSTTTYTAPLQLIVSDLWGPTYIPSANGYRYYISFVDVFSRYTWIYFLKS 60
           + K H  P+S S TTYT PL+LI SDLWGP  + S +GYRYYI FVD FSR++WI+ L++
Sbjct: 518 LGKIHMFPFSLSHTTYTKPLELIHSDLWGPAPVLSNSGYRYYIHFVDAFSRFSWIFLLRN 577

Query: 61  KSDAFAAFVKFKTHIEKLLNLPILQFQSDNGGEFLAFKPYLDSHGISHRFSCPHTSQQNG 120
           KS+A   FV FKT +E   +L I   Q+D GGEF AF+ YL  +GI HR SCPHT QQNG
Sbjct: 578 KSEAIKTFVNFKTQVELQFDLKIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNG 637

Query: 121 IAECKHRHIVDTGLALLSHSSMPLKFWDEAFSTAVFFINRLPSEVLHGKSPLDIIFCTHP 180
           +AE KHR IV+ GL LL   S+PLKFWDE+F T V+  NRLP+ VLH K P++++F + P
Sbjct: 638 VAERKHRTIVEHGLTLLHTVSLPLKFWDESFRTVVYLSNRLPTAVLHHKCPIEVLFKSIP 697

Query: 181 DYSFLKTFGCQCFPCLRPYKTHKLDYRSEPCVFIGYSSSHKGYRCLSANGRVYVSRNVLF 240
           DYSFLK FGC CFP LRPY THKL YRSE C F+GYS  HKGY+C+S+NGRVY+SR+V+F
Sbjct: 698 DYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISRDVIF 757

Query: 241 NESIFPFSQFPLQS----ITKSP------PSVSLPTLGSIL------PVSSPIPSTSSSE 300
           NE+ FP+S+    S     T SP      PS S P L   +      P+SS  P +    
Sbjct: 758 NETSFPYSKTIQVSSCLPSTVSPSTSHLSPSASPPVLSPTMLPAPTSPISSARPISEMDN 817

Query: 301 LSTDPAPIPN----------IHASPSPGPLVEVTQDIPSSSST-TSPSVIKNTHHMVTRG 360
           + +     PN          + ++P   P+  V   I  +S T T      NTH M+TR 
Sbjct: 818 IVSTHPHAPNSADTTLTPAQVVSNPVATPVQHVVSSIADASVTRTIAKDADNTHPMITRA 877

Query: 361 KSGIFKPKAFVSVSTSDYDNIEPPNVKEALKSSHWRKAMQDEFDALQKNETWELVPSPDH 420
           KSGI KPK F++         EP +V  AL+   W+KAM  E+DALQ+N TW LVP P  
Sbjct: 878 KSGIVKPKIFIAAVR------EPSSVSAALQQDEWKKAMVAEYDALQRNNTWSLVPLPAG 937

Query: 421 KKIVGCKWVFRIKRNSDGSISRYKARLVANTTTNLTFIDAWLFTFIDICVKKTSINVIFV 455
           ++ +GCKWV++ K N DG++ +YKARLVA         D +  TF  + VK ++I V+F 
Sbjct: 938 RQAIGCKWVYKTKENPDGTVQKYKARLVAKGFHQQAGFD-FTETFSPV-VKPSTIRVVFT 990

[Close]

BLAST of Lag0031805 vs. ExPASy TrEMBL
Match: A5BFT3 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_017741 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 7.4e-115
Identity = 229/481 (47.61%), Postives = 301/481 (62.58%), Query Frame = 0


Query: 1    MAKSHSLPYSPSTTTYTAPLQLIVSDLWGPTYIPSANGYRYYISFVDVFSRYTWIYFLKS 60
            + K H  P+S S TTYT PL+LI  DLWGPT + S +GYRYYI FVD FSR++WI+ L++
Sbjct: 561  LGKIHRFPFSLSHTTYTKPLELIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRN 620

Query: 61   KSDAFAAFVKFKTHIEKLLNLPILQFQSDNGGEFLAFKPYLDSHGISHRFSCPHTSQQNG 120
            KS+A   FV FKT +E   +L I   Q+D GGEF AF+ YL  +GI HR SCPHT QQNG
Sbjct: 621  KSEAIKTFVNFKTQVELQFDLKIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNG 680

Query: 121  IAECKHRHIVDTGLALLSHSSMPLKFWDEAFSTAVFFINRLPSEVLHGKSPLDIIFCTHP 180
            +AE KHR IV+ GL LL  +S+PLKFWDE+F T V+  NRLP+ +LH K P++++F + P
Sbjct: 681  VAERKHRTIVEHGLTLLHTASLPLKFWDESFRTVVYLSNRLPTAILHHKCPIEVLFKSIP 740

