Lag0031561 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0031561
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	GTP-binding protein SAR1A
Location	chr11: 10051212 .. 10053022 (-)
RNA-Seq Expression	Lag0031561
Synteny	Lag0031561

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCTCGTCGATTGGTTCTACGGCGTCTTAGCATCGCTCGGCCTCTGGCAGAAAGAGGCCAAAATTCTCTTCCTCGGCCTCGATAATGCCGGCAAGACCACTCTCCTTCACATGTTGAAGGACGAGGTGAGTTTCATTTCTTTTTCTTAACTCTGCAATTGAATTTTGCTCGTTGATTTTTTGATTCCTTATGGAAATTTTGAGTTGCGTGTAGAGATTAGTGCAACACCAGCCGACTCAACACCCGACCTCAGAGGAGTTGAGTATTGGGAAAATCAAATTCAAGGCTTTTGATCTTGGAGGCCACCAGATCGCTCGCAGAGTCTGGAAAGATTATTATGCCAAGGTGAACTTTATTTCATTTTTGGTTAATTTCTGATTGCATTTCGTCTGTGTAACCATGAATTGGCTTGATGATTTTCTTTGTCTTGAAATTGTCGATACTTTGATCTTTTCAATTAGATTTAGATGCCATCCTCTTTTCTTTGTTTGGTCTCAACTCAATGAAATTTTCCTCAACGACGGCTGTTATTATTGATCTTCCGTTTTGAATTGAAGACTGATTGGAACTATGATGTATAGTTTGTTTATTATTGATTTGATGGTTGTTGGAGTTTTCTTCTTGTCAAGCCCACCTGATGCCTTGTGCTTCATTGTAAGATTTAGACGTTGGTTTCAATCTTCTGCAGCAGTAGTTGACTTTTCAAGCTGAAGCTTTTTGAATAAGGAACCTCCTTTAATTTCCTAAATATGAATTTAATGACTCTTAAGTTCTATGGAAGTTCCCGTTTTCATGTTTCAAGAGCTCCCACATTGTCATACTTCTCTGATTCAGAAACAAAAACGAAAGTTGCTAATTCATTCTATTTTCTGAATCTATTCAGATCCTGCTCTCATGAAATGAATTTCTGGGCATACTTTTCATTGAACTTGAATATGAGAGTGTGCAAAAACCTACCCGATTTCCCTCCCACTCTATAGCTTTTGTTGAATAAAAGCATTGGCAAATTGTATTCTTGTAACGACCCCTTTTAAGGGTGCTCCTAGTGTAATATTTCTATTGAAACAGTTAAGTGTAGCCAAGGGAAAAGGAACCGCTACCTTCTCAATCACAAATTTATTGACATAGCTGTAAATTGTGCATTTTGGTTCATGCTGTCATGATCCATCAAATCCTTCCATAATTCAAAGTAAATATTTGACTGTTGAAAGTTGAAATCCTTTTAGATTTCCCTGGTGTGATGAAAACCAGAAGTCATTTCAAGATCTGATCTTAATTCTTATCCAATTTCATGATCTTCCCTGCTTACTTGGTTCTTCTAGTTCTAATATTCTTGTTGTAACTATTGGAAGTTGAATAACATTTCTAATCCTGAGTTTGTCACAATTTATGGCTTCTGAATTCCGTTTGTGCTAGCATAGTCCCTTCTCTGCTTGTGTTAATGTGAGGATGTCTGCACAATATAACATGTTGCATAAATGATTAGGTTGATGCAGTAGTGTACCTGGTTGATGCCTATGACAAAGAGAGGTTTGTCGAATCAAAGAAGGAGCTCGATGCGCTCCTCTCGGACGAAGCGCTGGCTGATGTTCCATTCCTTGTGCTTGGAAACAAGATTGACATCCCCTATGCAGCTTCTGAGGATGAGCTAAGATTTCACCTGGGCTTGAGCAATTTCACAACTGGCAAGGGAAAGGTTAGTCTTACTCAGACTAATGTTCGACCGCTCGAGGTTTTTATGTGTAGCATAGTCCGGAAGATGGGTTATGGCGATGGGTTCAAATGGCTCTCTCAGTATATCAAGTAG

mRNA sequence

ATGTTTCTCGTCGATTGGTTCTACGGCGTCTTAGCATCGCTCGGCCTCTGGCAGAAAGAGGCCAAAATTCTCTTCCTCGGCCTCGATAATGCCGGCAAGACCACTCTCCTTCACATGTTGAAGGACGAGAGATTAGTGCAACACCAGCCGACTCAACACCCGACCTCAGAGGAGTTGAGTATTGGGAAAATCAAATTCAAGGCTTTTGATCTTGGAGGCCACCAGATCGCTCGCAGAGTCTGGAAAGATTATTATGCCAAGGTTGATGCAGTAGTGTACCTGGTTGATGCCTATGACAAAGAGAGGTTTGTCGAATCAAAGAAGGAGCTCGATGCGCTCCTCTCGGACGAAGCGCTGGCTGATGTTCCATTCCTTGTGCTTGGAAACAAGATTGACATCCCCTATGCAGCTTCTGAGGATGAGCTAAGATTTCACCTGGGCTTGAGCAATTTCACAACTGGCAAGGGAAAGGTTAGTCTTACTCAGACTAATGTTCGACCGCTCGAGGTTTTTATGTGTAGCATAGTCCGGAAGATGGGTTATGGCGATGGGTTCAAATGGCTCTCTCAGTATATCAAGTAG

Coding sequence (CDS)

ATGTTTCTCGTCGATTGGTTCTACGGCGTCTTAGCATCGCTCGGCCTCTGGCAGAAAGAGGCCAAAATTCTCTTCCTCGGCCTCGATAATGCCGGCAAGACCACTCTCCTTCACATGTTGAAGGACGAGAGATTAGTGCAACACCAGCCGACTCAACACCCGACCTCAGAGGAGTTGAGTATTGGGAAAATCAAATTCAAGGCTTTTGATCTTGGAGGCCACCAGATCGCTCGCAGAGTCTGGAAAGATTATTATGCCAAGGTTGATGCAGTAGTGTACCTGGTTGATGCCTATGACAAAGAGAGGTTTGTCGAATCAAAGAAGGAGCTCGATGCGCTCCTCTCGGACGAAGCGCTGGCTGATGTTCCATTCCTTGTGCTTGGAAACAAGATTGACATCCCCTATGCAGCTTCTGAGGATGAGCTAAGATTTCACCTGGGCTTGAGCAATTTCACAACTGGCAAGGGAAAGGTTAGTCTTACTCAGACTAATGTTCGACCGCTCGAGGTTTTTATGTGTAGCATAGTCCGGAAGATGGGTTATGGCGATGGGTTCAAATGGCTCTCTCAGTATATCAAGTAG

Protein sequence

MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFVESKKELDALLSDEALADVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVSLTQTNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK

Homology

[Close]

BLAST of Lag0031561 vs. NCBI nr
Match: XP_023006409.1 (GTP-binding protein SAR1A-like [Cucurbita maxima])

HSP 1 Score: 391.0 bits (1003), Expect = 6.1e-105
Identity = 189/193 (97.93%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFVESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERF+ESKKELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFIESKKELDALLSDEALA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVSLTQTNVRPLEVFMCSIVRKMG 180
           DVPFL+LGNKIDIPYAASEDELRFHLGL+NFTTGKGKV+LTQTNVRPLEVFMCSIVRKMG
Sbjct: 121 DVPFLLLGNKIDIPYAASEDELRFHLGLTNFTTGKGKVNLTQTNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YGDGFKWLSQYIK
Sbjct: 181 YGDGFKWLSQYIK 193

[Close]

BLAST of Lag0031561 vs. NCBI nr
Match: XP_004151083.1 (GTP-binding protein SAR1A [Cucumis sativus] >XP_008458372.1 PREDICTED: GTP-binding protein SAR1A-like [Cucumis melo] >KGN47389.1 hypothetical protein Csa_022932 [Cucumis sativus] >TYK02944.1 GTP-binding protein SAR1A [Cucumis melo var. makuwa])

HSP 1 Score: 391.0 bits (1003), Expect = 6.1e-105
Identity = 190/193 (98.45%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFVESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERF ESKKELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVSLTQTNVRPLEVFMCSIVRKMG 180
           DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKV+LTQTNVRPLEV+MCSIVRKMG
Sbjct: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVNLTQTNVRPLEVYMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YGDGFKWLSQYIK
Sbjct: 181 YGDGFKWLSQYIK 193

[Close]

BLAST of Lag0031561 vs. NCBI nr
Match: XP_022930214.1 (GTP-binding protein SAR1A-like [Cucurbita moschata] >XP_023000052.1 GTP-binding protein SAR1A-like [Cucurbita maxima] >XP_023514067.1 GTP-binding protein SAR1A-like [Cucurbita pepo subsp. pepo] >KAG6594006.1 GTP-binding protein SAR1A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026346.1 GTP-binding protein SAR1A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 391.0 bits (1003), Expect = 6.1e-105
Identity = 191/193 (98.96%), Postives = 191/193 (98.96%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFVESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERF ESKKELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVSLTQTNVRPLEVFMCSIVRKMG 180
           DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKV LTQTNVRPLEVFMCSIVRKMG
Sbjct: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVILTQTNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YGDGFKWLSQYIK
Sbjct: 181 YGDGFKWLSQYIK 193

[Close]

BLAST of Lag0031561 vs. NCBI nr
Match: XP_022959076.1 (GTP-binding protein SAR1A-like [Cucurbita moschata] >XP_023547808.1 GTP-binding protein SAR1A-like [Cucurbita pepo subsp. pepo] >KAG6575105.1 GTP-binding protein SAR1A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013673.1 GTP-binding protein SAR1A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 389.8 bits (1000), Expect = 1.4e-104
Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFVESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERF ESKKELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFTESKKELDALLSDEALA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVSLTQTNVRPLEVFMCSIVRKMG 180
           DVPFL+LGNKIDIPYAASEDELRFHLGL+NFTTGKGKV+LTQTNVRPLEVFMCSIVRKMG
Sbjct: 121 DVPFLLLGNKIDIPYAASEDELRFHLGLTNFTTGKGKVNLTQTNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YGDGFKWLSQYIK
Sbjct: 181 YGDGFKWLSQYIK 193

[Close]

BLAST of Lag0031561 vs. NCBI nr
Match: XP_038906951.1 (GTP-binding protein SAR1A-like [Benincasa hispida])

HSP 1 Score: 389.8 bits (1000), Expect = 1.4e-104
Identity = 188/193 (97.41%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFVESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERF+ESKKELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFIESKKELDALLSDEALA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVSLTQTNVRPLEVFMCSIVRKMG 180
           DVPFLVLGNKIDIPYAASEDELR+HLGL+NFTTGKGKV+LTQTNVRPLEV+MCSIVRKMG
Sbjct: 121 DVPFLVLGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTQTNVRPLEVYMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YGDGFKWLSQYIK
Sbjct: 181 YGDGFKWLSQYIK 193

[Close]

BLAST of Lag0031561 vs. ExPASy Swiss-Prot
Match: O04834 (GTP-binding protein SAR1A OS=Arabidopsis thaliana OX=3702 GN=SAR1A PE=2 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 1.8e-104
Identity = 181/193 (93.78%), Postives = 190/193 (98.45%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MF++DWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFMIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFVESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERF ESKKELDALLSDE+LA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVSLTQTNVRPLEVFMCSIVRKMG 180
            VPFL+LGNKIDIPYAASEDELR+HLGLSNFTTGKGKV+LT +NVRPLEVFMCSIVRKMG
Sbjct: 121 SVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVNLTDSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YG+GFKW+SQYIK
Sbjct: 181 YGEGFKWVSQYIK 193

[Close]

BLAST of Lag0031561 vs. ExPASy Swiss-Prot
Match: O04266 (GTP-binding protein SAR1A OS=Brassica campestris OX=3711 GN=SAR1A PE=2 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 1.2e-103
Identity = 181/193 (93.78%), Postives = 188/193 (97.41%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MF++DWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFVIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFVESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERF ESKKELDALLSDE+LA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVSLTQTNVRPLEVFMCSIVRKMG 180
            VPFL+LGNKIDIPYAASEDELR+HLGLSNFTTGKGKV L  +NVRPLEVFMCSIVRKMG
Sbjct: 121 TVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVDLVGSNVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YG+GFKWLSQYIK
Sbjct: 181 YGEGFKWLSQYIK 193

[Close]

BLAST of Lag0031561 vs. ExPASy Swiss-Prot
Match: Q01474 (GTP-binding protein SAR1B OS=Arabidopsis thaliana OX=3702 GN=SAR1B PE=1 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 6.6e-102
Identity = 178/192 (92.71%), Postives = 186/192 (96.88%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFL DWFYG+LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFVESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERF ESK+ELDALLSDEALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVSLTQTNVRPLEVFMCSIVRKMG 180
            VPFL+LGNKIDIPYAASEDELR+HLGL+NFTTGKGKV+L  + VRPLEVFMCSIVRKMG
Sbjct: 121 TVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVTLGDSGVRPLEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYI 193
           YG+GFKWLSQYI
Sbjct: 181 YGEGFKWLSQYI 192

[Close]

BLAST of Lag0031561 vs. ExPASy Swiss-Prot
Match: O04267 (GTP-binding protein SAR1B OS=Brassica campestris OX=3711 GN=SAR1B PE=2 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 5.2e-99
Identity = 176/194 (90.72%), Postives = 184/194 (94.85%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFL DWFYG+LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS
Sbjct: 1   MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFVESKKELDALLSDEALA 120
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERF ESKKELDALLSD+ALA
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDALA 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVSLT--QTNVRPLEVFMCSIVRK 180
            VPFL+LGNKID PYAASEDELR+HLGL+NFTTGKGKV+     + VRPLEVFMCSIVRK
Sbjct: 121 TVPFLILGNKIDNPYAASEDELRYHLGLTNFTTGKGKVTTAGGDSGVRPLEVFMCSIVRK 180

Query: 181 MGYGDGFKWLSQYI 193
           MGYG+GFKWLSQYI
Sbjct: 181 MGYGEGFKWLSQYI 194

[Close]

BLAST of Lag0031561 vs. ExPASy Swiss-Prot
Match: P52884 (GTP-binding protein SAR2 OS=Solanum lycopersicum OX=4081 GN=SAR2 PE=2 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 4.9e-97
Identity = 168/193 (87.05%), Postives = 183/193 (94.82%), Query Frame = 0


Query: 1   MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELS 60
           MFLVDWFYGVLASLGLWQK+AKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEELS
Sbjct: 1   MFLVDWFYGVLASLGLWQKDAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFVESKKELDALLSDEALA 120
           IG IKFKAFDLGGHQIARRVW+DYYAKVDAVVYLVDA D+ERF E+KKELD LLSDE+L 
Sbjct: 61  IGNIKFKAFDLGGHQIARRVWRDYYAKVDAVVYLVDANDRERFPEAKKELDGLLSDESLT 120

Query: 121 DVPFLVLGNKIDIPYAASEDELRFHLGLSNFTTGKGKVSLTQTNVRPLEVFMCSIVRKMG 180
           +VPFL+LGNKIDIPYAASEDELR+HLGL+  TTGKG ++L  TNVRP+EVFMCSIVRKMG
Sbjct: 121 NVPFLILGNKIDIPYAASEDELRYHLGLTGVTTGKGNINLAGTNVRPIEVFMCSIVRKMG 180

Query: 181 YGDGFKWLSQYIK 194
           YG+GFKW+SQYIK
Sbjct: 181 YGEGFKWMSQYIK 193

The following BLAST results are available for this feature:

BLAST of Lag0031561 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023006409.1	6.1e-105	97.93	GTP-binding protein SAR1A-like [Cucurbita maxima]	[more]
XP_004151083.1	6.1e-105	98.45	GTP-binding protein SAR1A [Cucumis sativus] >XP_008458372.1 PREDICTED: GTP-bindi...	[more]
XP_022930214.1	6.1e-105	98.96	GTP-binding protein SAR1A-like [Cucurbita moschata] >XP_023000052.1 GTP-binding ...	[more]
XP_022959076.1	1.4e-104	97.93	GTP-binding protein SAR1A-like [Cucurbita moschata] >XP_023547808.1 GTP-binding ...	[more]
XP_038906951.1	1.4e-104	97.41	GTP-binding protein SAR1A-like [Benincasa hispida]	[more]

BLAST of Lag0031561 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04834	1.8e-104	93.78	GTP-binding protein SAR1A OS=Arabidopsis thaliana OX=3702 GN=SAR1A PE=2 SV=1	[more]
O04266	1.2e-103	93.78	GTP-binding protein SAR1A OS=Brassica campestris OX=3711 GN=SAR1A PE=2 SV=1	[more]
Q01474	6.6e-102	92.71	GTP-binding protein SAR1B OS=Arabidopsis thaliana OX=3702 GN=SAR1B PE=1 SV=1	[more]
O04267	5.2e-99	90.72	GTP-binding protein SAR1B OS=Brassica campestris OX=3711 GN=SAR1B PE=2 SV=1	[more]
P52884	4.9e-97	87.05	GTP-binding protein SAR2 OS=Solanum lycopersicum OX=4081 GN=SAR2 PE=2 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006689	Small GTPase superfamily, ARF/SAR type	PRINTS	PR00328	SAR1GTPBP	coord: 50..74 score: 87.76 coord: 122..143 score: 86.1 coord: 22..45 score: 94.61 coord: 77..102 score: 83.94 coord: 166..190 score: 81.88
IPR006689	Small GTPase superfamily, ARF/SAR type	SMART	SM00178	sar_sub_1	coord: 4..192 e-value: 9.9E-132 score: 453.6
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 8..192 e-value: 6.0E-66 score: 221.2
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 4..193 e-value: 2.7E-18 score: 76.8
None	No IPR available	PANTHER	PTHR45684:SF32	PROTEIN SAR1A, PUTATIVE, EXPRESSED-RELATED	coord: 1..193
None	No IPR available	PROSITE	PS51417	ARF	coord: 14..192 score: 15.646679
None	No IPR available	PROSITE	PS51422	SAR1	coord: 14..192 score: 30.045395
None	No IPR available	CDD	cd00879	Sar1	coord: 2..192 e-value: 1.73573E-131 score: 364.677
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 19..141 e-value: 5.9E-16 score: 56.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..193 e-value: 2.9E-76 score: 257.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 17..192
IPR006687	Small GTPase superfamily, SAR1-type	PANTHER	PTHR45684	RE74312P	coord: 1..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0031561.1	Lag0031561.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070863	positive regulation of protein exit from endoplasmic reticulum
biological_process	GO:0003400	regulation of COPII vesicle coating
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0030127	COPII vesicle coat
cellular_component	GO:0070971	endoplasmic reticulum exit site
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding