Lag0031341 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0031341
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	cytochrome c oxidase subunit 5b-1, mitochondrial-like
Location	chr11: 7227986 .. 7233521 (-)
RNA-Seq Expression	Lag0031341
Synteny	Lag0031341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAGGAGATTGCTCTCTTCGCAGCTCAAATCCCTAAAATCTCTTCCTTCATCATCGCCCCCCGCATCCGCTCCGTTGGGATGCGTTTCCACAGCCACTCGACTCGCTGCTTCTTCTCATGTTTCTCCTTCCCCGTCCGTCTCGCTCTTCGCTCGCCATTACGCCTCTGATTCTGGTAGATCTTGCTGTTTTATTTCGATTTTGTTGTCTGTTTTACTGTATGTATGAATCTATGATATGAGCGCGAATGTGGAATTGGTCTCGCGTGGTTGTTAATCGATTAGAACGTACACGCGTGGAGTGTTATGTATTGTGCAGTCTGTGTCACTGTATATTTGTGAATCTGTGATATGAGCGCGAATGTGTTTGGTTATTAATCGATTAGAATGTATACGCGTGGATTCTGATGTATTGTACAGTCTGTCACTGTTTGTGTGAATCTATAATATGGGCGCGGATGTGGTTTTGATCTCGTGTGGTTGTTGAACTTGAATTTATTTTTTGATGTAGCTGATACTGGTCTGAAGAAGAAGGTTGAGGATGTAATGCCAATCGCAACTGGACACGAGCGTGAAGAGCTTGAAGCTTCACTTGAGGTGATATTTCTCGTATTTCTTGCTTGCCTGGATCTCCTTTTGTTGCGTGCTTTCGTTTTTCTTTTTCTTGATGTTGTGAAAATCACCGGACTAAATAGTGAAGGTAAGCCAGGTTAAAATTTATGCCTTAATTGATCGATTTGTTTTCATTTTCAAACTGAGTCTGGTATGGTAATTCGGTTTCGGAAAGGCGGGTTAAAATTGGTTTAATGTTTGCAGGGAAGAGACATCCTTGATATAAACCATCCTGTTGGTCCCTTTGGAACTAAGGTTGGTGTAGTTTTTGATGAATTTTATCTTCGCTTGTTTTTGGTCGTTGGAAGTAACTCAGATGCTTCAACTTTTATTCAAGGTTCATTCCATGTAGATTTCAAGGCATGACAAGATAGCAATATTTGTTGAGCTTACTTTCACTTGTGTTTAAGCTGCAGTTTTGTTTTGCTATCATGATATCTCTTCTCTGGTTAAACTATTTCATTGAGGTCTCAAACTCAAAATATATGCAAACTGATTGTTCTGAATTTTGGTTTCTAGTTCTTTTTCCCTTCCTTCTCCTGATTATCCATGGTATTTATCTTTCTTTCATGCTCCATAGTGTATCATAATTTTGATTTCGGTAGGCATTCTTTCCTCTTTATCAACCAAGGAGATGACAGAAAACCTCTCAATTGGTTTGCATTAGAAAAGAAGTGAGAATGCTGAATTCTGCTACCTTCTGCTTCATTTAGAAGCAAGATTCTATTGTTCTGTCTCACTTCTAGCATACTCTCTAAAGATTCTAATGTTCTACACCAGCCTACCAACCTAAATCCAGTCTGGAAAATAAGGTCATTCAGAGAATCTTAGGCTTCCTTTTAAAGCTGTAATCGACAATCTTAGGCTCCTCTTCTAAACCCTACCTTTTGCATCTTGAATCAAGTCCTATTGTTCCTTTTAAACCATTTTTATTTTCTCTGGTTTAAAAGATTTTTTGTTCTGGAAAATTAAATGCTTGTGATTGCCCTGATTGGCTGCAAAAACAGTGATTCTTTTGTTCTCTCTCTAAACTCTAAACTGTTGTTTACTTGTTACAAAGCACTTGAATTGATGATTATACTTTTCAGCGTTGGGATCTTTTCATAATTTTTGGGCTATTTCCTCTTTCTCTTTGATGTTATTCTGGGCTCCAAGAGATTTGCATTCTCTCTTTAGTTTGGATTTGATTGGAAAATAACTAGTAAAAGATGGAATACCTTCTGGAGATGTCAGTTTCAACTCTTTGTTGCACGATTTGGTTAGAAATTTTTCACCTCATTTTGGAAGATTATTTTGTAAATTGGAAAGTTGTTTGAGGAAATAATCTTATTATATCTGTTGGTCTAAGAATGTAGCAAGGGATGGACATGTCGGTTGAGGGCCTGAGTGTTGAACCTTTGCTCAGTCCTTTGGTTGGAAGACTACTCCTTAATGTCTTTCAAAGTTGGAATATAAGGTGCATGAAATAAGGTTTCTCTCCGAGCCCTCATCTCACTCAGGAACCTTTGCTCAGTCCTTTGGTTGGAAGACTTAAACTCCTTAATGTCTTTCAAAGTTGGAATATAAGGTGCATGAAATAAGGTTTCTCCCCGTGCCCTTAATCTTTGACCCACCAACACCTGAAGAATAGAATCCCTAACATTATAAGGGCAAACAAAACTGAAGTTGGAGAGCTTGGAAAACTCTACCTATAGCCACTTAGAGAATTGGCAGTTCAAGAAGGGGTGCTTAGTGGATTCTTCATCTTTTTTCTGAACGGAATGGATCATGGGTGTGTTGGGTAAAACATAGAGGAGAGATCCTTCTTTGAACACAATCATTTGTATTAATCCCTTGAAAGAAAGCTGACCAAAGAAACACCTTGCACTTTTTAGGAAGCTTGGGTCTGCAAAACCTTTTTTATAAATCCAAGAGAAGAGAGGGTTTTTTGTAACCACAATATAATAAATAGAGCAAACTGAAAAGGCAATAGAAGTGGAATTTTAAACTCTTAGGATCCTGTTTTAAGGAGACACAAAAGAGTTCAAATTGCTACTAAGGATGACCCTCTCTTCGATTTCTTTCTGTTTTCTTGAAATTAACTTCGGATAAAGATCAGCTTCATTCCAAAAGTCTTGAACGAGAGGTCCTCTTGAGCTGGTAACCTCATACAACCAGCTAACATCGTCACTAAAGGGAGTGTTATAAGTTATTCTACCAAATACGCTATCACAATATGACTGAAGCACCATTACCCAATTGGAACAAGTAAATTATAATTGTTTAACACTAGAATAAGCTTATCAATGTCGTCAAACCATGGGCTTTTATTGGAAGAATAGGAACGTCCCTTTGTGAATGTCCCCTGGTGGACTACTTGATTGTCCTCCTGTTGGACTACTTCCTAAATCTGTTGACAATCACTATATATGCCAAAGATAATTATGTTCCTTGGGAGATCTCCATAACCACTTGCGAAGAAGATCAATGTTTTTCATTTTTATATTTGCTATGTTTAAATCTTCATTCATAAGAGAAAGAGAGACTAGAGACCACATCAACCTAACGAGGTGATTACTCCTTTTGCCATCTTAACCTTTGTTCTTCCTAAAAGTAATTCCTAATATGTCTTTCTCCAAAAGAAAGTATAAGGGAGATTGGTGAGGTCTCGTCGCATCAGTGAATCACTTGAGCCCATAATTCGAGTGAGATTGTCATGATGAAAATTTGTTCAATGAAAGTTCAATTTATTACCAAAAAAGAAAATCTTTTTCTTTATCAAAAGATGTCTCATTGTCTCTCCCAAAAAGTATTTTTCTTAATTAATATAATTGAAAAATCATATGAGTGAAAAGGCCATTGATTATATCTGGTTAACTCACCACGGGGTGTTTGGCCCAAGGAGTTGGGTGAAGTTGGATTTAGGTGGAGTTAATAACTCCACTCAACTTCTTGTTTGGCCCAAGGACATACAACACCCAATTGTGGGGCCCACAAACTTATTAACCAATTACAACACTCTAGTGTGGGTCCCACAAACTTATTAACTCCTATTCCAACATTCTATTGTGGGTCCCTTAAACTTATTAACTCCTATTCTAACTCCTTGGACAAAGCAACTCCAAATTTCATAACTAACAACTCCTTGGGTCAAACACCCCCGAAAGTTGAGGAGACTGAGAACCCTACTCTAGGTTTTCTTTGCAAAATTACTGTGAATATCTTTTTCAAAAAAAAAAAAAAATACTGTGAATATCTTTTTCAAAAAAAAAAAAAAATACTGTGAATATCAATGCCTTGATTTTCACCATCCCCATGACAGTACACCAACTTGGGAGAGAGAATTGTAGGATGAGAAATCTTCTTCCTTTCCAATATTTTATTATTTTGATCCTCATTTAACAATAGTGTTGTCTAAGGGCATCCAAGATACAATATGCTAAGCAGATCTATGGTGCATTGCTGCCACCTAAGTGGGAATTTCTACTGAGGTTCCTCCCCTTCTATTAAGGGTCCGTTTGGAATACATTTTAATTTACATGTTTTTCAAGAATGCATTTTTTAAAAAACATTTTGTATAAAAGTTGTTTATAATTTAAACACTCATATGTTTGGTAACATCTTCTCAAGTTATTGTTTACTTAGGAAGTCTTTTTAAAAAGTTAGTTTCAAGTGTTTCTCTCAAAATGATTTATTTATCAATCTCATTTTCTAATAAGTCATTTTTAGTGGTTGCCAAACACTAAATTTTTTTTGAAAATGATTTATTTTCAAAATTAAACACTTGAAAAGTTAAACCAAACACATCCCAAATTTCCGTTTAGTTTGTACCTTAGTGTTTATTTTGTATCTATGACTTTGACTATTCACTTTTATGTTCTTATCCAAAAACCATTCACTCTTATGTGGTTGTTGATTTTTTGATCAGTTGAGTTATTATCCAAGGCTTCACTTTTCTTCAATGAAGGCTGTAACTTTCTTTGCTCTTTATAGTGTCTGTGCCTTGCACATAGAAATACTGTGTTAGAGTATGTGAATGAAAGGAGTTTTCTTGCATGACTTATTTCTTGGAGAAATCTTATATTTTTTTATTTCTTTAGGAAGCACCTGCTGTTATCCAGTCATATTATGATGAAAGATTAGTTGGATGCCCCGGAGGCGAAGGGGTGGGTACTTGCAATCTCTCCTTTTCCACGCTTTTTGATAATTTGTCAAGTCTGACAAAATTTTACATAGACAAATTTGGTGTTTTTCAATTACACACGAGAATTTACATCTTATTTCTCTTGCATCCTTTCAAACTGTAGAGGATGAGCATGATGTTGTCTGGTTCCGGCTGAGGAAAGACGTGCCACATGAATGTCCTGTGTGCTCACAGTACTTTGTGGTGAGAATTTTATTTTAAATTACTATGTTATGTGGCATGATATGGGATGCTAGAAATTTGGTTGTGGGGTGAGGGGAGAACAAACTCTGGAACCTTACCATAAAGAGCTTCGCAAGGAGGAAACCAACACTTTCATATCCCAAATTTCTTGCCACGTTTTAGCTTAACCTTGAAAACTCTTATGTTTCGTTCCAACAAAACCTTCCATCATAAACCACGTATTGTATACTATTCCTTCACAAAATTTTCACAATTGTTAAAAATTGGCATTCTCCAACCAGCATGCCCAGAATGTAGCTCCATTTGAAGAGAAGGATAATACCATAACTGTGAAAAACTTTCACTGCGTATAACAAAATATGCAACATAGGGATTAGACTCTCTCTCTCTCTCTTCCATGTTATCCTACTTTCTACTTTGAAAGGATGGAGGCATTGGTGTCAAACTATTTATTGAGTTGCAGAATTTTCCTAATTGTAATTTGTGTTTGCAGCTGGAGGTTGTGGGACCTGGAGGATCGCCAGATGGTTATGGAAACGACGATCATCACCATTGA

mRNA sequence

ATGTGGAGGAGATTGCTCTCTTCGCAGCTCAAATCCCTAAAATCTCTTCCTTCATCATCGCCCCCCGCATCCGCTCCGTTGGGATGCGTTTCCACAGCCACTCGACTCGCTGCTTCTTCTCATGTTTCTCCTTCCCCGTCCGTCTCGCTCTTCGCTCGCCATTACGCCTCTGATTCTGCTGATACTGGTCTGAAGAAGAAGGTTGAGGATGTAATGCCAATCGCAACTGGACACGAGCGTGAAGAGCTTGAAGCTTCACTTGAGGGAAGAGACATCCTTGATATAAACCATCCTGTTGGTCCCTTTGGAACTAAGGAAGCACCTGCTGTTATCCAGTCATATTATGATGAAAGATTAGTTGGATGCCCCGGAGGCGAAGGGGTGGAGGATGAGCATGATGTTGTCTGGTTCCGGCTGAGGAAAGACGTGCCACATGAATGTCCTGTGTGCTCACAGTACTTTGTGCTGGAGGTTGTGGGACCTGGAGGATCGCCAGATGGTTATGGAAACGACGATCATCACCATTGA

Coding sequence (CDS)

ATGTGGAGGAGATTGCTCTCTTCGCAGCTCAAATCCCTAAAATCTCTTCCTTCATCATCGCCCCCCGCATCCGCTCCGTTGGGATGCGTTTCCACAGCCACTCGACTCGCTGCTTCTTCTCATGTTTCTCCTTCCCCGTCCGTCTCGCTCTTCGCTCGCCATTACGCCTCTGATTCTGCTGATACTGGTCTGAAGAAGAAGGTTGAGGATGTAATGCCAATCGCAACTGGACACGAGCGTGAAGAGCTTGAAGCTTCACTTGAGGGAAGAGACATCCTTGATATAAACCATCCTGTTGGTCCCTTTGGAACTAAGGAAGCACCTGCTGTTATCCAGTCATATTATGATGAAAGATTAGTTGGATGCCCCGGAGGCGAAGGGGTGGAGGATGAGCATGATGTTGTCTGGTTCCGGCTGAGGAAAGACGTGCCACATGAATGTCCTGTGTGCTCACAGTACTTTGTGCTGGAGGTTGTGGGACCTGGAGGATCGCCAGATGGTTATGGAAACGACGATCATCACCATTGA

Protein sequence

MWRRLLSSQLKSLKSLPSSSPPASAPLGCVSTATRLAASSHVSPSPSVSLFARHYASDSADTGLKKKVEDVMPIATGHEREELEASLEGRDILDINHPVGPFGTKEAPAVIQSYYDERLVGCPGGEGVEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGYGNDDHHH

Homology

[Close]

BLAST of Lag0031341 vs. NCBI nr
Match: XP_038896495.1 (cytochrome c oxidase subunit 5b-2, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 327.0 bits (837), Expect = 9.8e-86
Identity = 160/175 (91.43%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 1   MWRRLLSSQLKSLKSLPSSSPPASAPLGCVSTATRLAASSHVSPSPSVSLFARHYASDSA 60
           MWRRLLSS LKSLKSLPSSS PASAPLG +S ATR AA SHVSPSP+VSLFA HYASDSA
Sbjct: 1   MWRRLLSSPLKSLKSLPSSSTPASAPLGYISKATRRAAVSHVSPSPAVSLFASHYASDSA 60

Query: 61  DTGLKKKVEDVMPIATGHEREELEASLEGRDILDINHPVGPFGTKEAPAVIQSYYDERLV 120
           DTGLKKKVED+MPIATGHEREELEASLEG+DILDINHPVGPFGTKEAPAVI+SYYDERLV
Sbjct: 61  DTGLKKKVEDIMPIATGHEREELEASLEGKDILDINHPVGPFGTKEAPAVIKSYYDERLV 120

Query: 121 GCPGGEGVEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGYGNDDHHH 176
           GCPGGEG EDEHDVVWFRLRK VPHECPVCSQYFVLEVVGPGGSPDGYG+DDHHH
Sbjct: 121 GCPGGEG-EDEHDVVWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGDDDHHH 174

[Close]

BLAST of Lag0031341 vs. NCBI nr
Match: KAA0038130.1 (cytochrome c oxidase subunit 5b-2 [Cucumis melo var. makuwa] >TYK20477.1 cytochrome c oxidase subunit 5b-2 [Cucumis melo var. makuwa])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 158/175 (90.29%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 1   MWRRLLSSQLKSLKSLPSSSPPASAPLGCVSTATRLAASSHVSPSPSVSLFARHYASDSA 60
           MWRRLLSS LKSLKSLPSSS PASAPLGC+S A RL A+SH+SPS +VSLFARHYASDSA
Sbjct: 1   MWRRLLSSSLKSLKSLPSSSTPASAPLGCISQAARLGAASHLSPSSTVSLFARHYASDSA 60

Query: 61  DTGLKKKVEDVMPIATGHEREELEASLEGRDILDINHPVGPFGTKEAPAVIQSYYDERLV 120
           DTGLKKKVEDVMPIATGHEREELEASLEG+DILDINHPVGPFGTKEAPAVI+SYYDER+V
Sbjct: 61  DTGLKKKVEDVMPIATGHEREELEASLEGKDILDINHPVGPFGTKEAPAVIKSYYDERIV 120

Query: 121 GCPGGEGVEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGYGNDDHHH 176
           GCPGGE  EDEHDVVWFRLRK VPHECPVCSQYFVLEVVGPGGSPDGYG+DDHHH
Sbjct: 121 GCPGGED-EDEHDVVWFRLRKGVPHECPVCSQYFVLEVVGPGGSPDGYGDDDHHH 174

[Close]

BLAST of Lag0031341 vs. NCBI nr
Match: XP_022998035.1 (cytochrome c oxidase subunit 5b-2, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 325.5 bits (833), Expect = 2.9e-85
Identity = 160/175 (91.43%), Postives = 165/175 (94.29%), Query Frame = 0


Query: 1   MWRRLLSSQLKSLKSLPSSSPPASAPLGCVSTATRLAASSHVSPSPSVSLFARHYASDSA 60
           MWRRLLSSQLK+LKSLPSSS PASAPLGC+S ATRLAASS VS S SVSLFARHYASDSA
Sbjct: 1   MWRRLLSSQLKALKSLPSSSTPASAPLGCISQATRLAASSRVSHSSSVSLFARHYASDSA 60

Query: 61  DTGLKKKVEDVMPIATGHEREELEASLEGRDILDINHPVGPFGTKEAPAVIQSYYDERLV 120
           DTGLKKK EDV+PI TGHEREELEASLEGRDILDINHPVGPFGTKE PAVI+SYYDERLV
Sbjct: 61  DTGLKKKAEDVIPIVTGHEREELEASLEGRDILDINHPVGPFGTKEEPAVIKSYYDERLV 120

Query: 121 GCPGGEGVEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGYGNDDHHH 176
           GCPGGEG EDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGYG+DDH H
Sbjct: 121 GCPGGEG-EDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGYGDDDHQH 174

[Close]

BLAST of Lag0031341 vs. NCBI nr
Match: XP_023523890.1 (cytochrome c oxidase subunit 5b-2, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6606780.1 Cytochrome c oxidase subunit 5b-2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036493.1 Cytochrome c oxidase subunit 5b-2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 325.5 bits (833), Expect = 2.9e-85
Identity = 160/175 (91.43%), Postives = 165/175 (94.29%), Query Frame = 0


Query: 1   MWRRLLSSQLKSLKSLPSSSPPASAPLGCVSTATRLAASSHVSPSPSVSLFARHYASDSA 60
           MWRRLLSSQLK+LKSLPSSS  ASAPLGC+S ATRLAASS VS SPSVSLFARHYASDSA
Sbjct: 1   MWRRLLSSQLKALKSLPSSSTSASAPLGCISQATRLAASSRVSHSPSVSLFARHYASDSA 60

Query: 61  DTGLKKKVEDVMPIATGHEREELEASLEGRDILDINHPVGPFGTKEAPAVIQSYYDERLV 120
           DTGLKKK EDV+PI TGHEREELEASLEGRDILDINHPVGPFGTKE PAVI+SYYDERLV
Sbjct: 61  DTGLKKKAEDVIPIVTGHEREELEASLEGRDILDINHPVGPFGTKEEPAVIKSYYDERLV 120

Query: 121 GCPGGEGVEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGYGNDDHHH 176
           GCPGGEG EDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGYG+DDH H
Sbjct: 121 GCPGGEG-EDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGYGDDDHQH 174

[Close]

BLAST of Lag0031341 vs. NCBI nr
Match: XP_022949516.1 (cytochrome c oxidase subunit 5b-2, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 323.2 bits (827), Expect = 1.4e-84
Identity = 159/175 (90.86%), Postives = 164/175 (93.71%), Query Frame = 0


Query: 1   MWRRLLSSQLKSLKSLPSSSPPASAPLGCVSTATRLAASSHVSPSPSVSLFARHYASDSA 60
           MWRRLL SQLK+LKSLPSSS  ASAPLGC+S ATRLAASS VS SPSVSLFARHYASDSA
Sbjct: 1   MWRRLLYSQLKALKSLPSSSTSASAPLGCISQATRLAASSRVSHSPSVSLFARHYASDSA 60

Query: 61  DTGLKKKVEDVMPIATGHEREELEASLEGRDILDINHPVGPFGTKEAPAVIQSYYDERLV 120
           DTGLKKK EDV+PI TGHEREELEASLEGRDILDINHPVGPFGTKE PAVI+SYYDERLV
Sbjct: 61  DTGLKKKAEDVIPIVTGHEREELEASLEGRDILDINHPVGPFGTKEEPAVIKSYYDERLV 120

Query: 121 GCPGGEGVEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGYGNDDHHH 176
           GCPGGEG EDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGYG+DDH H
Sbjct: 121 GCPGGEG-EDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGYGDDDHQH 174

[Close]

BLAST of Lag0031341 vs. ExPASy Swiss-Prot
Match: Q9SSB8 (Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX5B-2 PE=1 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.0e-53
Identity = 108/175 (61.71%), Postives = 133/175 (76.00%), Query Frame = 0


Query: 1   MWRRLLSSQLKSLKSLPSSSPPASAPLGCVSTATRLAASSHVSPSPSV-SLFARHYASDS 60
           MWRR++SS LKS+ ++ S + P+      V  +T L+ S+  S  P+  S+F+R   S +
Sbjct: 1   MWRRIVSSHLKSISAVGSCAAPSCR--HAVVESTHLSLSTRASSIPAYSSIFSRLIGSAA 60

Query: 61  ADTGLKKKVEDVMPIATGHEREELEASLEGRDILDINHPVGPFGTKEAPAVIQSYYDERL 120
           ADT +KK+VEDVMPIATGHE+EEL+A LEGR + DI+ P GPFGTKEAPAV++SYYD R+
Sbjct: 61  ADTAVKKRVEDVMPIATGHEKEELQAELEGRKLDDIDFPEGPFGTKEAPAVVKSYYDMRI 120

Query: 121 VGCPGGEGVEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGYGNDDHH 175
           VGCPGGEG EDEHDVVWF L K    ECPVC+QYF LEVVGPGG PDG+G DDHH
Sbjct: 121 VGCPGGEG-EDEHDVVWFWLEKGKSFECPVCTQYFKLEVVGPGGPPDGHG-DDHH 171

[Close]

BLAST of Lag0031341 vs. ExPASy Swiss-Prot
Match: Q9LW15 (Cytochrome c oxidase subunit 5b-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX5B-1 PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.3e-52
Identity = 106/181 (58.56%), Postives = 134/181 (74.03%), Query Frame = 0


Query: 1   MWRRLLSSQLKSLKSLPSSSPPASAPLGCVSTATR----LAASSHVSPSPSVSLFARHYA 60
           MWRR++SSQLK+L    ++   A++P   ++  TR      A++  + S S  +  R ++
Sbjct: 1   MWRRIVSSQLKTL----AADVVAASPRRSIAATTRPVGFYLAANRSAISASSFVIPRRFS 60

Query: 61  SDSADTGLKKKVEDVMPIATGHEREELEASLEGRDILDINHPVGPFGTKEAPAVIQSYYD 120
           SDS +T   KKVEDVMPIATGHE+EELEA LEGR + DI+ P GPFGTKEAPA+++SYYD
Sbjct: 61  SDSVETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIVKSYYD 120

Query: 121 ERLVGCPGGEGVEDEHDVVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGYG--NDDHH 176
           +R+VGCPGGEG EDEHDVVWF L K    ECPVC+QYF LEVVGPGG PDG+G  +D+HH
Sbjct: 121 KRIVGCPGGEG-EDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDEDDEHH 176

[Close]

BLAST of Lag0031341 vs. ExPASy Swiss-Prot
Match: Q9SSS5 (Putative cytochrome c oxidase subunit 5b-like OS=Arabidopsis thaliana OX=3702 GN=At1g52710 PE=3 SV=2)

HSP 1 Score: 119.4 bits (298), Expect = 4.1e-26
Identity = 57/94 (60.64%), Postives = 67/94 (71.28%), Query Frame = 0


Query: 83  LEASLEGRDILDINHPVGPFGTKEAPAVIQSYYDERLVGCPGGEGVEDEHDVVWFRLRKD 142
           L+    GR +LDI+HP  PFGTKE+PAV+QSY+D+R +GC GGEG ED HDVVWF L K 
Sbjct: 4   LDKEYSGRRLLDIDHPESPFGTKESPAVVQSYFDKRNIGCRGGEG-EDGHDVVWFWLDKG 63

Query: 143 VPHECPVCSQYFVLEVVGPGGSPDGYGND-DHHH 176
              ECPVCSQYF        G PDG+G+D DHHH
Sbjct: 64  KSFECPVCSQYF------EHGPPDGHGDDEDHHH 90

[Close]

BLAST of Lag0031341 vs. ExPASy Swiss-Prot
Match: P04037 (Cytochrome c oxidase subunit 4, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=COX4 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-07
Identity = 36/102 (35.29%), Postives = 47/102 (46.08%), Query Frame = 0


Query: 76  TGHEREELEASLEGRDILDINHPVGPF--GTKEAPAVIQSYYDERLVGCPGGEGVEDEHD 135
           TG  R EL   LEG D+ D   P+     GT + P +I+SY D R VGC G       H 
Sbjct: 64  TGLARLELLGKLEGIDVFD-TKPLDSSRKGTMKDPIIIESYDDYRYVGCTGSPA--GSHT 123

Query: 136 VVWFRLRKDVPHECPVCSQYFVLEVVGPGGSPDGYGNDDHHH 176
           ++W +   +    C  C   + L       +P G  NDDHHH
Sbjct: 124 IMWLKPTVNEVARCWECGSVYKL-------NPVGVPNDDHHH 155

[Close]

BLAST of Lag0031341 vs. ExPASy Swiss-Prot
Match: P29505 (Cytochrome c oxidase subunit 5 OS=Dictyostelium discoideum OX=44689 GN=cxeA PE=1 SV=3)

HSP 1 Score: 57.0 bits (136), Expect = 2.5e-07
Identity = 25/72 (34.72%), Postives = 41/72 (56.94%), Query Frame = 0


Query: 94  DINHPV--GPFGTKEAPAVIQSYYDERLVGCPGGEGVEDEHDVVWFRLRKDVPHECPVCS 153
           D  H V  G FGT ++P +++S +  R+V C GG+G  +EHD+++  + +  P  C  C 
Sbjct: 46  DFGHEVLTGAFGTLKSPVIVESIFHSRIVACEGGDG--EEHDILFHTVAEKKPTICLDCG 105

Query: 154 QYFVLEVVGPGG 164
           Q F L+ +   G
Sbjct: 106 QVFKLKHISSEG 115

The following BLAST results are available for this feature:

BLAST of Lag0031341 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896495.1	9.8e-86	91.43	cytochrome c oxidase subunit 5b-2, mitochondrial-like [Benincasa hispida]	[more]
KAA0038130.1	1.3e-85	90.29	cytochrome c oxidase subunit 5b-2 [Cucumis melo var. makuwa] >TYK20477.1 cytochr...	[more]
XP_022998035.1	2.9e-85	91.43	cytochrome c oxidase subunit 5b-2, mitochondrial-like [Cucurbita maxima]	[more]
XP_023523890.1	2.9e-85	91.43	cytochrome c oxidase subunit 5b-2, mitochondrial-like [Cucurbita pepo subsp. pep...	[more]
XP_022949516.1	1.4e-84	90.86	cytochrome c oxidase subunit 5b-2, mitochondrial-like [Cucurbita moschata]	[more]

BLAST of Lag0031341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SSB8	3.0e-53	61.71	Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q9LW15	4.3e-52	58.56	Cytochrome c oxidase subunit 5b-1, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q9SSS5	4.1e-26	60.64	Putative cytochrome c oxidase subunit 5b-like OS=Arabidopsis thaliana OX=3702 GN...	[more]
P04037	1.5e-07	35.29	Cytochrome c oxidase subunit 4, mitochondrial OS=Saccharomyces cerevisiae (strai...	[more]
P29505	2.5e-07	34.72	Cytochrome c oxidase subunit 5 OS=Dictyostelium discoideum OX=44689 GN=cxeA PE=1...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002124	Cytochrome c oxidase, subunit Vb	PFAM	PF01215	COX5B	coord: 75..162 e-value: 1.5E-16 score: 60.2
IPR002124	Cytochrome c oxidase, subunit Vb	PANTHER	PTHR10122	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	coord: 1..175
IPR002124	Cytochrome c oxidase, subunit Vb	PROSITE	PS51359	COX5B_2	coord: 63..163 score: 20.992958
IPR002124	Cytochrome c oxidase, subunit Vb	CDD	cd00924	Cyt_c_Oxidase_Vb	coord: 64..161 e-value: 4.12125E-36 score: 119.326
IPR036972	Cytochrome c oxidase, subunit Vb superfamily	GENE3D	2.60.11.10	Cytochrome c oxidase, subunit Vb	coord: 64..159 e-value: 4.1E-29 score: 102.4
None	No IPR available	PANTHER	PTHR10122:SF16	SUBFAMILY NOT NAMED	coord: 1..175
None	No IPR available	SUPERFAMILY	57802	Rubredoxin-like	coord: 65..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0031341.1	Lag0031341.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen
cellular_component	GO:0005751	mitochondrial respiratory chain complex IV
cellular_component	GO:0005740	mitochondrial envelope