Lag0031567 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0031567
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	zinc finger CCHC domain-containing protein 10
Location	chr11: 10123903 .. 10124694 (+)
RNA-Seq Expression	Lag0031567
Synteny	Lag0031567

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAGTAAGAAGGAGGAGAAGTCACAAGCTGCTGCTGAAAGGATTAAGGCTGCAGCTCTTAGTGCTGCAAAAGGCCTTAGTCGTGCTCAGGCTGAACGAGCAGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGCCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAAGCAGTCAGATTGGGTGAAAGAAAGGACCTTAAGGCCTCTATGTCTAGTACTGGTGGAGCTGCTGCACAGTGCCAGAAATGTTATCAGGTGGGACACTGGACGTATGAATGCAAAAATGAACGAGTTTACATATCCCGACCATCTCGAACTCAACAACTAAAAAATCCCAAGTTGAGGATGAAGATGACAGTCTCATATGAGTTGGACAACCCAGATTCTGATAAGGAGAAGAAGACCGAGAAGCATTTGAAGAAGAAAAGTAAAAGAAAGCATCGGTCTAACGCAAGATCCAATAGCGATAGTGAGGCATCTGTTTTCGAGACCGATAGTGGGTCATCCTCAGTTACGGGTTCTGATGTTTCTTCTGAAGAAAGCAGTTCAGACTACAGTTCTTCATCTGAATCAGAATCAGAAAGAAGTCGGAGTAGGAGAAAGAAGCAGAAGAGGGGAAGGAGAAAGAGGAGGTACAGCTCTTCTGAATCTTCTGATTCAGACTCAGGGTCTGAATCCGAATCTGATTATGAGGACAAACGTAGTAGGAGGAAGAGCCGAAGGCACAACAGAAGACGCTAG

mRNA sequence

ATGTCTAGTAAGAAGGAGGAGAAGTCACAAGCTGCTGCTGAAAGGATTAAGGCTGCAGCTCTTAGTGCTGCAAAAGGCCTTAGTCGTGCTCAGGCTGAACGAGCAGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGCCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAAGCAGTCAGATTGGGTGAAAGAAAGGACCTTAAGGCCTCTATGTCTAGTACTGGTGGAGCTGCTGCACAGTGCCAGAAATGTTATCAGGTGGGACACTGGACGTATGAATGCAAAAATGAACGAGTTTACATATCCCGACCATCTCGAACTCAACAACTAAAAAATCCCAAGTTGAGGATGAAGATGACAGTCTCATATGAGTTGGACAACCCAGATTCTGATAAGGAGAAGAAGACCGAGAAGCATTTGAAGAAGAAAAGTAAAAGAAAGCATCGGTCTAACGCAAGATCCAATAGCGATAGTGAGGCATCTGTTTTCGAGACCGATAGTGGGTCATCCTCAGTTACGGGTTCTGATGTTTCTTCTGAAGAAAGCAGTTCAGACTACAGTTCTTCATCTGAATCAGAATCAGAAAGAAGTCGGAGTAGGAGAAAGAAGCAGAAGAGGGGAAGGAGAAAGAGGAGGTACAGCTCTTCTGAATCTTCTGATTCAGACTCAGGGTCTGAATCCGAATCTGATTATGAGGACAAACGTAGTAGGAGGAAGAGCCGAAGGCACAACAGAAGACGCTAG

Coding sequence (CDS)

ATGTCTAGTAAGAAGGAGGAGAAGTCACAAGCTGCTGCTGAAAGGATTAAGGCTGCAGCTCTTAGTGCTGCAAAAGGCCTTAGTCGTGCTCAGGCTGAACGAGCAGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGCCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAAGCAGTCAGATTGGGTGAAAGAAAGGACCTTAAGGCCTCTATGTCTAGTACTGGTGGAGCTGCTGCACAGTGCCAGAAATGTTATCAGGTGGGACACTGGACGTATGAATGCAAAAATGAACGAGTTTACATATCCCGACCATCTCGAACTCAACAACTAAAAAATCCCAAGTTGAGGATGAAGATGACAGTCTCATATGAGTTGGACAACCCAGATTCTGATAAGGAGAAGAAGACCGAGAAGCATTTGAAGAAGAAAAGTAAAAGAAAGCATCGGTCTAACGCAAGATCCAATAGCGATAGTGAGGCATCTGTTTTCGAGACCGATAGTGGGTCATCCTCAGTTACGGGTTCTGATGTTTCTTCTGAAGAAAGCAGTTCAGACTACAGTTCTTCATCTGAATCAGAATCAGAAAGAAGTCGGAGTAGGAGAAAGAAGCAGAAGAGGGGAAGGAGAAAGAGGAGGTACAGCTCTTCTGAATCTTCTGATTCAGACTCAGGGTCTGAATCCGAATCTGATTATGAGGACAAACGTAGTAGGAGGAAGAGCCGAAGGCACAACAGAAGACGCTAG

