
Lag0031381 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCTTGGCAACGCTCGCCGCCGTTCAGCCGGTCACCGTAAAGGGCCTTGGTGGAAGCTCCCTTGCCGGAACCAAGCTCCCTCTCAGGCCCTCTCGCCAGAGCTTCAGACCCAAAAACTTCAAGTACCATAATCTATCACCAAAAATCTTCTCTGATTGCTTTGTTTTTTCTGGTACATATTGGTTTGAAATCTTATGAATCTTGTGGGTTTTCTTTTTTGTTTACTCTGTTTTCAGGGCTGGTGCTGTGGTGGCTAAGTATGGTGACAAAAGTGTTTACTTTGATTTGGAGGATTTGGGTAACACTACTGGACAGTGGGATTTGTATGGATCTGATGCTCCTTCACCTTACAATTCTCTTCAGGTTTGTGATTCATTGTCTTGCTTTAATGAATTGGAAAAATGGGTCTGAACAGAACAGAGTAATTGGTTAGTTCTTTGTGGTGGGAATGAAGATGAAAGAAGCCTTCTTTGTTTGCTTTTGAACTTCAATCACTTTCTTCAAACTAGGTGTGTGGCGGAGTGCTTTTAAGATTGAGTAATTTTAGCAAAGTGGTTTGATTATAAGCACTCTTGAGTGCTTGATGACAAATTACTTAGATGTTTATTTTTGCAGTGTCAAGAGTGTTTTCCTAACAATCAGGTCAAAAGAGTACTCTATGACTGCTTTTGCAAAATGGACTTAAGTGTTTTTTACTTTTTCCATTAACACTTATAGAACACTTCAGTTCAAATATAATGGTTTTGAGGGGAAGTATTTTGAGTATGGAAAGAGTGATTTTGGCATGGGAAAAGTTGTGAAGGTTTAAAATTAAGTAATTTTCGCTAATGTCCTTTGATTATAAGCACTTCTAGGTGCTTGATGACAAATTACTTTGATGTTCGATCTTATATTCTAGGATGCTTTCTCATAAAAGGATTCAAGTCTTCTTTACTTTTTCCACCAGTGCTTATAAAACACTTTTGAGTATACTTTGGGGTGCTTTCTCATAAAGAATTTTATACTCTAGGGTGCCTTTTCATTTTAAATATAATAATTTTGAGGGGAAGTACTTTTGAGTATGACGAAAGTGTTTTTGGCAAGGTTAGAAGTAATCAGAACATAACCATTTCTAACAACTTTTAGATTTCTGTGATATCTCTGTTGCTGCTTAGTTGGATTGAACTTCCCATTGACTTATTTTGGTACATTTTATAGAGCAAATTCTTTGAGACCTTTGCTGCTCCATTCACCAAGAGAGGATTGTTGCTCAAGTTCTTGCTACTAGGAGGTGGTGCCACTCTAGCTTATTATAGTGCCACTGCACCAGATGATGTTCTTCCAATCAAGAAAGGACCTCAACTTCCACCAAAACTCGGGCCACGTGGCAAGATCTAA ATGGCTTCCTTGGCAACGCTCGCCGCCGTTCAGCCGGTCACCGTAAAGGGCCTTGGTGGAAGCTCCCTTGCCGGAACCAAGCTCCCTCTCAGGCCCTCTCGCCAGAGCTTCAGACCCAAAAACTTCAAGGCTGGTGCTGTGGTGGCTAAGTATGGTGACAAAAGTGTTTACTTTGATTTGGAGGATTTGGGTAACACTACTGGACAGTGGGATTTGTATGGATCTGATGCTCCTTCACCTTACAATTCTCTTCAGAGCAAATTCTTTGAGACCTTTGCTGCTCCATTCACCAAGAGAGGATTGTTGCTCAAGTTCTTGCTACTAGGAGGTGGTGCCACTCTAGCTTATTATAGTGCCACTGCACCAGATGATGTTCTTCCAATCAAGAAAGGACCTCAACTTCCACCAAAACTCGGGCCACGTGGCAAGATCTAA ATGGCTTCCTTGGCAACGCTCGCCGCCGTTCAGCCGGTCACCGTAAAGGGCCTTGGTGGAAGCTCCCTTGCCGGAACCAAGCTCCCTCTCAGGCCCTCTCGCCAGAGCTTCAGACCCAAAAACTTCAAGGCTGGTGCTGTGGTGGCTAAGTATGGTGACAAAAGTGTTTACTTTGATTTGGAGGATTTGGGTAACACTACTGGACAGTGGGATTTGTATGGATCTGATGCTCCTTCACCTTACAATTCTCTTCAGAGCAAATTCTTTGAGACCTTTGCTGCTCCATTCACCAAGAGAGGATTGTTGCTCAAGTTCTTGCTACTAGGAGGTGGTGCCACTCTAGCTTATTATAGTGCCACTGCACCAGATGATGTTCTTCCAATCAAGAAAGGACCTCAACTTCCACCAAAACTCGGGCCACGTGGCAAGATCTAA MASLATLAAVQPVTVKGLGGSSLAGTKLPLRPSRQSFRPKNFKAGAVVAKYGDKSVYFDLEDLGNTTGQWDLYGSDAPSPYNSLQSKFFETFAAPFTKRGLLLKFLLLGGGATLAYYSATAPDDVLPIKKGPQLPPKLGPRGKI Homology
BLAST of Lag0031381 vs. NCBI nr
Match: XP_022955723.1 (photosystem I reaction center subunit VI, chloroplastic-like [Cucurbita moschata] >XP_022979288.1 photosystem I reaction center subunit VI, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 285.8 bits (730), Expect = 2.1e-73 Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of Lag0031381 vs. NCBI nr
Match: KAG7018324.1 (Photosystem I reaction center subunit VI, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 284.6 bits (727), Expect = 4.6e-73 Identity = 142/144 (98.61%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of Lag0031381 vs. NCBI nr
Match: KAG6581890.1 (Photosystem I reaction center subunit VI, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 284.6 bits (727), Expect = 4.6e-73 Identity = 142/144 (98.61%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of Lag0031381 vs. NCBI nr
Match: XP_008447512.1 (PREDICTED: photosystem I reaction center subunit VI, chloroplastic [Cucumis melo] >KAA0050789.1 photosystem I reaction center subunit VI [Cucumis melo var. makuwa] >TYK08557.1 photosystem I reaction center subunit VI [Cucumis melo var. makuwa]) HSP 1 Score: 284.3 bits (726), Expect = 6.0e-73 Identity = 142/144 (98.61%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of Lag0031381 vs. NCBI nr
Match: XP_011651500.1 (photosystem I reaction center subunit VI, chloroplastic [Cucumis sativus] >KGN58074.1 hypothetical protein Csa_023410 [Cucumis sativus]) HSP 1 Score: 283.1 bits (723), Expect = 1.3e-72 Identity = 141/144 (97.92%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of Lag0031381 vs. ExPASy Swiss-Prot
Match: P22179 (Photosystem I reaction center subunit VI, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAH PE=1 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 1.7e-62 Identity = 116/144 (80.56%), Postives = 130/144 (90.28%), Query Frame = 0
BLAST of Lag0031381 vs. ExPASy Swiss-Prot
Match: Q9SUI6 (Photosystem I reaction center subunit VI-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAH2 PE=2 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 1.6e-60 Identity = 117/145 (80.69%), Postives = 129/145 (88.97%), Query Frame = 0
BLAST of Lag0031381 vs. ExPASy Swiss-Prot
Match: O04006 (Photosystem I reaction center subunit VI, chloroplastic OS=Brassica campestris OX=3711 GN=PSAH PE=2 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 1.6e-60 Identity = 117/145 (80.69%), Postives = 130/145 (89.66%), Query Frame = 0
BLAST of Lag0031381 vs. ExPASy Swiss-Prot
Match: Q9SUI7 (Photosystem I reaction center subunit VI-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAH1 PE=2 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 6.1e-60 Identity = 114/145 (78.62%), Postives = 129/145 (88.97%), Query Frame = 0
BLAST of Lag0031381 vs. ExPASy Swiss-Prot
Match: A2Y7D9 (Photosystem I reaction center subunit VI, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=PSAH PE=2 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 2.5e-53 Identity = 107/142 (75.35%), Postives = 118/142 (83.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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