Lag0031669 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0031669
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUlp1-like peptidase
Locationchr11: 11645223 .. 11645656 (-)
RNA-Seq ExpressionLag0031669
SyntenyLag0031669
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATAACTTACTTGATATGAGTAAATTACAGTTGTTTTCGAAGTTACACCTACGTGATTACGCTGATATGTATTCGTTTGGAATAGGATTTCTTGAACTGTCGCGAAGGCCTATTCCCGCAGATAAAAGGTAAGCCGTTGGAAGCCACTCAAGAAAATTGGCAACACGAGCAGATGTATTTGGACTATGCGCTAGGAATGGACACTGATTTCACTCCTACATGGGCAGACGTCGACTTTTTGTACACGGTGGCAACTAAGCAGGAGCATTACCTCCTCTTGGCGATGGGCATGAATCGAGGTGCAATTTACGTATACGATTCCATGCCCGGGTACATCAAACGGCCCCAAGTAGAGAAGTTGGAGCCACTTCGTCTTACGTTGCCATCGTTACTGCATGCATGCGACATGTTTACATATAAGCTTATCTAA

mRNA sequence

ATGGATTTCTTGAACTGTCGCGAAGGCCTATTCCCGCAGATAAAAGGTAAGCCGTTGGAAGCCACTCAAGAAAATTGGCAACACGAGCAGATGTATTTGGACTATGCGCTAGGAATGGACACTGATTTCACTCCTACATGGGCAGACGTCGACTTTTTGTACACGGTGGCAACTAAGCAGGAGCATTACCTCCTCTTGGCGATGGGCATGAATCGAGGTGCAATTTACGTATACGATTCCATGCCCGGGTACATCAAACGGCCCCAAGTAGAGAAGTTGGAGCCACTTCGTCTTACGTTGCCATCGTTACTGCATGCATGCGACATGTTTACATATAAGCTTATCTAA

Coding sequence (CDS)

ATGGATTTCTTGAACTGTCGCGAAGGCCTATTCCCGCAGATAAAAGGTAAGCCGTTGGAAGCCACTCAAGAAAATTGGCAACACGAGCAGATGTATTTGGACTATGCGCTAGGAATGGACACTGATTTCACTCCTACATGGGCAGACGTCGACTTTTTGTACACGGTGGCAACTAAGCAGGAGCATTACCTCCTCTTGGCGATGGGCATGAATCGAGGTGCAATTTACGTATACGATTCCATGCCCGGGTACATCAAACGGCCCCAAGTAGAGAAGTTGGAGCCACTTCGTCTTACGTTGCCATCGTTACTGCATGCATGCGACATGTTTACATATAAGCTTATCTAA

Protein sequence

MDFLNCREGLFPQIKGKPLEATQENWQHEQMYLDYALGMDTDFTPTWADVDFLYTVATKQEHYLLLAMGMNRGAIYVYDSMPGYIKRPQVEKLEPLRLTLPSLLHACDMFTYKLI
Homology
BLAST of Lag0031669 vs. NCBI nr
Match: XP_038899753.1 (uncharacterized protein LOC120086987 [Benincasa hispida] >XP_038899754.1 uncharacterized protein LOC120086987 [Benincasa hispida])

HSP 1 Score: 99.0 bits (245), Expect = 2.9e-17
Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 0

Query: 4   LNCREGLFPQIKGKPLEATQENWQHEQMYLDYALGMDTDFTPTWADVDFLYTVATKQEHY 63
           LN   G+F +IK K L      W+ E  Y +Y +G    F   WADVDF+YT     EH+
Sbjct: 75  LNAHGGVFRRIKNKTLLEAALAWEDEDTYKNYVIG---KFDVKWADVDFIYTAMNISEHW 134

Query: 64  LLLAMGMNRGAIYVYDSMPGYIKRPQ-VEKLEPLRLTLPSLLHACDM 110
           ++LAM +NRG I+V+DS+P Y    + V  LEPL +T+PSLLH CD+
Sbjct: 135 IVLAMDINRGHIFVFDSLPSYTPMTKLVNWLEPLTVTVPSLLHYCDV 178

BLAST of Lag0031669 vs. NCBI nr
Match: XP_038881126.1 (uncharacterized protein LOC120072727 [Benincasa hispida])

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-14
Identity = 44/106 (41.51%), Postives = 63/106 (59.43%), Query Frame = 0

