Lag0031564 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0031564
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrotrans_gag domain-containing protein
Locationchr11: 10096508 .. 10099569 (+)
RNA-Seq ExpressionLag0031564
SyntenyLag0031564
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCAAGAGGATTTTGCAAGACTTCATCGAAGCATGGAGAAAATGACCATGCAATTTGAGAAATTGGATGCAAGGATCAAATCCGTGGAGAAACAACCAGCCTTTCTTATCCGAAAGGAGAGATCTAATCCAATGCACCATAAGGAGTATTGGGAGGTCAAAGGAAAAGAATATGGTGGAGGTTTCCAAGCTGTCCAACGGAGAAATTCAAGAGACATTTATAAAGTTGATCCCAACTTGCGCATGAAGCCTAAACTTCCTAAATTCTATGGAAGTACAAACTCAAAGGAGTACATTCAATGGGAAAGGCAAGTTGATCATGTCTTTGATTGTTGCACTTTAAGTGAGGAGAAAAAGGTAAAACTTATTGTTTCTCATCTTAGAGATTATGTCATTACTTGGTGGGATAAATTGTTTTTGGGTAGGAGGAACCTTGAACATCCAATAGATTCATGGAATGATTTGAAGCAATTAATGCGAGAGCACTTTGTTCCTAAGCTTTTCTATAACTTGTGGACTTTGAGACAAGGGAGCAAAAGTGTGGAGGCTTACTACATGGAGATGCAAAAATTGCTTGATGAACTTGATCTTTATGAGGATGAGATGACTACCATGGCTCGTTTCTTTAGAGGACTTAATAAGGAGATTGCTGCCCTACTTGATCTTCAACTTTATGGGGATTTAGACGAGATGGTGAACTTAGCCATAAAGATTGAAAAACATCTCCAAAGGAAGTCTACAAGGTACACTAAACCTAAACCAATTTCAAATATTCATTCATCTTTGGAAAAGGTTAGTTTACCCATTAAAATACAGCCTAATATTGAGGTAGGAAGTGGTGAAATTAAAATTGAAATGCAACCAACACATGTTAATGATTTCTTGTTTAGTAGGCAATTAGATTGCAAAGACTTGTTTGATTGTAACCCTTCTACTATTGTTATACCTACTCATGATGAAGTACGTGTTGATGTGTGTGAGTTAGGGAAAAAGGCACAAAAGGCTAAGACAAAAGCATGTGAATTGATTGAAAAAGAATCTTGTGAGACAATGAGTGAAAGAGAAAAGCATGAGATTAGTTTATGGCCTAAAGAGAAAAATGAGAGAAAAGCCAAGAATATGAGTTTGTGTCAAACAGTTTGTGAGGTTAAATATGTTTTGTTTTCAAAACAAAATATTTTTGATCTTTTATACAAAAGAACTTGTTTTCCCACTGGTGAGCTCAAACCGTGTTTTTCTAGTGTTTCTCTTGAGTTCTTACAGGAAGCCAAAACAATCATTGAGAAGCTTGATTCAAAGTTCCCTTCTAAAGTCAACAATGGCAACCAACACATGAACATTAATGCCAATGCATTTCTTGAGAGGCAAAACTCCAAATTTGCTTCTAAGTTCATCCATGGCAGCACGCATAAGGTGTTCAAACCGGGTGATTGGGTTTGGAAACACTATTGGAAGGATCCTTATTCTTTTAATAAGAAACCCAAGTGGAGATCCAAAGGCGGTTTACCAATCACATCCCATGACTACAAAATTGCTCTACAAGGCGAGAGGGATGTCAGTTACATTTTCAATGCCGCTGATTTTCGTCCATTTCCCTTTTGATTTGAGGACAAATCCTCTTGAAGAAGGGGAGAATGATATGAACTCTACCAATAAAGAACTCCAATAGAGTTTAAGGTGTTGATTTCTATTATGTGTTTGAGCTTCAAGATGGAACACATTAAATGCACTCCGGGTTCATGAAAGCTGCATTTAATGCAAATCAAGCATCAATTGATGGAACTATACATTAAGCTACTTCAAGGGAAGCTTAATTAATTCATGGAATGTTACACACAAAATGAAGGTTGACCAAGACTTCCATTCTCGGATTTATGGAGTCCATCATGTAATTTTTCAGTTTTTTGAGTCTTTTCAATGTTACATAGGTTACTTTTGTTAGTGGCTCTTTAATACATTAAAGCTAGGAAGGTTACACACTTTAAGGTGACCTAGTGGCTCAATTTAGGTTATATTTTGGAGGCTATAAAAAGCCATCTTTGATGTAACACAAAATAAGATTTTGATGATGTTTCAATGAAATTGAGTCTTTTGAGCCTAAAGGCCATGAGCAACTTTCTTTGCATATCTTGTGTTTAGATTTGCATGTTAGGACCATTCAAGTAGCTTTGATCGAACTACTTGTGGAGTGATTCGAATCTCAAGCAAGCTTCTTGCCTTGAGATATTTGATCGACAAGGTAATCCGGTTTTTACTTTCCTTGGGTTGATTTTCAAATCAGTTTTGGGGTTTTCAGTTATGTGATCTAAAGGTCTTGTTTTTCAGCAAGGTTATTAGATACATTTCCTGGGAGTTTCTTATCAACCTTCTTCCCTAAAACCTTTTTTTTTTTTTTTTTTTTTGATGAATTCTTCCCTACAACCTAACTTGGTTTTTCTAAACATTTCTTCAAAAAACGAATTGACATCTCAAGCCTAACACATTTCTTACAATTACACAACCCATTAAACACAACTAATCTCAAATCTATTGAACCCTAATCAAACATACTGGTAACAAACTACACAAATTCTTTGAAAATTTAAAAGATTAACTTACCAATTTCGTTGAGAAACCACCGTGTTTGAGCTCCCCTCTTCAAACACAACTTCCTCCCCTCACCATAACCTCTTCAACTCTCACATTCTTGGTTTGCCTTCTATTTTTCTTTTTTTTGGAACTTTATGTTTTCTTCTTCCTTTTTGAGAAGCTGAACATGCAAGAAAAAAAATGGAAAGATTAGAGGAGAAAATGGAGATGGGAAGAGAAAACGACGAACCTCACTTTGTTCCGACTGCCACCCATTCCGGGTAAAGAATTCTCGCGCGTCGCCGGAGGAAAATGACCTTTCTCGTCGGAGGAAAACGAGAGCCAAGGGAAAGAAAGGCAAGGGAAGAAAAATGAAAAGGGGAAGAGAGGAAGTGAGGAAAGAAAATGAAAGGGTGTGCGATGAAATCCCCCTTATCGACGCACGGTTGCGTCGTTTCAGACAGTTTCGACGCAACGTTGCGTCAATTTAG

mRNA sequence

ATGTCTCAAGAGGATTTTGCAAGACTTCATCGAAGCATGGAGAAAATGACCATGCAATTTGAGAAATTGGATGCAAGGATCAAATCCGTGGAGAAACAACCAGCCTTTCTTATCCGAAAGGAGAGATCTAATCCAATGCACCATAAGGAGTATTGGGAGGTCAAAGGAAAAGAATATGGTGGAGGTTTCCAAGCTGTCCAACGGAGAAATTCAAGAGACATTTATAAAGTTGATCCCAACTTGCGCATGAAGCCTAAACTTCCTAAATTCTATGGAAGTACAAACTCAAAGGAGTACATTCAATGGGAAAGGCAAGTTGATCATGTCTTTGATTGTTGCACTTTAAGTGAGGAGAAAAAGGTAAAACTTATTGTTTCTCATCTTAGAGATTATGTCATTACTTGGTGGGATAAATTGTTTTTGGGTAGGAGGAACCTTGAACATCCAATAGATTCATGGAATGATTTGAAGCAATTAATGCGAGAGCACTTTGTTCCTAAGCTTTTCTATAACTTGTGGACTTTGAGACAAGGGAGCAAAAGTGTGGAGGCTTACTACATGGAGATGCAAAAATTGCTTGATGAACTTGATCTTTATGAGGATGAGATGACTACCATGGCTCGTTTCTTTAGAGGACTTAATAAGGAGATTGCTGCCCTACTTGATCTTCAACTTTATGGGGATTTAGACGAGATGGTGAACTTAGCCATAAAGATTGAAAAACATCTCCAAAGGAAGTCTACAAGGCAATTAGATTGCAAAGACTTGTTTGATTGTAACCCTTCTACTATTGTTATACCTACTCATGATGAAGAAGCCAAAACAATCATTGAGAAGCTTGATTCAAAGTTCCCTTCTAAAGTCAACAATGGCAACCAACACATGAACATTAATGCCAATGCATTTCTTGAGAGGCAAAACTCCAAATTTGCTTCTAAGTTCATCCATGGCAGCACGCATAAGGTGTTCAAACCGGGTGATTGGGTTTGGAAACACTATTGGAAGGATCCTTATTCTTTTAATAAGAAACCCAAGTGGAGATCCAAAGGCGGTTTACCAATCACATCCCATGACTACAAAATTGCTCTACAAGGCGAGAGGGATGACCATTCAAGTAGCTTTGATCGAACTACTTGTGGAGTGATTCGAATCTCAAGCAAGCTTCTTGCCTTGAGATATTTGATCGACAAGATTAGAGGAGAAAATGGAGATGGGAAGAGAAAACGACGAACCTCACTTTGTTCCGACTGCCACCCATTCCGGGTAAAGAATTCTCGCGCGTCGCCGGAGGAAAATGACCTTTCTCGTCGGAGGAAAACGAGAGCCAAGGGAAAGAAAGGCAAGGGAAGAAAAATGAAAAGGGGAAGAGAGGAAGTGAGGAAAGAAAATGAAAGGGTGTGCGATGAAATCCCCCTTATCGACGCACGGTTGCGTCGTTTCAGACAGTTTCGACGCAACGTTGCGTCAATTTAG

