Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAACTGAGACAAGAACTATGGAAGAAAGAATGACTCAGATGCAAAAGCACATCAACAACTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATCGCGCAACTAAAGTGCCAAATTGAGAACCAACATATCTCCGAATCAAGTCAAACACAAGTCATAAAAAATCATGACAAAGGAAAGACTATAGTGCAAGATGATCAGCCACAGTGTTCTGCTTCGGTTGCTTCACTATCCATCCAACAGCTCCAAGATATGATCACAAACTGTATCAGAGCTCAGTATGGTGGACCTACTCGAGATTCCCTCTTGTATTCCAAACCTTATACTAAGAGGATTGATAACTTGAGAACGCCAATCAGGTATCAACCACCAAAATTTCAACAGTTTGATGGAAAGAGCAATCATAAACAACATATTGCCCACTTCGTTGAGACATGCGAGAACGCTGGTACTCGAGGGGACCTACTAGTCAAGCAGTTCGTTCGAACACTTAAAGGAAATGCTTTTGACTGGTACACTGATCTAGAACCTGAGTCAGTACACAGTTGGGAGGAACTCGAAAGAGAGTTTTTGAATCGCTTCTACAGCACTAGAAGAACCGTTAGCATGTTCGAGCTCACCAACACTAAACAACAAAAAGGTGAACTCGTAGTTAACTATATAAATCGCTGGAGAGCCATGAGTCTAGATTGCAAAGATCGTCTCACTGAACTCTCTTCCGTCGAGATGTGCATTCAAGGCATGCACTGGGAACTCCTCTACATCCTTAAAGGTATAAAGCCTCGCACCTTCGAAGAACTAGCAACTCGCGCCCACGATATGGAGCTAAGTATTGCTAGTCGAGAAAACCAAGACCTTCTCCTCCCTAACATGAGAAAAGAAGGAAGGAACGACGAAGAGACTATAGAAAAATCTATGGTTGTAAACACAACTCTTCCTAAGTCGTCTTCAAAAGAAAAGCGACAAACAAATGGAACGCATCACTTAACTTTAAAGGAAAGACAGAAGAAAATCTATCCTTTCCCTGATGCCGACATCCCTGATATGTTGGAACAAGTACTAGAAGCGCACCTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCGATGATCCCAAGTATTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAAGATGTTTCGTCCTTAAGGACTTAATTTTAAAGCTGGCTAAGGAAGGCAAAATTGAGCTCGACCTTGATGAAGTAGCTCAATCAAATCTTGCTATAGTCAAAGGAAAGAGCAAACATCAAAGAAAGAAGGATCTTAAGAAACTTCAACCCAAGAGGAAGAGAAGTAAAAAGTTTTCTCAACCTCAACAACAGGTGATGCTGAATAAATCATTCTCCAAAACTTTTCACAAAAAGGAAAAAGTGAACTTTGCAACTTTCTACTGCATCGACGTAGAAGAAGTTAACAATTCCAAGAAGAGTGAACAAAGGACTTCTGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGCATTCCAAAGAATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTTCATTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGACCTTCAACATCTGTTTTTTATCGCCTCAAAGTAACAAGCGGTTAACCTAAAAGAAAGATGGCTAACTTGGAGGTGGAACTTTTTGATGAAGTAAACAACGACAAGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGAGAAAGTTCTATGTTCTCATAAATACAGATGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAATCCTACAAGTCAAGGATCTGATCAAGACCATGATGAAGATAAGGGCTTTTAAAATGTAAAAGCTCCTTGTCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTGAGTGCAAAAAAAAATCTTGAACTACGTTATGACTTGATCCCTATTCCATAAGGGTACGTAGGTAGCTTAAAGAAAACTTTAAGTTCAGTCTCTATAAACAAAAAAAGGTTCTTCGCTGCAGTTCCTTGTCTCCAAGTTCGAGGGTCCTTACACTGTACGCTATTGTGTTGTTCCTTCTCCAAGTTCGAAGGTTCTCCGTTGTATCCTGTTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACGACTGCTACGTTGTTCCTCCTCCAAGTGCGAAGGATCTTATGTGGTGCGCTGTTGCATTGTTCCCTTTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTCGCTGGAGTTCATTCTCCCCAAGTTCGAAGGTTCTCACGCGCTTCATTGCAATTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTAGCAATTCTTTCTCCCCAAGTTCGAAGGTTCACTCACTTCGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGTTGAAGTTCCTTCCTCCAAGTTTGAAGGTCCTCATGCTACGCTCGGCTGCACTGCTGCGCTACTTCCTAAAGTCCAAAGATGTCAATTGTCCTCACGTTGCGCTGCTTCCTTCTCCAAGTTCGAAGGTCCTCATGCTACGCTCGGCTACACTGTTGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCTTGTACTTATGCTGAAAGGCGTGGCAGCGACACAAGTCCAAGGACACGCCCCAAAATAAGGAACATGTCCCTACACTCATGTTGAAAGGGCGTGACGGCGACACAAGTCTAAGGAACATGTCCCATAGCGAGGAACATGTCCCTATAATCGTGCTGAAAGGGCGTGACGGCGACACAAGTCCAAGGAACATGTCCCATAGCGAGGAACATGTCCCTGTACTCGTGCTGAAAGGGCGTGACGGCGACACAAGTCCAAGGAACATGTCCCAAAGCGAGGAACATGTCCCTGCACTCGTGCTGAAAGGGCGTGACGACGACACAAGTCCAAGGAACATGTCCCAAAGCGAGGAACATGTCCCTGTACTCGTGCTGAAAGGGTGTGACGGCGACACAAGTCCAAGGAACATGTCCCTGCACTTGTGCCAAAAGGCATGGCGACAACACAAGTCCAAGGAACATGTCCCAAAGCCAGGAACATGTCCCTACACTCGTGCTGAAAGGGCGTAG
mRNA sequence
ATGATAACTGAGACAAGAACTATGGAAGAAAGAATGACTCAGATGCAAAAGCACATCAACAACTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATCGCGCAACTAAAGTGCCAAATTGAGAACCAACATATCTCCGAATCAAGTCAAACACAAGTCATAAAAAATCATGACAAAGGAAAGACTATAGTGCAAGATGATCAGCCACAGTGTTCTGCTTCGGTTGCTTCACTATCCATCCAACAGCTCCAAGATATGATCACAAACTGTATCAGAGCTCAGTATGGTGGACCTACTCGAGATTCCCTCTTGTATTCCAAACCTTATACTAAGAGGATTGATAACTTGAGAACGCCAATCAGGTATCAACCACCAAAATTTCAACAGTTTGATGGAAAGAGCAATCATAAACAACATATTGCCCACTTCGTTGAGACATGCGAGAACGCTGGTACTCGAGGGGACCTACTAGTCAAGCAGTTCGTTCGAACACTTAAAGGAAATGCTTTTGACTGGTACACTGATCTAGAACCTGAGTCAGTACACAGTTGGGAGGAACTCGAAAGAGAGTTTTTGAATCGCTTCTACAGCACTAGAAGAACCGTTAGCATGTTCGAGCTCACCAACACTAAACAACAAAAAGGTGAACTCGTAGTTAACTATATAAATCGCTGGAGAGCCATGAGTCTAGATTGCAAAGATCGTCTCACTGAACTCTCTTCCGTCGAGATGTGCATTCAAGGCATGCACTGGGAACTCCTCTACATCCTTAAAGGTATAAAGCCTCGCACCTTCGAAGAACTAGCAACTCGCGCCCACGATATGGAGCTAAGTATTGCTAGTCGAGAAAACCAAGACCTTCTCCTCCCTAACATGAGAAAAGAAGGAAGGAACGACGAAGAGACTATAGAAAAATCTATGGTTGTAAACACAACTCTTCCTAAGTCGTCTTCAAAAGAAAAGCGACAAACAAATGGAACGCATCACTTAACTTTAAAGGAAAGACAGAAGAAAATCTATCCTTTCCCTGATGCCGACATCCCTGATATGTTGGAACAAGTACTAGAAGCGCACCTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCGATGATCCCAAGTATTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAAGATGTTTCGTCCTTAAGGACTTAATTTTAAAGCTGGCTAAGGAAGGCAAAATTGAGCTCGACCTTGATGAAGTAGCTCAATCAAATCTTGCTATAGTCAAAGGAAAGAGCAAACATCAAAGAAAGAAGGATCTTAAGAAACTTCAACCCAAGAGGAAGAGAAGTAAAAAGTTTTCTCAACCTCAACAACAGGTGATGCTGAATAAATCATTCTCCAAAACTTTTCACAAAAAGGAAAAAGTGAACTTTGCAACTTTCTACTGCATCGACGTAGAAGAAGTTAACAATTCCAAGAAGAGTGAACAAAGGACTTCTGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGCATTCCAAAGAATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTTCATTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGACCTTCAACATCTGTTTTTTATCGCCTCAAATTCCTTGTCTCCAAGTTCGAGGGTCCTTACACTGTACGCTATTGTGTTGTTCCTTCTCCAAGTTCGAAGGTTCTCCGTTGTATCCTGTTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACGACTGCTACGTTGTTCCTCCTCCAAGTGCGAAGGATCTTATGTGGTGCGCTGTTGCATTGTTCCCTTTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTCGCTGGAGTTCATTCTCCCCAAGTTCGAAGGTTCTCACGCGCTTCATTGCAATTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTTCGTTGAAGTTCCTTCCTCCAAGTTTGAAGGTCCTCATGCTACGCTCGGCTGCACTGCTGCGCTACTTCCTAAAGTCCAAAGATGTCAATTGTCCTCACGTTGCGCTGCTTCCTTCTCCAAGTTCGAAGGCGTGGCAGCGACACAAGTCCAAGGACACGCCCCAAAATAAGGAACATGTCCCTACACTCATGTTGAAAGGGCGTGACGGCGACACAAGTCTAAGGAACATGTCCCATAGCGAGGAACATGTCCCTATAATCGTGCTGAAAGGGCGTGACGGCGACACAAGTCCAAGGAACATGTCCCATAGCGAGGAACATGTCCCTGTACTCGTGCTGAAAGGGCGTGACGGCGACACAAGTCCAAGGAACATGTCCCAAAGCGAGGAACATGTCCCTGCACTCGTGCTGAAAGGGCGTGACGACGACACAAGTCCAAGGAACATGTCCCAAAGCGAGGAACATGTCCCTGTACTCGTGCTGAAAGGGTGTGACGGCGACACAAGTCCAAGGAACATGTCCCTGCACTTGTGCCAAAAGGCATGGCGACAACACAAGTCCAAGGAACATGTCCCAAAGCCAGGAACATGTCCCTACACTCGTGCTGAAAGGGCGTAG
Coding sequence (CDS)
ATGATAACTGAGACAAGAACTATGGAAGAAAGAATGACTCAGATGCAAAAGCACATCAACAACTTGATGAAGGCGATTGAAGAAAAAGATTCTCAAATCGCGCAACTAAAGTGCCAAATTGAGAACCAACATATCTCCGAATCAAGTCAAACACAAGTCATAAAAAATCATGACAAAGGAAAGACTATAGTGCAAGATGATCAGCCACAGTGTTCTGCTTCGGTTGCTTCACTATCCATCCAACAGCTCCAAGATATGATCACAAACTGTATCAGAGCTCAGTATGGTGGACCTACTCGAGATTCCCTCTTGTATTCCAAACCTTATACTAAGAGGATTGATAACTTGAGAACGCCAATCAGGTATCAACCACCAAAATTTCAACAGTTTGATGGAAAGAGCAATCATAAACAACATATTGCCCACTTCGTTGAGACATGCGAGAACGCTGGTACTCGAGGGGACCTACTAGTCAAGCAGTTCGTTCGAACACTTAAAGGAAATGCTTTTGACTGGTACACTGATCTAGAACCTGAGTCAGTACACAGTTGGGAGGAACTCGAAAGAGAGTTTTTGAATCGCTTCTACAGCACTAGAAGAACCGTTAGCATGTTCGAGCTCACCAACACTAAACAACAAAAAGGTGAACTCGTAGTTAACTATATAAATCGCTGGAGAGCCATGAGTCTAGATTGCAAAGATCGTCTCACTGAACTCTCTTCCGTCGAGATGTGCATTCAAGGCATGCACTGGGAACTCCTCTACATCCTTAAAGGTATAAAGCCTCGCACCTTCGAAGAACTAGCAACTCGCGCCCACGATATGGAGCTAAGTATTGCTAGTCGAGAAAACCAAGACCTTCTCCTCCCTAACATGAGAAAAGAAGGAAGGAACGACGAAGAGACTATAGAAAAATCTATGGTTGTAAACACAACTCTTCCTAAGTCGTCTTCAAAAGAAAAGCGACAAACAAATGGAACGCATCACTTAACTTTAAAGGAAAGACAGAAGAAAATCTATCCTTTCCCTGATGCCGACATCCCTGATATGTTGGAACAAGTACTAGAAGCGCACCTGATAGAGCTTCCTAAGTGTAAACGACCAGAAGAGATGGAGAAAGTCGATGATCCCAAGTATTGCAAGTATCATCGAGTTATTGGTCATCCAGTGGAAAGATGTTTCGTCCTTAAGGACTTAATTTTAAAGCTGGCTAAGGAAGGCAAAATTGAGCTCGACCTTGATGAAGTAGCTCAATCAAATCTTGCTATAGTCAAAGGAAAGAGCAAACATCAAAGAAAGAAGGATCTTAAGAAACTTCAACCCAAGAGGAAGAGAAGTAAAAAGTTTTCTCAACCTCAACAACAGGTGATGCTGAATAAATCATTCTCCAAAACTTTTCACAAAAAGGAAAAAGTGAACTTTGCAACTTTCTACTGCATCGACGTAGAAGAAGTTAACAATTCCAAGAAGAGTGAACAAAGGACTTCTGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGCATTCCAAAGAATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTTCATTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGACCTTCAACATCTGTTTTTTATCGCCTCAAATTCCTTGTCTCCAAGTTCGAGGGTCCTTACACTGTACGCTATTGTGTTGTTCCTTCTCCAAGTTCGAAGGTTCTCCGTTGTATCCTGTTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACGACTGCTACGTTGTTCCTCCTCCAAGTGCGAAGGATCTTATGTGGTGCGCTGTTGCATTGTTCCCTTTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTCGCTGGAGTTCATTCTCCCCAAGTTCGAAGGTTCTCACGCGCTTCATTGCAATTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTTCGTTGAAGTTCCTTCCTCCAAGTTTGAAGGTCCTCATGCTACGCTCGGCTGCACTGCTGCGCTACTTCCTAAAGTCCAAAGATGTCAATTGTCCTCACGTTGCGCTGCTTCCTTCTCCAAGTTCGAAGGCGTGGCAGCGACACAAGTCCAAGGACACGCCCCAAAATAAGGAACATGTCCCTACACTCATGTTGAAAGGGCGTGACGGCGACACAAGTCTAAGGAACATGTCCCATAGCGAGGAACATGTCCCTATAATCGTGCTGAAAGGGCGTGACGGCGACACAAGTCCAAGGAACATGTCCCATAGCGAGGAACATGTCCCTGTACTCGTGCTGAAAGGGCGTGACGGCGACACAAGTCCAAGGAACATGTCCCAAAGCGAGGAACATGTCCCTGCACTCGTGCTGAAAGGGCGTGACGACGACACAAGTCCAAGGAACATGTCCCAAAGCGAGGAACATGTCCCTGTACTCGTGCTGAAAGGGTGTGACGGCGACACAAGTCCAAGGAACATGTCCCTGCACTTGTGCCAAAAGGCATGGCGACAACACAAGTCCAAGGAACATGTCCCAAAGCCAGGAACATGTCCCTACACTCGTGCTGAAAGGGCGTAG
Protein sequence
MITETRTMEERMTQMQKHINNLMKAIEEKDSQIAQLKCQIENQHISESSQTQVIKNHDKGKTIVQDDQPQCSASVASLSIQQLQDMITNCIRAQYGGPTRDSLLYSKPYTKRIDNLRTPIRYQPPKFQQFDGKSNHKQHIAHFVETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESVHSWEELEREFLNRFYSTRRTVSMFELTNTKQQKGELVVNYINRWRAMSLDCKDRLTELSSVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDEETIEKSMVVNTTLPKSSSKEKRQTNGTHHLTLKERQKKIYPFPDADIPDMLEQVLEAHLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLAIVKGKSKHQRKKDLKKLQPKRKRSKKFSQPQQQVMLNKSFSKTFHKKEKVNFATFYCIDVEEVNNSKKSEQRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTFIRPSAFQRLSVSTSKKSRPSTSVFYRLKFLVSKFEGPYTVRYCVVPSPSSKVLRCILLRCSFSKFEGSQLYDCYVVPPPSAKDLMWCAVALFPFLSSSMVLTQLRWSSFSPSSKVLTRFIAIPSLQGRRFSRASLKFLPPSLKVLMLRSAALLRYFLKSKDVNCPHVALLPSPSSKAWQRHKSKDTPQNKEHVPTLMLKGRDGDTSLRNMSHSEEHVPIIVLKGRDGDTSPRNMSHSEEHVPVLVLKGRDGDTSPRNMSQSEEHVPALVLKGRDDDTSPRNMSQSEEHVPVLVLKGCDGDTSPRNMSLHLCQKAWRQHKSKEHVPKPGTCPYTRAERA
Homology
BLAST of Lag0031384 vs. NCBI nr
Match:
KAA0056121.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 636.0 bits (1639), Expect = 4.9e-178
Identity = 349/582 (59.97%), Postives = 428/582 (73.54%), Query Frame = 0
Query: 1 MITETRTMEERMTQMQKHINNLMKAIEEKDSQIAQLKCQIENQHISESSQTQVIKNHDKG 60
M+T T E RM +++K +N LMK +EE+D +IA LK IE++ +ESS +KN DKG
Sbjct: 85 MVTNVDTSENRMAELEKKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKG 144
Query: 61 KTIVQDDQPQCSASVASLSIQQLQDMITNCIRAQYGGPTRDSLLYSKPYTKRIDNLRTPI 120
K ++Q+ QPQ S S+ASLS+QQLQ+MI + I+ QYGGP + LY KPYTKRIDNLR P
Sbjct: 145 KAVMQESQPQNSTSIASLSVQQLQEMIASSIKMQYGGPAQTFSLYFKPYTKRIDNLRMPN 204
Query: 121 RYQPPKFQQFDGKSNHKQHIAHFVETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLEPES 180
YQPPKFQQFDGK N KQH+AHF++TCE AGTRGDLLVKQFVRTLKGNA DWY DLEPES
Sbjct: 205 GYQPPKFQQFDGKGNPKQHVAHFIKTCETAGTRGDLLVKQFVRTLKGNACDWYIDLEPES 264
Query: 181 VHSWEELEREFLNRFYSTRRTVSMFELTNTKQQKGELVVNYINRWRAMSLDCKDRLTELS 240
+ +WE+LER+FLNRFYSTR VSM ELTNT+QQKGELV++YINRWRA+SLDCKDRLTELS
Sbjct: 265 IDNWEQLERDFLNRFYSTRHIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELS 324
Query: 241 SVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDE 300
+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIA+R +D L+P R + +
Sbjct: 325 AVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELD 384
Query: 301 ET-------IEKSMVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQKKIYPFPDAD 360
+T I++SMVV+ T KS SK K R+ +G TLKERQ+K+YPFPD+D
Sbjct: 385 DTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSD 444
Query: 361 IPDMLEQVLEAHLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKE 420
+ DMLEQ+LE LI+LP+CKRPE+ KVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E
Sbjct: 445 VADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLARE 504
Query: 421 GKIELDLDEVAQSNLAI------VKGKSKH----QRKKDLKKLQPKRKRSKKFSQPQQQV 480
KIELD+DEVAQ+N AI +KGK + +R L + P RS P++ +
Sbjct: 505 KKIELDIDEVAQTNHAIEMTSNPIKGKDEDFLQLRRSITLAEFLP---RSFLEDDPEEIL 564
Query: 481 MLNKSFSKTFHKKEKVNFATFYCIDVEEVNNSKKSEQRTSVFDRIKPPTTRPSAFQRMSM 540
+ + + + + N+ + +EVNNS + QRTSVFDRIKP TTR S FQR+S+
Sbjct: 565 EVTACHAASIVEVDN-NYGS-----SKEVNNSNEINQRTSVFDRIKPSTTRSSVFQRLSV 624
Query: 541 AATEEENQCSMSTFIRPSAFQRLSVSTSKKSRPSTSVFYRLK 559
A EEENQC + R S +RLS+ST KK RPSTS F RLK
Sbjct: 625 ATKEEENQCPTFIYTRTSTSKRLSISTLKKDRPSTSSFDRLK 657
BLAST of Lag0031384 vs. NCBI nr
Match:
TYK03695.1 (retrotransposon gag protein [Cucumis melo var. makuwa])
HSP 1 Score: 620.9 bits (1600), Expect = 1.6e-173
Identity = 354/665 (53.23%), Postives = 435/665 (65.41%), Query Frame = 0
Query: 1 MITETRTMEERMTQMQKHINNLMKAIEEKDSQIAQLKCQIENQHISESSQTQVIKNHDKG 60
M+T T E RM +++K +N LMK +EE+D +IA LK IE++ +ESS +KN DKG
Sbjct: 85 MVTNVDTSENRMAELEKKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKG 144
Query: 61 KTIVQDDQPQCSASVASLSIQQLQDMITNCIRAQYGGPTRDSLLYSKPYTKRIDNLRTPI 120
K ++Q+ QPQ S S+ASLS+QQLQ+MI + I+ QYGGP + LYSKPYTKRIDNLR P
Sbjct: 145 KAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPN 204
Query: 121 RYQPPKFQQFDGKSNHKQHIAHFVETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLEPES 180
YQPPKFQQFDGK N KQH+AHF+ETCE AGTRGDLLVKQFVRTLKGNAFD Y DLEPES
Sbjct: 205 GYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDLYMDLEPES 264
Query: 181 VHSWEELEREFLNRFYSTRRTVSMFELTNTKQQKGELVVNYINRWRAMSLDCKDRLTELS 240
+ +WE+LER+FLNRFYSTRR VSM ELTNT+QQKGELV++YINRWRA+SLDCKDRLTELS
Sbjct: 265 IDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELS 324
Query: 241 SVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDE 300
+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSI +R +D L+P R +
Sbjct: 325 AVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIPNRGAKDFLIPKSRSDKNELN 384
Query: 301 ET-------IEKSMVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQKKIYPFPDAD 360
+T I++SMVV+ T KS SK K R+ +G TLKERQ+K+YPF D+D
Sbjct: 385 DTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFSDSD 444
Query: 361 IPDMLEQVLEAHLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKE 420
+ DMLEQ+LE LI+LPKCKRP++ EKVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E
Sbjct: 445 VADMLEQLLENQLIQLPKCKRPKQAEKVDDPNYCKYHRVISHPVEKCFVLKELILKLARE 504
Query: 421 GKIELDLDEVAQSN-LAI------------------------------------------ 480
KIEL++DEVAQ+N +AI
Sbjct: 505 KKIELNIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTSILFQQRIVTINSQNKEA 564
Query: 481 -------------------------------------VKGKSKHQRKKDLKKLQPKRKRS 540
+ K K +R K + +P + +
Sbjct: 565 HGKDDDEGWITVTRQKGRQPNSIQKESQFHQKYAKGSISHKKKGRRNKKMWNPKPIKGKD 624
Query: 541 KKFSQPQQQVMLNKSFSKTF---HKKEKVNFATFYCIDVEEVNNSKKS----------EQ 559
+ F Q ++ + L + ++F H +E + T + + EVNN+ S Q
Sbjct: 625 EDFLQLRRSITLAEFLPRSFLEDHPEEILEVTTCHAASIVEVNNNYGSSKEVNNLNEINQ 684
BLAST of Lag0031384 vs. NCBI nr
Match:
KAA0047477.1 (uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa])
HSP 1 Score: 587.4 bits (1513), Expect = 2.0e-163
Identity = 296/436 (67.89%), Postives = 355/436 (81.42%), Query Frame = 0
Query: 1 MITETRTMEERMTQMQKHINNLMKAIEEKDSQIAQLKCQIENQHISESSQTQVIKNHDKG 60
M+T+ T E+RM +++K +N LMKA+EE+D +IA LK IE++ +ESS T IKN +KG
Sbjct: 85 MVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALLKNHIESRDAAESSHTHTIKNANKG 144
Query: 61 KTIVQDDQPQCSASVASLSIQQLQDMITNCIRAQYGGPTRDSLLYSKPYTKRIDNLRTPI 120
K I+Q+ QPQ S S+ASLS+QQLQ+MI N I+ QYGGP + LYSKPYTKRIDN+R P
Sbjct: 145 KAIMQESQPQNSTSIASLSVQQLQEMIANSIKTQYGGPAQTFSLYSKPYTKRIDNMRMPH 204
Query: 121 RYQPPKFQQFDGKSNHKQHIAHFVETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLEPES 180
YQPPKFQQFDGK N KQH+AHF+ETCE AGTRGDLLVKQFVRTLKGNAFDWYTDLEPES
Sbjct: 205 GYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYTDLEPES 264
Query: 181 VHSWEELEREFLNRFYSTRRTVSMFELTNTKQQKGELVVNYINRWRAMSLDCKDRLTELS 240
+ SWE+LER+FLNRFYSTRR VSM ELT TKQ+KGE V++YINRWRA+SLDCKDRLTELS
Sbjct: 265 IDSWEQLERDFLNRFYSTRRIVSMIELTATKQRKGEPVIDYINRWRALSLDCKDRLTELS 324
Query: 241 SVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDE 300
+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIA+R N DLL+P +RKE + +
Sbjct: 325 AVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGNNDLLVPEVRKEKKEVK 384
Query: 301 ET-------IEKSMVVNTT----LPKSSSKEKRQTNG-THHLTLKERQKKIYPFPDADIP 360
T +++MVV+TT + K EKRQ G TLKERQ+K+YPFPD+D+P
Sbjct: 385 STQKALKGVTKEAMVVSTTPLKLVSKEKKMEKRQDEGEKRRPTLKERQEKVYPFPDSDLP 444
Query: 361 DMLEQVLEAHLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGK 420
DML+Q+LE LI+LP+CKRP EM +V+DP YCKYHRVI HPVE+CFVLK+LILKLA + K
Sbjct: 445 DMLDQLLEKQLIQLPECKRPAEMGRVNDPNYCKYHRVISHPVEKCFVLKELILKLALDKK 504
Query: 421 IELDLDEVAQSNLAIV 425
IEL+LD+VAQ+N A V
Sbjct: 505 IELELDDVAQTNHAAV 520
BLAST of Lag0031384 vs. NCBI nr
Match:
KAA0047477.1 (uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa])
HSP 1 Score: 47.0 bits (110), Expect = 9.7e-01
Identity = 49/140 (35.00%), Postives = 71/140 (50.71%), Query Frame = 0
Query: 438 KLQPKRKRSKK--FSQPQQQVMLNKSFSKTFH--KKEKVNFATFYCIDVEEVNNSKKSE- 497
+L P +K+ +K +S P + + S+ K K A I VEE +S++ +
Sbjct: 1052 ELSPTQKKLQKQGYSIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKK 1111
Query: 498 ---QRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTFIRPSAFQRLSVSTSK---- 557
QR+SVFDRI RPS FQR+S + ++ NQ S + R SAFQRL+ S K
Sbjct: 1112 VRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKKVRSI 1171
Query: 558 KSRPST--SVFYRLKFLVSK 564
P+T S F RL V++
Sbjct: 1172 SPTPTTRKSAFKRLSVSVTR 1191
HSP 2 Score: 584.7 bits (1506), Expect = 1.3e-162
Identity = 293/434 (67.51%), Postives = 348/434 (80.18%), Query Frame = 0
Query: 1 MITETRTMEERMTQMQKHINNLMKAIEEKDSQIAQLKCQIENQHISESSQTQVIKNHDKG 60
M+T T E RM +++K +N LMK +EE+D +IA LK IE++ +ESS ++KN DKG
Sbjct: 53 MVTNVDTSENRMAELEKKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHIVKNTDKG 112
Query: 61 KTIVQDDQPQCSASVASLSIQQLQDMITNCIRAQYGGPTRDSLLYSKPYTKRIDNLRTPI 120
K ++Q+ QPQ S S+ASLS+QQLQ+MI + I+ QYGGP + LYSKPYTKRIDNLR P
Sbjct: 113 KAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPN 172
Query: 121 RYQPPKFQQFDGKSNHKQHIAHFVETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLEPES 180
YQPPKFQQFDGK N KQH+AHF+ETCE AGTRGDLLVKQFVRTLKGNAFDWY DLEPES
Sbjct: 173 GYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPES 232
Query: 181 VHSWEELEREFLNRFYSTRRTVSMFELTNTKQQKGELVVNYINRWRAMSLDCKDRLTELS 240
+ +WE+LER+FLNRFYSTRR VSM ELTNT+QQKGELV+NYINRWRA+SLDCKDRLTELS
Sbjct: 233 IDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVINYINRWRALSLDCKDRLTELS 292
Query: 241 SVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDE 300
+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIA+R +D L+P R + +
Sbjct: 293 AVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELD 352
Query: 301 ET-------IEKSMVVNTTLPKSSSKEKRQTNGTHH-------LTLKERQKKIYPFPDAD 360
+T I++SMVV+ T KS SK K H TLKERQ+K+YPFPD+D
Sbjct: 353 DTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHDDDEKRQSTLKERQEKVYPFPDSD 412
Query: 361 IPDMLEQVLEAHLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKE 420
+ DMLEQ+LE LI+LP+CKRPE+ EKVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E
Sbjct: 413 VADMLEQLLENQLIQLPECKRPEQAEKVDDPNYCKYHRVISHPVEKCFVLKELILKLARE 472
BLAST of Lag0031384 vs. NCBI nr
Match:
XP_031742199.1 (uncharacterized protein LOC105435721 [Cucumis sativus])
HSP 1 Score: 583.6 bits (1503), Expect = 2.9e-162
Identity = 298/431 (69.14%), Postives = 359/431 (83.29%), Query Frame = 0
Query: 8 MEERMTQMQKHINNLMKAIEEKDSQIAQLKCQIENQHISESSQTQVIKNHDKGKTIVQDD 67
+E M +M++ IN LMK ++E+D +IA LK Q++ + +ESSQT V+K DKGK +VQ++
Sbjct: 91 VETAMAEMERKINLLMKVVDERDHEIAALKEQMQTRETAESSQTPVVKVDDKGKNVVQEN 150
Query: 68 QP-QCSASVASLSIQQLQDMITNCIRAQYGGPTRDSLLYSKPYTKRIDNLRTPIRYQPPK 127
QP Q S SVASLS+QQLQDMITN IRAQYGGP++ S +YSKPYTKRIDNLR P+ YQPPK
Sbjct: 151 QPQQQSTSVASLSVQQLQDMITNSIRAQYGGPSQTSFMYSKPYTKRIDNLRMPLGYQPPK 210
Query: 128 FQQFDGKSNHKQHIAHFVETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESVHSWEE 187
FQQFDGK N KQH+AHFVETCENAG+RGD LV+QFVR+LKGNAF+WYTDLEPES+ SWE+
Sbjct: 211 FQQFDGKGNPKQHVAHFVETCENAGSRGDQLVRQFVRSLKGNAFEWYTDLEPESIESWEQ 270
Query: 188 LEREFLNRFYSTRRTVSMFELTNTKQQKGELVVNYINRWRAMSLDCKDRLTELSSVEMCI 247
LE+EFLNRFYSTRRTVSM ELTNTKQ+KGE V++YINRWRA+SLDCKDRLTELS+VEMC
Sbjct: 271 LEKEFLNRFYSTRRTVSMMELTNTKQRKGEPVIDYINRWRALSLDCKDRLTELSAVEMCT 330
Query: 248 QGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRN-------D 307
QGMHW LLYIL+GIKPRTFEELATRAHDMELSIASR +D L+P ++K+ +
Sbjct: 331 QGMHWGLLYILQGIKPRTFEELATRAHDMELSIASRGTKDFLVPEVKKDKKEMKGAEKIV 390
Query: 308 EETIEKSMVVNTT-LPKSSSKEKR---QTNGT--HHLTLKERQKKIYPFPDADIPDMLEQ 367
+ T ++SMVVNTT L S KE R + +G+ LTLKERQ+K+YPFPD+DI DMLEQ
Sbjct: 391 KSTSKESMVVNTTPLKFSKGKEARVEKKDDGSERRRLTLKERQEKVYPFPDSDIADMLEQ 450
Query: 368 VLEAHLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDL 425
+LE LI+LP+CKRPE+ KVDDP YCKYHRVI HPVE+CFVLK+LIL+LA+E +IELDL
Sbjct: 451 LLEKQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILRLAREKRIELDL 510
BLAST of Lag0031384 vs. ExPASy TrEMBL
Match:
A0A5A7URH1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17350G00010 PE=4 SV=1)
HSP 1 Score: 636.0 bits (1639), Expect = 2.4e-178
Identity = 349/582 (59.97%), Postives = 428/582 (73.54%), Query Frame = 0
Query: 1 MITETRTMEERMTQMQKHINNLMKAIEEKDSQIAQLKCQIENQHISESSQTQVIKNHDKG 60
M+T T E RM +++K +N LMK +EE+D +IA LK IE++ +ESS +KN DKG
Sbjct: 85 MVTNVDTSENRMAELEKKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKG 144
Query: 61 KTIVQDDQPQCSASVASLSIQQLQDMITNCIRAQYGGPTRDSLLYSKPYTKRIDNLRTPI 120
K ++Q+ QPQ S S+ASLS+QQLQ+MI + I+ QYGGP + LY KPYTKRIDNLR P
Sbjct: 145 KAVMQESQPQNSTSIASLSVQQLQEMIASSIKMQYGGPAQTFSLYFKPYTKRIDNLRMPN 204
Query: 121 RYQPPKFQQFDGKSNHKQHIAHFVETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLEPES 180
YQPPKFQQFDGK N KQH+AHF++TCE AGTRGDLLVKQFVRTLKGNA DWY DLEPES
Sbjct: 205 GYQPPKFQQFDGKGNPKQHVAHFIKTCETAGTRGDLLVKQFVRTLKGNACDWYIDLEPES 264
Query: 181 VHSWEELEREFLNRFYSTRRTVSMFELTNTKQQKGELVVNYINRWRAMSLDCKDRLTELS 240
+ +WE+LER+FLNRFYSTR VSM ELTNT+QQKGELV++YINRWRA+SLDCKDRLTELS
Sbjct: 265 IDNWEQLERDFLNRFYSTRHIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELS 324
Query: 241 SVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDE 300
+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIA+R +D L+P R + +
Sbjct: 325 AVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELD 384
Query: 301 ET-------IEKSMVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQKKIYPFPDAD 360
+T I++SMVV+ T KS SK K R+ +G TLKERQ+K+YPFPD+D
Sbjct: 385 DTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSD 444
Query: 361 IPDMLEQVLEAHLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKE 420
+ DMLEQ+LE LI+LP+CKRPE+ KVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E
Sbjct: 445 VADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLARE 504
Query: 421 GKIELDLDEVAQSNLAI------VKGKSKH----QRKKDLKKLQPKRKRSKKFSQPQQQV 480
KIELD+DEVAQ+N AI +KGK + +R L + P RS P++ +
Sbjct: 505 KKIELDIDEVAQTNHAIEMTSNPIKGKDEDFLQLRRSITLAEFLP---RSFLEDDPEEIL 564
Query: 481 MLNKSFSKTFHKKEKVNFATFYCIDVEEVNNSKKSEQRTSVFDRIKPPTTRPSAFQRMSM 540
+ + + + + N+ + +EVNNS + QRTSVFDRIKP TTR S FQR+S+
Sbjct: 565 EVTACHAASIVEVDN-NYGS-----SKEVNNSNEINQRTSVFDRIKPSTTRSSVFQRLSV 624
Query: 541 AATEEENQCSMSTFIRPSAFQRLSVSTSKKSRPSTSVFYRLK 559
A EEENQC + R S +RLS+ST KK RPSTS F RLK
Sbjct: 625 ATKEEENQCPTFIYTRTSTSKRLSISTLKKDRPSTSSFDRLK 657
BLAST of Lag0031384 vs. ExPASy TrEMBL
Match:
A0A5D3BX77 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00570 PE=4 SV=1)
HSP 1 Score: 620.9 bits (1600), Expect = 7.9e-174
Identity = 354/665 (53.23%), Postives = 435/665 (65.41%), Query Frame = 0
Query: 1 MITETRTMEERMTQMQKHINNLMKAIEEKDSQIAQLKCQIENQHISESSQTQVIKNHDKG 60
M+T T E RM +++K +N LMK +EE+D +IA LK IE++ +ESS +KN DKG
Sbjct: 85 MVTNVDTSENRMAELEKKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKG 144
Query: 61 KTIVQDDQPQCSASVASLSIQQLQDMITNCIRAQYGGPTRDSLLYSKPYTKRIDNLRTPI 120
K ++Q+ QPQ S S+ASLS+QQLQ+MI + I+ QYGGP + LYSKPYTKRIDNLR P
Sbjct: 145 KAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPN 204
Query: 121 RYQPPKFQQFDGKSNHKQHIAHFVETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLEPES 180
YQPPKFQQFDGK N KQH+AHF+ETCE AGTRGDLLVKQFVRTLKGNAFD Y DLEPES
Sbjct: 205 GYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDLYMDLEPES 264
Query: 181 VHSWEELEREFLNRFYSTRRTVSMFELTNTKQQKGELVVNYINRWRAMSLDCKDRLTELS 240
+ +WE+LER+FLNRFYSTRR VSM ELTNT+QQKGELV++YINRWRA+SLDCKDRLTELS
Sbjct: 265 IDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELS 324
Query: 241 SVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDE 300
+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSI +R +D L+P R +
Sbjct: 325 AVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIPNRGAKDFLIPKSRSDKNELN 384
Query: 301 ET-------IEKSMVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQKKIYPFPDAD 360
+T I++SMVV+ T KS SK K R+ +G TLKERQ+K+YPF D+D
Sbjct: 385 DTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFSDSD 444
Query: 361 IPDMLEQVLEAHLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKE 420
+ DMLEQ+LE LI+LPKCKRP++ EKVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E
Sbjct: 445 VADMLEQLLENQLIQLPKCKRPKQAEKVDDPNYCKYHRVISHPVEKCFVLKELILKLARE 504
Query: 421 GKIELDLDEVAQSN-LAI------------------------------------------ 480
KIEL++DEVAQ+N +AI
Sbjct: 505 KKIELNIDEVAQTNHVAIEMTSNVPPLTQLDDQRKSLIQFGTSILFQQRIVTINSQNKEA 564
Query: 481 -------------------------------------VKGKSKHQRKKDLKKLQPKRKRS 540
+ K K +R K + +P + +
Sbjct: 565 HGKDDDEGWITVTRQKGRQPNSIQKESQFHQKYAKGSISHKKKGRRNKKMWNPKPIKGKD 624
Query: 541 KKFSQPQQQVMLNKSFSKTF---HKKEKVNFATFYCIDVEEVNNSKKS----------EQ 559
+ F Q ++ + L + ++F H +E + T + + EVNN+ S Q
Sbjct: 625 EDFLQLRRSITLAEFLPRSFLEDHPEEILEVTTCHAASIVEVNNNYGSSKEVNNLNEINQ 684
BLAST of Lag0031384 vs. ExPASy TrEMBL
Match:
A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)
HSP 1 Score: 587.4 bits (1513), Expect = 9.7e-164
Identity = 296/436 (67.89%), Postives = 355/436 (81.42%), Query Frame = 0
Query: 1 MITETRTMEERMTQMQKHINNLMKAIEEKDSQIAQLKCQIENQHISESSQTQVIKNHDKG 60
M+T+ T E+RM +++K +N LMKA+EE+D +IA LK IE++ +ESS T IKN +KG
Sbjct: 85 MVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALLKNHIESRDAAESSHTHTIKNANKG 144
Query: 61 KTIVQDDQPQCSASVASLSIQQLQDMITNCIRAQYGGPTRDSLLYSKPYTKRIDNLRTPI 120
K I+Q+ QPQ S S+ASLS+QQLQ+MI N I+ QYGGP + LYSKPYTKRIDN+R P
Sbjct: 145 KAIMQESQPQNSTSIASLSVQQLQEMIANSIKTQYGGPAQTFSLYSKPYTKRIDNMRMPH 204
Query: 121 RYQPPKFQQFDGKSNHKQHIAHFVETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLEPES 180
YQPPKFQQFDGK N KQH+AHF+ETCE AGTRGDLLVKQFVRTLKGNAFDWYTDLEPES
Sbjct: 205 GYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYTDLEPES 264
Query: 181 VHSWEELEREFLNRFYSTRRTVSMFELTNTKQQKGELVVNYINRWRAMSLDCKDRLTELS 240
+ SWE+LER+FLNRFYSTRR VSM ELT TKQ+KGE V++YINRWRA+SLDCKDRLTELS
Sbjct: 265 IDSWEQLERDFLNRFYSTRRIVSMIELTATKQRKGEPVIDYINRWRALSLDCKDRLTELS 324
Query: 241 SVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDE 300
+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIA+R N DLL+P +RKE + +
Sbjct: 325 AVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGNNDLLVPEVRKEKKEVK 384
Query: 301 ET-------IEKSMVVNTT----LPKSSSKEKRQTNG-THHLTLKERQKKIYPFPDADIP 360
T +++MVV+TT + K EKRQ G TLKERQ+K+YPFPD+D+P
Sbjct: 385 STQKALKGVTKEAMVVSTTPLKLVSKEKKMEKRQDEGEKRRPTLKERQEKVYPFPDSDLP 444
Query: 361 DMLEQVLEAHLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGK 420
DML+Q+LE LI+LP+CKRP EM +V+DP YCKYHRVI HPVE+CFVLK+LILKLA + K
Sbjct: 445 DMLDQLLEKQLIQLPECKRPAEMGRVNDPNYCKYHRVISHPVEKCFVLKELILKLALDKK 504
Query: 421 IELDLDEVAQSNLAIV 425
IEL+LD+VAQ+N A V
Sbjct: 505 IELELDDVAQTNHAAV 520
BLAST of Lag0031384 vs. ExPASy TrEMBL
Match:
A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)
HSP 1 Score: 47.0 bits (110), Expect = 4.7e-01
Identity = 49/140 (35.00%), Postives = 71/140 (50.71%), Query Frame = 0
Query: 438 KLQPKRKRSKK--FSQPQQQVMLNKSFSKTFH--KKEKVNFATFYCIDVEEVNNSKKSE- 497
+L P +K+ +K +S P + + S+ K K A I VEE +S++ +
Sbjct: 1052 ELSPTQKKLQKQGYSIPNSRAGIGYQSSEPVRITGKGKAKVANTCHITVEESKDSEEGKK 1111
Query: 498 ---QRTSVFDRIKPPTTRPSAFQRMSMAATEEENQCSMSTFIRPSAFQRLSVSTSK---- 557
QR+SVFDRI RPS FQR+S + ++ NQ S + R SAFQRL+ S K
Sbjct: 1112 VRSQRSSVFDRIAFSAIRPSVFQRVSTSIAKDSNQVSTCSSTRLSAFQRLNTSAKKVRSI 1171
Query: 558 KSRPST--SVFYRLKFLVSK 564
P+T S F RL V++
Sbjct: 1172 SPTPTTRKSAFKRLSVSVTR 1191
HSP 2 Score: 584.7 bits (1506), Expect = 6.3e-163
Identity = 293/434 (67.51%), Postives = 348/434 (80.18%), Query Frame = 0
Query: 1 MITETRTMEERMTQMQKHINNLMKAIEEKDSQIAQLKCQIENQHISESSQTQVIKNHDKG 60
M+T T E RM +++K +N LMK +EE+D +IA LK IE++ +ESS ++KN DKG
Sbjct: 53 MVTNVDTSENRMAELEKKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHIVKNTDKG 112
Query: 61 KTIVQDDQPQCSASVASLSIQQLQDMITNCIRAQYGGPTRDSLLYSKPYTKRIDNLRTPI 120
K ++Q+ QPQ S S+ASLS+QQLQ+MI + I+ QYGGP + LYSKPYTKRIDNLR P
Sbjct: 113 KAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPN 172
Query: 121 RYQPPKFQQFDGKSNHKQHIAHFVETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLEPES 180
YQPPKFQQFDGK N KQH+AHF+ETCE AGTRGDLLVKQFVRTLKGNAFDWY DLEPES
Sbjct: 173 GYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPES 232
Query: 181 VHSWEELEREFLNRFYSTRRTVSMFELTNTKQQKGELVVNYINRWRAMSLDCKDRLTELS 240
+ +WE+LER+FLNRFYSTRR VSM ELTNT+QQKGELV+NYINRWRA+SLDCKDRLTELS
Sbjct: 233 IDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVINYINRWRALSLDCKDRLTELS 292
Query: 241 SVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDE 300
+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIA+R +D L+P R + +
Sbjct: 293 AVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELD 352
Query: 301 ET-------IEKSMVVNTTLPKSSSKEKRQTNGTHH-------LTLKERQKKIYPFPDAD 360
+T I++SMVV+ T KS SK K H TLKERQ+K+YPFPD+D
Sbjct: 353 DTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHDDDEKRQSTLKERQEKVYPFPDSD 412
Query: 361 IPDMLEQVLEAHLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKE 420
+ DMLEQ+LE LI+LP+CKRPE+ EKVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E
Sbjct: 413 VADMLEQLLENQLIQLPECKRPEQAEKVDDPNYCKYHRVISHPVEKCFVLKELILKLARE 472
BLAST of Lag0031384 vs. ExPASy TrEMBL
Match:
A0A5D3D4X3 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001130 PE=4 SV=1)
HSP 1 Score: 578.2 bits (1489), Expect = 5.9e-161
Identity = 291/434 (67.05%), Postives = 350/434 (80.65%), Query Frame = 0
Query: 1 MITETRTMEERMTQMQKHINNLMKAIEEKDSQIAQLKCQIENQHISESSQTQVIKNHDKG 60
M+T+ E+RM +++K +N LMK +EE+D +IA LK IE++ +ESS +KN DKG
Sbjct: 53 MVTDVDESEDRMAELEKKVNMLMKVVEERDYEIAFLKNHIESRDAAESSHKHTVKNTDKG 112
Query: 61 KTIVQDDQPQCSASVASLSIQQLQDMITNCIRAQYGGPTRDSLLYSKPYTKRIDNLRTPI 120
K ++Q+ QPQ S S+ASLS+QQLQ+MI + I+ QYGGP + LYSKPYTKRIDNLR P
Sbjct: 113 KAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQYGGPAQTFSLYSKPYTKRIDNLRMPN 172
Query: 121 RYQPPKFQQFDGKSNHKQHIAHFVETCENAGTRGDLLVKQFVRTLKGNAFDWYTDLEPES 180
YQPPKFQQFDGK N KQH+AHF+ETCE AGTRGDLLVKQFVRTLKGNAFDWY DLEPES
Sbjct: 173 GYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPES 232
Query: 181 VHSWEELEREFLNRFYSTRRTVSMFELTNTKQQKGELVVNYINRWRAMSLDCKDRLTELS 240
+ +WE+LER+FLNRFYSTRR VSM ELTNT+QQKGELV++YINRWRA+SLDCKDRLTELS
Sbjct: 233 IDNWEQLERDFLNRFYSTRRIVSMMELTNTRQQKGELVIDYINRWRALSLDCKDRLTELS 292
Query: 241 SVEMCIQGMHWELLYILKGIKPRTFEELATRAHDMELSIASRENQDLLLPNMRKEGRNDE 300
+VEMC QGMHW LLYIL+GIKPRTFEELATRAHDMELSIA+R +D L+P R + +
Sbjct: 293 AVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGAKDFLIPKSRSDKNELD 352
Query: 301 ET-------IEKSMVVNTTLPKSSSKEK-----RQTNG--THHLTLKERQKKIYPFPDAD 360
+T I++SMVV+ T KS SK K R+ +G TLKERQ+K+YPFPD+D
Sbjct: 353 DTKKIANSVIKESMVVHATPLKSFSKRKETKIERKHDGDEKRQSTLKERQEKVYPFPDSD 412
Query: 361 IPDMLEQVLEAHLIELPKCKRPEEMEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKE 420
+ DMLEQ+LE LI+LP+CKRPE+ KVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E
Sbjct: 413 VADMLEQLLENQLIQLPECKRPEQAGKVDDPNYCKYHRVISHPVEKCFVLKELILKLARE 472
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0056121.1 | 4.9e-178 | 59.97 | ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | [more] |
TYK03695.1 | 1.6e-173 | 53.23 | retrotransposon gag protein [Cucumis melo var. makuwa] | [more] |
KAA0047477.1 | 2.0e-163 | 67.89 | uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa] | [more] |
KAA0047477.1 | 9.7e-01 | 35.00 | uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa] | [more] |
XP_031742199.1 | 2.9e-162 | 69.14 | uncharacterized protein LOC105435721 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7URH1 | 2.4e-178 | 59.97 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5D3BX77 | 7.9e-174 | 53.23 | Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... | [more] |
A0A5A7TZU9 | 9.7e-164 | 67.89 | Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940... | [more] |
A0A5A7TZU9 | 4.7e-01 | 35.00 | Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940... | [more] |
A0A5D3D4X3 | 5.9e-161 | 67.05 | Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
Match Name | E-value | Identity | Description | |