Query: 4   LNCREGLFPQIKGKPLEATQENWQHEQMYLDYALGMDTDFTPTWADVDFLYTVATKQEHY 63
           LN R G++  IK K        W+ E+ YLDY +G    F   W+DVDF+YT     +H+
Sbjct: 17  LNARNGVYKHIKNKSTFHAAVVWE-EETYLDYVMG---KFDIKWSDVDFVYTTTNINQHW 76

Query: 64  LLLAMGMNRGAIYVYDSMPGYIKRPQVEK-LEPLRLTLPSLLHACD 109
           +L+A  +N G ++V+DS+P    + ++E  LEPL  TL SLLH CD
Sbjct: 77  MLIAFDLNGGQLFVFDSLPSMTSKKELESCLEPLTYTLQSLLHYCD 118

BLAST of Lag0031669 vs. NCBI nr
Match: XP_038902498.1 (uncharacterized protein LOC120089158 [Benincasa hispida])

HSP 1 Score: 85.1 bits (209), Expect = 4.3e-13
Identity = 42/107 (39.25%), Postives = 62/107 (57.94%), Query Frame = 0

Query: 4   LNCREGLFPQIKGKPLEATQENWQHEQMYLDYALGMDTDFTPTWADVDFLYTVATKQEHY 63
           LN R+G++  +K K        W  E +  DY +G    F   W DVDF+YT     +H+
Sbjct: 199 LNSRDGVYKHMKNKSTLEAAVAWVDETL-PDYVMG---KFDVKWLDVDFIYTTTNIDQHW 258

Query: 64  LLLAMGMNRGAIYVYDSMPGYIKRPQVEK-LEPLRLTLPSLLHACDM 110
           +L+A  +NRG ++V+DS+P    + ++E  LE L  TLPSLLH CD+
Sbjct: 259 MLVAFDLNRGRLFVFDSLPSMTSKKKLESFLESLTYTLPSLLHYCDL 301

BLAST of Lag0031669 vs. NCBI nr
Match: XP_038875042.1 (uncharacterized protein LOC120067568 [Benincasa hispida])

HSP 1 Score: 79.3 bits (194), Expect = 2.3e-11
Identity = 36/86 (41.86%), Postives = 55/86 (63.95%), Query Frame = 0

Query: 29  EQMYLDYALGMDTDFTPTWADVDFLYTVATKQEHYLLLAMGMNRGAIYVYDSMPGYIKRP 88
           ++M  DY +G    F   W+DVDF+YT     +H++L+A  +NR  ++V+DS+P    + 
Sbjct: 3   DEMLPDYVMG---KFDVKWSDVDFVYTTTNIDQHWMLIAFNLNRDQLFVFDSLPSMTSKK 62

Query: 89  QVEK-LEPLRLTLPSLLHACDMFTYK 114
           ++E  LEPL  TLPSLLH CD+  +K
Sbjct: 63  KLESFLEPLTYTLPSLLHYCDLKRWK 85

BLAST of Lag0031669 vs. NCBI nr
Match: XP_022154997.1 (uncharacterized protein LOC111022140 [Momordica charantia])

HSP 1 Score: 74.3 bits (181), Expect = 7.5e-10
Identity = 33/78 (42.31%), Postives = 52/78 (66.67%), Query Frame = 0

Query: 33  LDYALGMDTDFTPTWADVDFLYTVATKQEHYLLLAMGMNRGAIYVYDSMPGYIKRPQVE- 92
           +D  LG   DF P W DVD +Y++   ++H++L+A+ M +  I+VYDS+PG+I   ++  
Sbjct: 1   MDVVLGQVEDFIPAWVDVDVVYSLLLIRDHWVLVAIDMTQSEIFVYDSLPGHISTSKLMI 60

Query: 93  KLEPLRLTLPSLLHACDM 110
            L PL  T+PSLL+AC +
Sbjct: 61  DLRPLSHTIPSLLYACGL 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038899753.12.9e-1745.79uncharacterized protein LOC120086987 [Benincasa hispida] >XP_038899754.1 unchara... [more]
XP_038881126.11.7e-1441.51uncharacterized protein LOC120072727 [Benincasa hispida][more]
XP_038902498.14.3e-1339.25uncharacterized protein LOC120089158 [Benincasa hispida][more]
XP_038875042.12.3e-1141.86uncharacterized protein LOC120067568 [Benincasa hispida][more]
XP_022154997.17.5e-1042.31uncharacterized protein LOC111022140 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0031669.1Lag0031669.1mRNA