Lag0031425 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0031425
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr11: 8326223 .. 8327982 (+)
RNA-Seq ExpressionLag0031425
SyntenyLag0031425
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTGGCGGCAGGCGACGGCAACGGCAAGGGCGGCGGCTGCAAGAGGCGATGGCTGCAAGAGGCGACGGCTAGGTTTCAAGAAGAGAGAAAGGGTTTTTCGGGGGTGGGGGAGAAAGAGGAGAGTAGGGATTTTTTTTTAATTATTAATTATATTTTTATTTTAAAATTATTTTAATTTAAAATTTATTATTTTATTACTTTTAACTGCCACGTCAACACTAGAAGCATTTTCGAAATAGTAGGGACTTAATTGTTCGATTTTGAAACCTAGGGACCTATTGGAAACGAACCTGAAACATGAGGGACCAAAAAAGTATTTTACCCTAAAAACAAAAAGGAACCATGCATTTGATTTTTTTCTCTCTGTACGAGAGTGCTCTCAGTCGGTGACTGCTTTGTCAAGGATTCTTTGAATTCTTGCGGTTTTCTAGTGTGGGTTGGACGGTTCGCTGGTGCGCTATGGAGGAGACAACGATTCTTGATGACTGGAAGAAACTGAGGTTGACATCGGATGAAGAAGAAGTTGCGGTGGATGTGGACAGTGAGGCGATTTCTAACACGATCGGCCGCATTAAGTTTTGCCTGGCAGGGAAGTTGCTTAGTCCTCGTCAGATTGGAAGTGAGATTCTACGTCGGACACTTTCCATTGCGTGGAGGGTGGGTGTGGGTCTCCAGGTTGAAAGAATTGGGCAGAATGTATTTCTGTTTTCTTTCTCTAATGTTGCAGATCGTAATCGAGTGTTTCACACGGGCCCATGGTTCTTTGATAAATTCTTGCTCGTGTTGGAGATGATGGGGCCGCTTGACAAGCCGTCTGATCTTCGGTTTGATTTTGTGGCTTTTTGGCTACACTTTTATGATTTACCTATGGCCTGTATGAATGCTACCATGGCTCGAAAACTGGGTAATGCAGTTGGTCGTTTTGAGGATGTGGACTGTAATGCGGATGGACTTTGTTGGGGTGCTAGCTTGCGGGTTCGTGTGCGCATTGATATTACGAAACCTTTGCGGCGTGGGATCAAGATTAATGTTGATGGTCCTATCGGTGGTTGTTGGATCCCAATTAAGTTTGAAAAGCTTCCGGAATTTTGTTCGCGTTGCGGTTTGTTGGGTCATGGTGCAAATGATTGCTCTCTGGTTTTCTCCTCGGCTGATGGTGGCTCTGTGTTGAAGCATGAGTATGGTTCTTGGCTGCGTTATGAGGGACCTCCAAGAAATCAAGGTATTGCACGCCTGGGGAAGAAAGTCGCGGTTGAGGATGCTATAACTCCCCAGATTTCATCGCCGTCGTCGGAGGATCGGTCGCCGGCTGTAGGCGCTGGCCATGATGTAGTTGGCGAGGTCCCTATAATCCCGGCGATCGTGGAGCCGAAGCAAGATAGTGTGAAATCGGTTATTGGGGGAGACGTGGGTGCTGCTGTTGAGACAGTTCAGGAGGGTACCTCTGTGGGGCCTGCGGTTGATGAGCATTGTTTGGGTAGTGGGCCGAAGGCTGCGGTGATGGGGCGTGTGGTTCCGATTGGGCCGCACTATTTGATTGGGGCAACCACTAAATGGAAGCGCAATGCGCGTATGGGTCCCACGGTTTCTTCAAATGATGGTGACGTGGCTTCCAAGCGTAAGGGCCTTCCGTTGACTCCTAGTACTGTCTGCAAAAGGGCAAAAACGTCTGATGTTGCTTGTGTTGATGCTTGTGTTGATGATGGTACCGATCTTTCTGGTGTATCGGCGGTGGCTGAAGAGCAGCCCCGCTAG