Protein sequence

MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDLKASMSSTGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMTVSYELDNPDSDKEKKTEKHLKKKSKRKHRSNARSNSDSEASVFETDSGSSSVTGSDVSSEESSSDYSSSSESESERSRSRRKKQKRGRRKRRYSSSESSDSDSGSESESDYEDKRSRRKSRRHNRRR

Homology

[Close]

BLAST of Lag0031567 vs. NCBI nr
Match: XP_022138805.1 (zinc finger CCHC domain-containing protein 10 [Momordica charantia])

HSP 1 Score: 389.4 bits (999), Expect = 2.4e-104
Identity = 246/266 (92.48%), Postives = 253/266 (95.11%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSTGGAAAQCQKCYQVGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDLKASMSS GGAAAQCQKCYQVGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSAGGAAAQCQKCYQVGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMTVSYELDNPDSDKE-KKTEKHLKKKSKRKHRSNARSNSDSEASVF 180
           SRTQQLKNPKLRMKM+ SYELDNPDS KE KKTEKH  KKSKRKHRSNA+S SDSEASVF
Sbjct: 121 SRTQQLKNPKLRMKMSESYELDNPDSGKEKKKTEKH-SKKSKRKHRSNAKSGSDSEASVF 180

Query: 181 ETDSGSSSVTGSDVSSEESSSDYSSSSESESE-RSRSRRKKQKRGRRKRRY-SSSESSDS 240
           ETDSGSSSVTGSD SSE SSSDYSSSSESESE RSR RRKKQK+GRRKRRY SSSESSDS
Sbjct: 181 ETDSGSSSVTGSDDSSEGSSSDYSSSSESESERRSRRRRKKQKKGRRKRRYSSSSESSDS 240

Query: 241 DSGSESESDYEDKRSRRKSRRHNRRR 264
           DSGSESESD +D+RS+RKSRRH+RRR
Sbjct: 241 DSGSESESDSDDERSKRKSRRHSRRR 265

[Close]

BLAST of Lag0031567 vs. NCBI nr
Match: XP_011649249.1 (zinc finger CCHC domain-containing protein 10 [Cucumis sativus] >KGN61833.1 hypothetical protein Csa_006617 [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 7.0e-104
Identity = 238/264 (90.15%), Postives = 249/264 (94.32%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSTGGAAAQCQKCYQVGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K SMS  GGAAAQCQKCYQ+GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMTVSYELDNPDSDKEKKTEKHLKKKSKRKHRSNARSNSDSEASVFE 180
           SRTQQLKNPKLRMKM VS ELDNPD  +EKK +KH KKKSKRKHRSNA+SNSDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKSNSDSEASVFE 180

Query: 181 TDSGSSSVTGSDVSSEESSSDYSSSSESESERSRSRRKKQKRGRRKRRY-SSSESSDSDS 240
           TDSGSSSVT SD SSEESSSDYSSSSESESERSR RRKKQKRGRRKRRY SSS+SSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 241 GSESESDYEDKRSRRKSRRHNRRR 264
            SESESD +++RSRRKSRRH+R+R
Sbjct: 241 RSESESDSDNERSRRKSRRHSRKR 264

[Close]

BLAST of Lag0031567 vs. NCBI nr
Match: XP_008460988.2 (PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >XP_008460989.1 PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >KAA0045615.1 zinc finger CCHC domain-containing protein 10 [Cucumis melo var. makuwa])

HSP 1 Score: 383.3 bits (983), Expect = 1.7e-102
Identity = 236/264 (89.39%), Postives = 248/264 (93.94%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSTGGAAAQCQKCYQVGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K SMSS GGAAAQCQKCYQ+GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMTVSYELDNPDSDKEKKTEKHLKKKSKRKHRSNARSNSDSEASVFE 180
           SRTQQLKNPKLRMKM VS ELDNPD  +E+K +KH K KSKRKHRSNA+S+SDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE 180

