Lag0031487 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGAGGCAAGGATCAGCCAACAAACAAAAGAGAAAGGGTGAGAAAAGTTTCAGAGAGAGAGTAGTTGTGTCTGTGCAAATAGGCACAGAGGAAAAGTTACAACTTTTTTTAGACAAGACAAAGTAGCTTTCAATCCACCTAAACTTTTCTTCTGTGTCTACTTGCACAGACACAAATGGTCAAAATGGCTTTGTTGAGATTGTCTATCTTGTTATGTATGATGCTATTTGGCCCTTCCCTTTCAGGGGCTACTTCTCCGAAGAACATATTTATCCTCGCCGGTCAGAGCAACATGGCTGGCCGAGGTGGGGTTGAGAAAGATTAATCGGGACACCTTGTGTGGGATGGGTATGTCCCACCAGTGTGTCAACCTGATCCATCCATCCTACGATTAAACCCTAAGCGCAAATGGGAGGTAGCACGAGAGCCTATCCATGCAGGGATTGACCTCGGCAAGACCCCTGGGATTGGTCCGACAATGTCAATTGCTCGCCAGTTACAAGCAAAAGCTGGGCAAAAGGTAGGTGTTGTGGGTTTAGTTCCTTGTGCTAGAGGTGGCACTTTAATCGAACAATGGATTAAAAACCCTAGCAATCCTAATAAAACTTTTTACCAAAATTTCATTGAACGAATCAAAGCGTTAGATAAAGAAGGTGGGTGGTGCGTGCTCTTTTCTGATACTAAGGGGAAAGCGATGCAGCTATGAGTGACACTGCTCATAGATACAAAGACAACCTAAAGAAGTTCTTCACTGACATCCGCAATGATATAAAACCTAGATTTTTACCCATCATTATTGTTAAAATAGCCCTCTATGACTTTTTTTATGAAGCACGATACTCATGATTTGCCAACAGTGAGGGCAACGCAAGAAGCACTCCAACACGAGTTGCCGGATGTGGTGACCATCGACTCTTGGAAATTGCCTATAAACTTTACCACATACGAAGGCTTTAGCCTAGATCATGGTCATTTTAATACCGCCACTGAGATTGCTTTGGGTAAATGGTTGGCTGATACCTACCTCTCCCACTATGGATATTTACTTTAA ATGCAGAGGCAAGGATCAGCCAACAAACAAAAGAGAAAGGGGGCTACTTCTCCGAAGAACATATTTATCCTCGCCGGTCAGAGCAACATGGCTGGCCGAGTGTGTCAACCTGATCCATCCATCCTACGATTAAACCCTAAGCGCAAATGGGAGGTAGCACGAGAGCCTATCCATGCAGGGATTGACCTCGGCAAGACCCCTGGGATTGGTCCGACAATGTCAATTGCTCGCCAGTTACAAGCAAAAGCTGGGCAAAAGCACGATACTCATGATTTGCCAACAGTGAGGGCAACGCAAGAAGCACTCCAACACGAGTTGCCGGATGTGGTGACCATCGACTCTTGGAAATTGCCTATAAACTTTACCACATACGAAGGCTTTAGCCTAGATCATGGTCATTTTAATACCGCCACTGAGATTGCTTTGGGTAAATGGTTGGCTGATACCTACCTCTCCCACTATGGATATTTACTTTAA ATGCAGAGGCAAGGATCAGCCAACAAACAAAAGAGAAAGGGGGCTACTTCTCCGAAGAACATATTTATCCTCGCCGGTCAGAGCAACATGGCTGGCCGAGTGTGTCAACCTGATCCATCCATCCTACGATTAAACCCTAAGCGCAAATGGGAGGTAGCACGAGAGCCTATCCATGCAGGGATTGACCTCGGCAAGACCCCTGGGATTGGTCCGACAATGTCAATTGCTCGCCAGTTACAAGCAAAAGCTGGGCAAAAGCACGATACTCATGATTTGCCAACAGTGAGGGCAACGCAAGAAGCACTCCAACACGAGTTGCCGGATGTGGTGACCATCGACTCTTGGAAATTGCCTATAAACTTTACCACATACGAAGGCTTTAGCCTAGATCATGGTCATTTTAATACCGCCACTGAGATTGCTTTGGGTAAATGGTTGGCTGATACCTACCTCTCCCACTATGGATATTTACTTTAA MQRQGSANKQKRKGATSPKNIFILAGQSNMAGRVCQPDPSILRLNPKRKWEVAREPIHAGIDLGKTPGIGPTMSIARQLQAKAGQKHDTHDLPTVRATQEALQHELPDVVTIDSWKLPINFTTYEGFSLDHGHFNTATEIALGKWLADTYLSHYGYLL Homology
BLAST of Lag0031487 vs. NCBI nr
Match: XP_023002177.1 (probable carbohydrate esterase At4g34215 [Cucurbita maxima] >XP_023002870.1 probable carbohydrate esterase At4g34215 [Cucurbita maxima] >XP_023002871.1 probable carbohydrate esterase At4g34215 [Cucurbita maxima]) HSP 1 Score: 195.7 bits (496), Expect = 3.1e-46 Identity = 113/267 (42.32%), Postives = 129/267 (48.31%), Query Frame = 0
BLAST of Lag0031487 vs. NCBI nr
Match: XP_022973316.1 (probable carbohydrate esterase At4g34215 [Cucurbita maxima] >XP_022973317.1 probable carbohydrate esterase At4g34215 [Cucurbita maxima]) HSP 1 Score: 187.6 bits (475), Expect = 8.4e-44 Identity = 111/270 (41.11%), Postives = 129/270 (47.78%), Query Frame = 0
BLAST of Lag0031487 vs. NCBI nr
Match: XP_023536885.1 (probable carbohydrate esterase At4g34215 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023536886.1 probable carbohydrate esterase At4g34215 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 186.0 bits (471), Expect = 2.4e-43 Identity = 108/268 (40.30%), Postives = 125/268 (46.64%), Query Frame = 0
BLAST of Lag0031487 vs. NCBI nr
Match: KAG6585849.1 (putative carbohydrate esterase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 184.1 bits (466), Expect = 9.3e-43 Identity = 108/268 (40.30%), Postives = 126/268 (47.01%), Query Frame = 0
BLAST of Lag0031487 vs. NCBI nr
Match: KAG6585825.1 (putative carbohydrate esterase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 184.1 bits (466), Expect = 9.3e-43 Identity = 108/268 (40.30%), Postives = 126/268 (47.01%), Query Frame = 0
BLAST of Lag0031487 vs. ExPASy Swiss-Prot
Match: Q8L9J9 (Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana OX=3702 GN=At4g34215 PE=1 SV=2) HSP 1 Score: 65.9 bits (159), Expect = 4.8e-10 Identity = 36/93 (38.71%), Postives = 48/93 (51.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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