mRNA sequence

ATGAAGGTGGCGGCAGGCGACGGCAACGGCAAGGGCGGCGGCTGCAAGAGGCGATGGCTGCAAGAGGCGACGGCTAGTGTGGGTTGGACGGTTCGCTGGTGCGCTATGGAGGAGACAACGATTCTTGATGACTGGAAGAAACTGAGGTTGACATCGGATGAAGAAGAAGTTGCGGTGGATGTGGACAGTGAGGCGATTTCTAACACGATCGGCCGCATTAAGTTTTGCCTGGCAGGGAAGTTGCTTAGTCCTCGTCAGATTGGAAGTGAGATTCTACGTCGGACACTTTCCATTGCGTGGAGGGTGGGTGTGGGTCTCCAGGTTGAAAGAATTGGGCAGAATGTATTTCTGTTTTCTTTCTCTAATGTTGCAGATCGTAATCGAGTGTTTCACACGGGCCCATGGTTCTTTGATAAATTCTTGCTCGTGTTGGAGATGATGGGGCCGCTTGACAAGCCGTCTGATCTTCGGTTTGATTTTGTGGCTTTTTGGCTACACTTTTATGATTTACCTATGGCCTGTATGAATGCTACCATGGCTCGAAAACTGGGTAATGCAGTTGGTCGTTTTGAGGATGTGGACTGTAATGCGGATGGACTTTGTTGGGGTGCTAGCTTGCGGGTTCGTGTGCGCATTGATATTACGAAACCTTTGCGGCGTGGGATCAAGATTAATGTTGATGGTCCTATCGGTGGTTGTTGGATCCCAATTAAGTTTGAAAAGCTTCCGGAATTTTGTTCGCGTTGCGGTTTGTTGGGTCATGGTGCAAATGATTGCTCTCTGGTTTTCTCCTCGGCTGATGGTGGCTCTGTGTTGAAGCATGAGTATGGTTCTTGGCTGCGTTATGAGGGACCTCCAAGAAATCAAGGTATTGCACGCCTGGGGAAGAAAGTCGCGGTTGAGGATGCTATAACTCCCCAGATTTCATCGCCGTCGTCGGAGGATCGGTCGCCGGCTGTAGGCGCTGGCCATGATGTAGTTGGCGAGGTCCCTATAATCCCGGCGATCGTGGAGCCGAAGCAAGATAGTGTGAAATCGGTTATTGGGGGAGACGTGGGTGCTGCTGTTGAGACAGTTCAGGAGGGTACCTCTGTGGGGCCTGCGGTTGATGAGCATTGTTTGGGTAGTGGGCCGAAGGCTGCGGTGATGGGGCGTGTGGTTCCGATTGGGCCGCACTATTTGATTGGGGCAACCACTAAATGGAAGCGCAATGCGCGTATGGGTCCCACGGTTTCTTCAAATGATGGTGACGTGGCTTCCAAGCGTAAGGGCCTTCCGTTGACTCCTAGTACTGTCTGCAAAAGGGCAAAAACGTCTGATGTTGCTTGTGTTGATGCTTGTGTTGATGATGGTACCGATCTTTCTGGTGTATCGGCGGTGGCTGAAGAGCAGCCCCGCTAG

Coding sequence (CDS)

