Lag0031393 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAACAAATTCAGAAACAAATCAAGTTAACTCGAAACCTCACGCGCATGCAAGTGCAAAGCCTCACCTAAAGCAACCCCTACAAGTCCAAGAAAGGCTTATAAACTCCTCCACCCATCTTCCCCCTACACTGGCACAAAGGTCTCGCAAAGAAGCTAAAAGGCGCAAAAAGGGGTGTTCTCAAAACCTAGGGCCTGCAAGAGAAACAACTCATTTACTACTTTTACCACTCTAAAGATGGGGTACTAGCTTTCACGCTACAATATAGGGACCCATAACCCGGGTTTTACCCTTGGTTGGCCTAACTGAACACACTGCAGGCAGCTCTTACCCCTCTTTGGCTGGCGCTTTCAACATGCTTTTATTGAGGAGACAGGAACATGTTTTAAGAGTCTCTATGCATGCCCACGCCTCGTTTCTTTTCTTTCCCTATGACCTCTTTGTTGATGGTACATACTTTATCTCAATTAAATTATAATCTACCTAGCTTACTTTGGTTCGAGACACATTAAACATTTTATAACATTATAAAAAGAACACAATAATTAACTTACATAGGTAAGTGCAGAAGGATTATTTACCTTTGAAGCAAAGGTCATGGGATTTTTGTATTTCATTTGCTGTTTTATTTGGTGAATTGTGTCCTCATAAATCTCTTGGTTAATGCAATGTGTACAACCACATTCTTTCTCACAATAAAGTCCAGCTGAAAGGCATTCACAATATCTGCATAAATAAATAATAAGTTAAATGTAATATAAATATAATGATTAATTAGAATTTTTAATGTGAATATTTAGATAAAATTATAGAATAATATCTAGACTCAAATTTTTGTATTAAATCATTTTATCATATGTTACTTACAGTTGTACGCACTCTGATTTCTAGCCGTTGTAACGTTTGCTTGCTTTATTTTCACTCTCCAGTTTTGATTCCTTGCTATATTGCAACACAACCAACATTCAAAGAAAATTTGTTTCAAGAAAAAAAAAACATTCAAAGATAATTCAAATACTTAAAAAAAAAAAAAAAAAAAACTCTTTTTACTTCTAAAACTTATCCATTTGATTTCATTTAATTTAATTGAACTCTAATTTCAACAAATATCAAGTTTTGCATAAGATTAAGTATAAGATTCTATTTGTGGACGACAGTCTAGTATTTTGCAGAGCTAATGAACAGGAGCTCATCCATCTAAAAGGCTTGCTGAACCTTTATGAAGCTGCCTCAGGTGAGAGTATCAATTTCTCGAAGTCTGCCATTCTTTTTCCTAAAGGCACCAACCAAGATAGAGGGAACTACCTTAGTAGCTTACTGGGAGTTAATTGCGTGGAAGACCTTGGCAACTATTTGGGCATTCCTTCTGTCCTTACAAGAAACAAGACAAAAGACTTCAGTTTTATCATTGACAAGCTGTGGAAGACCTTAAGTGGTTGGAAACAATTTTTTTTTCTCAGCTGCGGGCAAAGAAGTCTTAATCAAAAGTGTGGGGCAAGCAATACCATCATATTTGATGAGTATTTTCAAACTTCGAAAGCGTCTACATGAAGAAATCACCAGAACATTTGCACGGTTTTGGTGGGGTTCCTCGGAAAATAAAAGGAAGATGCATTGGTGTACCTGGAAGAAGATTTGCTTCCCTAAAAGTCTTGGCGGTCTAAATTTCAGAGATGTGGAAGGCTTTAATGCCAAACAAATTTGGAGGCTTTTAACAAATCCTAATTCTCTGGTTGCAAGGTTTCTCAAGAGCATATACCACAAGGATGGAGATATCTTGAAGGCTGAAATGGGGCGAAATCCTTCCCATCTTTGGAGGAGCTTACTGTGGGGTCGAGAATTAATCGTCCAAGGAGTGCGTTTCAGTGTAGGAAATGGCGAGCAAATCTCCTTTTTTAACAATCCCTGGATACCAAAGGAGTTCACGTTCAAGCCCACCTGCACAAATGGAAGTTATGCCCAATGGAAAGTAGCAAACTTCATTACTCTTTCAGGGAGTTAG