Lag0031393 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0031393
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr11: 7905397 .. 7907400 (+)
RNA-Seq ExpressionLag0031393
SyntenyLag0031393
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAACAAATTCAGAAACAAATCAAGTTAACTCGAAACCTCACGCGCATGCAAGTGCAAAGCCTCACCTAAAGCAACCCCTACAAGTCCAAGAAAGGCTTATAAACTCCTCCACCCATCTTCCCCCTACACTGGCACAAAGGTCTCGCAAAGAAGCTAAAAGGCGCAAAAAGGGGTGTTCTCAAAACCTAGGGCCTGCAAGAGAAACAACTCATTTACTACTTTTACCACTCTAAAGATGGGGTACTAGCTTTCACGCTACAATATAGGGACCCATAACCCGGGTTTTACCCTTGGTTGGCCTAACTGAACACACTGCAGGCAGCTCTTACCCCTCTTTGGCTGGCGCTTTCAACATGCTTTTATTGAGGAGACAGGAACATGTTTTAAGAGTCTCTATGCATGCCCACGCCTCGTTTCTTTTCTTTCCCTATGACCTCTTTGTTGATGGTACATACTTTATCTCAATTAAATTATAATCTACCTAGCTTACTTTGGTTCGAGACACATTAAACATTTTATAACATTATAAAAAGAACACAATAATTAACTTACATAGGTAAGTGCAGAAGGATTATTTACCTTTGAAGCAAAGGTCATGGGATTTTTGTATTTCATTTGCTGTTTTATTTGGTGAATTGTGTCCTCATAAATCTCTTGGTTAATGCAATGTGTACAACCACATTCTTTCTCACAATAAAGTCCAGCTGAAAGGCATTCACAATATCTGCATAAATAAATAATAAGTTAAATGTAATATAAATATAATGATTAATTAGAATTTTTAATGTGAATATTTAGATAAAATTATAGAATAATATCTAGACTCAAATTTTTGTATTAAATCATTTTATCATATGTTACTTACAGTTGTACGCACTCTGATTTCTAGCCGTTGTAACGTTTGCTTGCTTTATTTTCACTCTCCAGTTTTGATTCCTTGCTATATTGCAACACAACCAACATTCAAAGAAAATTTGTTTCAAGAAAAAAAAAACATTCAAAGATAATTCAAATACTTAAAAAAAAAAAAAAAAAAAACTCTTTTTACTTCTAAAACTTATCCATTTGATTTCATTTAATTTAATTGAACTCTAATTTCAACAAATATCAAGTTTTGCATAAGATTAAGTATAAGATTCTATTTGTGGACGACAGTCTAGTATTTTGCAGAGCTAATGAACAGGAGCTCATCCATCTAAAAGGCTTGCTGAACCTTTATGAAGCTGCCTCAGGTGAGAGTATCAATTTCTCGAAGTCTGCCATTCTTTTTCCTAAAGGCACCAACCAAGATAGAGGGAACTACCTTAGTAGCTTACTGGGAGTTAATTGCGTGGAAGACCTTGGCAACTATTTGGGCATTCCTTCTGTCCTTACAAGAAACAAGACAAAAGACTTCAGTTTTATCATTGACAAGCTGTGGAAGACCTTAAGTGGTTGGAAACAATTTTTTTTTCTCAGCTGCGGGCAAAGAAGTCTTAATCAAAAGTGTGGGGCAAGCAATACCATCATATTTGATGAGTATTTTCAAACTTCGAAAGCGTCTACATGAAGAAATCACCAGAACATTTGCACGGTTTTGGTGGGGTTCCTCGGAAAATAAAAGGAAGATGCATTGGTGTACCTGGAAGAAGATTTGCTTCCCTAAAAGTCTTGGCGGTCTAAATTTCAGAGATGTGGAAGGCTTTAATGCCAAACAAATTTGGAGGCTTTTAACAAATCCTAATTCTCTGGTTGCAAGGTTTCTCAAGAGCATATACCACAAGGATGGAGATATCTTGAAGGCTGAAATGGGGCGAAATCCTTCCCATCTTTGGAGGAGCTTACTGTGGGGTCGAGAATTAATCGTCCAAGGAGTGCGTTTCAGTGTAGGAAATGGCGAGCAAATCTCCTTTTTTAACAATCCCTGGATACCAAAGGAGTTCACGTTCAAGCCCACCTGCACAAATGGAAGTTATGCCCAATGGAAAGTAGCAAACTTCATTACTCTTTCAGGGAGTTAG