Coding sequence (CDS)

ATGTCTCAAGAGGATTTTGCAAGACTTCATCGAAGCATGGAGAAAATGACCATGCAATTTGAGAAATTGGATGCAAGGATCAAATCCGTGGAGAAACAACCAGCCTTTCTTATCCGAAAGGAGAGATCTAATCCAATGCACCATAAGGAGTATTGGGAGGTCAAAGGAAAAGAATATGGTGGAGGTTTCCAAGCTGTCCAACGGAGAAATTCAAGAGACATTTATAAAGTTGATCCCAACTTGCGCATGAAGCCTAAACTTCCTAAATTCTATGGAAGTACAAACTCAAAGGAGTACATTCAATGGGAAAGGCAAGTTGATCATGTCTTTGATTGTTGCACTTTAAGTGAGGAGAAAAAGGTAAAACTTATTGTTTCTCATCTTAGAGATTATGTCATTACTTGGTGGGATAAATTGTTTTTGGGTAGGAGGAACCTTGAACATCCAATAGATTCATGGAATGATTTGAAGCAATTAATGCGAGAGCACTTTGTTCCTAAGCTTTTCTATAACTTGTGGACTTTGAGACAAGGGAGCAAAAGTGTGGAGGCTTACTACATGGAGATGCAAAAATTGCTTGATGAACTTGATCTTTATGAGGATGAGATGACTACCATGGCTCGTTTCTTTAGAGGACTTAATAAGGAGATTGCTGCCCTACTTGATCTTCAACTTTATGGGGATTTAGACGAGATGGTGAACTTAGCCATAAAGATTGAAAAACATCTCCAAAGGAAGTCTACAAGGCAATTAGATTGCAAAGACTTGTTTGATTGTAACCCTTCTACTATTGTTATACCTACTCATGATGAAGAAGCCAAAACAATCATTGAGAAGCTTGATTCAAAGTTCCCTTCTAAAGTCAACAATGGCAACCAACACATGAACATTAATGCCAATGCATTTCTTGAGAGGCAAAACTCCAAATTTGCTTCTAAGTTCATCCATGGCAGCACGCATAAGGTGTTCAAACCGGGTGATTGGGTTTGGAAACACTATTGGAAGGATCCTTATTCTTTTAATAAGAAACCCAAGTGGAGATCCAAAGGCGGTTTACCAATCACATCCCATGACTACAAAATTGCTCTACAAGGCGAGAGGGATGACCATTCAAGTAGCTTTGATCGAACTACTTGTGGAGTGATTCGAATCTCAAGCAAGCTTCTTGCCTTGAGATATTTGATCGACAAGATTAGAGGAGAAAATGGAGATGGGAAGAGAAAACGACGAACCTCACTTTGTTCCGACTGCCACCCATTCCGGGTAAAGAATTCTCGCGCGTCGCCGGAGGAAAATGACCTTTCTCGTCGGAGGAAAACGAGAGCCAAGGGAAAGAAAGGCAAGGGAAGAAAAATGAAAAGGGGAAGAGAGGAAGTGAGGAAAGAAAATGAAAGGGTGTGCGATGAAATCCCCCTTATCGACGCACGGTTGCGTCGTTTCAGACAGTTTCGACGCAACGTTGCGTCAATTTAG

Protein sequence

MSQEDFARLHRSMEKMTMQFEKLDARIKSVEKQPAFLIRKERSNPMHHKEYWEVKGKEYGGGFQAVQRRNSRDIYKVDPNLRMKPKLPKFYGSTNSKEYIQWERQVDHVFDCCTLSEEKKVKLIVSHLRDYVITWWDKLFLGRRNLEHPIDSWNDLKQLMREHFVPKLFYNLWTLRQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEMVNLAIKIEKHLQRKSTRQLDCKDLFDCNPSTIVIPTHDEEAKTIIEKLDSKFPSKVNNGNQHMNINANAFLERQNSKFASKFIHGSTHKVFKPGDWVWKHYWKDPYSFNKKPKWRSKGGLPITSHDYKIALQGERDDHSSSFDRTTCGVIRISSKLLALRYLIDKIRGENGDGKRKRRTSLCSDCHPFRVKNSRASPEENDLSRRRKTRAKGKKGKGRKMKRGREEVRKENERVCDEIPLIDARLRRFRQFRRNVASI
Homology
BLAST of Lag0031564 vs. NCBI nr
Match: XP_022157414.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia])

HSP 1 Score: 196.8 bits (499), Expect = 4.3e-46
Identity = 119/271 (43.91%), Postives = 160/271 (59.04%), Query Frame = 0

Query: 8   RLHRSMEKMTMQFEKLDARIKS---VEKQPAFLIRKERSNPMHHKEYWE----------- 67
           R+ RSME +T +  +L+ + ++   V   P   +  E        ++WE           
Sbjct: 25  RMIRSMEALTERIGRLETQNQAEGRVPPPPXXRVMDEDEYEGDGSDHWEDDQATVLAXPR 84

Query: 68  ----------VKGKEYGGGFQAVQRRNSRDIYKVDPNL-RMKPKLPKFYGSTNSKEYIQW 127
                      +G+  G G+   QR   R   +VD NL  +K KL KFYG T+ + YIQW
Sbjct: 85  GGDXHVGXGLDRGRGRGRGYHNFQRA-PRANAQVDRNLGNIKLKLXKFYGKTDPEAYIQW 144

Query: 128 ERQVDHVFDCCTLSEEKKVKLIVSHLRDYVITWWDKLF-LGRRNLEHPIDSWNDLKQLMR 187
            ++V+ VFDC   SEEKKV+L ++  +DY +TWWDKL  + RRNLE PIDSW + K+L+R
Sbjct: 145 XKEVEFVFDCHNFSEEKKVRLCLAQFKDYAVTWWDKLMSIRRRNLEAPIDSWYEFKELLR 204

Query: 188 EHFVPKLFY-----NLWTLRQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKE 247
             FVP+ F+      L  LRQGSKSVE YY EM  L++ LDL ED    MARF  GLNKE
Sbjct: 205 RRFVPRHFHRDTAQKLQVLRQGSKSVEDYYKEMDTLMNRLDLEEDMENLMARFLNGLNKE 264

BLAST of Lag0031564 vs. NCBI nr
Match: XP_038887118.1 (uncharacterized protein K02A2.6-like [Benincasa hispida])

HSP 1 Score: 188.0 bits (476), Expect = 2.0e-43
Identity = 98/186 (52.69%), Postives = 124/186 (66.67%), Query Frame = 0

Query: 83  MKPKLPKFYGSTNSKEYIQWERQVDHVFDCCTLSEEKKVKLIVSHLRDYVITWWDKLFLG 142
           +K K+PKF+G T+ +EYI+WE++V++VF C   S+++KV+  V+  +DY  TWWDKL  G
Sbjct: 4   IKFKIPKFFGKTDPEEYIKWEKEVENVFACHNFSDKQKVRFCVAKFKDYAQTWWDKLTTG 63

Query: 143 -RRNLEHPIDSWNDLKQLMREHFVPKLF-----YNLWTLRQGSKSVEAYYMEMQKLLDEL 202
            RRNLE PI SW + K  MR+HFVP  F       L  LRQG+KSVE YY EM  L+D L
Sbjct: 64  RRRNLEAPIISWYEFKDSMRKHFVPNHFQRDMAQRLQALRQGNKSVEDYYKEMDILMDRL 123

Query: 203 DLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEMVNLAIKIEKHLQRKSTRQLDCKDL 262
           DL ED  T MARF  GLNKEIA  +DLQ Y D++EM++LAIK+EKHL  K  R    K  
Sbjct: 124 DLDEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKHLSTKRARYTSSKPS 183

BLAST of Lag0031564 vs. NCBI nr
Match: XP_023520835.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.4 bits (472), Expect = 5.8e-43
Identity = 108/263 (41.06%), Postives = 161/263 (61.22%), Query Frame = 0