ATGATAACAAATTCAGAAACAAATCAAGTTAACTCGAAACCTCACGCGCATGCAAGTGCAAAGCCTCACCTAAAGCAACCCCTACAAGTCCAAGAAAGGCTTATAAACTCCTCCACCCATCTTCCCCCTACACTGGCACAAAGAGCTAATGAACAGGAGCTCATCCATCTAAAAGGCTTGCTGAACCTTTATGAAGCTGCCTCAGCTGCGGGCAAAGAAGTCTTAATCAAAAGTGTGGGGCAAGCAATACCATCATATTTGATGAGTATTTTCAAACTTCGAAAGCGTCTACATGAAGAAATCACCAGAACATTTGCACGGTTTTGGTGGGGTTCCTCGGAAAATAAAAGGAAGATGCATTGGTGTACCTGGAAGAAGATTTGCTTCCCTAAAAGTCTTGGCGGTCTAAATTTCAGAGATGTGGAAGGCTTTAATGCCAAACAAATTTGGAGGCTTTTAACAAATCCTAATTCTCTGGTTGCAAGGTTTCTCAAGAGCATATACCACAAGGATGGAGATATCTTGAAGGCTGAAATGGGGCGAAATCCTTCCCATCTTTGGAGGAGCTTACTGTGGGGTCGAGAATTAATCGTCCAAGGAGTGCGTTTCAGTGTAGGAAATGGCGAGCAAATCTCCTTTTTTAACAATCCCTGGATACCAAAGGAGTTCACGTTCAAGCCCACCTGCACAAATGGAAGTTATGCCCAATGGAAAGTAGCAAACTTCATTACTCTTTCAGGGAGTTAG ATGATAACAAATTCAGAAACAAATCAAGTTAACTCGAAACCTCACGCGCATGCAAGTGCAAAGCCTCACCTAAAGCAACCCCTACAAGTCCAAGAAAGGCTTATAAACTCCTCCACCCATCTTCCCCCTACACTGGCACAAAGAGCTAATGAACAGGAGCTCATCCATCTAAAAGGCTTGCTGAACCTTTATGAAGCTGCCTCAGCTGCGGGCAAAGAAGTCTTAATCAAAAGTGTGGGGCAAGCAATACCATCATATTTGATGAGTATTTTCAAACTTCGAAAGCGTCTACATGAAGAAATCACCAGAACATTTGCACGGTTTTGGTGGGGTTCCTCGGAAAATAAAAGGAAGATGCATTGGTGTACCTGGAAGAAGATTTGCTTCCCTAAAAGTCTTGGCGGTCTAAATTTCAGAGATGTGGAAGGCTTTAATGCCAAACAAATTTGGAGGCTTTTAACAAATCCTAATTCTCTGGTTGCAAGGTTTCTCAAGAGCATATACCACAAGGATGGAGATATCTTGAAGGCTGAAATGGGGCGAAATCCTTCCCATCTTTGGAGGAGCTTACTGTGGGGTCGAGAATTAATCGTCCAAGGAGTGCGTTTCAGTGTAGGAAATGGCGAGCAAATCTCCTTTTTTAACAATCCCTGGATACCAAAGGAGTTCACGTTCAAGCCCACCTGCACAAATGGAAGTTATGCCCAATGGAAAGTAGCAAACTTCATTACTCTTTCAGGGAGTTAG MITNSETNQVNSKPHAHASAKPHLKQPLQVQERLINSSTHLPPTLAQRANEQELIHLKGLLNLYEAASAAGKEVLIKSVGQAIPSYLMSIFKLRKRLHEEITRTFARFWWGSSENKRKMHWCTWKKICFPKSLGGLNFRDVEGFNAKQIWRLLTNPNSLVARFLKSIYHKDGDILKAEMGRNPSHLWRSLLWGRELIVQGVRFSVGNGEQISFFNNPWIPKEFTFKPTCTNGSYAQWKVANFITLSGS Homology
BLAST of Lag0031393 vs. NCBI nr
Match: XP_022131662.1 (uncharacterized protein LOC111004787 [Momordica charantia]) HSP 1 Score: 218.4 bits (555), Expect = 7.0e-53 Identity = 99/185 (53.51%), Postives = 136/185 (73.51%), Query Frame = 0
BLAST of Lag0031393 vs. NCBI nr
Match: XP_015388533.1 (uncharacterized protein LOC107178177 [Citrus sinensis]) HSP 1 Score: 188.7 bits (478), Expect = 5.9e-44 Identity = 91/199 (45.73%), Postives = 130/199 (65.33%), Query Frame = 0
BLAST of Lag0031393 vs. NCBI nr
Match: XP_022155286.1 (uncharacterized protein LOC111022423 [Momordica charantia]) HSP 1 Score: 188.0 bits (476), Expect = 1.0e-43 Identity = 84/177 (47.46%), Postives = 118/177 (66.67%), Query Frame = 0
BLAST of Lag0031393 vs. NCBI nr
Match: XP_024178198.1 (uncharacterized protein LOC112184155 [Rosa chinensis]) HSP 1 Score: 185.3 bits (469), Expect = 6.5e-43 Identity = 88/181 (48.62%), Postives = 123/181 (67.96%), Query Frame = 0
BLAST of Lag0031393 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia]) HSP 1 Score: 184.9 bits (468), Expect = 8.5e-43 Identity = 80/163 (49.08%), Postives = 112/163 (68.71%), Query Frame = 0
BLAST of Lag0031393 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 2.8e-28 Identity = 59/151 (39.07%), Postives = 91/151 (60.26%), Query Frame = 0
BLAST of Lag0031393 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.2e-17 Identity = 54/160 (33.75%), Postives = 82/160 (51.25%), Query Frame = 0
BLAST of Lag0031393 vs. ExPASy TrEMBL
Match: A0A6J1BRN0 (uncharacterized protein LOC111004787 OS=Momordica charantia OX=3673 GN=LOC111004787 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 3.4e-53 Identity = 99/185 (53.51%), Postives = 136/185 (73.51%), Query Frame = 0
BLAST of Lag0031393 vs. ExPASy TrEMBL
Match: A0A6J1DRA0 (uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022423 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 4.9e-44 Identity = 84/177 (47.46%), Postives = 118/177 (66.67%), Query Frame = 0
BLAST of Lag0031393 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 4.1e-43 Identity = 80/163 (49.08%), Postives = 112/163 (68.71%), Query Frame = 0
BLAST of Lag0031393 vs. ExPASy TrEMBL
Match: A0A1S8ACU2 (Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 5.4e-43 Identity = 76/164 (46.34%), Postives = 114/164 (69.51%), Query Frame = 0
BLAST of Lag0031393 vs. ExPASy TrEMBL
Match: A0A6J1CV63 (uncharacterized protein LOC111014662 OS=Momordica charantia OX=3673 GN=LOC111014662 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 5.4e-43 Identity = 80/164 (48.78%), Postives = 116/164 (70.73%), Query Frame = 0
BLAST of Lag0031393 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 127.1 bits (318), Expect = 2.0e-29 Identity = 59/151 (39.07%), Postives = 91/151 (60.26%), Query Frame = 0
BLAST of Lag0031393 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 125.6 bits (314), Expect = 5.7e-29 Identity = 55/142 (38.73%), Postives = 84/142 (59.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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