mRNA sequence

ATGATAACAAATTCAGAAACAAATCAAGTTAACTCGAAACCTCACGCGCATGCAAGTGCAAAGCCTCACCTAAAGCAACCCCTACAAGTCCAAGAAAGGCTTATAAACTCCTCCACCCATCTTCCCCCTACACTGGCACAAAGAGCTAATGAACAGGAGCTCATCCATCTAAAAGGCTTGCTGAACCTTTATGAAGCTGCCTCAGCTGCGGGCAAAGAAGTCTTAATCAAAAGTGTGGGGCAAGCAATACCATCATATTTGATGAGTATTTTCAAACTTCGAAAGCGTCTACATGAAGAAATCACCAGAACATTTGCACGGTTTTGGTGGGGTTCCTCGGAAAATAAAAGGAAGATGCATTGGTGTACCTGGAAGAAGATTTGCTTCCCTAAAAGTCTTGGCGGTCTAAATTTCAGAGATGTGGAAGGCTTTAATGCCAAACAAATTTGGAGGCTTTTAACAAATCCTAATTCTCTGGTTGCAAGGTTTCTCAAGAGCATATACCACAAGGATGGAGATATCTTGAAGGCTGAAATGGGGCGAAATCCTTCCCATCTTTGGAGGAGCTTACTGTGGGGTCGAGAATTAATCGTCCAAGGAGTGCGTTTCAGTGTAGGAAATGGCGAGCAAATCTCCTTTTTTAACAATCCCTGGATACCAAAGGAGTTCACGTTCAAGCCCACCTGCACAAATGGAAGTTATGCCCAATGGAAAGTAGCAAACTTCATTACTCTTTCAGGGAGTTAG

Coding sequence (CDS)

ATGATAACAAATTCAGAAACAAATCAAGTTAACTCGAAACCTCACGCGCATGCAAGTGCAAAGCCTCACCTAAAGCAACCCCTACAAGTCCAAGAAAGGCTTATAAACTCCTCCACCCATCTTCCCCCTACACTGGCACAAAGAGCTAATGAACAGGAGCTCATCCATCTAAAAGGCTTGCTGAACCTTTATGAAGCTGCCTCAGCTGCGGGCAAAGAAGTCTTAATCAAAAGTGTGGGGCAAGCAATACCATCATATTTGATGAGTATTTTCAAACTTCGAAAGCGTCTACATGAAGAAATCACCAGAACATTTGCACGGTTTTGGTGGGGTTCCTCGGAAAATAAAAGGAAGATGCATTGGTGTACCTGGAAGAAGATTTGCTTCCCTAAAAGTCTTGGCGGTCTAAATTTCAGAGATGTGGAAGGCTTTAATGCCAAACAAATTTGGAGGCTTTTAACAAATCCTAATTCTCTGGTTGCAAGGTTTCTCAAGAGCATATACCACAAGGATGGAGATATCTTGAAGGCTGAAATGGGGCGAAATCCTTCCCATCTTTGGAGGAGCTTACTGTGGGGTCGAGAATTAATCGTCCAAGGAGTGCGTTTCAGTGTAGGAAATGGCGAGCAAATCTCCTTTTTTAACAATCCCTGGATACCAAAGGAGTTCACGTTCAAGCCCACCTGCACAAATGGAAGTTATGCCCAATGGAAAGTAGCAAACTTCATTACTCTTTCAGGGAGTTAG

Protein sequence

MITNSETNQVNSKPHAHASAKPHLKQPLQVQERLINSSTHLPPTLAQRANEQELIHLKGLLNLYEAASAAGKEVLIKSVGQAIPSYLMSIFKLRKRLHEEITRTFARFWWGSSENKRKMHWCTWKKICFPKSLGGLNFRDVEGFNAKQIWRLLTNPNSLVARFLKSIYHKDGDILKAEMGRNPSHLWRSLLWGRELIVQGVRFSVGNGEQISFFNNPWIPKEFTFKPTCTNGSYAQWKVANFITLSGS
Homology
BLAST of Lag0031393 vs. NCBI nr
Match: XP_022131662.1 (uncharacterized protein LOC111004787 [Momordica charantia])

HSP 1 Score: 218.4 bits (555), Expect = 7.0e-53
Identity = 99/185 (53.51%), Postives = 136/185 (73.51%), Query Frame = 0

Query: 68  SAAGKEVLIKSVGQAIPSYLMSIFKLRKRLHEEITRTFARFWWGSSENKRKMHWCTWKKI 127
           S  GKEVLIKSVGQAIP+Y MS+F+L K   EE+++ FARFWWGSS + +K+HW +W+++
Sbjct: 10  SVGGKEVLIKSVGQAIPAYAMSVFRLPKGFCEEVSQMFARFWWGSSNDTKKLHWMSWERM 69

Query: 128 CFPKSLGGLNFRDVEGFN----AKQIWRLLTNPNSLVARFLKSIYHKDGDILKAEMGRNP 187
           C PK LGGLNFRD+EGFN    AKQ+WR+L NPN LV+R LK+ Y  D  +L+A   RN 
Sbjct: 70  CLPKELGGLNFRDLEGFNQALVAKQVWRVLQNPNILVSRVLKAKYFHDSLVLQATHLRNQ 129

Query: 188 SHLWRSLLWGRELIVQGVRFSVGNGEQISFFNNPWIPKEFTFKP-TCTNGSYAQWKVANF 247
           S+ W+  +WGR+L+++G+R  VGNG  I+ F++PWIP+ ++F+P T   G Y   KVA+ 
Sbjct: 130 SYFWKGFIWGRDLLIKGLRSRVGNGSTINIFSDPWIPRPYSFRPITAPFGPY-DVKVADL 189

BLAST of Lag0031393 vs. NCBI nr
Match: XP_015388533.1 (uncharacterized protein LOC107178177 [Citrus sinensis])

HSP 1 Score: 188.7 bits (478), Expect = 5.9e-44
Identity = 91/199 (45.73%), Postives = 130/199 (65.33%), Query Frame = 0

Query: 50  NEQELIHLKGLLN-LYEAASAAGKEVLIKSVGQAIPSYLMSIFKLRKRLHEEITRTFARF 109
           N+ +L  L  + N  ++  S+ GKE+LIK+V QA+P+Y MS+FK+   L  +I R  ARF
Sbjct: 11  NDMKLKVLSKISNWQHKLFSSGGKEILIKAVAQAVPAYAMSVFKIPLGLCNDIQRAMARF 70

Query: 110 WWGSSENKRKMHWCTWKKICFPKSLGGLNFRDVEGFN----AKQIWRLLTNPNSLVARFL 169
           WWGS E+K+ +HW  W+K+ + K  GGL FRDV  FN    AKQ WRLL N  SLVA+ +
Sbjct: 71  WWGSKEDKKGIHWGKWEKLSYAKIRGGLGFRDVSCFNQALLAKQGWRLLQNLESLVAKVI 130

Query: 170 KSIYHKDGDILKAEMGRNPSHLWRSLLWGRELIVQGVRFSVGNGEQISFFNNPWIPKEFT 229
           K+ Y+K+ D L A++G +PS +WRS+LWGR ++ +G R+ +GNGE+I    + WIP+  T
Sbjct: 131 KARYYKNTDFLNAKVGSSPSFIWRSILWGRHVLQKGTRWRIGNGEKIQIQASNWIPRPTT 190

Query: 230 FKPTCTNGSYAQWKVANFI 244
           FKP        + KV+  I
Sbjct: 191 FKPIVEPSLPTKAKVSELI 209

BLAST of Lag0031393 vs. NCBI nr
Match: XP_022155286.1 (uncharacterized protein LOC111022423 [Momordica charantia])

HSP 1 Score: 188.0 bits (476), Expect = 1.0e-43
Identity = 84/177 (47.46%), Postives = 118/177 (66.67%), Query Frame = 0

Query: 68  SAAGKEVLIKSVGQAIPSYLMSIFKLRKRLHEEITRTFARFWWGSSENKRKMHWCTWKKI 127
           S  GKEVLIK+V QAIP+Y +S FKL   +  E+ + + RFWWGSS   RK+HW +WK +
Sbjct: 450 SMGGKEVLIKTVAQAIPNYTLSCFKLPVSICNELHQIYNRFWWGSSSEDRKIHWQSWKLL 509

Query: 128 CFPKSLGGLNFRDVEGFN----AKQIWRLLTNPNSLVARFLKSIYHKDGDILKAEMGRNP 187
           C  K LGG+ FRD+  FN    AKQ WR+L +P+SL+A+ L+  Y K G  L+A++G  P
Sbjct: 510 CIRKDLGGMGFRDISIFNQAMLAKQSWRILRHPDSLLAKTLRGKYFKTGSFLQAKLGARP 569

Query: 188 SHLWRSLLWGRELIVQGVRFSVGNGEQISFFNNPWIPKEFTFKPTCTNGSYAQWKVA 241
           S+ WRS+LWGR+L  +G R+ VGNG  I+  ++PW+P++  F P  T+     + VA
Sbjct: 570 SYAWRSILWGRDLFKKGYRWKVGNGFSINLSSDPWLPRDGNFSPVFTHIHVRNFSVA 626

BLAST of Lag0031393 vs. NCBI nr
Match: XP_024178198.1 (uncharacterized protein LOC112184155 [Rosa chinensis])

HSP 1 Score: 185.3 bits (469), Expect = 6.5e-43
Identity = 88/181 (48.62%), Postives = 123/181 (67.96%), Query Frame = 0

Query: 68  SAAGKEVLIKSVGQAIPSYLMSIFKLRKRLHEEITRTFARFWWGSSENKRKMHWCTWKKI 127
           S AGKEVLIK+V Q+IP+Y+M+ F+L K L  E+ R  ARFWWG    +RK+HW  W+K+
Sbjct: 77  STAGKEVLIKAVVQSIPTYVMNCFELPKHLCHEMHRLMARFWWGEFGEERKIHWVAWEKL 136

Query: 128 CFPKSLGGLNFRDVEGFN----AKQIWRLLTNPNSLVARFLKSIYHKDGDILKAEMGRNP 187
           C  K  GGL FRD+  FN    AKQ WRL+  P+SL+A+ LK+ Y    D ++AE+ +  
Sbjct: 137 CASKKEGGLGFRDMHLFNIALLAKQGWRLICRPDSLLAQVLKARYFPQTDFMQAELHKGA 196

Query: 188 SHLWRSLLWGRELIVQGVRFSVGNGEQISFFNNPWIPKEFTFKP-TCTNGSYAQWKVANF 244
           S  WRS+L GR+L+ +G+RF VGNGE IS +N+PW+P  + F+P +       ++KVA+F
Sbjct: 197 SFTWRSILKGRDLLRKGLRFQVGNGENISVWNDPWVPLPYRFRPFSLPMQGTEEFKVADF 256

BLAST of Lag0031393 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 184.9 bits (468), Expect = 8.5e-43
Identity = 80/163 (49.08%), Postives = 112/163 (68.71%), Query Frame = 0

Query: 68  SAAGKEVLIKSVGQAIPSYLMSIFKLRKRLHEEITRTFARFWWGSSENKRKMHWCTWKKI 127
           S  GKEVLIK+V QAIP Y MS F+L KRL  E     ARFWWGSS+  +K+HW  W  +
Sbjct: 578 SIGGKEVLIKAVAQAIPCYTMSCFRLPKRLIREFHHITARFWWGSSKEDKKIHWVAWNSL 637

Query: 128 CFPKSLGGLNFRDVEGFN----AKQIWRLLTNPNSLVARFLKSIYHKDGDILKAEMGRNP 187
             PK  GG+ FRD+E FN    AKQ WR+L +PNS+++R LK  Y KD   ++A++  NP
Sbjct: 638 YLPKCEGGMGFRDLELFNKALLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEAKISGNP 697

Query: 188 SHLWRSLLWGRELIVQGVRFSVGNGEQISFFNNPWIPKEFTFK 227
           S++WRS+LWGR+L+ +G+R+ +GNG+ +  + + W+P + T K
Sbjct: 698 SYIWRSILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLK 740

BLAST of Lag0031393 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.8e-28
Identity = 59/151 (39.07%), Postives = 91/151 (60.26%), Query Frame = 0

Query: 82  AIPSYLMSIFKLRKRLHEEITRTFARFWWGSSENKRKMHWCTWKKICFPK-SLGGLNFRD 141
           A+P Y MS F+L K L +++T     FWW S ENKRK+ W  W+K+C  K   GGL FRD
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 142 VEGFN----AKQIWRLLTNPNSLVARFLKSIYHKDGDILKAEMGRNPSHLWRSLLWGREL 201
           +  FN    AKQ +R++  P++L++R L+S Y     +++  +G  PS+ WRS++ GREL
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121

Query: 202 IVQGVRFSVGNGEQISFFNNPWIPKEFTFKP 228
           + +G+  ++G+G     + + WI  E    P
Sbjct: 122 LSRGLLRTIGDGIHTKVWLDRWIMDETPLPP 152

BLAST of Lag0031393 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.2e-17
Identity = 54/160 (33.75%), Postives = 82/160 (51.25%), Query Frame = 0

Query: 68  SAAGKEVLIKSVGQAIPSYLMSIFKLRKRLHEEITRTFARFWWGSSENKRKMHWCTWKKI 127
           S AG+  L K+V  ++P + MS   L + +   + +    F WGS+  K+K H   W K+
Sbjct: 33  SFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLWGSTAEKKKQHLVKWSKV 92

Query: 128 CFPKSLGGLNFRDVEGFN----AKQIWRLLTNPNSLVARFLKSIYHKDGDILKAEM---G 187
           C PK  GGL  R  +  N    +K  WRLL   NSL    L+  YH  G+I  +      
Sbjct: 93  CSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQKKYHV-GEIRDSRWLIPK 152

Query: 188 RNPSHLWRSLLWG-RELIVQGVRFSVGNGEQISFFNNPWI 220
            + S  WRS+  G R+++  GV +  G+G+QI F+ + W+
Sbjct: 153 GSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWV 191

BLAST of Lag0031393 vs. ExPASy TrEMBL
Match: A0A6J1BRN0 (uncharacterized protein LOC111004787 OS=Momordica charantia OX=3673 GN=LOC111004787 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 3.4e-53
Identity = 99/185 (53.51%), Postives = 136/185 (73.51%), Query Frame = 0

Query: 68  SAAGKEVLIKSVGQAIPSYLMSIFKLRKRLHEEITRTFARFWWGSSENKRKMHWCTWKKI 127
           S  GKEVLIKSVGQAIP+Y MS+F+L K   EE+++ FARFWWGSS + +K+HW +W+++
Sbjct: 10  SVGGKEVLIKSVGQAIPAYAMSVFRLPKGFCEEVSQMFARFWWGSSNDTKKLHWMSWERM 69

Query: 128 CFPKSLGGLNFRDVEGFN----AKQIWRLLTNPNSLVARFLKSIYHKDGDILKAEMGRNP 187
           C PK LGGLNFRD+EGFN    AKQ+WR+L NPN LV+R LK+ Y  D  +L+A   RN 
Sbjct: 70  CLPKELGGLNFRDLEGFNQALVAKQVWRVLQNPNILVSRVLKAKYFHDSLVLQATHLRNQ 129

Query: 188 SHLWRSLLWGRELIVQGVRFSVGNGEQISFFNNPWIPKEFTFKP-TCTNGSYAQWKVANF 247
           S+ W+  +WGR+L+++G+R  VGNG  I+ F++PWIP+ ++F+P T   G Y   KVA+ 
Sbjct: 130 SYFWKGFIWGRDLLIKGLRSRVGNGSTINIFSDPWIPRPYSFRPITAPFGPY-DVKVADL 189

BLAST of Lag0031393 vs. ExPASy TrEMBL
Match: A0A6J1DRA0 (uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022423 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 4.9e-44
Identity = 84/177 (47.46%), Postives = 118/177 (66.67%), Query Frame = 0

Query: 68  SAAGKEVLIKSVGQAIPSYLMSIFKLRKRLHEEITRTFARFWWGSSENKRKMHWCTWKKI 127
           S  GKEVLIK+V QAIP+Y +S FKL   +  E+ + + RFWWGSS   RK+HW +WK +
Sbjct: 450 SMGGKEVLIKTVAQAIPNYTLSCFKLPVSICNELHQIYNRFWWGSSSEDRKIHWQSWKLL 509

Query: 128 CFPKSLGGLNFRDVEGFN----AKQIWRLLTNPNSLVARFLKSIYHKDGDILKAEMGRNP 187
           C  K LGG+ FRD+  FN    AKQ WR+L +P+SL+A+ L+  Y K G  L+A++G  P
Sbjct: 510 CIRKDLGGMGFRDISIFNQAMLAKQSWRILRHPDSLLAKTLRGKYFKTGSFLQAKLGARP 569

Query: 188 SHLWRSLLWGRELIVQGVRFSVGNGEQISFFNNPWIPKEFTFKPTCTNGSYAQWKVA 241
           S+ WRS+LWGR+L  +G R+ VGNG  I+  ++PW+P++  F P  T+     + VA
Sbjct: 570 SYAWRSILWGRDLFKKGYRWKVGNGFSINLSSDPWLPRDGNFSPVFTHIHVRNFSVA 626

BLAST of Lag0031393 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 4.1e-43
Identity = 80/163 (49.08%), Postives = 112/163 (68.71%), Query Frame = 0

Query: 68  SAAGKEVLIKSVGQAIPSYLMSIFKLRKRLHEEITRTFARFWWGSSENKRKMHWCTWKKI 127
           S  GKEVLIK+V QAIP Y MS F+L KRL  E     ARFWWGSS+  +K+HW  W  +
Sbjct: 578 SIGGKEVLIKAVAQAIPCYTMSCFRLPKRLIREFHHITARFWWGSSKEDKKIHWVAWNSL 637

Query: 128 CFPKSLGGLNFRDVEGFN----AKQIWRLLTNPNSLVARFLKSIYHKDGDILKAEMGRNP 187
             PK  GG+ FRD+E FN    AKQ WR+L +PNS+++R LK  Y KD   ++A++  NP
Sbjct: 638 YLPKCEGGMGFRDLELFNKALLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEAKISGNP 697

Query: 188 SHLWRSLLWGRELIVQGVRFSVGNGEQISFFNNPWIPKEFTFK 227
           S++WRS+LWGR+L+ +G+R+ +GNG+ +  + + W+P + T K
Sbjct: 698 SYIWRSILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLK 740

BLAST of Lag0031393 vs. ExPASy TrEMBL
Match: A0A1S8ACU2 (Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 5.4e-43
Identity = 76/164 (46.34%), Postives = 114/164 (69.51%), Query Frame = 0

Query: 68  SAAGKEVLIKSVGQAIPSYLMSIFKLRKRLHEEITRTFARFWWGSSENKRKMHWCTWKKI 127
           S+ GKE LIK+V QAIP+Y MS+F+L   L E+I R  A FWWG+ ++++  HW +W+K+
Sbjct: 30  SSGGKETLIKAVAQAIPAYAMSVFRLPTTLCEDIRRVIAGFWWGAKKDRKSTHWASWEKL 89

Query: 128 CFPKSLGGLNFRDVEGFN----AKQIWRLLTNPNSLVARFLKSIYHKDGDILKAEMGRNP 187
           C  K  GGL FRD+  FN    AKQ WR++  P SL+A+ L++ Y K  D L+A++G  P
Sbjct: 90  CQAKGRGGLGFRDITSFNQALVAKQSWRIIKYPESLMAKILQAKYFKGADFLQAKLGSKP 149

Query: 188 SHLWRSLLWGRELIVQGVRFSVGNGEQISFFNNPWIPKEFTFKP 228
           S +WRS++WGR++IV G+R+ +G G+++  + + WIP+   FKP
Sbjct: 150 SFVWRSIIWGRQVIVNGMRWRIGTGDRVKIYKSHWIPRPQAFKP 193

BLAST of Lag0031393 vs. ExPASy TrEMBL
Match: A0A6J1CV63 (uncharacterized protein LOC111014662 OS=Momordica charantia OX=3673 GN=LOC111014662 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 5.4e-43
Identity = 80/164 (48.78%), Postives = 116/164 (70.73%), Query Frame = 0

Query: 68  SAAGKEVLIKSVGQAIPSYLMSIFKLRKRLHEEITRTFARFWWGSSENKRKMHWCTWKKI 127
           S+ GKEVLIK+V QAIP+Y MS F+    L +EI   +ARFWWGS++ ++K+HW +WK++
Sbjct: 73  SSGGKEVLIKAVAQAIPNYSMSCFRFPMNLCKEINSLYARFWWGSNDREKKIHWPSWKRL 132

Query: 128 CFPKSLGGLNFRDVEGFN----AKQIWRLLTNPNSLVARFLKSIYHKDGDILKAEMGRNP 187
           C  K  GGL F+D+  FN    AKQ W+++ NPNSL+ R L+  Y K G+ + AE+G NP
Sbjct: 133 CVSKEQGGLGFKDLCIFNQAMLAKQSWQIIKNPNSLLVRVLRGKYFKHGNFMTAELGSNP 192

Query: 188 SHLWRSLLWGRELIVQGVRFSVGNGEQISFFNNPWIPKEFTFKP 228
           S +WRS+LWG+EL V+G+R+ +GNG  +   ++PWI +E +  P
Sbjct: 193 SFVWRSILWGKELFVKGIRWRIGNGFSVIIGSDPWILREGSSLP 236

BLAST of Lag0031393 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 127.1 bits (318), Expect = 2.0e-29
Identity = 59/151 (39.07%), Postives = 91/151 (60.26%), Query Frame = 0

Query: 82  AIPSYLMSIFKLRKRLHEEITRTFARFWWGSSENKRKMHWCTWKKICFPK-SLGGLNFRD 141
           A+P Y MS F+L K L +++T     FWW S ENKRK+ W  W+K+C  K   GGL FRD
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 142 VEGFN----AKQIWRLLTNPNSLVARFLKSIYHKDGDILKAEMGRNPSHLWRSLLWGREL 201
           +  FN    AKQ +R++  P++L++R L+S Y     +++  +G  PS+ WRS++ GREL
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGREL 121

Query: 202 IVQGVRFSVGNGEQISFFNNPWIPKEFTFKP 228
           + +G+  ++G+G     + + WI  E    P
Sbjct: 122 LSRGLLRTIGDGIHTKVWLDRWIMDETPLPP 152

BLAST of Lag0031393 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 5.7e-29
Identity = 55/142 (38.73%), Postives = 84/142 (59.15%), Query Frame = 0

Query: 82  AIPSYLMSIFKLRKRLHEEITRTFARFWWGSSENKRKMHWCTWKKICFPKSLGGLNFRDV 141
           A+P+Y M+ F L K + ++I    A FWW + +  + MHW  W  +   K+ GG+ F+D+
Sbjct: 2   ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61

Query: 142 EGFN----AKQIWRLLTNPNSLVARFLKSIYHKDGDILKAEMGRNPSHLWRSLLWGRELI 201
           E FN     KQ+WR+L+ P SL+A+  KS Y    D L A +G  PS +W+S+   +E++
Sbjct: 62  EAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEIL 121

Query: 202 VQGVRFSVGNGEQISFFNNPWI 220
            QG R  VGNGE I  + + W+
Sbjct: 122 RQGARAVVGNGEDIIIWRHKWL 143

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022131662.17.0e-5353.51uncharacterized protein LOC111004787 [Momordica charantia][more]
XP_015388533.15.9e-4445.73uncharacterized protein LOC107178177 [Citrus sinensis][more]
XP_022155286.11.0e-4347.46uncharacterized protein LOC111022423 [Momordica charantia][more]
XP_024178198.16.5e-4348.62uncharacterized protein LOC112184155 [Rosa chinensis][more]
XP_022150918.18.5e-4349.08uncharacterized protein LOC111018954 [Momordica charantia][more]
Match NameE-valueIdentityDescription
P932952.8e-2839.07Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
P0C2F62.2e-1733.75Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Match NameE-valueIdentityDescription
A0A6J1BRN03.4e-5353.51uncharacterized protein LOC111004787 OS=Momordica charantia OX=3673 GN=LOC111004... [more]
A0A6J1DRA04.9e-4447.46uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DAR44.1e-4349.08uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A1S8ACU25.4e-4346.34Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1[more]
A0A6J1CV635.4e-4348.78uncharacterized protein LOC111014662 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
Match NameE-valueIdentityDescription
ATMG00310.12.0e-2939.07RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT4G29090.15.7e-2938.73Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availablePANTHERPTHR33116:SF45SUBFAMILY NOT NAMEDcoord: 65..233
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 65..233

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0031393.1Lag0031393.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016740 transferase activity