Lag0031434 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0031434
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Leucine-rich repeat protein kinase family protein
Location	chr11: 8436252 .. 8436797 (-)
RNA-Seq Expression	Lag0031434
Synteny	Lag0031434

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTGGTCCAATGGACTTTTCTCCACTGTGATTTGGGCCTTTCTCTTCGTATCCTTAATACTGACCAAAGTTTATCACAAAAAATTGATCAAACTCATCGGATATTGCGAAGAATCCACAAAATTGGGTCTGGTTTATGAGTTCATGGCCAATGGAGACTTGAGGAAGAATCTTACAGGTTCTACACAGCTTCAGCTAAGCTTCCACGGTTGAAAAGTTAGAGGAGATTTTAAATTGTTTCAATCTTATCATCTTGACTTTTTTTATGCAGATGCAGATCAAAGTTGTTCGACCAAATTGACATGGAGACGTAGACTTGGAATCGGCATTGATGTGGCCAAAGCTTTGGAATATTTGCACCAAGGTTGCGAGCCGCCGATCATTCATAGGAACGTCATGAGTTCAAACATTCTCTTGTCTGAGAATTTTGAAGCCAAGGTTTCTGAGTTTTCTTTGGCCGTCGACCTAATTCTGTCCCACAATGGTGAATCTCATGTGTCCGTTAATATTGAAGGCACTAACGGATGCATCGACCCACAGTAA

mRNA sequence

ATGGGCTGGTCCAATGGACTTTTCTCCACTGTGATTTGGGCCTTTCTCTTCGTATCCTTAATACTGACCAAAGTTTATCACAAAAAATTGATCAAACTCATCGGATATTGCGAAGAATCCACAAAATTGGGTCTGGTTTATGAGTTCATGGCCAATGGAGACTTGAGGAAGAATCTTACAGATGCAGATCAAAGTTGTTCGACCAAATTGACATGGAGACGTAGACTTGGAATCGGCATTGATGTGGCCAAAGCTTTGGAATATTTGCACCAAGGTTGCGAGCCGCCGATCATTCATAGGAACGTCATGAGTTCAAACATTCTCTTGTCTGAGAATTTTGAAGCCAAGGTTTCTGAGTTTTCTTTGGCCGTCGACCTAATTCTGTCCCACAATGGTGAATCTCATGTGTCCGTTAATATTGAAGGCACTAACGGATGCATCGACCCACAGTAA

Coding sequence (CDS)

ATGGGCTGGTCCAATGGACTTTTCTCCACTGTGATTTGGGCCTTTCTCTTCGTATCCTTAATACTGACCAAAGTTTATCACAAAAAATTGATCAAACTCATCGGATATTGCGAAGAATCCACAAAATTGGGTCTGGTTTATGAGTTCATGGCCAATGGAGACTTGAGGAAGAATCTTACAGATGCAGATCAAAGTTGTTCGACCAAATTGACATGGAGACGTAGACTTGGAATCGGCATTGATGTGGCCAAAGCTTTGGAATATTTGCACCAAGGTTGCGAGCCGCCGATCATTCATAGGAACGTCATGAGTTCAAACATTCTCTTGTCTGAGAATTTTGAAGCCAAGGTTTCTGAGTTTTCTTTGGCCGTCGACCTAATTCTGTCCCACAATGGTGAATCTCATGTGTCCGTTAATATTGAAGGCACTAACGGATGCATCGACCCACAGTAA

Protein sequence

MGWSNGLFSTVIWAFLFVSLILTKVYHKKLIKLIGYCEESTKLGLVYEFMANGDLRKNLTDADQSCSTKLTWRRRLGIGIDVAKALEYLHQGCEPPIIHRNVMSSNILLSENFEAKVSEFSLAVDLILSHNGESHVSVNIEGTNGCIDPQ

Homology

[Close]

BLAST of Lag0031434 vs. NCBI nr
Match: XP_004146864.1 (probable LRR receptor-like serine/threonine-protein kinase At1g51880 [Cucumis sativus])

HSP 1 Score: 179.5 bits (454), Expect = 2.2e-41
Identity = 90/131 (68.70%), Postives = 105/131 (80.15%), Query Frame = 0


Query: 21  ILTKVYHKKLIKLIGYCEESTKLGLVYEFMANGDLRKNLTDADQSCSTKLTWRRRLGIGI 80
           +L KVYHK LIK+ GYC+ESTK  LV+EFMANGDLRKNLT +   CS+KLTW RRL I I
Sbjct: 91  LLNKVYHKNLIKVFGYCDESTKSALVFEFMANGDLRKNLTGS--GCSSKLTWERRLRIAI 150

Query: 81  DVAKALEYLHQGCEPPIIHRNVMSSNILLSENFEAKVSEFSLAVDLILSHNGESHVS-VN 140
           D+AKAL+YLH GCEPPIIHRN  SSNILLS+NFE ++S+F LAV+   SH GESH+S V 
Sbjct: 151 DMAKALDYLHDGCEPPIIHRNFNSSNILLSKNFEVRLSDFVLAVNFNPSHEGESHMSNVT 210

Query: 141 IEGTNGCIDPQ 151
           I GT G +DPQ
Sbjct: 211 ITGTLGYMDPQ 219

[Close]

BLAST of Lag0031434 vs. NCBI nr
Match: XP_022955772.1 (probable LRR receptor-like serine/threonine-protein kinase At1g51880 [Cucurbita moschata])

HSP 1 Score: 160.6 bits (405), Expect = 1.0e-35
Identity = 77/131 (58.78%), Postives = 102/131 (77.86%), Query Frame = 0


Query: 20  LILTKVYHKKLIKLIGYCEESTKLGLVYEFMANGDLRKNLTDADQSCSTKLTWRRRLGIG 79
           + L+KV+HK LI LIGY E+ST   +VYEF+ANGDL+ NLT    S STKL+W RRLGI 
Sbjct: 105 IYLSKVHHKNLINLIGYYEDSTTRAVVYEFIANGDLKNNLTG---SASTKLSWERRLGIA 164

Query: 80  IDVAKALEYLHQGCEPPIIHRNVMSSNILLSENFEAKVSEFSLAVDLILSHNGESHVSVN 139
           I +A+AL+YLH GC+PP+IHR++ S++ILL +NFE K+  F LAV L  SH+G+SHVS++
Sbjct: 165 IGLAQALDYLHDGCQPPLIHRDIKSAHILLCDNFEVKLCGFDLAVTLTPSHHGQSHVSID 224

Query: 140 IEGTNGCIDPQ 151
           + GT+  IDPQ
Sbjct: 225 VVGTSRYIDPQ 232

[Close]

BLAST of Lag0031434 vs. NCBI nr
Match: KAF3972138.1 (hypothetical protein CMV_004332 [Castanea mollissima])

HSP 1 Score: 143.3 bits (360), Expect = 1.7e-30
Identity = 67/130 (51.54%), Postives = 96/130 (73.85%), Query Frame = 0


Query: 21  ILTKVYHKKLIKLIGYCEESTKLGLVYEFMANGDLRKNLTDADQSCSTKLTWRRRLGIGI 80
           +L +V+HK L  LIGYC E T++GL+YE+MANGDL  +L+DAD +    L W+ RL I +
Sbjct: 403 LLLRVHHKNLTSLIGYCYEGTQMGLIYEYMANGDLETHLSDADNNVKI-LCWKDRLQIAL 462

Query: 81  DVAKALEYLHQGCEPPIIHRNVMSSNILLSENFEAKVSEFSLAVDLILSHNGESHVSVNI 140
           D A+ LEYLH GC+PPI+HR+V  +NILL+ENF+AK+++F L+   IL  +G +HVS  +
Sbjct: 463 DTAQGLEYLHHGCKPPIVHRDVKPTNILLNENFQAKLADFGLS--KILPTDGTTHVSTVV 522

Query: 141 EGTNGCIDPQ 151
            G+ G +DP+
Sbjct: 523 AGSPGYLDPE 529

[Close]

BLAST of Lag0031434 vs. NCBI nr
Match: XP_023878420.1 (LRR receptor-like serine/threonine-protein kinase IOS1 isoform X2 [Quercus suber])

HSP 1 Score: 142.9 bits (359), Expect = 2.2e-30
Identity = 66/130 (50.77%), Postives = 96/130 (73.85%), Query Frame = 0


Query: 21  ILTKVYHKKLIKLIGYCEESTKLGLVYEFMANGDLRKNLTDADQSCSTKLTWRRRLGIGI 80
           +L +V+HK L  LIGYC E T++GL+YE+MANGDL  +L+DAD +    L W+ RL + +
Sbjct: 615 LLLRVHHKNLTSLIGYCYEGTQMGLIYEYMANGDLETHLSDADNNVKI-LCWKDRLQVAL 674

Query: 81  DVAKALEYLHQGCEPPIIHRNVMSSNILLSENFEAKVSEFSLAVDLILSHNGESHVSVNI 140
           D A+ LEYLH GC+PPI+HR+V  +NILL+ENF+AK+++F L+   IL  +G +HVS  +
Sbjct: 675 DTAQGLEYLHHGCKPPIVHRDVKPTNILLNENFQAKLADFGLS--KILPTDGTTHVSTVV 734

Query: 141 EGTNGCIDPQ 151
            G+ G +DP+
Sbjct: 735 AGSPGYLDPE 741

[Close]

BLAST of Lag0031434 vs. NCBI nr
Match: XP_023878419.1 (LRR receptor-like serine/threonine-protein kinase IOS1 isoform X1 [Quercus suber])

HSP 1 Score: 142.9 bits (359), Expect = 2.2e-30
Identity = 66/130 (50.77%), Postives = 96/130 (73.85%), Query Frame = 0


Query: 21  ILTKVYHKKLIKLIGYCEESTKLGLVYEFMANGDLRKNLTDADQSCSTKLTWRRRLGIGI 80
           +L +V+HK L  LIGYC E T++GL+YE+MANGDL  +L+DAD +    L W+ RL + +
Sbjct: 620 LLLRVHHKNLTSLIGYCYEGTQMGLIYEYMANGDLETHLSDADNNVKI-LCWKDRLQVAL 679

Query: 81  DVAKALEYLHQGCEPPIIHRNVMSSNILLSENFEAKVSEFSLAVDLILSHNGESHVSVNI 140
           D A+ LEYLH GC+PPI+HR+V  +NILL+ENF+AK+++F L+   IL  +G +HVS  +
Sbjct: 680 DTAQGLEYLHHGCKPPIVHRDVKPTNILLNENFQAKLADFGLS--KILPTDGTTHVSTVV 739

Query: 141 EGTNGCIDPQ 151
            G+ G +DP+
Sbjct: 740 AGSPGYLDPE 746

[Close]

BLAST of Lag0031434 vs. ExPASy Swiss-Prot
Match: C0LGG3 (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana OX=3702 GN=At1g51820 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-29
Identity = 60/130 (46.15%), Postives = 93/130 (71.54%), Query Frame = 0


Query: 21  ILTKVYHKKLIKLIGYCEESTKLGLVYEFMANGDLRKNLTDADQSCSTKLTWRRRLGIGI 80
           +L +V+HK L+ L+GYC+E   L L+YE+MANGDL+++++         L W  RL I I
Sbjct: 625 LLLRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLKEHMSGTRNRFI--LNWGTRLKIVI 684

Query: 81  DVAKALEYLHQGCEPPIIHRNVMSSNILLSENFEAKVSEFSLAVDLILSHNGESHVSVNI 140
           + A+ LEYLH GC+PP++HR+V ++NILL+E+FEAK+++F L+   ++   GE+HVS  +
Sbjct: 685 ESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLI--EGETHVSTVV 744

Query: 141 EGTNGCIDPQ 151
            GT G +DP+
Sbjct: 745 AGTPGYLDPE 750

[Close]

BLAST of Lag0031434 vs. ExPASy Swiss-Prot
Match: Q9FZB1 (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana OX=3702 GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.4e-29
Identity = 57/130 (43.85%), Postives = 92/130 (70.77%), Query Frame = 0


Query: 21  ILTKVYHKKLIKLIGYCEESTKLGLVYEFMANGDLRKNLTDADQSCSTKLTWRRRLGIGI 80
           +L +V+H+ L+ L+GYC++   L L+YE+MANGDL++N+  + +     LTW  R+ I +
Sbjct: 612 LLLRVHHRNLVGLVGYCDDGDNLALIYEYMANGDLKENM--SGKRGGNVLTWENRMQIAV 671

Query: 81  DVAKALEYLHQGCEPPIIHRNVMSSNILLSENFEAKVSEFSLAVDLILSHNGESHVSVNI 140
           + A+ LEYLH GC PP++HR+V ++NILL+E + AK+++F L+    +  +GESHVS  +
Sbjct: 672 EAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPV--DGESHVSTVV 731

Query: 141 EGTNGCIDPQ 151
            GT G +DP+
Sbjct: 732 AGTPGYLDPE 737

[Close]

BLAST of Lag0031434 vs. ExPASy Swiss-Prot
Match: C0LGT5 (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana OX=3702 GN=At5g16900 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-28
Identity = 60/130 (46.15%), Postives = 86/130 (66.15%), Query Frame = 0


Query: 21  ILTKVYHKKLIKLIGYCEESTKLGLVYEFMANGDLRKNLTDADQSCSTKLTWRRRLGIGI 80
           +L +V+H  L+ L+GYC+E   L L+YE+MANGDL+ +L+     C  K  W  RL I +
Sbjct: 620 LLLRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHLSGKHGDCVLK--WENRLSIAV 679

Query: 81  DVAKALEYLHQGCEPPIIHRNVMSSNILLSENFEAKVSEFSLAVDLILSHNGESHVSVNI 140
           + A  LEYLH GC+P ++HR+V S NILL E+F+AK+++F L+     S   ESHVS  +
Sbjct: 680 ETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRS--FSVGEESHVSTGV 739

Query: 141 EGTNGCIDPQ 151
            GT G +DP+
Sbjct: 740 VGTPGYLDPE 745

[Close]

BLAST of Lag0031434 vs. ExPASy Swiss-Prot
Match: Q9LIG2 (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana OX=3702 GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.2e-28
Identity = 58/130 (44.62%), Postives = 92/130 (70.77%), Query Frame = 0


Query: 21  ILTKVYHKKLIKLIGYCEESTKLGLVYEFMANGDLRKNLTDADQSCSTKLTWRRRLGIGI 80
           +L +V+HK L+ L+GYC+E   L L+YE+MANGDLR+++  + +   + L W  RL I +
Sbjct: 639 LLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHM--SGKRGGSILNWETRLKIVV 698

Query: 81  DVAKALEYLHQGCEPPIIHRNVMSSNILLSENFEAKVSEFSLAVDLILSHNGESHVSVNI 140
           + A+ LEYLH GC+PP++HR+V ++NILL+E+  AK+++F L+    +   GE+HVS  +
Sbjct: 699 ESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPI--EGETHVSTVV 758

Query: 141 EGTNGCIDPQ 151
            GT G +DP+
Sbjct: 759 AGTPGYLDPE 764

[Close]

BLAST of Lag0031434 vs. ExPASy Swiss-Prot
Match: C0LGG4 (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana OX=3702 GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 2.2e-28
Identity = 57/130 (43.85%), Postives = 90/130 (69.23%), Query Frame = 0


Query: 21  ILTKVYHKKLIKLIGYCEESTKLGLVYEFMANGDLRKNLTDADQSCSTKLTWRRRLGIGI 80
           +L +V+H+ L+ L+GYC++   L L+YE+MANGDLR+N+  + +     LTW  R+ I +
Sbjct: 630 LLLRVHHRHLVGLVGYCDDGDNLALIYEYMANGDLRENM--SGKRGGNVLTWENRMQIAV 689

Query: 81  DVAKALEYLHQGCEPPIIHRNVMSSNILLSENFEAKVSEFSLAVDLILSHNGESHVSVNI 140
           + A+ LEYLH GC PP++HR+V ++NILL+E   AK+++F L+    +  +GE HVS  +
Sbjct: 690 EAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFPI--DGECHVSTVV 749

Query: 141 EGTNGCIDPQ 151
            GT G +DP+
Sbjct: 750 AGTPGYLDPE 755

The following BLAST results are available for this feature:

BLAST of Lag0031434 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146864.1	2.2e-41	68.70	probable LRR receptor-like serine/threonine-protein kinase At1g51880 [Cucumis sa...	[more]
XP_022955772.1	1.0e-35	58.78	probable LRR receptor-like serine/threonine-protein kinase At1g51880 [Cucurbita ...	[more]
KAF3972138.1	1.7e-30	51.54	hypothetical protein CMV_004332 [Castanea mollissima]	[more]
XP_023878420.1	2.2e-30	50.77	LRR receptor-like serine/threonine-protein kinase IOS1 isoform X2 [Quercus suber...	[more]
XP_023878419.1	2.2e-30	50.77	LRR receptor-like serine/threonine-protein kinase IOS1 isoform X1 [Quercus suber...	[more]

BLAST of Lag0031434 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C0LGG3	1.5e-29	46.15	Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidop...	[more]
Q9FZB1	4.4e-29	43.85	Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidop...	[more]
C0LGT5	1.3e-28	46.15	Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidop...	[more]
Q9LIG2	2.2e-28	44.62	Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana OX=3702 GN=At3g21...	[more]
C0LGG4	2.2e-28	43.85	Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidop...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020635	Tyrosine-protein kinase, catalytic domain	SMART	SM00219	tyrkin_6	coord: 5..147 e-value: 0.002 score: -124.5
None	No IPR available	GENE3D	3.30.200.20	Phosphorylase Kinase; domain 1	coord: 14..50 e-value: 1.2E-7 score: 33.8
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 51..150 e-value: 3.6E-23 score: 83.8
None	No IPR available	PANTHER	PTHR45631	OS07G0107800 PROTEIN-RELATED	coord: 21..150
None	No IPR available	PANTHER	PTHR45631:SF113	LEUCINE-RICH REPEAT PROTEIN KINASE	coord: 21..150
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain	PFAM	PF07714	PK_Tyr_Ser-Thr	coord: 21..126 e-value: 9.6E-21 score: 74.2
IPR000719	Protein kinase domain	PROSITE	PS50011	PROTEIN_KINASE_DOM	coord: 1..150 score: 18.5205
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 20..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0031434.1	Lag0031434.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016020	membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004713	protein tyrosine kinase activity
molecular_function	GO:0004672	protein kinase activity