ATGAAGGTGGCGGCAGGCGACGGCAACGGCAAGGGCGGCGGCTGCAAGAGGCGATGGCTGCAAGAGGCGACGGCTAGTGTGGGTTGGACGGTTCGCTGGTGCGCTATGGAGGAGACAACGATTCTTGATGACTGGAAGAAACTGAGGTTGACATCGGATGAAGAAGAAGTTGCGGTGGATGTGGACAGTGAGGCGATTTCTAACACGATCGGCCGCATTAAGTTTTGCCTGGCAGGGAAGTTGCTTAGTCCTCGTCAGATTGGAAGTGAGATTCTACGTCGGACACTTTCCATTGCGTGGAGGGTGGGTGTGGGTCTCCAGGTTGAAAGAATTGGGCAGAATGTATTTCTGTTTTCTTTCTCTAATGTTGCAGATCGTAATCGAGTGTTTCACACGGGCCCATGGTTCTTTGATAAATTCTTGCTCGTGTTGGAGATGATGGGGCCGCTTGACAAGCCGTCTGATCTTCGGTTTGATTTTGTGGCTTTTTGGCTACACTTTTATGATTTACCTATGGCCTGTATGAATGCTACCATGGCTCGAAAACTGGGTAATGCAGTTGGTCGTTTTGAGGATGTGGACTGTAATGCGGATGGACTTTGTTGGGGTGCTAGCTTGCGGGTTCGTGTGCGCATTGATATTACGAAACCTTTGCGGCGTGGGATCAAGATTAATGTTGATGGTCCTATCGGTGGTTGTTGGATCCCAATTAAGTTTGAAAAGCTTCCGGAATTTTGTTCGCGTTGCGGTTTGTTGGGTCATGGTGCAAATGATTGCTCTCTGGTTTTCTCCTCGGCTGATGGTGGCTCTGTGTTGAAGCATGAGTATGGTTCTTGGCTGCGTTATGAGGGACCTCCAAGAAATCAAGGTATTGCACGCCTGGGGAAGAAAGTCGCGGTTGAGGATGCTATAACTCCCCAGATTTCATCGCCGTCGTCGGAGGATCGGTCGCCGGCTGTAGGCGCTGGCCATGATGTAGTTGGCGAGGTCCCTATAATCCCGGCGATCGTGGAGCCGAAGCAAGATAGTGTGAAATCGGTTATTGGGGGAGACGTGGGTGCTGCTGTTGAGACAGTTCAGGAGGGTACCTCTGTGGGGCCTGCGGTTGATGAGCATTGTTTGGGTAGTGGGCCGAAGGCTGCGGTGATGGGGCGTGTGGTTCCGATTGGGCCGCACTATTTGATTGGGGCAACCACTAAATGGAAGCGCAATGCGCGTATGGGTCCCACGGTTTCTTCAAATGATGGTGACGTGGCTTCCAAGCGTAAGGGCCTTCCGTTGACTCCTAGTACTGTCTGCAAAAGGGCAAAAACGTCTGATGTTGCTTGTGTTGATGCTTGTGTTGATGATGGTACCGATCTTTCTGGTGTATCGGCGGTGGCTGAAGAGCAGCCCCGCTAG

Protein sequence

MKVAAGDGNGKGGGCKRRWLQEATASVGWTVRWCAMEETTILDDWKKLRLTSDEEEVAVDVDSEAISNTIGRIKFCLAGKLLSPRQIGSEILRRTLSIAWRVGVGLQVERIGQNVFLFSFSNVADRNRVFHTGPWFFDKFLLVLEMMGPLDKPSDLRFDFVAFWLHFYDLPMACMNATMARKLGNAVGRFEDVDCNADGLCWGASLRVRVRIDITKPLRRGIKINVDGPIGGCWIPIKFEKLPEFCSRCGLLGHGANDCSLVFSSADGGSVLKHEYGSWLRYEGPPRNQGIARLGKKVAVEDAITPQISSPSSEDRSPAVGAGHDVVGEVPIIPAIVEPKQDSVKSVIGGDVGAAVETVQEGTSVGPAVDEHCLGSGPKAAVMGRVVPIGPHYLIGATTKWKRNARMGPTVSSNDGDVASKRKGLPLTPSTVCKRAKTSDVACVDACVDDGTDLSGVSAVAEEQPR
Homology
BLAST of Lag0031425 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 303.5 bits (776), Expect = 3.1e-78
Identity = 143/281 (50.89%), Postives = 191/281 (67.97%), Query Frame = 0

Query: 36  MEETTILDDWKKLRLTSDEEEVAVDVDSEAISNTIGRIKFCLAGKLLSPRQIGSEILRRT 95
           M+   +L DW+K +LTS+E+E+A+DVD +A+      + + L GKLL+ R I +++L R 
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 96  LSIAWRVGVGLQVERIGQNVFLFSFSNVADRNRVFHTGPWFFDKFLLVLEMMGPLDKPSD 155
           L +AW+V   L VE IG+N+FLF F    D NRV  TGPWFFDK L+VL+        S+
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 156 LRFDFVAFWLHFYDLPMACMNATMARKLGNAVGRFEDVDCNADGLCWGASLRVRVRIDIT 215
           L F+ VAFW+H +DLPM+ +N TMA +LGNA+G F DVDCN  G  WGASLR+RV IDIT
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 216 KPLRRGIKINVDGPIGGCWIPIKFEKLPEFCSRCGLLGHGANDCSLVFSSADGGSVLKHE 275
           KPLRRGIKIN+DGP+GGCWIPI++E+LP+FC  CG++GH ++DC   + +A   S    E
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

Query: 276 YGSWLRYEGPPRNQGIARLGKKVAVEDAITPQISSPSSEDR 317
           YG WLR+ G        R GK  A ED+     SS +S++R
Sbjct: 241 YGPWLRFVGSKAGAQKGRKGKSPAREDSCGS--SSMNSKER 279

BLAST of Lag0031425 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 269.6 bits (688), Expect = 5.0e-68
Identity = 124/258 (48.06%), Postives = 175/258 (67.83%), Query Frame = 0

Query: 36  MEETTILDDWKKLRLTSDEEEVAVDVDSEAISNTIGRIKFCLAGKLLSPRQIGSEILRRT 95
           M  + +L++WK  +LTS+E+++AVD+DS A+  T   ++  L  KLLS R I   +L+ T
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 96  LSIAWRVGV-GLQVERIGQNVFLFSFSNVADRNRVFHTGPWFFDKFLLVLEMMGPLDKPS 155
           L IAW++      V+ IG N+FLF+F+  +DRNR+   GPW FD+ L++++    L KP 
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 156 DLRFDFVAFWLHFYDLPMACMNATMARKLGNAVGRFEDVDCNADGLCWGASLRVRVRIDI 215
           D+ F  V+ W+HF+DL +ACMN TMA +LGNA+G FEDV+ NA+  CWG+ LRVRVR D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 216 TKPLRRGIKINVDGPIGGCWIPIKFEKLPEFCSRCGLLGHGANDCSLVFSSADGGSVLKH 275
            KPL RGIK+N+DGP+GGCWIPI++E+LP+F   CG L H   DC    S     SV K+
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDC----SDCCVDSVSKN 240

Query: 276 -EYGSWLRYEGPPRNQGI 292
            +YG WLR++G   +  I
Sbjct: 241 LQYGPWLRFQGHKNSSNI 254

BLAST of Lag0031425 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 250.0 bits (637), Expect = 4.1e-62
Identity = 126/305 (41.31%), Postives = 182/305 (59.67%), Query Frame = 0

Query: 41  ILDDWKKLRLTSDEEEVAVDVDSEAISNTIGRIKFCLAGKLLSPRQIGSEILRRTLSIAW 100
           +L++WK  +LTS+EEE A+DVD+ A + T  R++  L GKL   R I   +++ T+  AW
Sbjct: 6   LLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTAW 65

Query: 101 RV-GVGLQVERIGQNVFLFSFSNVADRNRVFHTGPWFFDKFLLVLEMMGPLDKPSDLRFD 160
           ++     +V+ +G N+FLFSF+   DRN+++ +GPW FD+ L+++     L  PS+L F 
Sbjct: 66  KLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDFT 125

Query: 161 FVAFWLHFYDLPMACMNATMARKLGNAVGRFEDVDCNADGLCWGASLRVRVRIDITKPLR 220
            +  W+ F+DLP+ C+   MA +LGNA+G FE+ DC+     WG++LRVRV +DI+KPLR
Sbjct: 126 KLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPLR 185

Query: 221 RGIKINVDGPIGGCWIPIKFEKLPEFCSRCGLLGHGANDCSLVFSSADGGSVLKHEYGSW 280
           RGIK+N+DGPIGG WIPI++E+LP+FC  CGL                  S  KH+YGSW
Sbjct: 186 RGIKLNLDGPIGGAWIPIQYERLPDFCYHCGL----------------SSSRKKHQYGSW 245

Query: 281 LRYEGPPRNQGIARLGKKVAVEDAITPQISSPSSEDRSPAVGAGHDVVGEVPIIPAIVEP 340
           LRY+G  +         K   ED +    ++  S   SP VGAG   V   P    I  P
Sbjct: 246 LRYQGTVKP---TMPQMKQPQEDLLDKSGNNSFSSSTSP-VGAGSQGVQSAPATGPIAIP 290

Query: 341 KQDSV 345
            +  V
Sbjct: 306 MESPV 290

BLAST of Lag0031425 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])

HSP 1 Score: 212.6 bits (540), Expect = 7.2e-51
Identity = 124/338 (36.69%), Postives = 180/338 (53.25%), Query Frame = 0

Query: 40  TILDDWKKLRLTSDEEEVAVDVDSEAISNTIGRIKFCLAGKLLSPRQIGSEILRRTLSIA 99
           ++LD  + L LTS EE+  V +  E+ S  +G+   CL GKLL+ R    E ++ TL   
Sbjct: 4   SLLDLTRTLSLTS-EEDAVVRIGGESTSLMMGKSDMCLVGKLLTRRPFNVEAMKNTLLSV 63

Query: 100 WRVGVGLQVERIGQNVFLFSFSNVADRNRVFHTGPWFFDKFLLVLEMMGPLDKPSDLRFD 159
           W+   G+QV  IG N+F+F F +V D+ RV   GPW FDK LL+L  M P  +PSD++  
Sbjct: 64  WQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSDGPWTFDKHLLMLGEMDPNVQPSDIQLT 123

Query: 160 FVAFWLHFYDLPMACMNATMARKLGNAVGRFEDVDCNADGLCWGASLRVRVRIDITKPLR 219
            V FW+H  +LP+  MN  +   +GNAVG+F D+D    G+ WG ++R+RV +D+ KPLR
Sbjct: 124 RVQFWVHVCNLPLVLMNKKVGEIVGNAVGQFIDMDYEDGGIVWGRTMRIRVALDVRKPLR 183

Query: 220 RGIKINVDG--PIGGCWIPIKFEKLPEFCSRCGLLGHGANDCSLVFSSADGGSVLKHEYG 279
           RG+K+ +    PI   W+  K+E+LP +C  CG LGH   +C    SSADG  V   +YG
Sbjct: 184 RGMKLALSSAEPI---WVDFKYERLPIYCYFCGRLGHSERECDDKLSSADGSRVDSLQYG 243

Query: 280 SWLRYEGPPRNQGIARLGKKVAVEDAITPQISSPSSEDRSPAVGAGHDVVGEVPIIPAIV 339
           +WLR +   +++G  R G       +I   +       +   +   H  V +    P   
Sbjct: 244 AWLRMDN-IKSKGSRRAG-------SIDKGVGGTHPGGQGIPLRTNHAQVNQEEGAPLRA 303

Query: 340 EPKQDSVKSVIGGD----VGAAVETVQEGTSVGPAVDE 372
            P +  V+S    D     G  +  V EG   G AV E
Sbjct: 304 SPTRVPVESDRRRDRKEISGQTLTPVIEGADQGTAVYE 329

BLAST of Lag0031425 vs. NCBI nr
Match: XP_028124075.1 (uncharacterized protein LOC114321128 [Camellia sinensis])

HSP 1 Score: 211.8 bits (538), Expect = 1.2e-50
Identity = 106/258 (41.09%), Postives = 156/258 (60.47%), Query Frame = 0

Query: 40  TILDDWKKLRLTSDEEEVAVDVDSEAISNTIGRIKFCLAGKLLSPRQIGSEILRRTLSIA 99
           +++D  + L LTS EE+  V +  ++ S  +G+   CL GKLL+ R    E ++ TL   
Sbjct: 4   SLVDLTRTLSLTS-EEDAVVRIGGDSTSLMMGKSDMCLVGKLLTRRPFNVEAMKNTLLSV 63

Query: 100 WRVGVGLQVERIGQNVFLFSFSNVADRNRVFHTGPWFFDKFLLVLEMMGPLDKPSDLRFD 159
           W+   G+QV  IG N+F+F F +V D+ RV   GPW FDK LL+L  M P  +PSD++  
Sbjct: 64  WQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSNGPWTFDKHLLMLGEMDPNVQPSDIQLT 123

Query: 160 FVAFWLHFYDLPMACMNATMARKLGNAVGRFEDVDCNADGLCWGASLRVRVRIDITKPLR 219
            V FW+H  +LP+  MN  + + +GNAVG+F D+D    G+ WG ++R+RV ID+ KPLR
Sbjct: 124 GVQFWVHVCNLPLVLMNKQVGQIVGNAVGQFIDMDYEDGGIAWGRTMRIRVAIDVRKPLR 183

Query: 220 RGIKINVDG--PIGGCWIPIKFEKLPEFCSRCGLLGHGANDCSLVFSSADGGSVLKHEYG 279
           RG+K+ +    PI   W+  K+E+LP +C  CG LGH   +C    S ADG  V   +YG
Sbjct: 184 RGMKLALSSADPI---WVDFKYERLPIYCYFCGRLGHSDRECDDKLSFADGTRVDSLQYG 243

Query: 280 SWLRYEGPPRNQGIARLG 296
           +WLR +   +++G  R G
Sbjct: 244 AWLRMDN-IKSKGSRRAG 256

BLAST of Lag0031425 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 1.5e-78
Identity = 143/281 (50.89%), Postives = 191/281 (67.97%), Query Frame = 0

Query: 36  MEETTILDDWKKLRLTSDEEEVAVDVDSEAISNTIGRIKFCLAGKLLSPRQIGSEILRRT 95
           M+   +L DW+K +LTS+E+E+A+DVD +A+      + + L GKLL+ R I +++L R 
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 96  LSIAWRVGVGLQVERIGQNVFLFSFSNVADRNRVFHTGPWFFDKFLLVLEMMGPLDKPSD 155
           L +AW+V   L VE IG+N+FLF F    D NRV  TGPWFFDK L+VL+        S+
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 156 LRFDFVAFWLHFYDLPMACMNATMARKLGNAVGRFEDVDCNADGLCWGASLRVRVRIDIT 215
           L F+ VAFW+H +DLPM+ +N TMA +LGNA+G F DVDCN  G  WGASLR+RV IDIT
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 216 KPLRRGIKINVDGPIGGCWIPIKFEKLPEFCSRCGLLGHGANDCSLVFSSADGGSVLKHE 275
           KPLRRGIKIN+DGP+GGCWIPI++E+LP+FC  CG++GH ++DC   + +A   S    E
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

Query: 276 YGSWLRYEGPPRNQGIARLGKKVAVEDAITPQISSPSSEDR 317
           YG WLR+ G        R GK  A ED+     SS +S++R
Sbjct: 241 YGPWLRFVGSKAGAQKGRKGKSPAREDSCGS--SSMNSKER 279

BLAST of Lag0031425 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.4e-68
Identity = 124/258 (48.06%), Postives = 175/258 (67.83%), Query Frame = 0

Query: 36  MEETTILDDWKKLRLTSDEEEVAVDVDSEAISNTIGRIKFCLAGKLLSPRQIGSEILRRT 95
           M  + +L++WK  +LTS+E+++AVD+DS A+  T   ++  L  KLLS R I   +L+ T
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 96  LSIAWRVGV-GLQVERIGQNVFLFSFSNVADRNRVFHTGPWFFDKFLLVLEMMGPLDKPS 155
           L IAW++      V+ IG N+FLF+F+  +DRNR+   GPW FD+ L++++    L KP 
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 156 DLRFDFVAFWLHFYDLPMACMNATMARKLGNAVGRFEDVDCNADGLCWGASLRVRVRIDI 215
           D+ F  V+ W+HF+DL +ACMN TMA +LGNA+G FEDV+ NA+  CWG+ LRVRVR D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 216 TKPLRRGIKINVDGPIGGCWIPIKFEKLPEFCSRCGLLGHGANDCSLVFSSADGGSVLKH 275
            KPL RGIK+N+DGP+GGCWIPI++E+LP+F   CG L H   DC    S     SV K+
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDC----SDCCVDSVSKN 240

Query: 276 -EYGSWLRYEGPPRNQGI 292
            +YG WLR++G   +  I
Sbjct: 241 LQYGPWLRFQGHKNSSNI 254

BLAST of Lag0031425 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.0e-62
Identity = 126/305 (41.31%), Postives = 182/305 (59.67%), Query Frame = 0

Query: 41  ILDDWKKLRLTSDEEEVAVDVDSEAISNTIGRIKFCLAGKLLSPRQIGSEILRRTLSIAW 100
           +L++WK  +LTS+EEE A+DVD+ A + T  R++  L GKL   R I   +++ T+  AW
Sbjct: 6   LLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTAW 65

Query: 101 RV-GVGLQVERIGQNVFLFSFSNVADRNRVFHTGPWFFDKFLLVLEMMGPLDKPSDLRFD 160
           ++     +V+ +G N+FLFSF+   DRN+++ +GPW FD+ L+++     L  PS+L F 
Sbjct: 66  KLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDFT 125

Query: 161 FVAFWLHFYDLPMACMNATMARKLGNAVGRFEDVDCNADGLCWGASLRVRVRIDITKPLR 220
            +  W+ F+DLP+ C+   MA +LGNA+G FE+ DC+     WG++LRVRV +DI+KPLR
Sbjct: 126 KLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPLR 185

Query: 221 RGIKINVDGPIGGCWIPIKFEKLPEFCSRCGLLGHGANDCSLVFSSADGGSVLKHEYGSW 280
           RGIK+N+DGPIGG WIPI++E+LP+FC  CGL                  S  KH+YGSW
Sbjct: 186 RGIKLNLDGPIGGAWIPIQYERLPDFCYHCGL----------------SSSRKKHQYGSW 245

Query: 281 LRYEGPPRNQGIARLGKKVAVEDAITPQISSPSSEDRSPAVGAGHDVVGEVPIIPAIVEP 340
           LRY+G  +         K   ED +    ++  S   SP VGAG   V   P    I  P
Sbjct: 246 LRYQGTVKP---TMPQMKQPQEDLLDKSGNNSFSSSTSP-VGAGSQGVQSAPATGPIAIP 290

Query: 341 KQDSV 345
            +  V
Sbjct: 306 MESPV 290

BLAST of Lag0031425 vs. ExPASy TrEMBL
Match: A0A1R3GTB5 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23588 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.2e-46
Identity = 98/247 (39.68%), Postives = 143/247 (57.89%), Query Frame = 0

Query: 41  ILDDWKKLRLTSDEEEVAVDVDSEAISNTIGRIKFCLAGKLLSPRQIGSEILRRTLSIAW 100
           + D W+   LT +EE + V VD   +  T+     CL GKLLS R +  E++R  + + W
Sbjct: 5   LTDLWENFNLT-EEENLEVAVDPRLVDETLAEGNNCLIGKLLSRRPVNVEVMRNVMHMVW 64

Query: 101 RVGVGLQVERIGQNVFLFSFSNVADRNRVFHTGPWFFDKFLLVLEMMGPLDKPSDLRFDF 160
           ++  GLQV  IG+N+F+F F +  ++ RV+   PW F+K LLVL+     D   D++ D 
Sbjct: 65  KLAGGLQVREIGENLFIFQFESDLEKERVYQQTPWNFNKALLVLKSYDAYDCVEDIKLDG 124

Query: 161 VAFWLHFYDLPMACMNATMARKLGNAVGRFEDVDCNADGLCWGASLRVRVRIDITKPLRR 220
            +FW   +DLP+  MN ++ R +G + G  E++D   D + WG  LR R R+++TKPLRR
Sbjct: 125 CSFWKQAHDLPLGFMNESIGRVIGESFGTVEEIDTCGDKIAWGKFLRFRARLNVTKPLRR 184

Query: 221 GIKINVDGPIGG-CWIPIKFEKLPEFCSRCGLLGHGANDC-SLVFSSADGGSVLKHEYGS 280
           G+ +    P GG   I  ++EKLP+FC  CG L H  N+C   V    D G ++K EYG 
Sbjct: 185 GMILT--APNGGKILISFRYEKLPDFCYVCGCLTHVENECEKAVVMRRDKGKIIK-EYGP 244

Query: 281 WLRYEGP 286
           WLR E P
Sbjct: 245 WLRAEVP 247

BLAST of Lag0031425 vs. ExPASy TrEMBL
Match: A0A1R3K847 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10561 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.6e-43
Identity = 94/271 (34.69%), Postives = 151/271 (55.72%), Query Frame = 0

Query: 45  WKKLRLTSDEEEVAVDVDSEAISNTIGRIKFCLAGKLLSPRQIGSEILRRTLSIAWRVGV 104
           W+   LT  EE + + V+   ++ ++   K CL GKLLS R +  +++R  L + W++  
Sbjct: 9   WENFNLTK-EETMEMAVNHTMVAESLAEGKLCLIGKLLSRRAVNIDVMRNVLHMVWKLSG 68

Query: 105 GLQVERIGQNVFLFSFSNVADRNRVFHTGPWFFDKFLLVLEMMGPLDKPSDLRFDFVAFW 164
           GLQV  IG+ +++F F +  ++ RV+  GPW F+K LLVL+         +++ ++ AFW
Sbjct: 69  GLQVREIGEKLYIFQFESEVEKERVYQQGPWNFNKALLVLKNYDAFISVEEIKLEWCAFW 128

Query: 165 LHFYDLPMACMNATMARKLGNAVGRFEDVDCNADGLCWGASLRVRVRIDITKPLRRGIKI 224
           +  +DLP+  M  ++ + +G++ G   ++D   D + WG  LR+R  +++ KPLRRG+ +
Sbjct: 129 IQVHDLPLGFMTESVGKAIGDSFGEVIEIDTCGDKVAWGKFLRIRACLNVNKPLRRGMIL 188

Query: 225 NVDGPIGG-CWIPIKFEKLPEFCSRCGLLGHGANDC-SLVFSSADGGSVLKHEYGSWLRY 284
               P GG   +  ++EKLP+FC  CG L H  N+C   V    D G V K EYG WLR 
Sbjct: 189 T--APNGGKILVSFRYEKLPDFCYVCGCLNHTENECEKAVIMRRDSGKV-KKEYGPWLRA 248

Query: 285 EGPPRN------QGIA--RLGKKVAVEDAIT 306
           E P  N       GI+  R GK+   +  +T
Sbjct: 249 EVPRSNTLKFDGPGISETRTGKEKDFDQTVT 275

BLAST of Lag0031425 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding )

HSP 1 Score: 75.5 bits (184), Expect = 1.3e-13
Identity = 47/210 (22.38%), Postives = 91/210 (43.33%), Query Frame = 0

Query: 55  EEVAVDVDSEAISNTIGRIKFCLAGKLLSPRQIGSEILRRTLSIAWRVGVGLQVER--IG 114
           EE  + +   A    +   +  L G++L+P+     + R  L + ++ G+G QV    + 
Sbjct: 17  EEPELYIPYHAYVGALASNRLSLLGRILNPQT--QSVERAILELPYQWGLGTQVHGRILD 76

Query: 115 QNVFLFSFSNVADRNRVFHTGPWFFDKFLLVLEMMGPLDKPSDLRFDFVAFWLHFYDLPM 174
              F   F +  D        PW F+++ + L+     D P++    F+  W+H   +P+
Sbjct: 77  DRCFQVRFRSEIDLLNGLRRAPWVFNEWFIALQRWE--DFPTEDFLTFIDVWVHIRGIPL 136

Query: 175 ACMNATMARKLGNAVGRFEDVDCNADGLCWGASLRVRVRIDITKPLRRGIKINVDGPIGG 234
             ++      + + +G    +D N +       +RV+VR+D T+PLR   ++        
Sbjct: 137 PYVSERTVEIIASTLGEVVAMDFNEETTSQITFIRVKVRMDFTEPLRFFRRVRF-ASRER 196

Query: 235 CWIPIKFEKLPEFCSRCGLLGHGANDCSLV 263
             I  ++EKL   C+ C  + H  + C  V
Sbjct: 197 AMIGFEYEKLQRVCTNCCRVNHQVSHCPYV 221

BLAST of Lag0031425 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 60.1 bits (144), Expect = 5.5e-09
Identity = 45/211 (21.33%), Postives = 80/211 (37.91%), Query Frame = 0

Query: 55  EEVAVDVDSEAISNTIGRIKFCLAGKLLS------PRQIGSEILRRTLSIAWRVGVGLQV 114
           +E+A+ V  EAI+  I      L    L+      P+ +  E++ R L I          
Sbjct: 10  QEIALGVQEEAINLLIELCDEALRKPNLASLQNRCPKNVDEEVVGRILEI---------- 69

Query: 115 ERIGQNVFLFSFSNVADRNRVFHTGPWFFDKFLLVLEMMGPLDKPSDLRFDFVAFWLHFY 174
                +   F F +      +   GPW F+ ++ V++    L   SD  F  + FW+   
Sbjct: 70  -----HKIEFLFQSEESMFSILRRGPWSFNDWMCVIQRWTKLH--SDAEFKRIPFWIQIR 129

Query: 175 DLPMACMNATMARKLGNAVGRFEDVDCNADGLCWGASLRVRVRIDITKPLRRGIKINVDG 234
            +P+  + A +   +G  +G F + +   D             + + K            
Sbjct: 130 GIPLRFLTARIITSIGERMGLFLETNLGRD-------------VSVLK------------ 170

Query: 235 PIGGCWIPIKFEKLPEFCSRCGLLGHGANDC 260
                    ++EKL  FC+ CG+L H A++C
Sbjct: 190 --------FQYEKLKNFCTTCGMLSHDASEC 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022156185.13.1e-7850.89uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
XP_022132681.15.0e-6848.06uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_022158377.14.1e-6241.31uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_028122006.17.2e-5136.69uncharacterized protein LOC114319195 [Camellia sinensis][more]
XP_028124075.11.2e-5041.09uncharacterized protein LOC114321128 [Camellia sinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DU551.5e-7850.89uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1BSZ12.4e-6848.06uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1DX302.0e-6241.31uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A1R3GTB51.2e-4639.68Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23588 PE=4 SV... [more]
A0A1R3K8471.6e-4334.69Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10561 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G36228.11.3e-1322.38nucleic acid binding;zinc ion binding [more]
AT3G42140.15.5e-0921.33zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 212..260
e-value: 6.2E-12
score: 45.0
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 67..210
e-value: 8.3E-25
score: 87.0
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 47..266
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 47..266

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0031425.1Lag0031425.1mRNA