Query: 181  DYSFLKTFGCQCFPCLRPYKTHKLDYRSEPCVFIGYSSSHKGYRCLSANGRVYVSRNVLF 240
            DYSFLK FGC CFP LRPY THKL YRSE C F+GYS  HKGY+C+S+NGRVY+S +V+F
Sbjct: 741  DYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISHDVIF 800

Query: 241  NESIFPFSQFPLQS----ITKSP------PSVSLPTLGSIL------PVSSPIPSTSSSE 300
            NE+ FP+S+    S     T SP      PS S P L   +      P+SS  P +    
Sbjct: 801  NETSFPYSKTIQVSSCLLSTVSPSTSHLSPSASPPVLSPTMLPTPTSPISSARPISEMDN 860

Query: 301  LSTDPAPIPN----------IHASPSPGPLVEVTQDIPSSSST-TSPSVIKNTHHMVTRG 360
            + +     PN          + ++P   P+  V   I  +S T T      NTH M+TR 
Sbjct: 861  IVSTHPHAPNSADTTLTPAQVVSNPVATPVQHVVSSIADASVTRTIAKDADNTHPMITRA 920

Query: 361  KSGIFKPKAFVSVSTSDYDNIEPPNVKEALKSSHWRKAMQDEFDALQKNETWELVPSPDH 420
            KSGI KPK F++         EP +V  AL+   W+KAM  E+DALQ+N TW LVP P  
Sbjct: 921  KSGIVKPKIFIAAIR------EPSSVSAALQQDEWKKAMVAEYDALQRNNTWSLVPLPAG 980

Query: 421  KKIVGCKWVFRIKRNSDGSISRYKARLVANTTTNLTFIDAWLFTFIDICVKKTSINVIFV 455
            ++ +GCKWV++ K N DG++ +YKARLVA         D +  TF  + VK +++ V+F 
Sbjct: 981  RQAIGCKWVYKTKENPDGTVQKYKARLVAKGFHQQAGFD-FTETFSPV-VKPSTVRVVFT 1033

[Close]

BLAST of Lag0031805 vs. ExPASy TrEMBL
Match: A0A151TVT8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=3821 GN=KK1_010404 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 1.3e-114
Identity = 219/430 (50.93%), Postives = 287/430 (66.74%), Query Frame = 0


Query: 1   MAKSHSLPYSPSTTTYTAPLQLIVSDLWGPTYIPSANGYRYYISFVDVFSRYTWIYFLKS 60
           + KSH LP   S + Y+APL LI +DLWGP+++ S +GY YY+SF+D FS++TWIY LKS
Sbjct: 457 VGKSHRLPSLVSESVYSAPLDLIFTDLWGPSHVVSHSGYVYYVSFIDAFSKFTWIYPLKS 516

Query: 61  KSDAFAAFVKFKTHIEKLLNLPILQFQSDNGGEFLAFKPYLDSHGISHRFSCPHTSQQNG 120
           KSD  + F +FK  +E  LN  I   QSD GGE+ +F  +L +HGI+HR  CPHT  QNG
Sbjct: 517 KSDTLSVFQQFKAMVELQLNTKIKSIQSDWGGEYRSFTAFLATHGITHRLICPHTHHQNG 576

Query: 121 IAECKHRHIVDTGLALLSHSSMPLKFWDEAFSTAVFFINRLPSEVLHGKSPLDIIFCTHP 180
           + E KHRHIVD G+ LL H+S+PL FWD AFSTAV+ INRLP+  L+   P  ++F   P
Sbjct: 577 VVERKHRHIVDIGITLLHHASLPLTFWDYAFSTAVYLINRLPTASLNFDIPFTVLFKQTP 636

Query: 181 DYSFLKTFGCQCFPCLRPYKTHKLDYRSEPCVFIGYSSSHKGYRCLSANGRVYVSRNVLF 240
           DY FLKTFGC CFP LRPY THKLD+RS+ CVF+GYS+SHKGY+CLSA+G++Y+S++V+F
Sbjct: 637 DYKFLKTFGCACFPFLRPYTTHKLDFRSQECVFLGYSNSHKGYKCLSASGKIYISKDVIF 696

Query: 241 NESIFPFSQFPLQSITKSPPSVSLPTLGSILPVSSPIPSTSSSELSTDPAPIPNIHASP- 300
           NE+ FP+      + T  P      TL   L  S P   T++S L   P    + H+   
Sbjct: 697 NETRFPYLDLFQHTSTPVPSPSQYFTLNPDL--SPPCSHTTASSLPFIPVSETSNHSGQD 756

Query: 301 ---SPGPLVEVTQDIPSS--SSTTSPSVIK--NTHHMVTRGKSGIFKPKAFVSVSTSDYD 360
              S  P V      PSS  SST + +V +  N H M TR KSGI+KPK   S+  +   
Sbjct: 757 NILSVSPTVSQFNSTPSSPVSSTPTNTVSRTINNHSMQTRSKSGIYKPKMPPSLFLA--- 816

Query: 361 NIEPPNVKEALKSSHWRKAMQDEFDALQKNETWELVPSPDHKKIVGCKWVFRIKRNSDGS 420
           + EP NVK+AL    W  AM+ E+ AL +N TW+LVP P +++ VGCKWVFR+K N+DGS
Sbjct: 817 HSEPKNVKQALSDPDWFSAMKQEYSALLQNHTWDLVPLPSNRQAVGCKWVFRVKENADGS 876

Query: 421 ISRYKARLVA 423
           I+++KARLVA
Sbjct: 877 INKFKARLVA 881

[Close]

BLAST of Lag0031805 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 93.6 bits (231), Expect = 4.4e-19
Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = 0


Query: 329 MVTRGKSGIFKPKAFVSVSTSDYDNIEPPNVKEALKSSHWRKAMQDEFDALQKNETWELV 388
           M+TR K+GI K     S++ +     EP +V  ALK   W +AMQ+E DAL +N+TW LV
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60

Query: 389 PSPDHKKIVGCKWVFRIKRNSDGSISRYKARLVA 423
           P P ++ I+GCKWVF+ K +SDG++ R KARLVA
Sbjct: 61  PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVA 94

[Close]

BLAST of Lag0031805 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 76.6 bits (187), Expect = 5.6e-14
Identity = 64/189 (33.86%), Postives = 90/189 (47.62%), Query Frame = 0


Query: 273 VSSPIPSTSSSELSTDPA-------PIPNIHASPSPGPLVEVTQDIPSSSSTTSPSVIKN 332
           VS    STSSS +   P+       P P++H S          QD    S   +   I +
Sbjct: 2   VSDADASTSSSSIDIMPSANIQNDVPEPSVHTSHRRTRKPAYLQDYYCHS--VASLTIHD 61

Query: 333 THHMVTRGKSGIFKPKAFVSVSTSDYDNIEPPNVKEALKSSHWRKAMQDEFDALQKNETW 392
               ++  K         V ++ +     EP    EA +   W  AM DE  A++   TW
Sbjct: 62  ISQFLSYEKVSPLYHSFLVCIAKAK----EPSTYNEAKEFLVWCGAMDDEIGAMETTHTW 121

Query: 393 ELVPSPDHKKIVGCKWVFRIKRNSDGSISRYKARLVANTTTNLTFIDAWLFTFIDICVKK 452
           E+   P +KK +GCKWV++IK NSDG+I RYKARLVA   T    ID ++ TF  +C K 
Sbjct: 122 EICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGID-FIETFSPVC-KL 181

Query: 453 TSINVIFVL 455
           TS+ +I  +
Sbjct: 182 TSVKLILAI 182

[Close]

BLAST of Lag0031805 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 3.6e-05
Identity = 22/68 (32.35%), Postives = 39/68 (57.35%), Query Frame = 0


Query: 126 HRHIVDTGLALLSHSSMPLKFWDEAFSTAVFFINRLPSEVLHGKSPLDIIFCTHPDYSFL 185
           +R I++   ++L    +P  F  +A +TAV  IN+ PS  ++   P ++ F + P YS+L
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 186 KTFGCQCF 194
           + FGC  +
Sbjct: 62  RRFGCVAY 69

The following BLAST results are available for this feature:

BLAST of Lag0031805 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW60229.1	2.8e-116	48.28	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
RVW44519.1	2.8e-116	48.28	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
RVX14937.1	6.9e-115	48.23	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
CAN81099.1	1.5e-114	47.61	hypothetical protein VITISV_017741 [Vitis vinifera]	[more]
KYP71160.1	2.6e-114	50.93	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]

BLAST of Lag0031805 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	6.7e-89	38.55	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	2.2e-87	38.84	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	4.4e-56	33.04	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	7.8e-29	25.39	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92520	6.2e-18	50.00	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Lag0031805 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438FJP6	1.4e-116	48.28	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A0A438EA49	1.4e-116	48.28	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A0A438K147	3.3e-115	48.23	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX...	[more]
A5BFT3	7.4e-115	47.61	Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI...	[more]
A0A151TVT8	1.3e-114	50.93	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan OX=...	[more]

BLAST of Lag0031805 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00820.1	4.4e-19	50.00	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
AT4G23160.1	5.6e-14	33.86	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00710.1	3.6e-05	32.35	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 12..188 e-value: 5.5E-35 score: 122.4
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 17..115 e-value: 2.2E-10 score: 40.7
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 15..179 score: 21.277861
None	No IPR available	PANTHER	PTHR11439:SF324	RIBONUCLEASE H-LIKE DOMAIN, GAG-PRE-INTEGRASE DOMAIN, GAG-POLYPEPTIDE OF LTR COPIA-TYPE-RELATED	coord: 2..300
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 2..300
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 15..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0031805.1	Lag0031805.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding