Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGTGCCGAGCAAAGTTAAGGTTTTTGTATGGAAATCGTATCATGATTCTATACCGACAGTGGTCAATCTTCGAAACCATCATGTCCCGACTGGTGGTATTTGTCCTCTCTGTCAAGAAGAAATGGAGACTACTGATCATGCCCTATTTCGGTGTGTTAGGGCGAGTGAGGTTTGGGAAAGATTGATTCCTATGATGGTTGGTCGAAACTCATGTTACTCCAACATCAAAGATAGATGGCAGGAGCTGGCTGATGGTCAGGTGCAGGACCAAGAGTATTTTTGTGTGGGTGCATGGCCTATTTGGAATGATAGAAATAGTTGGATTCATAAGCGGCCTATCTCGGATGTAGGGACGCGCTGTGATGGGATTATTGAATATTTAGCTGATTATAAAAGGGTCAATCCGAAAGCGAATGCTCTCACCCAAGATGAACAAGATATTCGAGATATCATCTCAAAGGGCGAAGATTTCATATTACATTCTGATGCAGCCTTTAAAGGAAAGAATCAACCGAGCGGGGTTGGTTTAGTACTTCGAGATAAATCTGGCATTTTAAAAGCAGCTCAAATTTTGTGCCCTTCGGGGTGTTCTTCTCCTTTAGCGGCGGAAGCGGTCGAGGTTTTAGAAGGCTTACGTTTGGCACGGTCTCTGGAAGTGCAGAAATTAACGATCCTATATGATTCTCTTTCGTTAATACAATATCTAAATGACGACCAACAGTGTGATTCCAGAATAGCAACAACAATGTGGGATATAGGGGATATCAAACGTTCCTTCATCAAAGTGAGCTTTCAATTTGTTAATCGTCGTTTTAATGCTTTTGCTCATAATTTAGCCCGTGAAGGCCTTTCTTATGTAACACCACTCCTGTGGAAACAATATTATCCTGAGTGGATACTTAGTTTATTGTTCAAAGAGCGAAATCTGTTTGTATCCCTGGGGTCCGGTGCTTTTTAA
mRNA sequence
ATGACGGTGCCGAGCAAAGTTAAGGTTTTTGTATGGAAATCGTATCATGATTCTATACCGACAGTGGTCAATCTTCGAAACCATCATGTCCCGACTGGTGGTATTTGTCCTCTCTGTCAAGAAGAAATGGAGACTACTGATCATGCCCTATTTCGGTGTGTTAGGGCGAGTGAGGTTTGGGAAAGATTGATTCCTATGATGGTTGGTCGAAACTCATGTTACTCCAACATCAAAGATAGATGGCAGGAGCTGGCTGATGGTCAGGTGCAGGACCAAGAGTATTTTTGTGTGGGTGCATGGCCTATTTGGAATGATAGAAATAGTTGGATTCATAAGCGGCCTATCTCGGATGTAGGGACGCGCTGTGATGGGATTATTGAATATTTAGCTGATTATAAAAGGGTCAATCCGAAAGCGAATGCTCTCACCCAAGATGAACAAGATATTCGAGATATCATCTCAAAGGGCGAAGATTTCATATTACATTCTGATGCAGCCTTTAAAGGAAAGAATCAACCGAGCGGGGTTGGTTTAGTACTTCGAGATAAATCTGGCATTTTAAAAGCAGCTCAAATTTTGTGCCCTTCGGGGTGTTCTTCTCCTTTAGCGGCGGAAGCGGTCGAGGTTTTAGAAGGCTTACGTTTGGCACGGTCTCTGGAAGTGCAGAAATTAACGATCCTATATGATTCTCTTTCGTTAATACAATATCTAAATGACGACCAACAGTGTGATTCCAGAATAGCAACAACAATGTGGGATATAGGGGATATCAAACGTTCCTTCATCAAAGTGAGCTTTCAATTTGTTAATCGTCGTTTTAATGCTTTTGCTCATAATTTAGCCCGTGAAGGCCTTTCTTATGTAACACCACTCCTGTGGAAACAATATTATCCTGAGTGGATACTTAGTTTATTGTTCAAAGAGCGAAATCTGTTTGTATCCCTGGGGTCCGGTGCTTTTTAA
Coding sequence (CDS)
ATGACGGTGCCGAGCAAAGTTAAGGTTTTTGTATGGAAATCGTATCATGATTCTATACCGACAGTGGTCAATCTTCGAAACCATCATGTCCCGACTGGTGGTATTTGTCCTCTCTGTCAAGAAGAAATGGAGACTACTGATCATGCCCTATTTCGGTGTGTTAGGGCGAGTGAGGTTTGGGAAAGATTGATTCCTATGATGGTTGGTCGAAACTCATGTTACTCCAACATCAAAGATAGATGGCAGGAGCTGGCTGATGGTCAGGTGCAGGACCAAGAGTATTTTTGTGTGGGTGCATGGCCTATTTGGAATGATAGAAATAGTTGGATTCATAAGCGGCCTATCTCGGATGTAGGGACGCGCTGTGATGGGATTATTGAATATTTAGCTGATTATAAAAGGGTCAATCCGAAAGCGAATGCTCTCACCCAAGATGAACAAGATATTCGAGATATCATCTCAAAGGGCGAAGATTTCATATTACATTCTGATGCAGCCTTTAAAGGAAAGAATCAACCGAGCGGGGTTGGTTTAGTACTTCGAGATAAATCTGGCATTTTAAAAGCAGCTCAAATTTTGTGCCCTTCGGGGTGTTCTTCTCCTTTAGCGGCGGAAGCGGTCGAGGTTTTAGAAGGCTTACGTTTGGCACGGTCTCTGGAAGTGCAGAAATTAACGATCCTATATGATTCTCTTTCGTTAATACAATATCTAAATGACGACCAACAGTGTGATTCCAGAATAGCAACAACAATGTGGGATATAGGGGATATCAAACGTTCCTTCATCAAAGTGAGCTTTCAATTTGTTAATCGTCGTTTTAATGCTTTTGCTCATAATTTAGCCCGTGAAGGCCTTTCTTATGTAACACCACTCCTGTGGAAACAATATTATCCTGAGTGGATACTTAGTTTATTGTTCAAAGAGCGAAATCTGTTTGTATCCCTGGGGTCCGGTGCTTTTTAA
Protein sequence
MTVPSKVKVFVWKSYHDSIPTVVNLRNHHVPTGGICPLCQEEMETTDHALFRCVRASEVWERLIPMMVGRNSCYSNIKDRWQELADGQVQDQEYFCVGAWPIWNDRNSWIHKRPISDVGTRCDGIIEYLADYKRVNPKANALTQDEQDIRDIISKGEDFILHSDAAFKGKNQPSGVGLVLRDKSGILKAAQILCPSGCSSPLAAEAVEVLEGLRLARSLEVQKLTILYDSLSLIQYLNDDQQCDSRIATTMWDIGDIKRSFIKVSFQFVNRRFNAFAHNLAREGLSYVTPLLWKQYYPEWILSLLFKERNLFVSLGSGAF
Homology
BLAST of Lag0031523 vs. NCBI nr
Match:
XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])
HSP 1 Score: 147.1 bits (370), Expect = 2.5e-31
Identity = 94/317 (29.65%), Postives = 155/317 (48.90%), Query Frame = 0
Query: 1 MTVPSKVKVFVWKSYHDSIPTVVNLRNHHVPTGGICPLCQEEMETTDHALFRCVRASEVW 60
+TVP+K+K+F+W+S H+ IPT NL + C +C + E+ HA F C RA ++W
Sbjct: 1138 LTVPTKIKIFIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRESIIHAFFHCKRARQIW 1197
Query: 61 ERLIPMMVGRNSCYSNIK--DRWQELADG-QVQDQEYFCVGAWPIWNDRNSWIHKRPISD 120
L P + S NI + W L + + +D + W IWNDRNS IH + +S
Sbjct: 1198 RTLFPFLTCL-SAEDNISFLELWSSLTEQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSP 1257
Query: 121 VGTRCDGIIEYLADYKRVNPKANALTQDEQDIRDII-----SKGEDFILHSDAAFKGKNQ 180
V +C+ + +L + + +N + + + R ++ S L++DAA +G +
Sbjct: 1258 VEFKCEWLTPFLDSHSQAQ-MSNYSPRTQSNHRPVVQYWRPSSSVSLKLNTDAACRGAS- 1317
Query: 181 PSGVGLVLRDKSGILKAAQILCPSGCSSPLAAEAVEVLEGLRLARSLEVQKLTILYDSLS 240
+ G ++RD S L AA + SPL AE +LEGL+ A + L + DSL
Sbjct: 1318 -TSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCILEGLKFAAASNFTHLEVESDSLL 1377
Query: 241 LIQYLNDDQQCDSRIATTMWDIGDIKRSFIKVSFQFVNRRFNAFAHNLAREGL-SYVTPL 300
IQ + ++ + +I + F +SF +R+ N AH LA+ G+ S
Sbjct: 1378 AIQLIRNEIHTRGDEQNWVMEIQALTCCFAFISFSHSSRQCNRAAHGLAKWGITSPSATY 1437
Query: 301 LWKQYYPEWILSLLFKE 309
W +P W+L L+ ++
Sbjct: 1438 AWLFNFPTWLLDLVQRD 1450
BLAST of Lag0031523 vs. NCBI nr
Match:
XP_030508858.1 (uncharacterized protein LOC115723499 [Cannabis sativa])
HSP 1 Score: 141.0 bits (354), Expect = 1.8e-29
Identity = 89/320 (27.81%), Postives = 145/320 (45.31%), Query Frame = 0
Query: 1 MTVPSKVKVFVWKSYHDSIPTVVNLRNHHVPTGGICPLCQEEMETTDHALFRCVRASEVW 60
+ +PSK+++FVWK +H++IP L H+ CPLC+++ ET HALF C RA EVW
Sbjct: 786 LKLPSKLRIFVWKVFHNAIPVAAELHRKHIANTPYCPLCKQQQETIPHALFLCTRAKEVW 845
Query: 61 ERLIPMMVGRNSCYSNIKDRWQELADG-QVQDQEYFCVGAWPIWNDRNSWIHKRPISDVG 120
+ + + S+ ++ +D D E F W IW +RN+ H +
Sbjct: 846 RLSSIKLNFKLAATSSAEEFLFYASDNTSTSDFEQFLTICWSIWYERNAEFHDKSPKQPA 905
Query: 121 TRCDGIIEYLADYKRV-------NPKANALTQDEQDIRDIISKGE-------DFILHSDA 180
+YL Y+ N A ++T + S + F L++DA
Sbjct: 906 AVLAFATDYLGKYQSAQAQSVSNNSAATSITHPASRSQVAASTDQWIAPLAGKFKLNTDA 965
Query: 181 AFKGKNQPSGVGLVLRDKSGILKAAQILCPSGCSSPLAAEAVEVLEGLRLARSLEVQKLT 240
A ++ G+G VLRD SG++KAA GC EA ++ L+ +L +
Sbjct: 966 ACNKASKIIGLGAVLRDSSGLIKAAFSKAIKGCYKAEEMEATALVHALQWLLNLGLTADI 1025
Query: 241 ILYDSLSLIQYLNDDQQCDSRIATTMWDIGDIKRSFIKVSFQFVNRRFNAFAHNLAREGL 300
I DSL ++Q L C S + D+ + SF + V R N +A LA+ L
Sbjct: 1026 IETDSLLVVQGLKAASSCSSAFHAILNDVNYLVSSFPRAQITHVKRSANTYADVLAKFAL 1085
Query: 301 SYVTPLLWKQYYPEWILSLL 306
+ T W + +P +++++
Sbjct: 1086 TVDTDCTWLEEFPPPLMTVM 1105
BLAST of Lag0031523 vs. NCBI nr
Match:
XP_030483669.1 (uncharacterized protein LOC115700241 [Cannabis sativa])
HSP 1 Score: 138.7 bits (348), Expect = 9.1e-29
Identity = 89/328 (27.13%), Postives = 147/328 (44.82%), Query Frame = 0
Query: 1 MTVPSKVKVFVWKSYHDSIPTVVNLRNHHVPTGGICPLCQEEMETTDHALFRCVRASEVW 60
+ +PSK+++FVWK +H+++P L H+ CPLC+ ET +HALF C RA +VW
Sbjct: 605 LKLPSKIRIFVWKVFHNALPVASELHRKHIAETPFCPLCKVHKETLNHALFFCTRAKDVW 664
Query: 61 ERLIPMMVGRNSCYSNIKDRWQEL-ADGQVQDQEYFCVGAWPIWNDRNSWIHKRPISDVG 120
+ + + + + + D + A+ + E F V W IW +RN+ H +P
Sbjct: 665 RQSLLVFNFKMAASTTSADFLLYVSANTSSTEFEKFLVICWSIWFERNAEYHNKPSKKAA 724
Query: 121 TRCDGIIEYLADYKRVNPKA--NALTQDEQDIRDIISKGE---------------DFILH 180
D YL Y+ + NA + R +++ L+
Sbjct: 725 AVLDFATNYLLKYQNAQASSSHNAGSATSTASRASVTQETPLPSPTALWTAPPLGKLKLN 784
Query: 181 SDAAFKGKNQPSGVGLVLRDKSGILKAAQILCPSGCSSPLAAEAVEVLEGLRLARSLEVQ 240
SDAA G+G V+RD G++ AA GC P EAV + L+ A +L +
Sbjct: 785 SDAACNKALGKIGIGAVVRDSFGVIVAALSKPIQGCFKPEEMEAVALAHSLKWAANLGLS 844
Query: 241 KLTILYDSLSLIQYLNDDQQCDSRIATTMWDIGDIKRSFIKVSFQFVNRRFNAFAHNLAR 300
I DSL ++Q L C+S + D+ + F + V R N +A LA+
Sbjct: 845 INFIETDSLLVVQDLKIAHMCNSAFHLILNDVNYLVSFFPRAQITHVKRSANTYADVLAK 904
Query: 301 EGLSYVTPLLWKQYYPEWILSLLFKERN 311
L+ T + W + +P +++++ RN
Sbjct: 905 FALTVDTDVSWLEEFPPLLMTVIVPNRN 932
BLAST of Lag0031523 vs. NCBI nr
Match:
XP_030498122.1 (uncharacterized protein LOC115713779 [Cannabis sativa])
HSP 1 Score: 136.3 bits (342), Expect = 4.5e-28
Identity = 87/305 (28.52%), Postives = 138/305 (45.25%), Query Frame = 0
Query: 1 MTVPSKVKVFVWKSYHDSIPTVVNLRNHHVPTGGICPLCQEEMETTDHALFRCVRASEVW 60
+ +PSK+++FVWK +H+ +P L H+ CPLC+ + ET HALF C RA EVW
Sbjct: 1058 LQLPSKLRIFVWKVFHNVLPVASELNRRHIAASPYCPLCKLQQETIPHALFLCSRAKEVW 1117
Query: 61 ERLIPMMVGRNSCYSNIKDRWQELADGQVQDQEY--FCVGAWPIWNDRNSWIHKRPISDV 120
++ + + S+ + + G E+ F W IW +RN+ H +P
Sbjct: 1118 -KISNLNLNFKLAASSSAEEFLLYVSGHTSTLEFEQFLTLCWSIWFERNAEFHDKPAKCP 1177
Query: 121 GTRCDGIIEYLADYKRVNPKANALTQDEQDIRDIISKGE--------------DFILHSD 180
D ++Y+A Y+ V+ K+N D + + L++D
Sbjct: 1178 TAIKDFALQYIAKYQSVHAKSNVPCPDVAPAAPFPTSTSAAPSVDPWKAPPQGTYKLNTD 1237
Query: 181 AAFKGKNQPSGVGLVLRDKSGILKAAQILCPSGCSSPLAAEAVEVLEGLRLARSLEVQKL 240
AAF N+ G+G VLRD SG +KAA G EA ++ L+ +S+ +
Sbjct: 1238 AAFDKTNKIIGIGAVLRDSSGFIKAAFSKSIHGSYKAEEMEATALVYALQWLQSIGLSTD 1297
Query: 241 TILYDSLSLIQYLNDDQQCDSRIATTMWDIGDIKRSFIKVSFQFVNRRFNAFAHNLAREG 290
I DSL ++Q L +S T + D+ + F + V R N +AH LA+
Sbjct: 1298 YIETDSLLVVQGLKVASHFNSAFHTVLNDVNYLVSYFPRAQVSHVRRSANTYAHVLAKFA 1357
BLAST of Lag0031523 vs. NCBI nr
Match:
MBA0821628.1 (hypothetical protein [Gossypium armourianum])
HSP 1 Score: 134.0 bits (336), Expect = 2.2e-27
Identity = 88/289 (30.45%), Postives = 143/289 (49.48%), Query Frame = 0
Query: 1 MTVPSKVKVFVWKSYHDSIPTVVNLRNHHVPTGGICPLCQEEMETTDHALFRCVRASEVW 60
+ +PSK+ + VW+ + +PT+VNLRN + T CP C E + H +C + EVW
Sbjct: 92 LQLPSKILLLVWRISWNYMPTLVNLRNKRITTIVRCPRCGSGEEDSFHVFRQCPTSIEVW 151
Query: 61 ERLIPMMVGRNSCYSNIKDR-WQE--LADGQVQDQEYFCVGAWPIWNDRNSWIHKRPISD 120
+ + +G + +S+ R W L G + FC W IWN RN +H+R
Sbjct: 152 QNI---SMGWVTIFSDQNIRTWLTWVLEKGTKEQNLVFCCALWVIWNSRNQLVHERKHLS 211
Query: 121 VGTRCDGIIEYLADYKRVNPKANALTQDEQDIRDIISKGEDFILHSDAAFKGKNQPSGVG 180
I Y+A+ + V + + D + + ED IL DAAF+ S G
Sbjct: 212 GRILAQRIESYIAELEGVGKEKHTWGTDRLQ-KHSEEEPEDTILF-DAAFEANRSRSASG 271
Query: 181 LVLRDKSGILKAAQILCPSGCSSPLAAEAVEVLEGLRLARSLEVQKLTILYDSLSLIQYL 240
++ R++ G +K + S SSP AEA+ L+ ++L SL ++ +TI DS ++I+
Sbjct: 272 VIARNRRGEMKVLKTTLHSNVSSPFFAEALACLQAVKLGVSLGLRSVTIRGDSKTVIKKC 331
Query: 241 NDDQQCDSRIATTMWDIGDIKRSFIKVSFQFVNRRFNAFAHNLAREGLS 287
++ S I + DI + F +VSFQF+ + N AH +A+E L+
Sbjct: 332 QSAERDKSSIGAVINDIKNHSLLFHEVSFQFIQKSENYQAHEIAKETLA 375
BLAST of Lag0031523 vs. ExPASy TrEMBL
Match:
A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)
HSP 1 Score: 147.1 bits (370), Expect = 1.2e-31
Identity = 94/317 (29.65%), Postives = 155/317 (48.90%), Query Frame = 0
Query: 1 MTVPSKVKVFVWKSYHDSIPTVVNLRNHHVPTGGICPLCQEEMETTDHALFRCVRASEVW 60
+TVP+K+K+F+W+S H+ IPT NL + C +C + E+ HA F C RA ++W
Sbjct: 1138 LTVPTKIKIFIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRESIIHAFFHCKRARQIW 1197
Query: 61 ERLIPMMVGRNSCYSNIK--DRWQELADG-QVQDQEYFCVGAWPIWNDRNSWIHKRPISD 120
L P + S NI + W L + + +D + W IWNDRNS IH + +S
Sbjct: 1198 RTLFPFLTCL-SAEDNISFLELWSSLTEQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSP 1257
Query: 121 VGTRCDGIIEYLADYKRVNPKANALTQDEQDIRDII-----SKGEDFILHSDAAFKGKNQ 180
V +C+ + +L + + +N + + + R ++ S L++DAA +G +
Sbjct: 1258 VEFKCEWLTPFLDSHSQAQ-MSNYSPRTQSNHRPVVQYWRPSSSVSLKLNTDAACRGAS- 1317
Query: 181 PSGVGLVLRDKSGILKAAQILCPSGCSSPLAAEAVEVLEGLRLARSLEVQKLTILYDSLS 240
+ G ++RD S L AA + SPL AE +LEGL+ A + L + DSL
Sbjct: 1318 -TSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCILEGLKFAAASNFTHLEVESDSLL 1377
Query: 241 LIQYLNDDQQCDSRIATTMWDIGDIKRSFIKVSFQFVNRRFNAFAHNLAREGL-SYVTPL 300
IQ + ++ + +I + F +SF +R+ N AH LA+ G+ S
Sbjct: 1378 AIQLIRNEIHTRGDEQNWVMEIQALTCCFAFISFSHSSRQCNRAAHGLAKWGITSPSATY 1437
Query: 301 LWKQYYPEWILSLLFKE 309
W +P W+L L+ ++
Sbjct: 1438 AWLFNFPTWLLDLVQRD 1450
BLAST of Lag0031523 vs. ExPASy TrEMBL
Match:
A0A803NJJ8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 141.0 bits (354), Expect = 8.8e-30
Identity = 89/320 (27.81%), Postives = 145/320 (45.31%), Query Frame = 0
Query: 1 MTVPSKVKVFVWKSYHDSIPTVVNLRNHHVPTGGICPLCQEEMETTDHALFRCVRASEVW 60
+ +PSK+++FVWK +H++IP L H+ CPLC+++ ET HALF C RA EVW
Sbjct: 112 LKLPSKLRIFVWKVFHNAIPVAAELHRKHIANTPYCPLCKQQQETIPHALFLCTRAKEVW 171
Query: 61 ERLIPMMVGRNSCYSNIKDRWQELADG-QVQDQEYFCVGAWPIWNDRNSWIHKRPISDVG 120
+ + + S+ ++ +D D E F W IW +RN+ H +
Sbjct: 172 RLSSIKLNFKLAATSSAEEFLFYASDNTSTSDFEQFLTICWSIWYERNAEFHDKSPKQPA 231
Query: 121 TRCDGIIEYLADYKRV-------NPKANALTQDEQDIRDIISKGE-------DFILHSDA 180
+YL Y+ N A ++T + S + F L++DA
Sbjct: 232 AVLAFATDYLGKYQSAQAQSVSNNSAATSITHPASRSQVAASTDQWIAPLAGKFKLNTDA 291
Query: 181 AFKGKNQPSGVGLVLRDKSGILKAAQILCPSGCSSPLAAEAVEVLEGLRLARSLEVQKLT 240
A ++ G+G VLRD SG++KAA GC EA ++ L+ +L +
Sbjct: 292 ACNKASKIIGLGAVLRDSSGLIKAAFSKAIKGCYKAEEMEATALVHALQWLLNLGLTADI 351
Query: 241 ILYDSLSLIQYLNDDQQCDSRIATTMWDIGDIKRSFIKVSFQFVNRRFNAFAHNLAREGL 300
I DSL ++Q L C S + D+ + SF + V R N +A LA+ L
Sbjct: 352 IETDSLLVVQGLKAASSCSSAFHAILNDVNYLVSSFPRAQITHVKRSANTYADVLAKFAL 411
Query: 301 SYVTPLLWKQYYPEWILSLL 306
+ T W + +P +++++
Sbjct: 412 TVDTDCTWLEEFPPPLMTVM 431
BLAST of Lag0031523 vs. ExPASy TrEMBL
Match:
A0A803PH33 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 136.7 bits (343), Expect = 1.7e-28
Identity = 87/321 (27.10%), Postives = 145/321 (45.17%), Query Frame = 0
Query: 1 MTVPSKVKVFVWKSYHDSIPTVVNLRNHHVPTGGICPLCQEEMETTDHALFRCVRASEVW 60
+ +PSK+++FVWK +H+ +P L H+ CPLC+ + ET HALF C RA EVW
Sbjct: 265 LQLPSKLRIFVWKVFHNVLPVASELNRRHIAASPYCPLCKLQQETIPHALFLCSRAKEVW 324
Query: 61 ERLIPMMVGRNSCYSNIKDRWQELADGQVQDQEY--FCVGAWPIWNDRNSWIHKRPISDV 120
R+ + + S+ + + E+ F W IW +RN+ H +P
Sbjct: 325 -RISGLNLNFKLAASSSAEEFLLYVSEHTSTLEFEQFLTLCWSIWFERNAEFHDKPAKCP 384
Query: 121 GTRCDGIIEYLADYKRVNPKANALTQDEQDIRDIISK--------------GEDFILHSD 180
D ++Y+ Y+ V+ K N + D + + L++D
Sbjct: 385 TAIKDFALQYITKYQSVHDKPNVPSPDVAPAAPFPTSTFAAPSVDPWKAPPPGTYKLNTD 444
Query: 181 AAFKGKNQPSGVGLVLRDKSGILKAAQILCPSGCSSPLAAEAVEVLEGLRLARSLEVQKL 240
AAF N+ G+G VLRD SG ++AA G EA ++ L+ RS+ +
Sbjct: 445 AAFDKTNKIIGIGAVLRDSSGFIQAAFSKSIHGSYKVEEMEATALVYALQWLRSIGLSTD 504
Query: 241 TILYDSLSLIQYLNDDQQCDSRIATTMWDIGDIKRSFIKVSFQFVNRRFNAFAHNLAREG 300
I DSL ++Q L +S + + D+ + F + V R N +AH LA+
Sbjct: 505 YIETDSLLVVQGLKVASHFNSAFHSVLNDVNYLVSYFPRAQVSHVRRSANTYAHVLAKFA 564
Query: 301 LSYVTPLLWKQYYPEWILSLL 306
L+ T W + +P +++++
Sbjct: 565 LTVDTDCSWLEEFPSPLMTIV 584
BLAST of Lag0031523 vs. ExPASy TrEMBL
Match:
A0A803QJN9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 8.3e-28
Identity = 87/323 (26.93%), Postives = 145/323 (44.89%), Query Frame = 0
Query: 1 MTVPSKVKVFVWKSYHDSIPTVVNLRNHHVPTGGICPLCQEEMETTDHALFRCVRASEVW 60
+ +PSK+++FVWK +H+++P L H+ CPLC+ ET +HALF C RA +VW
Sbjct: 841 LKLPSKIRIFVWKVFHNALPVASELHRKHIAETPFCPLCKVHKETLNHALFFCTRAKDVW 900
Query: 61 ERLIPMMVGRNSCYSNIKDRWQEL-ADGQVQDQEYFCVGAWPIWNDRNSWIHKRPISDVG 120
+ + + + + + D + A+ + E F V W IW +RN+ H +P
Sbjct: 901 RQSLLVFNFKMAASTTSADFLLYVSANTSSTEFEKFLVICWSIWFERNAEYHNKPSKKAA 960
Query: 121 TRCDGIIEYLADYKRVNPKA--NALTQDEQDIRDIISKGE---------------DFILH 180
D YL Y+ + NA + R +++ L+
Sbjct: 961 AVLDFATNYLLKYQNAQASSSHNAGSATSTASRASVTQETPLPSPTALWTAPPLGKLKLN 1020
Query: 181 SDAAFKGKNQPSGVGLVLRDKSGILKAAQILCPSGCSSPLAAEAVEVLEGLRLARSLEVQ 240
SDAA G+G V+RD G++ AA GC P EAV + L+ A +L +
Sbjct: 1021 SDAACNKALGKIGIGAVVRDSFGVIVAALSKPIQGCFKPEEMEAVALAHSLKWAANLGLS 1080
Query: 241 KLTILYDSLSLIQYLNDDQQCDSRIATTMWDIGDIKRSFIKVSFQFVNRRFNAFAHNLAR 300
I DSL ++Q L C+S + D+ + F + V R N +A LA+
Sbjct: 1081 INFIETDSLLVVQDLKIAHMCNSAFHLILNDVNYLVSFFPRAQITHVKRSANTYADVLAK 1140
Query: 301 EGLSYVTPLLWKQYYPEWILSLL 306
L+ T + W + +P +++++
Sbjct: 1141 FALTVDTDVSWLEEFPPLLMTVM 1163
BLAST of Lag0031523 vs. ExPASy TrEMBL
Match:
A0A7J9IIF5 (Uncharacterized protein OS=Gossypium armourianum OX=34283 GN=Goarm_018472 PE=4 SV=1)
HSP 1 Score: 134.0 bits (336), Expect = 1.1e-27
Identity = 88/289 (30.45%), Postives = 143/289 (49.48%), Query Frame = 0
Query: 1 MTVPSKVKVFVWKSYHDSIPTVVNLRNHHVPTGGICPLCQEEMETTDHALFRCVRASEVW 60
+ +PSK+ + VW+ + +PT+VNLRN + T CP C E + H +C + EVW
Sbjct: 92 LQLPSKILLLVWRISWNYMPTLVNLRNKRITTIVRCPRCGSGEEDSFHVFRQCPTSIEVW 151
Query: 61 ERLIPMMVGRNSCYSNIKDR-WQE--LADGQVQDQEYFCVGAWPIWNDRNSWIHKRPISD 120
+ + +G + +S+ R W L G + FC W IWN RN +H+R
Sbjct: 152 QNI---SMGWVTIFSDQNIRTWLTWVLEKGTKEQNLVFCCALWVIWNSRNQLVHERKHLS 211
Query: 121 VGTRCDGIIEYLADYKRVNPKANALTQDEQDIRDIISKGEDFILHSDAAFKGKNQPSGVG 180
I Y+A+ + V + + D + + ED IL DAAF+ S G
Sbjct: 212 GRILAQRIESYIAELEGVGKEKHTWGTDRLQ-KHSEEEPEDTILF-DAAFEANRSRSASG 271
Query: 181 LVLRDKSGILKAAQILCPSGCSSPLAAEAVEVLEGLRLARSLEVQKLTILYDSLSLIQYL 240
++ R++ G +K + S SSP AEA+ L+ ++L SL ++ +TI DS ++I+
Sbjct: 272 VIARNRRGEMKVLKTTLHSNVSSPFFAEALACLQAVKLGVSLGLRSVTIRGDSKTVIKKC 331
Query: 241 NDDQQCDSRIATTMWDIGDIKRSFIKVSFQFVNRRFNAFAHNLAREGLS 287
++ S I + DI + F +VSFQF+ + N AH +A+E L+
Sbjct: 332 QSAERDKSSIGAVINDIKNHSLLFHEVSFQFIQKSENYQAHEIAKETLA 375
BLAST of Lag0031523 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 71.2 bits (173), Expect = 1.7e-12
Identity = 67/314 (21.34%), Postives = 121/314 (38.54%), Query Frame = 0
Query: 1 MTVPSKVKVFVWKSYHDSIPTVVNLRNHHVPTGGICPLCQEEMETTDHALFRCVRASEVW 60
+ + K+K F+W++ ++ T L + CP C E E+ +HALF C A+ W
Sbjct: 165 LPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAW 224
Query: 61 ----ERLIPMMVGRNSCYSNIKDRWQELADGQVQDQEYFCVG--AWPIWNDRNSWIH--- 120
LI + N NI + + D + D W IW RN+ +
Sbjct: 225 RLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKF 284
Query: 121 ----KRPISDVGTRCDGIIEYLADYKRVNPKANALTQDEQDIRDIISKGEDFILHSDAAF 180
+ + + +K+ + +++ + R+ + DA F
Sbjct: 285 RESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRN--PPATYVKCNFDAGF 344
Query: 181 KGKNQPSGVGLVLRDKSGILKAAQILCPSGCSSPLAAEAVEVLEGLRLARSLEVQKLTIL 240
+ + G ++R+ G + + + S+PL AE +L L+ ++ +
Sbjct: 345 DVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQVFME 404
Query: 241 YDSLSLIQYLNDDQQCDSRIATTMWDIGDIKRSFIKVSFQFVNRRFNAFAHNLAREGLSY 300
D +LI +N S +A + DI F + F F+ R+ N AH LA+ G +Y
Sbjct: 405 GDCQTLINLIN-GISFHSSLANHLEDISFWANKFASIQFGFIRRKGNKLAHVLAKYGCTY 464
Query: 301 VTPLLWKQYYPEWI 302
T P W+
Sbjct: 465 STFYSGSGSLPIWL 475
BLAST of Lag0031523 vs. TAIR 10
Match:
AT3G25270.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 62.0 bits (149), Expect = 1.0e-09
Identity = 71/330 (21.52%), Postives = 131/330 (39.70%), Query Frame = 0
Query: 6 KVKVFVWKSYHDSIPTVVNLRNHHVPTGGICPLCQEEMETTDHALFRCVRASEVWERL-I 65
K+K F+WK ++ T NL+ H+ C C +E ET+ H F C A +VW I
Sbjct: 26 KIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQQVWRASGI 85
Query: 66 P--------------MMVGRNSCYSNIKDRWQELADGQVQDQEYFCVGAWPIWNDRNSWI 125
P M + +SC +N + + LA + W +W RN +
Sbjct: 86 PHQELRTTGITMETKMELLLSSCLANRQPQLFNLAIWIL----------WRLWKSRNQLV 145
Query: 126 HKRPISDVGTRCDGIIEYLADYKRVNPKANALTQDEQDIRD-----IISKGE----DFIL 185
++ + +++ N +L Q R +K + +I
Sbjct: 146 FQQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRHQQPTMARTKWQRPPSTWIK 205
Query: 186 HS-DAAFKGKNQPSGVGLVLRDKSGILKAAQILCPSGCSSPLAAEAVEVLEGLRLARSLE 245
++ D AF + + + G ++RD++G+ + S S L +E ++ ++ A S
Sbjct: 206 YNYDGAFNHQTRNAKAGWLMRDENGVYMGSGQAIGSTTSDSLESEFQALIIAMQHAWSQG 265
Query: 246 VQKLTILYDSLSLIQYLNDDQQCDSRI----ATTMWDIGDIKRSFIKVSFQFVNRRFNAF 305
+K+ DS + + +N+++ R W ++ F + F++V R N
Sbjct: 266 YRKVIFEGDSKQVEELMNNEKLNFGRFNWIREGRFW-----QKRFEEAVFKWVPRTNNQP 325
Query: 306 AHNLAREGLSYVTPLLWKQYYPEWILSLLF 307
A LA+ L + Y P +I S L+
Sbjct: 326 ADILAKHHLQPNQSFKFHYYVPAFITSTLY 340
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DX30 | 1.2e-31 | 29.65 | uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A803NJJ8 | 8.8e-30 | 27.81 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803PH33 | 1.7e-28 | 27.10 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803QJN9 | 8.3e-28 | 26.93 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A7J9IIF5 | 1.1e-27 | 30.45 | Uncharacterized protein OS=Gossypium armourianum OX=34283 GN=Goarm_018472 PE=4 S... | [more] |
Match Name | E-value | Identity | Description | |
AT3G09510.1 | 1.7e-12 | 21.34 | Ribonuclease H-like superfamily protein | [more] |
AT3G25270.1 | 1.0e-09 | 21.52 | Ribonuclease H-like superfamily protein | [more] |