Query: 3   QEDFARLHRSMEKMTMQFEKLDARIKSVEKQP---AFLIRKERSNPMHHKE------YWE 62
           Q    RL R +E++T +  +L+ + ++ ++ P         E  N  HH++      +  
Sbjct: 20  QRTMERLIRGIEELTDRIGRLEIQNQARQRIPQPTPSTDTYEGDNSDHHEDNPHAVGHGL 79

Query: 63  VKGKEYGGGFQAVQRRNSRDIYKVDPNL-RMKPKLPKFYGSTNSKEYIQWERQVDHVFDC 122
           ++G+++G  +  +Q+R   D  ++D N+  +K KLPKFYG T+ +EY+QWE+ V+ VF+C
Sbjct: 80  MRGRDHGRRYHNLQQRVPYD-DRIDRNVGSIKLKLPKFYGKTDPEEYLQWEKTVESVFNC 139

Query: 123 CTLSEEKKVKLIVSHLRDYVITWWDKLFLG-RRNLEHPIDSWNDLKQLMREHFVPKLF-- 182
              S++KKV L ++  + Y   WWDKL    RRNLE PIDSW + K+ MR+ FVP+ F  
Sbjct: 140 HNFSDKKKVLLCIAQFKQYAQIWWDKLMSSRRRNLEAPIDSWYEFKESMRKRFVPQYFQR 199

Query: 183 ---YNLWTLRQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLY 242
                L  L+QG KSVE YY EM  L+D LDL ED    MARF  GLN EIA   DLQ Y
Sbjct: 200 DMAQKLQALKQGRKSVEDYYKEMDTLMDRLDLDEDMEALMARFLNGLNTEIADKTDLQPY 259

Query: 243 GDLDEMVNLAIKIEKHLQRKSTR 250
            +++E++++AIKIE+ +QR+S R
Sbjct: 260 SNIEELLHIAIKIERQIQRRSQR 281

BLAST of Lag0031564 vs. NCBI nr
Match: XP_023553652.1 (uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.1 bits (466), Expect = 2.9e-42
Identity = 106/263 (40.30%), Postives = 160/263 (60.84%), Query Frame = 0

Query: 3   QEDFARLHRSMEKMTMQFEKLDARIKSVEKQP---AFLIRKERSNPMHHKE------YWE 62
           Q    RL R +E++T +  +L+ + ++ ++ P         E  N  HH++      +  
Sbjct: 20  QRTMKRLIRGIEELTDRIGRLEIQNQARQRIPLPAPSTDTYEGDNSDHHEDNPHAVGHGL 79

Query: 63  VKGKEYGGGFQAVQRRNSRDIYKVDPNL-RMKPKLPKFYGSTNSKEYIQWERQVDHVFDC 122
           ++G+++G  +  +Q+R   D  ++D N+  +K KLPKFYG T+ +EY++WE+ ++ VF C
Sbjct: 80  MRGRDHGRRYHNLQQRVPYD-DRIDRNVGSIKLKLPKFYGKTDPEEYLEWEKTIESVFKC 139

Query: 123 CTLSEEKKVKLIVSHLRDYVITWWDKLFLG-RRNLEHPIDSWNDLKQLMREHFVPKLF-- 182
              S++KKV L ++  + Y   WWDKL    RRNLE PIDSW + K+ MR+ FVP+ F  
Sbjct: 140 HNFSDKKKVLLCIAQFKQYAQIWWDKLMSSRRRNLEAPIDSWYEFKESMRKRFVPQYFQR 199

Query: 183 ---YNLWTLRQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLY 242
                L  L+QG KSVE YY EM  L+D LDL ED    MARF  GLN EIA   DLQ Y
Sbjct: 200 DMAQKLQALKQGRKSVEDYYKEMDTLMDRLDLDEDMEALMARFLNGLNTEIADKTDLQPY 259

Query: 243 GDLDEMVNLAIKIEKHLQRKSTR 250
            +++E++++AIKIE+ +QR+S R
Sbjct: 260 SNIEELLHIAIKIERQIQRRSQR 281

BLAST of Lag0031564 vs. NCBI nr
Match: XP_022152309.1 (uncharacterized protein LOC111020057 [Momordica charantia])

HSP 1 Score: 182.6 bits (462), Expect = 8.4e-42
Identity = 98/190 (51.58%), Postives = 127/190 (66.84%), Query Frame = 0

Query: 67  QRRNSRDIYKVDPNL-RMKPKLPKFYGSTNSKEYIQWERQVDHVFDCCTLSEEKKVKLIV 126
           QRR  R+  +VD NL  +K K+ KF+G T+ +EY+QWE +V+ VF C   SEEKK++L V
Sbjct: 55  QRRAPREEAQVDRNLGSIKLKIQKFFGKTDPEEYLQWENEVESVFVCHNFSEEKKIQLFV 114

Query: 127 SHLRDYVITWWDKLF-LGRRNLEHPIDSWNDLKQLMREHFVPKLF-----YNLWTLRQGS 186
           +  + Y  TWWDKL    RRNLE PI SW +  + ++E FVPK F       L  LRQG+
Sbjct: 115 ARFKQYAQTWWDKLMSRRRRNLEAPIVSWYEFNESLKERFVPKHFERDMAQKLQALRQGN 174

Query: 187 KSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEMVNLAIKI 246
           KSVE YY E+  L+D +DL ED    MARF   LNKEIA  +DLQ Y D++EM++LAIKI
Sbjct: 175 KSVEDYYKEIDTLMDRIDLDEDMKQLMARFLNDLNKEIADKVDLQPYFDIEEMLHLAIKI 234

Query: 247 EKHLQRKSTR 250
           E+ +QRKS R
Sbjct: 235 ERQIQRKSQR 244

BLAST of Lag0031564 vs. ExPASy TrEMBL
Match: A0A6J1DWE9 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 OS=Momordica charantia OX=3673 GN=LOC111024115 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.1e-46
Identity = 119/271 (43.91%), Postives = 160/271 (59.04%), Query Frame = 0

Query: 8   RLHRSMEKMTMQFEKLDARIKS---VEKQPAFLIRKERSNPMHHKEYWE----------- 67
           R+ RSME +T +  +L+ + ++   V   P   +  E        ++WE           
Sbjct: 25  RMIRSMEALTERIGRLETQNQAEGRVPPPPXXRVMDEDEYEGDGSDHWEDDQATVLAXPR 84

Query: 68  ----------VKGKEYGGGFQAVQRRNSRDIYKVDPNL-RMKPKLPKFYGSTNSKEYIQW 127
                      +G+  G G+   QR   R   +VD NL  +K KL KFYG T+ + YIQW
Sbjct: 85  GGDXHVGXGLDRGRGRGRGYHNFQRA-PRANAQVDRNLGNIKLKLXKFYGKTDPEAYIQW 144

Query: 128 ERQVDHVFDCCTLSEEKKVKLIVSHLRDYVITWWDKLF-LGRRNLEHPIDSWNDLKQLMR 187
            ++V+ VFDC   SEEKKV+L ++  +DY +TWWDKL  + RRNLE PIDSW + K+L+R
Sbjct: 145 XKEVEFVFDCHNFSEEKKVRLCLAQFKDYAVTWWDKLMSIRRRNLEAPIDSWYEFKELLR 204

Query: 188 EHFVPKLFY-----NLWTLRQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKE 247
             FVP+ F+      L  LRQGSKSVE YY EM  L++ LDL ED    MARF  GLNKE
Sbjct: 205 RRFVPRHFHRDTAQKLQVLRQGSKSVEDYYKEMDTLMNRLDLEEDMENLMARFLNGLNKE 264

BLAST of Lag0031564 vs. ExPASy TrEMBL
Match: A0A6J1DFN2 (uncharacterized protein LOC111020057 OS=Momordica charantia OX=3673 GN=LOC111020057 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.1e-42
Identity = 98/190 (51.58%), Postives = 127/190 (66.84%), Query Frame = 0

Query: 67  QRRNSRDIYKVDPNL-RMKPKLPKFYGSTNSKEYIQWERQVDHVFDCCTLSEEKKVKLIV 126
           QRR  R+  +VD NL  +K K+ KF+G T+ +EY+QWE +V+ VF C   SEEKK++L V
Sbjct: 55  QRRAPREEAQVDRNLGSIKLKIQKFFGKTDPEEYLQWENEVESVFVCHNFSEEKKIQLFV 114

Query: 127 SHLRDYVITWWDKLF-LGRRNLEHPIDSWNDLKQLMREHFVPKLF-----YNLWTLRQGS 186
           +  + Y  TWWDKL    RRNLE PI SW +  + ++E FVPK F       L  LRQG+
Sbjct: 115 ARFKQYAQTWWDKLMSRRRRNLEAPIVSWYEFNESLKERFVPKHFERDMAQKLQALRQGN 174

Query: 187 KSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQLYGDLDEMVNLAIKI 246
           KSVE YY E+  L+D +DL ED    MARF   LNKEIA  +DLQ Y D++EM++LAIKI
Sbjct: 175 KSVEDYYKEIDTLMDRIDLDEDMKQLMARFLNDLNKEIADKVDLQPYFDIEEMLHLAIKI 234

Query: 247 EKHLQRKSTR 250
           E+ +QRKS R
Sbjct: 235 ERQIQRKSQR 244

BLAST of Lag0031564 vs. ExPASy TrEMBL
Match: A0A2N9GNR6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31988 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.2e-39
Identity = 125/418 (29.90%), Postives = 208/418 (49.76%), Query Frame = 0

Query: 3    QEDFARLHRSMEKMTMQFEKLDARIKSVE-----KQPAFLIRKERSNPMHHKEYWEVKGK 62
            Q+ F RL+  + ++  + +  +A I++++     ++    +  E  N    ++  ++  +
Sbjct: 954  QQQFERLNFVLGEVRDRMDHQEAAIRNLQGGRDRRRRERRVENEYENEGDGEDEEDLASE 1013

Query: 63   EYGGGFQAVQRRNSRDIYK-----VDPNL-RMKPKLPKFYGSTNSKEYIQWERQVDHVFD 122
               G  + V+R    +        VD +L  +K K+P F G T+ + Y++WE+++D VFD
Sbjct: 1014 VGSGRHRRVRRERGHEWNPGGRDGVDRSLGSIKMKIPSFQGRTDPEVYLEWEKKIDLVFD 1073

Query: 123  CCTLSEEKKVKLIVSHLRDYVITWWDKLFLG-RRNLEHPIDSWNDLKQLMREHFVPKLFY 182
            C   SEEKKVKL V    DY I WWD+L    RRN E P+++W +LK LMR  FVP  FY
Sbjct: 1074 CHNYSEEKKVKLAVIEFTDYAIIWWDQLVTNRRRNNERPVETWGELKALMRRRFVPSHFY 1133

Query: 183  -----NLWTLRQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDLQL 242
                  L  L QGS+SVE Y+ EM+  +   ++ ED   TMARF  GLN++IA +++LQ 
Sbjct: 1134 RDLYQRLQNLTQGSRSVEDYHKEMEVAMIRANVEEDREATMARFLSGLNRDIANVIELQH 1193

Query: 243  YGDLDEMVNLAIKIEKHLQRKSTRQLDCKDLFDCNPSTIVIPTHDEEAKTIIEKLDSKFP 302
            Y ++++MV++A+K+E+ L+RK T     + +     +  V+   ++++  + E +D+   
Sbjct: 1194 YVEIEDMVHMAMKVERQLKRKGT----ARRVMIMRDNGEVMTESEDDSDGMPELVDASDD 1253

Query: 303  SKV-----NNGNQHMNINANAF-----------LERQNSKFA---------------SKF 362
              V      +GN    +  + F           L+RQ  +FA                  
Sbjct: 1254 DGVVYPVTGHGNLIGRVTHDGFKNRSNPEETKELQRQVEEFAEPKGEKGLAVDEEKVKAI 1313

Query: 363  IHGSTHKVFKPGDWVWKHYWKDPYSFNKKPKWRSKGGLP------ITSHDYKIALQGE 367
                T K    GDWVW H  K+ +  ++K K   +G  P      I  + +K+ L GE
Sbjct: 1314 KEWPTPKSNHRGDWVWVHMRKERFPAHRKTKLHPRGDGPFQILEKINDNAHKVDLPGE 1367

BLAST of Lag0031564 vs. ExPASy TrEMBL
Match: A0A2N9FBC2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11966 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.2e-39
Identity = 99/265 (37.36%), Postives = 157/265 (59.25%), Query Frame = 0

Query: 3   QEDFARLHRSMEKMTMQFEKLDARIKSVE-----KQPAFLIRKERSNPMHHKEYWEVKGK 62
           Q+ F RL+  + ++  + +  +A I++++     +Q    +  E  N    ++  ++  K
Sbjct: 24  QQQFERLNFVLGEVRDRMDHQEAAIRNLQGGRDRRQSELRVENEYENEGDGEDEEDLASK 83

Query: 63  EYGGGFQAVQR-------RNSRDIYKVDPNL-RMKPKLPKFYGSTNSKEYIQWERQVDHV 122
              G  +  +R       R  RD   +D NL  +K K+P F G TN + Y++WE+++D V
Sbjct: 84  VGSGRHRRFRREKGHEGNRGGRD--GLDRNLGSIKMKIPSFQGRTNPEVYLEWEKKIDLV 143

Query: 123 FDCCTLSEEKKVKLIVSHLRDYVITWWDKLFLG-RRNLEHPIDSWNDLKQLMREHFVPKL 182
           FDC   SEEKK+KL V    DY I WWD+L    RRN E P+++W +LK LMR  FVP  
Sbjct: 144 FDCHNYSEEKKMKLAVIEFTDYAIIWWDQLMTNRRRNNERPVETWGELKALMRRRFVPSH 203

Query: 183 FY-----NLWTLRQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLDL 242
           FY      L  L QGS+SVE Y+ EM+  + + ++ ED   TMARFF GLN++IA +++L
Sbjct: 204 FYRDLYQKLQNLTQGSRSVEDYHKEMEVAMIQANVEEDREATMARFFSGLNRDIANVIEL 263

Query: 243 QLYGDLDEMVNLAIKIEKHLQRKST 249
           Q Y ++++M+++A+K+E+ L+RK T
Sbjct: 264 QHYVEIEDMMHMAMKVERQLKRKGT 286

BLAST of Lag0031564 vs. ExPASy TrEMBL
Match: A0A2N9HDW6 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40408 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-38
Identity = 99/266 (37.22%), Postives = 158/266 (59.40%), Query Frame = 0

Query: 3   QEDFARLHRSMEKMTMQFEKLDARIKSVE-------KQPAFLIRKERSNPMHHKEYWEVK 62
           Q+ F RL+  + ++  + +  +A I++++       ++P   +  E  N    ++  +++
Sbjct: 24  QQQFERLNFVLGEVRDRMDHQEAAIRNLQGGRDRRRREPR--VENEYENEGDGEDEEDLE 83

Query: 63  GKEYGGGFQAVQRR-------NSRDIYKVDPNL-RMKPKLPKFYGSTNSKEYIQWERQVD 122
            +   G  + V+R          RD   VD NL  +K K+P F G T+ + Y++WE+++D
Sbjct: 84  SEIGSGRHRRVRRERGLKGNLGGRD--GVDRNLGSIKMKIPSFQGRTDPEVYLEWEKKID 143

Query: 123 HVFDCCTLSEEKKVKLIVSHLRDYVITWWDKLFLGRRNLEHPIDSWNDLKQLMREHFVPK 182
            VFDC T SEEKKVKL V    DY I WWD+L   RRN E PI++W +LK LMR  F+P 
Sbjct: 144 LVFDCHTYSEEKKVKLTVIEFTDYAIIWWDQLVTNRRNNERPIETWGELKALMRRRFIPS 203

Query: 183 LFY-----NLWTLRQGSKSVEAYYMEMQKLLDELDLYEDEMTTMARFFRGLNKEIAALLD 242
            FY      L  L QGS+SVE Y+ EM+  +   ++ ED   TMARF  GLN++IA +++
Sbjct: 204 HFYRDFYQKLQNLTQGSRSVEDYHKEMEVAMIRANVEEDREATMARFLSGLNRDIANVIE 263

Query: 243 LQLYGDLDEMVNLAIKIEKHLQRKST 249
           LQ Y ++++MV++A+K+E+ L++K T
Sbjct: 264 LQHYMEIEDMVHMAMKVERQLKKKGT 285

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022157414.14.3e-4643.91LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia][more]
XP_038887118.12.0e-4352.69uncharacterized protein K02A2.6-like [Benincasa hispida][more]
XP_023520835.15.8e-4341.06LOW QUALITY PROTEIN: uncharacterized protein LOC111784339 [Cucurbita pepo subsp.... [more]
XP_023553652.12.9e-4240.30uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo][more]
XP_022152309.18.4e-4251.58uncharacterized protein LOC111020057 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DWE92.1e-4643.91LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 OS=Momordica charantia... [more]
A0A6J1DFN24.1e-4251.58uncharacterized protein LOC111020057 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A2N9GNR63.2e-3929.90Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31988 PE=4 SV=1[more]
A0A2N9FBC27.2e-3937.36Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11966 PE=4 SV=1[more]
A0A2N9HDW61.6e-3837.22Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..33
NoneNo IPR availableCOILSCoilCoilcoord: 182..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 439..454
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 425..460
NoneNo IPR availablePANTHERPTHR35046:SF6ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEINcoord: 53..275
NoneNo IPR availablePANTHERPTHR35046ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEINcoord: 53..275
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 122..214
e-value: 5.5E-15
score: 55.4

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0031564.1Lag0031564.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding