Lag0031667 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0031667
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionMuDRA-like transposase
Locationchr11: 11637720 .. 11638289 (+)
RNA-Seq ExpressionLag0031667
SyntenyLag0031667
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAATTGCAATTGATGAGTTCGGGCTACTAGACTTGAGGTTAGTGACGTATTCACCATCGAAGTATGTCAACACTCACACGTGCTCTATTGAGCTGTTGAATCACGACCACCAGCAAGCTAGCGCTGGTGTGGTTGGCCACCTGATAAAGGAGCGACTATCCGAGGTTGGTCGTGTATACAAGCCTCGTCATATTATTGAGGACAAGGCATGGCGAGCAAGGGAACGTGTTTTTGCACTATCTAAGGGTTCTCCAACAGAGTCTTATGGTACGCTGCAAGCTTATGGAGAAACTCTTAAGATTTCGAATCCAGGGACATTGTTTGAGGTTGAATTAGAAGATGACCTTTATTTCAAATACGCTTTCATGGCGTTAGGAGCTTGCGTCCAAGGATATGCCAATTGTCGGCCAGTTATTGTGGTAGACGGTTCCCACCTGAAAGGGAAGTACAATGGGACCATGTTGGTCGGTGTAGCTCTAGACGGAAACAGCCAAGTGTATCATCTAGCCTACACAATCGTGGACAAGAAGACCGATCGGTCATGGACATGGTTCATGCAGACTTGA

mRNA sequence

ATGACAATTGCAATTGATGAGTTCGGGCTACTAGACTTGAGGTTAGTGACGTATTCACCATCGAAGTATGTCAACACTCACACGTGCTCTATTGAGCTGTTGAATCACGACCACCAGCAAGCTAGCGCTGGTGTGGTTGGCCACCTGATAAAGGAGCGACTATCCGAGGTTGGTCGTGTATACAAGCCTCGTCATATTATTGAGGACAAGGCATGGCGAGCAAGGGAACGTGTTTTTGCACTATCTAAGGGTTCTCCAACAGAGTCTTATGGTACGCTGCAAGCTTATGGAGAAACTCTTAAGATTTCGAATCCAGGGACATTGTTTGAGGTTGAATTAGAAGATGACCTTTATTTCAAATACGCTTTCATGGCGTTAGGAGCTTGCGTCCAAGGATATGCCAATTGTCGGCCAGTTATTGTGGTAGACGGTTCCCACCTGAAAGGGAAGTACAATGGGACCATGTTGGTCGGTGTAGCTCTAGACGGAAACAGCCAAGTGTATCATCTAGCCTACACAATCGTGGACAAGAAGACCGATCGGTCATGGACATGGTTCATGCAGACTTGA

Coding sequence (CDS)

ATGACAATTGCAATTGATGAGTTCGGGCTACTAGACTTGAGGTTAGTGACGTATTCACCATCGAAGTATGTCAACACTCACACGTGCTCTATTGAGCTGTTGAATCACGACCACCAGCAAGCTAGCGCTGGTGTGGTTGGCCACCTGATAAAGGAGCGACTATCCGAGGTTGGTCGTGTATACAAGCCTCGTCATATTATTGAGGACAAGGCATGGCGAGCAAGGGAACGTGTTTTTGCACTATCTAAGGGTTCTCCAACAGAGTCTTATGGTACGCTGCAAGCTTATGGAGAAACTCTTAAGATTTCGAATCCAGGGACATTGTTTGAGGTTGAATTAGAAGATGACCTTTATTTCAAATACGCTTTCATGGCGTTAGGAGCTTGCGTCCAAGGATATGCCAATTGTCGGCCAGTTATTGTGGTAGACGGTTCCCACCTGAAAGGGAAGTACAATGGGACCATGTTGGTCGGTGTAGCTCTAGACGGAAACAGCCAAGTGTATCATCTAGCCTACACAATCGTGGACAAGAAGACCGATCGGTCATGGACATGGTTCATGCAGACTTGA

Protein sequence

MTIAIDEFGLLDLRLVTYSPSKYVNTHTCSIELLNHDHQQASAGVVGHLIKERLSEVGRVYKPRHIIEDKAWRARERVFALSKGSPTESYGTLQAYGETLKISNPGTLFEVELEDDLYFKYAFMALGACVQGYANCRPVIVVDGSHLKGKYNGTMLVGVALDGNSQVYHLAYTIVDKKTDRSWTWFMQT
Homology
BLAST of Lag0031667 vs. NCBI nr
Match: XP_038896520.1 (uncharacterized protein LOC120084770 [Benincasa hispida])