Query: 181 TDSGSSSVTGSDVSSEESSSDYSSSSESESERSRSRRKKQKRGRRKRRY-SSSESSDSDS 240
           TDSGSSSVT SD SSEESSSDYSSSSESE ERSR RRKKQKRGRRKRRY SSS+SSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 241 GSESESDYEDKRSRRKSRRHNRRR 264
            SESESD +++RSRRKSRRH+RRR
Sbjct: 241 RSESESDSDNERSRRKSRRHSRRR 264

[Close]

BLAST of Lag0031567 vs. NCBI nr
Match: XP_022959515.1 (zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata])

HSP 1 Score: 379.0 bits (972), Expect = 3.3e-101
Identity = 240/268 (89.55%), Postives = 250/268 (93.28%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSTGGAAAQCQKCYQVGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K SMSS GGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMTVSYELDNPDS-DKEKKT-EKHLKKKSKRKHRSNARSNSDSEASV 180
           SRTQQLKNPKLRMKM VS ELDNPDS D+EKKT +K LKKKSKRKHRS  +SNSDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASV 180

Query: 181 FETDSGSSSVTGSDVSSEESSSDYSSSSESESERS--RSRRKKQKRGRRKRRY-SSSESS 240
           FETDSGSSSVTGSD SSEESSSDYSSSS+SESERS  R RRKKQKRGRRKRRY SSS+SS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 241 DSDSGSESESDYEDKRSRRKSRRHNRRR 264
           DSDSGSESESD + +RSRRKSRRH+R+R
Sbjct: 241 DSDSGSESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of Lag0031567 vs. NCBI nr
Match: KAG7013679.1 (Zinc finger CCHC domain-containing protein 10 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 375.9 bits (964), Expect = 2.8e-100
Identity = 239/268 (89.18%), Postives = 249/268 (92.91%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSTGGAAAQCQKCYQVGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K SMSS GGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMTVSYELDNPDS-DKEKKT-EKHLKKKSKRKHRSNARSNSDSEASV 180
           SRTQQLKNPKLRMKM VS ELDNPDS D+EKKT +K LKKKSKRKHRS  +SNSDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASV 180

Query: 181 FETDSGSSSVTGSDVSSEESSSDYSSSSESESERS--RSRRKKQKRGRRKRRY-SSSESS 240
           FETDSGSSSVTGSD SSEESSSDYSSSS+SESERS  R RRKKQKRGRRKRRY SSS+SS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 241 DSDSGSESESDYEDKRSRRKSRRHNRRR 264
           DSDS SESESD + +RSRRKSRRH+R+R
Sbjct: 241 DSDSESESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of Lag0031567 vs. ExPASy Swiss-Prot
Match: Q5EB97 (Zinc finger CCHC domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Zcchc10 PE=2 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 6.4e-07
Identity = 66/161 (40.99%), Postives = 86/161 (53.42%), Query Frame = 0


Query: 96  QCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMTVSYELDNPDSDKEKKTEKH 155
           +CQKC + GHWTYECK +R Y+ RPSRT +LK   L+ K     +    +++ E+KT   
Sbjct: 22  RCQKCLEFGHWTYECKGKRKYLHRPSRTAELKK-ALKEKENRLLQQSMGETNTERKT--- 81

Query: 156 LKKKSKRKHRSNARSNSDSEASVFETDSGSSSVTGSDVSSEESSSDYS-SSSESESERSR 215
             KK +R     + S+SDS AS    +S S S T +  SSE+S +D S SSS S S  S 
Sbjct: 82  --KKKRRPKSVTSTSSSDSSAS----ESSSESETSASSSSEDSDADGSLSSSSSSSAYSS 141

Query: 216 SRRKKQKRGRRKRRYSSSESSDSDSGSESESDYEDKRSRRK 256
           S               SS SS S S SES SD E  + R+K
Sbjct: 142 SSSSSSSSSSSSSDSDSSSSSSSSSSSESSSDDEPPKKRKK 172

[Close]

BLAST of Lag0031567 vs. ExPASy Swiss-Prot
Match: Q9CX48 (Zinc finger CCHC domain-containing protein 10 OS=Mus musculus OX=10090 GN=Zcchc10 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 8.3e-07
Identity = 67/166 (40.36%), Postives = 88/166 (53.01%), Query Frame = 0


Query: 96  QCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMTVSYELDNPDSDKEKKTEKH 155
           +CQKC + GHWTYECK +R Y+ RPSRT +LK      +  +  +     S  E   EK 
Sbjct: 22  RCQKCLEFGHWTYECKGKRKYLHRPSRTAELKKALKEKENRLLLQ-----SIGETNIEKK 81

Query: 156 LKKKSKRKH-RSNARSNSDSEASVFETDSGSSSVTGSDVSSEESSSD---YSSSSESESE 215
           +KKK + K   S++ S+SDS AS    +S S S T +  SSE+S SD    SSSS S S 
Sbjct: 82  IKKKKRSKSVTSSSTSSSDSSAS----ESSSESETSASSSSEDSDSDESLSSSSSSSSSS 141

Query: 216 RSRSRRKKQKRGRRKRRYSSSESSDSDSGSESESDYEDKRSRRKSR 258
              S              SSS SS S S SES SD E ++ ++K +
Sbjct: 142 ACSSSSSSSSSSSSSDSDSSSSSSSSSSSSESSSDDEPQKKKKKKK 178

[Close]

BLAST of Lag0031567 vs. ExPASy Swiss-Prot
Match: Q8TBK6 (Zinc finger CCHC domain-containing protein 10 OS=Homo sapiens OX=9606 GN=ZCCHC10 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.7e-04
Identity = 58/160 (36.25%), Postives = 81/160 (50.62%), Query Frame = 0


Query: 96  QCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMTVSYELDNPDSDKEKKTEKH 155
           +CQKC + GHWTYEC  +R Y+ RPSRT +LK      +  +  +     S  E   E+ 
Sbjct: 44  RCQKCLEFGHWTYECTGKRKYLHRPSRTAELKKALKEKENRLLLQ----QSIGETNVERK 103

Query: 156 LKKKSKRKHRSNARSNSDSEASVFETDSGSSSVTGSDVSSEESSSDYSSSSESESERSRS 215
            KKK  +   S++ S+SDS AS     S  S  T +  SSE+S +D SSSS S S  S +
Sbjct: 104 AKKKRSKSVTSSSSSSSDSSAS---DSSSESEETSTSSSSEDSDTDESSSSSSSSASSTT 163

Query: 216 RRKKQKRGRRKRRYSSSESSDSDSGSESESDYEDKRSRRK 256
                          SS SS S + ++S SD E  + ++K
Sbjct: 164 SSSSSDSDS-----DSSSSSSSSTSTDSSSDDEPPKKKKK 191

[Close]

BLAST of Lag0031567 vs. ExPASy TrEMBL
Match: A0A6J1CAJ2 (zinc finger CCHC domain-containing protein 10 OS=Momordica charantia OX=3673 GN=LOC111009881 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 1.2e-104
Identity = 246/266 (92.48%), Postives = 253/266 (95.11%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSTGGAAAQCQKCYQVGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDLKASMSS GGAAAQCQKCYQVGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSAGGAAAQCQKCYQVGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMTVSYELDNPDSDKE-KKTEKHLKKKSKRKHRSNARSNSDSEASVF 180
           SRTQQLKNPKLRMKM+ SYELDNPDS KE KKTEKH  KKSKRKHRSNA+S SDSEASVF
Sbjct: 121 SRTQQLKNPKLRMKMSESYELDNPDSGKEKKKTEKH-SKKSKRKHRSNAKSGSDSEASVF 180

Query: 181 ETDSGSSSVTGSDVSSEESSSDYSSSSESESE-RSRSRRKKQKRGRRKRRY-SSSESSDS 240
           ETDSGSSSVTGSD SSE SSSDYSSSSESESE RSR RRKKQK+GRRKRRY SSSESSDS
Sbjct: 181 ETDSGSSSVTGSDDSSEGSSSDYSSSSESESERRSRRRRKKQKKGRRKRRYSSSSESSDS 240

Query: 241 DSGSESESDYEDKRSRRKSRRHNRRR 264
           DSGSESESD +D+RS+RKSRRH+RRR
Sbjct: 241 DSGSESESDSDDERSKRKSRRHSRRR 265

[Close]

BLAST of Lag0031567 vs. ExPASy TrEMBL
Match: A0A0A0LJ33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249870 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 3.4e-104
Identity = 238/264 (90.15%), Postives = 249/264 (94.32%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSTGGAAAQCQKCYQVGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K SMS  GGAAAQCQKCYQ+GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMTVSYELDNPDSDKEKKTEKHLKKKSKRKHRSNARSNSDSEASVFE 180
           SRTQQLKNPKLRMKM VS ELDNPD  +EKK +KH KKKSKRKHRSNA+SNSDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKSNSDSEASVFE 180

Query: 181 TDSGSSSVTGSDVSSEESSSDYSSSSESESERSRSRRKKQKRGRRKRRY-SSSESSDSDS 240
           TDSGSSSVT SD SSEESSSDYSSSSESESERSR RRKKQKRGRRKRRY SSS+SSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 241 GSESESDYEDKRSRRKSRRHNRRR 264
            SESESD +++RSRRKSRRH+R+R
Sbjct: 241 RSESESDSDNERSRRKSRRHSRKR 264

[Close]

BLAST of Lag0031567 vs. ExPASy TrEMBL
Match: A0A1S3CDQ2 (zinc finger CCHC domain-containing protein 10 OS=Cucumis melo OX=3656 GN=LOC103499707 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 8.4e-103
Identity = 236/264 (89.39%), Postives = 248/264 (93.94%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSTGGAAAQCQKCYQVGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K SMSS GGAAAQCQKCYQ+GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMTVSYELDNPDSDKEKKTEKHLKKKSKRKHRSNARSNSDSEASVFE 180
           SRTQQLKNPKLRMKM VS ELDNPD  +E+K +KH K KSKRKHRSNA+S+SDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE 180

Query: 181 TDSGSSSVTGSDVSSEESSSDYSSSSESESERSRSRRKKQKRGRRKRRY-SSSESSDSDS 240
           TDSGSSSVT SD SSEESSSDYSSSSESE ERSR RRKKQKRGRRKRRY SSS+SSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 241 GSESESDYEDKRSRRKSRRHNRRR 264
            SESESD +++RSRRKSRRH+RRR
Sbjct: 241 RSESESDSDNERSRRKSRRHSRRR 264

[Close]

BLAST of Lag0031567 vs. ExPASy TrEMBL
Match: A0A5A7TW64 (Zinc finger CCHC domain-containing protein 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001260 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 8.4e-103
Identity = 236/264 (89.39%), Postives = 248/264 (93.94%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSTGGAAAQCQKCYQVGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K SMSS GGAAAQCQKCYQ+GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMTVSYELDNPDSDKEKKTEKHLKKKSKRKHRSNARSNSDSEASVFE 180
           SRTQQLKNPKLRMKM VS ELDNPD  +E+K +KH K KSKRKHRSNA+S+SDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE 180

Query: 181 TDSGSSSVTGSDVSSEESSSDYSSSSESESERSRSRRKKQKRGRRKRRY-SSSESSDSDS 240
           TDSGSSSVT SD SSEESSSDYSSSSESE ERSR RRKKQKRGRRKRRY SSS+SSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 241 GSESESDYEDKRSRRKSRRHNRRR 264
            SESESD +++RSRRKSRRH+RRR
Sbjct: 241 RSESESDSDNERSRRKSRRHSRRR 264

[Close]

BLAST of Lag0031567 vs. ExPASy TrEMBL
Match: A0A6J1H6H5 (zinc finger CCHC domain-containing protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111460472 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.6e-101
Identity = 240/268 (89.55%), Postives = 250/268 (93.28%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSTGGAAAQCQKCYQVGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKD+K SMSS GGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMTVSYELDNPDS-DKEKKT-EKHLKKKSKRKHRSNARSNSDSEASV 180
           SRTQQLKNPKLRMKM VS ELDNPDS D+EKKT +K LKKKSKRKHRS  +SNSDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASV 180

Query: 181 FETDSGSSSVTGSDVSSEESSSDYSSSSESESERS--RSRRKKQKRGRRKRRY-SSSESS 240
           FETDSGSSSVTGSD SSEESSSDYSSSS+SESERS  R RRKKQKRGRRKRRY SSS+SS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 241 DSDSGSESESDYEDKRSRRKSRRHNRRR 264
           DSDSGSESESD + +RSRRKSRRH+R+R
Sbjct: 241 DSDSGSESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of Lag0031567 vs. TAIR 10
Match: AT5G49400.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 262.7 bits (670), Expect = 3.2e-70
Identity = 185/283 (65.37%), Postives = 214/283 (75.62%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MS+ K+EKSQ AA+RIKAA L+AAKGLSR QAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSNSKDEKSQDAADRIKAATLTAAKGLSRTQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSTG---GAAAQCQKCYQVGHWTYECKNERVYI 120
           E KRQMYLMSTEKAVRLGERKD   S S+ G    AA+QCQKC+Q GHWTYECKNERVYI
Sbjct: 61  ELKRQMYLMSTEKAVRLGERKDKTMSASAVGSSASAASQCQKCFQAGHWTYECKNERVYI 120

Query: 121 SRPSRTQQLKNPKLRMKMTVSYELDNPDSDKE---------KKTEKHLKKKSKRKHRSNA 180
           SRPSRTQQLKNPKLR K +V  +LD  D D E         K   +   KKSKRKHRS +
Sbjct: 121 SRPSRTQQLKNPKLRTKPSVD-DLDGSDDDDEEERPDATNGKAEVEKRSKKSKRKHRSKS 180

Query: 181 RSNSDSEASVFETDSGSSSVTGSDVSSEESSSDYSSSSESESERSR------SRRKKQKR 240
            S SDSEASVFETD        SD SS ESSS+YSSSS+SE ER R      S++K+++R
Sbjct: 181 DSESDSEASVFETD--------SDGSSGESSSEYSSSSDSEDERRRRRKAKKSKKKQKQR 240

Query: 241 GRRKRRY--SSSESSDSDSGSESESDYEDKRSRRKSRRHNRRR 264
             R+RRY  SSSESS+S+S S+S+SD +  R ++KS+RH+ +R
Sbjct: 241 KERRRRYSSSSSESSESESASDSDSDEDRSRRKKKSKRHSNKR 274

The following BLAST results are available for this feature:

BLAST of Lag0031567 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138805.1	2.4e-104	92.48	zinc finger CCHC domain-containing protein 10 [Momordica charantia]	[more]
XP_011649249.1	7.0e-104	90.15	zinc finger CCHC domain-containing protein 10 [Cucumis sativus] >KGN61833.1 hypo...	[more]
XP_008460988.2	1.7e-102	89.39	PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >XP_0084...	[more]
XP_022959515.1	3.3e-101	89.55	zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata]	[more]
KAG7013679.1	2.8e-100	89.18	Zinc finger CCHC domain-containing protein 10 [Cucurbita argyrosperma subsp. arg...	[more]

BLAST of Lag0031567 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5EB97	6.4e-07	40.99	Zinc finger CCHC domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Z...	[more]
Q9CX48	8.3e-07	40.36	Zinc finger CCHC domain-containing protein 10 OS=Mus musculus OX=10090 GN=Zcchc1...	[more]
Q8TBK6	1.7e-04	36.25	Zinc finger CCHC domain-containing protein 10 OS=Homo sapiens OX=9606 GN=ZCCHC10...	[more]

BLAST of Lag0031567 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CAJ2	1.2e-104	92.48	zinc finger CCHC domain-containing protein 10 OS=Momordica charantia OX=3673 GN=...	[more]
A0A0A0LJ33	3.4e-104	90.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249870 PE=4 SV=1	[more]
A0A1S3CDQ2	8.4e-103	89.39	zinc finger CCHC domain-containing protein 10 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5A7TW64	8.4e-103	89.39	Zinc finger CCHC domain-containing protein 10 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A6J1H6H5	1.6e-101	89.55	zinc finger CCHC domain-containing protein 10-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of Lag0031567 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49400.1	3.2e-70	65.37	zinc knuckle (CCHC-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13917	zf-CCHC_3	coord: 92..129 e-value: 6.0E-20 score: 70.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..206
IPR039715	Zinc finger CCHC domain-containing protein 10	PANTHER	PTHR13491	ZCCHC10 PROTEIN	coord: 1..253
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 88..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0031567.1	Lag0031567.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding