Lag0031339 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0031339
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptioncytochrome c oxidase subunit 5b-1, mitochondrial-like
Locationchr11: 7198913 .. 7203326 (-)
RNA-Seq ExpressionLag0031339
SyntenyLag0031339
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAGGAGATTGCTCTCTTCGCAGCTCAAATCCCTAAAACCTCTTCCTTCTTCATCCACCGCAGCATCTGCTCCCTCGCGATCCATTTCCGGAGCCTCACGACTTGCCCTTCCTTCTTCATCTCACGTTTCTCCCTCGCCTCCCGTTTCGCTCTTCCCTCGCCATTACGGCGCCGAGGCCGGTAGATCCTACTCTCCGCTTTCCATTTTCATACTCATAACTCATGGATTATTACTTTTTGTACTGTTTGTTTCAAAATGAATCTGTAGTATGAGTGCGGACGTGGATTTGGTCTCGTGTGATTATTGATTTGGTTTTTGTTGTAAATTAGTTGATGCTGGCTTGAAGAAGGTTGAGGATGTAATGCCGATTGCAACCGGACACGAGCGTGAAGAGCTTGAAGCCGCGCTTGAGGTTATATTTATTGTTTTTTGTTGCGTGCTTTCGTTTTTCGATTTTGATGTTGAAAAAAAAAAAAAAACAGCGGAATAGAAGCTGAAAAGAGGCAAGTAAAAGATGGTTTCCATCAATTTCATGGAAATGTCAATGTCGAACTTCTACGTATATCTTGTTATTTATATTAGTCGACGGTCGATTTATCGAACAAATTAATTTCTGCTGTTCCTTGAATTGGTTGAAGAAACGATCTAGGACATTTCGTGACGAAAAGAATTTTATGTATGAGGCCCGATGATGTGAGCTCATTTCTATTTCAAATATGTAGATAGATTTTAGAGAGGTATAGGTGTAATAATCAACGAATAAAAGAAGCAGCCTACAACCAATGTACACGTGTGCTGAAAGGTACAACAGAATGATTGAGCAATCATTACAATGCACAAGCTGAGCCAACAACCTTCTGGGTCTGTTTGGCTAAAGGTTCTGGAATGATAGGTGCCAAACGACACAACATTGTCCAGTCAAGATGTCGTATTTTGTGGGCTACTTGAATTTCTTGACACATTTCTCATGTTAGACCAAGTCTGGTTTATGTAAATATTTTCGTTGGTTTGCATCTGATGTATTTCTCATTCTGGAGGCAAGTCTCATTTCAATTGGTTTTATGTTTGCAGGGAAGAGACATCCTTGATATAAACAACCCTGTTGGCCCTTTTGGCACTAAGGTTGGTATAGTTTGCAGTTAATTTTATTTTCGCACACTTTGGGTTGTGTCTTATGCCGCTCAAGTAGGCCCTTTTGCTTCCTCTCTCCATACTCCATATTGATGTGTTATTTGTTATAAATAAAGCAACATGAGATGGTGAATTATACTTTTCATGTTGTGTATGCGTGTGTTTACCCATAATTTATGTGCCAAATTATTGTTAGAGTCTGAGGGCTTTTGGGTTACTCAAAAAGGTAAGCATGCTCTCTTTAGTTTGGATTATATCTGGAAGAAGATTGACTGATAAAAGATTGAACTTTTGGATGTATTCAGTTCCAACTATTTGTTTGGCAATTTGGTAAGAAAGAAATAGCGTTATTTTCTAAGACAAATTTATTGCTTGAGTTTTTGGGTATTAGTCTTATTTTTCACTTTATGTTTGTCTAAGAATATACTAATTTGGCCGACTTGAGCATAGTGCAACTTACATAAAAGCTGGTACTAAATGACCAAGAGGTTTGTGGTTCAAATCCCTCATCCCACACATGTTGTAAAATATACATACATATATATATATATACTAATGTGTGGTCTCACTAGTTGGGGAGGAACTAGAACTATGTTTAGCTCTTTTTTACTATAGATGGTCTATCTTTTTTTATTTTTATTAGAAACAAATTTCATTGATAAAAAAATATACAGGAGTTTCCAAAAGGTTCCCCGGTTTTGCTATGATTGAAGATAAGGGGTAGTTACAAAGAAAAAACTTTTATCATAAGAGGCTCAAGAAGAAGCCGCAAATATCTCAAGGTCCGATTCTTTTTCTACAAGACTCCAATTTTGGAAACTGTACTGCTTCTTTCCAACCACACCTTCCAAAAGAAATGGGAAAATACCATTATTCTGTAGGTTTCTTTCCTTATCTAGGATCTTTGACCTGTTGACATTTGAGGAATAAAATCCTTAATTACCCAAAGCCTCTTAGAGAAATGGCTGTTCAATAAAACTTGTTCAGCAGGATCTTCATTCTTTTTATGTAAAATAGGTGTTTCGGGAAAAATATAGGGGAGAGTTCTTTGAGCAACACCATTTGTGTTGATCCTTTTTGGAAAATTGACCAAGGGAACACCTTGCACTTTTTAGATAGCTTGCTGTACGAAATATTTTGTATAAATCCAGGAGAATGGAGGTTCTTCAAAAACCAAAATGAGTTGGGAAGGTAACTGAAAAGGAACCGGAAGAAGTGAGATTTCAAGCTCTTGAAGCCTGGTTAAGGAGACGTGAATTGCATCTAACCCACTACCAAGGATAGCTCGCTCTTCAATTTCTCTACCTGTCATTCTTATTTGAACAGAAACTTCAGACCAAGGTCACCCTTACCCCACAAGTTTTGCCAGTGCTCCTTTCCAGTCAGCAACCTCATATGGCCATCTAAACTTCTCACTGAAAGTATAGGAACTTCCTTTGTGAATTGACCAGTGAAGTCACTACCATATTTGCGAGCAACCACCTTAGCCTGAAAGAAAACTATGTGCCCTAGGCCCCTAGTAATATTCCTTTGTGAATTGCCTGGTGAAGTTCTTTCCATGTTTGTTAGCAATTACTATAATGCCGAAGAGAACTAGGCTCCTAGTCCTTAGGAAGTCTCCATAACCATTTGCAAAGAAGAACAAACCATATTCCATGTTTGGTATTCCAAATGCTTAGATCTCTGTTCTCAAGTGGGAGAGAGACCACAGACCATATTGCATCTAACAAGGTGAAAAATTAAAGAAAGGAAGTGTAAGGGGAAGTTGGAAAAAAATTCTCATTTTCTTGATTAGAGTATATCCTCTTGCTGCCACCTAAGCAAGAATTTTTACTGCAGTAGTTTCCATTTTATTTATTTATTTTGAAATTATGTCATTTCTGTTTTGTTTGTAGCTGGGTGTTTATTTGCATTCTGTGACCTTGAATGTTAATACTTCTATTGAGGGTTTACTTTGCTCCAATAAAGCCGGTAACTTTCTTAGCGATATACTGTGAGAGGATTTGCATGAAGGAATAAGTTTAGTTGCATGAATTATTTCCTTGGATGAAATCTAAGTACTTTCTTATTTCTTTAGGAAGCTCCTGCTGTTATTAAGTCATATTATGATGAAAGATTAGTTGGGTGCCCTGGAGGTGAAGGCGGTGGGTACTTGCAATCTCTCTTTTTTTATCCATGCTCATCATTTTTATGCAAGTCTGTCAAAATTTTACATCAGTAAATCTTGCGTTCTTCCTTTACACATGAGGAATTCCAACTTACTGCTGTTGCTTCCTTTCAACTTGTAGAGGATGAACATGATGTTGTCTGGTTTCGGCTGAAGAAAGGCGAGCCACATGAATGCCCTGTGTGCACACAGTACTTTATGGTGAGAATTTATTGTAAATTATTACGTTATGTTGCCTTGATATAGTATGCTGGAAATGAACTTAAAAGAAAAAAACTAAATTTCAACGATAGAATAAAATATCATAAAAGAGGAACAAACCCCAAAACCTTACCAAAGATTACAAGCTGTTATTATGGGTGTTTATGCATGCCCAACTCGAGCATAGTTCAAATTAGTTAGGACATTATACTTCGACCATAATGTTGGAGGTTCGAATTTTTATCTCATATGTTGAATGAGAAAAAAAAAAGTTCTTTATGCTTGATAAATTATATATACGTATATTTAATTACAAAAAGAATTACTTCTGTTCCTCCTTGCAAATGTGAGGTTCATGGTGGGTCAATTGCGTTCTGGTTATTATTTGAATGCATGATTCTATGGAGTCCCAGTGAGTTTTACTGTTAGTTCTCTCTCTCAGGGTCCGTTTGGTAACGCTCTTGTTTCTTGTTTCCGTTTCTTCATTTTTATTAAAGAAAAATAGAATTTCATGATCCTAACACCTATACATTCAATAATAATAAACCTATATTCTTGTTGATGTTTGGAAAAAATTGGAAACAAGAACAAAAAAGGAGAAATTAGTTTTAGTTGTTCCCAAAAGTTCTATACAAATTTTGGGAGTGTTTCTAAAAAATGAGAAACAAGAAACATGCATAGTTATTAAATGCTTAGATTTCTTAATAAAATTAGAAACAAGAAACGAGAACGTTACCAAACGGGTCCTAATTATCTCACTCCTTGAATGGGATAAAGGCATTGGTGTCTTAATTAGCAATTACTTAGAAGTGCCGAATGTTTATAATTATGTAAATTATGTTCGCAGCTGGAAGTGGTGGGACCTGGAGGATCGCCGGATGGTTATGGAGATGATGATCACCATCATTGA

mRNA sequence

ATGTGGAGGAGATTGCTCTCTTCGCAGCTCAAATCCCTAAAACCTCTTCCTTCTTCATCCACCGCAGCATCTGCTCCCTCGCGATCCATTTCCGGAGCCTCACGACTTGCCCTTCCTTCTTCATCTCACGTTTCTCCCTCGCCTCCCGTTTCGCTCTTCCCTCGCCATTACGGCGCCGAGGCCGTTGATGCTGGCTTGAAGAAGGTTGAGGATGTAATGCCGATTGCAACCGGACACGAGCGTGAAGAGCTTGAAGCCGCGCTTGAGGGAAGAGACATCCTTGATATAAACAACCCTGTTGGCCCTTTTGGCACTAAGGAAGCTCCTGCTGTTATTAAGTCATATTATGATGAAAGATTAGTTGGGTGCCCTGGAGGTGAAGGCGAGGATGAACATGATGTTGTCTGGTTTCGGCTGAAGAAAGGCGAGCCACATGAATGCCCTGTGTGCACACAGTACTTTATGCTGGAAGTGGTGGGACCTGGAGGATCGCCGGATGGTTATGGAGATGATGATCACCATCATTGA

Coding sequence (CDS)

ATGTGGAGGAGATTGCTCTCTTCGCAGCTCAAATCCCTAAAACCTCTTCCTTCTTCATCCACCGCAGCATCTGCTCCCTCGCGATCCATTTCCGGAGCCTCACGACTTGCCCTTCCTTCTTCATCTCACGTTTCTCCCTCGCCTCCCGTTTCGCTCTTCCCTCGCCATTACGGCGCCGAGGCCGTTGATGCTGGCTTGAAGAAGGTTGAGGATGTAATGCCGATTGCAACCGGACACGAGCGTGAAGAGCTTGAAGCCGCGCTTGAGGGAAGAGACATCCTTGATATAAACAACCCTGTTGGCCCTTTTGGCACTAAGGAAGCTCCTGCTGTTATTAAGTCATATTATGATGAAAGATTAGTTGGGTGCCCTGGAGGTGAAGGCGAGGATGAACATGATGTTGTCTGGTTTCGGCTGAAGAAAGGCGAGCCACATGAATGCCCTGTGTGCACACAGTACTTTATGCTGGAAGTGGTGGGACCTGGAGGATCGCCGGATGGTTATGGAGATGATGATCACCATCATTGA

Protein sequence

MWRRLLSSQLKSLKPLPSSSTAASAPSRSISGASRLALPSSSHVSPSPPVSLFPRHYGAEAVDAGLKKVEDVMPIATGHEREELEAALEGRDILDINNPVGPFGTKEAPAVIKSYYDERLVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFMLEVVGPGGSPDGYGDDDHHH
Homology
[Close]
BLAST of Lag0031339 vs. NCBI nr
Match: XP_038878141.1 (cytochrome c oxidase subunit 5b-1, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 306.6 bits (784), Expect = 1.4e-79
Identity = 156/177 (88.14%), Postives = 163/177 (92.09%), Query Frame = 0 

Query: 1   MWRRLLSSQLKSLKPLPSSSTAASAPSRSISGASRLALPSSSHVSPSPPVSLFPRHYGAE 60
           MWRRLLS QL +LK LPSSST   APS SIS ASRLA+ +SS+VSPSP +SLF RH+ AE
Sbjct: 1   MWRRLLSLQLNALKRLPSSST---APSVSISTASRLAVAASSYVSPSPYISLFARHFSAE 60

Query: 61  -AVDAGLKK-VEDVMPIATGHEREELEAALEGRDILDINNPVGPFGTKEAPAVIKSYYDE 120
            AVDAGLKK VEDVMPIATGHEREELEAALEGRDILDINNPVGPFGTKEAPAVIKSYYDE
Sbjct: 61  AAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDINNPVGPFGTKEAPAVIKSYYDE 120

Query: 121 RLVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFMLEVVGPGGSPDGYGDDDHHH 176
           RLVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYF+LEVVGPGGSPDGYGDDDHHH
Sbjct: 121 RLVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFVLEVVGPGGSPDGYGDDDHHH 174

[Close]
BLAST of Lag0031339 vs. NCBI nr
Match: XP_022153669.1 (cytochrome c oxidase subunit 5b-2, mitochondrial-like [Momordica charantia])

HSP 1 Score: 302.0 bits (772), Expect = 3.4e-78
Identity = 152/176 (86.36%), Postives = 158/176 (89.77%), Query Frame = 0 

Query: 1   MWRRLLSSQLKSLKPLPSSSTAASAPSRSISGASRLALPSSSHVSPSPPVSLFPRHYGAE 60
           MWRRLLSS LKSLKP  SSSTA S PS SIS A+R   P+SSHVS SP VSLF RHYGAE
Sbjct: 1   MWRRLLSSHLKSLKPRTSSSTAPSPPSGSISRAAR--RPASSHVSSSPSVSLFARHYGAE 60

Query: 61  AVDAGL-KKVEDVMPIATGHEREELEAALEGRDILDINNPVGPFGTKEAPAVIKSYYDER 120
           A  AGL KKV DVMPIATGHEREELEAALEGRDILDI++PVGPFGTKEAPAV+KSYYDER
Sbjct: 61  AAGAGLKKKVGDVMPIATGHEREELEAALEGRDILDIDHPVGPFGTKEAPAVVKSYYDER 120

Query: 121 LVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFMLEVVGPGGSPDGYGDDDHHH 176
           LVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYF LEVVGPGGSPDG+GDDDHHH
Sbjct: 121 LVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFALEVVGPGGSPDGFGDDDHHH 174

[Close]
BLAST of Lag0031339 vs. NCBI nr
Match: KAG6606781.1 (Cytochrome c oxidase subunit 5b-2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036494.1 Cytochrome c oxidase subunit 5b-2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301.2 bits (770), Expect = 5.8e-78
Identity = 150/178 (84.27%), Postives = 160/178 (89.89%), Query Frame = 0 

Query: 1   MWRRLLSSQLKSLKPLPSSSTAASAPSRSISGASRLALPSSSHVSPSPPVSLFPRHYGAE 60
           MWR+LL SQL++LK  PS+S AASAP   IS ASRL + +SSHV PSP VS + RHYGAE
Sbjct: 1   MWRKLLFSQLRALKSFPSTSAAASAPLGFISRASRLTVAASSHVFPSPHVSFYARHYGAE 60

Query: 61  AVDAGL-KKVEDVMPIATGHEREELEAALEGRDILDINNPVGPFGTKEAPAVIKSYYDER 120
           AVDAGL KKVEDVMPIATGHEREELEAALEGRDILDI+NPVGPFGTKE PAVIKSYYDER
Sbjct: 61  AVDAGLKKKVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEDPAVIKSYYDER 120

Query: 121 LVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFMLEVVGPGGSPDGYG--DDDHHH 176
           LVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYF+LEVVGPGGSPDG+G  DDDHHH
Sbjct: 121 LVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFVLEVVGPGGSPDGFGNDDDDHHH 178

[Close]
BLAST of Lag0031339 vs. NCBI nr
Match: XP_004152218.1 (cytochrome c oxidase subunit 5b-1, mitochondrial [Cucumis sativus] >KGN52866.1 hypothetical protein Csa_014612 [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 9.8e-78
Identity = 156/179 (87.15%), Postives = 164/179 (91.62%), Query Frame = 0 

Query: 1   MWRRLLSSQLKSLKPLPSSSTAAS-APSRSISGASRLALPSSSHVSPSPPVSLFPRHYGA 60
           MWRRLLS +L +LK LPSSSTAAS APS SIS ASRLA+ +SS VSPSP VSLF RH+ A
Sbjct: 1   MWRRLLSLRLSALKRLPSSSTAASAAPSGSISTASRLAVAASSRVSPSPYVSLFARHFSA 60

Query: 61  E-AVDAGLKK-VEDVMPIATGHEREELEAALEGRDILDINNPVGPFGTKEAPAVIKSYYD 120
           E AVDAGLKK VEDVMPIATGHEREELEAALEGRDILDI+NPVGPFGTKEAPAVIKSYYD
Sbjct: 61  EAAVDAGLKKNVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEAPAVIKSYYD 120

Query: 121 ERLVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFMLEVVGPGGSPDGYG-DDDHHH 176
           ER+VGCPGGEG+DEHDVVWFRLKKGEPHECPVCTQYF LEVVGPGGSPDGYG DDDHHH
Sbjct: 121 ERIVGCPGGEGDDEHDVVWFRLKKGEPHECPVCTQYFTLEVVGPGGSPDGYGNDDDHHH 179

[Close]
BLAST of Lag0031339 vs. NCBI nr
Match: XP_022998034.1 (cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 300.1 bits (767), Expect = 1.3e-77
Identity = 149/177 (84.18%), Postives = 158/177 (89.27%), Query Frame = 0 

Query: 1   MWRRLLSSQLKSLKPLPSSSTAASAPSRSISGASRLALPSSSHVSPSPPVSLFPRHYGAE 60
           MWR+LL SQL++LK  PS+S AASAP   IS ASRL + +SSHV PSP VS + RHYG E
Sbjct: 1   MWRKLLFSQLRALKSFPSTSAAASAPLGFISRASRLTVAASSHVFPSPHVSFYARHYGVE 60

Query: 61  AVDAGL-KKVEDVMPIATGHEREELEAALEGRDILDINNPVGPFGTKEAPAVIKSYYDER 120
           A DAGL KKVEDVMPIATGHEREELEAALEGRDILDI+NPVGPFGTKE PAVIKSYYDER
Sbjct: 61  AADAGLKKKVEDVMPIATGHEREELEAALEGRDILDIDNPVGPFGTKEDPAVIKSYYDER 120

Query: 121 LVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFMLEVVGPGGSPDGYG-DDDHHH 176
           LVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYF+LEVVGPGGSPDGYG DDDHHH
Sbjct: 121 LVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFVLEVVGPGGSPDGYGNDDDHHH 177

[Close]
BLAST of Lag0031339 vs. ExPASy Swiss-Prot
Match: Q9LW15 (Cytochrome c oxidase subunit 5b-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX5B-1 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-54
Identity = 111/182 (60.99%), Postives = 138/182 (75.82%), Query Frame = 0 

Query: 1   MWRRLLSSQLKSLKPLPSSSTAASAPSRSISGASR----LALPSSSHVSPSPPVSLFPRH 60
           MWRR++SSQLK+L    ++   A++P RSI+  +R        + S +S S  V   PR 
Sbjct: 1   MWRRIVSSQLKTL----AADVVAASPRRSIAATTRPVGFYLAANRSAISASSFV--IPRR 60

Query: 61  YGAEAVDA-GLKKVEDVMPIATGHEREELEAALEGRDILDINNPVGPFGTKEAPAVIKSY 120
           + +++V+    KKVEDVMPIATGHE+EELEA LEGR + DI+ P GPFGTKEAPA++KSY
Sbjct: 61  FSSDSVETPATKKVEDVMPIATGHEKEELEAELEGRRLDDIDFPEGPFGTKEAPAIVKSY 120

Query: 121 YDERLVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFMLEVVGPGGSPDGYG--DDDH 176
           YD+R+VGCPGGEGEDEHDVVWF L+KG+  ECPVCTQYF LEVVGPGG PDG+G  DD+H
Sbjct: 121 YDKRIVGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFELEVVGPGGPPDGHGDEDDEH 176

[Close]
BLAST of Lag0031339 vs. ExPASy Swiss-Prot
Match: Q9SSB8 (Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=COX5B-2 PE=1 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 5.1e-53
Identity = 107/174 (61.49%), Postives = 132/174 (75.86%), Query Frame = 0 

Query: 1   MWRRLLSSQLKSLKPLPSSSTAASAPSRSISGASRLALPSSSHVSPSPPVSLFPRHYGAE 60
           MWRR++SS LKS+  +   S AA +   ++  ++ L+L + +   P+   S+F R  G+ 
Sbjct: 1   MWRRIVSSHLKSISAV--GSCAAPSCRHAVVESTHLSLSTRASSIPAYS-SIFSRLIGSA 60

Query: 61  AVDAGLKK-VEDVMPIATGHEREELEAALEGRDILDINNPVGPFGTKEAPAVIKSYYDER 120
           A D  +KK VEDVMPIATGHE+EEL+A LEGR + DI+ P GPFGTKEAPAV+KSYYD R
Sbjct: 61  AADTAVKKRVEDVMPIATGHEKEELQAELEGRKLDDIDFPEGPFGTKEAPAVVKSYYDMR 120

Query: 121 LVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFMLEVVGPGGSPDGYGDDDH 174
           +VGCPGGEGEDEHDVVWF L+KG+  ECPVCTQYF LEVVGPGG PDG+GDD H
Sbjct: 121 IVGCPGGEGEDEHDVVWFWLEKGKSFECPVCTQYFKLEVVGPGGPPDGHGDDHH 171

[Close]
BLAST of Lag0031339 vs. ExPASy Swiss-Prot
Match: Q9SSS5 (Putative cytochrome c oxidase subunit 5b-like OS=Arabidopsis thaliana OX=3702 GN=At1g52710 PE=3 SV=2)

HSP 1 Score: 123.6 bits (309), Expect = 2.2e-27
Identity = 56/93 (60.22%), Postives = 69/93 (74.19%), Query Frame = 0 

Query: 84  LEAALEGRDILDINNPVGPFGTKEAPAVIKSYYDERLVGCPGGEGEDEHDVVWFRLKKGE 143
           L+    GR +LDI++P  PFGTKE+PAV++SY+D+R +GC GGEGED HDVVWF L KG+
Sbjct: 4   LDKEYSGRRLLDIDHPESPFGTKESPAVVQSYFDKRNIGCRGGEGEDGHDVVWFWLDKGK 63

Query: 144 PHECPVCTQYFMLEVVGPGGSPDGYGDD-DHHH 176
             ECPVC+QYF        G PDG+GDD DHHH
Sbjct: 64  SFECPVCSQYF------EHGPPDGHGDDEDHHH 90

[Close]
BLAST of Lag0031339 vs. ExPASy Swiss-Prot
Match: P29505 (Cytochrome c oxidase subunit 5 OS=Dictyostelium discoideum OX=44689 GN=cxeA PE=1 SV=3)

HSP 1 Score: 56.2 bits (134), Expect = 4.2e-07
Identity = 23/63 (36.51%), Postives = 39/63 (61.90%), Query Frame = 0 

Query: 101 GPFGTKEAPAVIKSYYDERLVGCPGGEGEDEHDVVWFRLKKGEPHECPVCTQYFMLEVVG 160
           G FGT ++P +++S +  R+V C GG+GE EHD+++  + + +P  C  C Q F L+ + 
Sbjct: 54  GAFGTLKSPVIVESIFHSRIVACEGGDGE-EHDILFHTVAEKKPTICLDCGQVFKLKHIS 113

Query: 161 PGG 164
             G
Sbjct: 114 SEG 115

[Close]
BLAST of Lag0031339 vs. ExPASy Swiss-Prot
Match: P79010 (Cytochrome c oxidase subunit 4, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cox4 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.6e-06
Identity = 28/86 (32.56%), Postives = 41/86 (47.67%), Query Frame = 0 

Query: 76  ATGHEREELEAALEGRDILDINN-PVGPFGTKEAPAVIKSYYDERLVGCPGGEGEDEHDV 135
           ATG ER EL + L GRD  D+        GT   P ++ S    R +GC G      H++
Sbjct: 72  ATGLERYELLSELSGRDAFDMKPLDASRKGTLTDPIMVTSLDPYRHIGCTGSP-SGSHNL 131

Query: 136 VWFRLKKGEPHECPVCTQYFMLEVVG 161
           +W  + K +   CP C   + L+ +G
Sbjct: 132 IWMTVYKDKLRRCPECGSVYKLKFMG 156

The following BLAST results are available for this feature:
BLAST of Lag0031339 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038878141.11.4e-7988.14cytochrome c oxidase subunit 5b-1, mitochondrial-like [Benincasa hispida][more]
XP_022153669.13.4e-7886.36cytochrome c oxidase subunit 5b-2, mitochondrial-like [Momordica charantia][more]
KAG6606781.15.8e-7884.27Cytochrome c oxidase subunit 5b-2, mitochondrial, partial [Cucurbita argyrosperm... [more]
XP_004152218.19.8e-7887.15cytochrome c oxidase subunit 5b-1, mitochondrial [Cucumis sativus] >KGN52866.1 h... [more]
XP_022998034.11.3e-7784.18cytochrome c oxidase subunit 5b-1, mitochondrial-like [Cucurbita maxima][more]
BLAST of Lag0031339 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LW151.6e-5460.99Cytochrome c oxidase subunit 5b-1, mitochondrial OS=Arabidopsis thaliana OX=3702... [more]
Q9SSB85.1e-5361.49Cytochrome c oxidase subunit 5b-2, mitochondrial OS=Arabidopsis thaliana OX=3702... [more]
Q9SSS52.2e-2760.22Putative cytochrome c oxidase subunit 5b-like OS=Arabidopsis thaliana OX=3702 GN... [more]
P295054.2e-0736.51Cytochrome c oxidase subunit 5 OS=Dictyostelium discoideum OX=44689 GN=cxeA PE=1... [more]
P790103.6e-0632.56Cytochrome c oxidase subunit 4, mitochondrial OS=Schizosaccharomyces pombe (stra... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036972Cytochrome c oxidase, subunit Vb superfamilyGENE3D2.60.11.10Cytochrome c oxidase, subunit Vbcoord: 66..159
e-value: 1.5E-30
score: 107.0
IPR002124Cytochrome c oxidase, subunit VbPFAMPF01215COX5Bcoord: 76..162
e-value: 6.3E-18
score: 64.7
IPR002124Cytochrome c oxidase, subunit VbPANTHERPTHR10122CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIALcoord: 1..175
IPR002124Cytochrome c oxidase, subunit VbPROSITEPS51359COX5B_2coord: 64..163
score: 22.01239
IPR002124Cytochrome c oxidase, subunit VbCDDcd00924Cyt_c_Oxidase_Vbcoord: 64..161
e-value: 1.27295E-31
score: 107.77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..48
NoneNo IPR availablePANTHERPTHR10122:SF16SUBFAMILY NOT NAMEDcoord: 1..175
NoneNo IPR availableSUPERFAMILY57802Rubredoxin-likecoord: 68..162

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0031339.1Lag0031339.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
cellular_component GO:0005751 mitochondrial respiratory chain complex IV
cellular_component GO:0005740 mitochondrial envelope