HSP 1 Score: 236.5 bits (602), Expect = 1.9e-58
Identity = 105/176 (59.66%), Postives = 136/176 (77.27%), Query Frame = 0

Query: 24  VNTHTCSIELLNHDHQQASAGVVGHLIKERLSEVGRVYKPRHIIE------------DKA 83
           + +HTC I +LNHDH+QA+  +VG LIK++ + + RVYKP HI+E            DK 
Sbjct: 1   MRSHTCFIGILNHDHRQATTTIVGELIKDKFTGIERVYKPHHIVEVMRKEYDINISYDKT 60

Query: 84  WRARERVFALSKGSPTESYGTLQAYGETLKISNPGTLFEVELEDDLYFKYAFMALGACVQ 143
           WR RE  +AL++G+P ESY  L AYGETLK+ NPGT FE+ELE D++FKY F+ALG C++
Sbjct: 61  WRTRETAYALARGTPEESYAVLHAYGETLKMENPGTRFEIELESDVHFKYMFIALGPCIR 120

Query: 144 GYANCRPVIVVDGSHLKGKYNGTMLVGVALDGNSQVYHLAYTIVDKKTDRSWTWFM 188
           G+++CRPVI+VDGSHLKGKY GTMLVGV++DGN+QVY LAY IVD +TDR+W WFM
Sbjct: 121 GFSSCRPVIIVDGSHLKGKYKGTMLVGVSMDGNNQVYPLAYAIVDNETDRAWKWFM 176

BLAST of Lag0031667 vs. NCBI nr
Match: XP_038902318.1 (uncharacterized protein LOC120088954 [Benincasa hispida])

HSP 1 Score: 235.7 bits (600), Expect = 3.2e-58
Identity = 106/179 (59.22%), Postives = 140/179 (78.21%), Query Frame = 0

Query: 21  SKYVNTHTCSIELLNHDHQQASAGVVGHLIKERLSEVGRVYKPRHIIE------------ 80
           +K++ +HTCSI +LNHDH+QA+A VVG LIK++ + +G VYKP HI++            
Sbjct: 174 TKHIRSHTCSIGILNHDHRQATAAVVGELIKDKFTGIGCVYKPCHIVKDMRKEYGVNISY 233

Query: 81  DKAWRARERVFALSKGSPTESYGTLQAYGETLKISNPGTLFEVELEDDLYFKYAFMALGA 140
           DKAWRARE  +AL++G+P ESY  L AYGE LK+ NPGT FE+ELE+D++ KY FMALG 
Sbjct: 234 DKAWRARETAYALARGTPEESYVVLHAYGEALKMENPGTRFEIELENDVHLKYMFMALGP 293

Query: 141 CVQGYANCRPVIVVDGSHLKGKYNGTMLVGVALDGNSQVYHLAYTIVDKKTDRSWTWFM 188
           C++G+++CRPVI+VDGSHLKGKY  TMLVGV++DGN+QVY LAY IVD + DR+W WF+
Sbjct: 294 CIRGFSSCRPVIIVDGSHLKGKYKRTMLVGVSMDGNNQVYPLAYAIVDNEIDRAWKWFI 352

BLAST of Lag0031667 vs. NCBI nr
Match: XP_038902336.1 (uncharacterized protein LOC120088970 [Benincasa hispida])

HSP 1 Score: 235.3 bits (599), Expect = 4.2e-58
Identity = 105/178 (58.99%), Postives = 138/178 (77.53%), Query Frame = 0

Query: 22  KYVNTHTCSIELLNHDHQQASAGVVGHLIKERLSEVGRVYKPRHIIE------------D 81
           KY+ +HTC I +LNHDH+QA+  VVG LIK++ + +GRVYKPRHI+E            D
Sbjct: 110 KYMRSHTCFIGILNHDHRQATIVVVGELIKDKFTGIGRVYKPRHIVEDMKKEYGINISYD 169

Query: 82  KAWRARERVFALSKGSPTESYGTLQAYGETLKISNPGTLFEVELEDDLYFKYAFMALGAC 141
           K WRARE  +AL++G+P ESY  L AYG+TLK+ NPGT FE+ELE+D++FKY F+ L  C
Sbjct: 170 KVWRARETTYALARGTPEESYAVLHAYGQTLKMENPGTRFEIELENDVHFKYMFIELEPC 229

Query: 142 VQGYANCRPVIVVDGSHLKGKYNGTMLVGVALDGNSQVYHLAYTIVDKKTDRSWTWFM 188
           ++G+++CRP+I+VDGSHLK KY GTMLVGV++D N+QVY LAY IVD +TDR+W WFM
Sbjct: 230 IKGFSSCRPMIIVDGSHLKEKYKGTMLVGVSMDNNNQVYPLAYAIVDNETDRAWKWFM 287

BLAST of Lag0031667 vs. NCBI nr
Match: XP_038888366.1 (uncharacterized protein LOC120078210 [Benincasa hispida])

HSP 1 Score: 232.6 bits (592), Expect = 2.7e-57
Identity = 106/179 (59.22%), Postives = 138/179 (77.09%), Query Frame = 0

Query: 21  SKYVNTHTCSIELLNHDHQQASAGVVGHLIKERLSEVGRVYKPRHIIE------------ 80
           +KY+ +HTCSI +LNHDH+QA+  VVG LIK++ + +GRVYKPRHIIE            
Sbjct: 55  TKYMRSHTCSIGILNHDHKQATTTVVGELIKDKFTGIGRVYKPRHIIEDMKKEYGVNISY 114

Query: 81  DKAWRARERVFALSKGSPTESYGTLQAYGETLKISNPGTLFEVELEDDLYFKYAFMALGA 140
           DKAWRARE  +AL++G+P ES   L  YGE L + N GT FE++LE+D++FKY FMALG 
Sbjct: 115 DKAWRARETAYALARGTPEESCIVLHTYGEALNMENLGTRFEIKLENDVHFKYMFMALGP 174

Query: 141 CVQGYANCRPVIVVDGSHLKGKYNGTMLVGVALDGNSQVYHLAYTIVDKKTDRSWTWFM 188
           C++G+++CRPVI+VDGSHLK KY G +LVGV++DGN+QVY LAY IVD +TDR+W WFM
Sbjct: 175 CIRGFSSCRPVIIVDGSHLKEKYKGAILVGVSMDGNNQVYPLAYAIVDNETDRAWKWFM 233

BLAST of Lag0031667 vs. NCBI nr
Match: XP_038896223.1 (uncharacterized protein LOC120084500 [Benincasa hispida])

HSP 1 Score: 232.3 bits (591), Expect = 3.6e-57
Identity = 105/179 (58.66%), Postives = 136/179 (75.98%), Query Frame = 0

Query: 21  SKYVNTHTCSIELLNHDHQQASAGVVGHLIKERLSEVGRVYKPRHIIE------------ 80
           +KY ++HTCSI +LNHDH+QA+A VVG LIK++ + +G +YKP HI+E            
Sbjct: 10  TKYCSSHTCSIGILNHDHRQATATVVGQLIKDKFTGIGCIYKPCHIVEDMMRDDGVNISY 69

Query: 81  DKAWRARERVFALSKGSPTESYGTLQAYGETLKISNPGTLFEVELEDDLYFKYAFMALGA 140
           DKAWRARE  + L++G+P  SY  L AYGE  KI N G +FE+ELED+++FKY FMALG 
Sbjct: 70  DKAWRAREAAYDLTRGTPKYSYSILHAYGEAQKIENSGIVFEIELEDEVHFKYMFMALGP 129

Query: 141 CVQGYANCRPVIVVDGSHLKGKYNGTMLVGVALDGNSQVYHLAYTIVDKKTDRSWTWFM 188
           C++G+A+CRP I VDGSHLKGKY GTMLV V++DGN+Q+Y LAY I+D +TDRSW WFM
Sbjct: 130 CIRGFASCRPCITVDGSHLKGKYKGTMLVAVSMDGNNQLYPLAYAIIDNETDRSWKWFM 188

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038896520.11.9e-5859.66uncharacterized protein LOC120084770 [Benincasa hispida][more]
XP_038902318.13.2e-5859.22uncharacterized protein LOC120088954 [Benincasa hispida][more]
XP_038902336.14.2e-5858.99uncharacterized protein LOC120088970 [Benincasa hispida][more]
XP_038888366.12.7e-5759.22uncharacterized protein LOC120078210 [Benincasa hispida][more]
XP_038896223.13.6e-5758.66uncharacterized protein LOC120084500 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018289MULE transposase domainPFAMPF10551MULEcoord: 139..188
e-value: 2.2E-7
score: 31.2
NoneNo IPR availablePANTHERPTHR31973POLYPROTEIN, PUTATIVE-RELATEDcoord: 25..188
NoneNo IPR availablePANTHERPTHR31973:SF129OS01G0334000 PROTEINcoord: 25..188

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0031667.1Lag0031667.1mRNA