Lag0031325 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0031325
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr11: 7085228 .. 7086430 (+)
RNA-Seq Expression	Lag0031325
Synteny	Lag0031325

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTCTCTGCGACCCATTCGCAGATTCTGCCACGCTGCTACCGTCATTGTATCTACAGAGACTCCTGCGGCTGTATTGAATCAAGTTCAGAGCTCGAAACCTGTGGAGGAACCTGCCCTTGTAAAGCTTAAAGCAGAACGGGACCCCGAAAAGCTGTTCCATCTGTTTAAAGCCAATGCGCACAATCGGCTTGTGATTGAGAATCGATTTGCGTTTGAAGACACTGTGTCTCGACTGGCTGGAGCTCGTCGCTTCGATTACATTGAGCATTTGCTTGAGCATCAGAAGACGCTTCCACAGGGACGCCGTGAAGGATTCATTATAAGAATCATAATGTTATATGGTAAGGCTGAGATGATCAAGCATGCTGTTGATACTTTTTATGATATGCACTTATATGGGTGCCGTAGGACTGTTAAGTCTTTTAATGCTGTGCTTAAGGTTTTGATGAAGACCCGTGATTTAGGAGCCCTCGAGACATTTTTAAGAGAAGTTCCTGAAAAGTTCAATATTGAGTTGGATATTATTTCTGTTAACATTGTTGTTAAGGCCTTTTGTGATATGGGCATTTTAGATAGAGCTTATCTTCTCATGTTAGAGATGGAGAAGTTGGGAATAAGACCAGATGTGGTTACATATACAACATTGATTTCGGCACTTTACAAGGATAATCGATGTGAAATTAGTAATGGTTTGTGGAATCTAATGGTTTTGAGGGGTTGCTTGCCTAATCTTGCTTCTTTCAATGTGAGAATTCAATATTTGGTTAACAGGAGACGAGCTTGGGAGGCTAATAAATTGATGAATGTGATGAGGAACATTGGGATTGTACCAGATGAAGTTACTTACAATCTGGTAATAAAAGGTTTTTGCCAAGCTGGGTTTCTTGAAATGGCCAAAAGGGTTTATTCTGCTTTGCATGGGAGTGGATATAAACCAAATGTCAAAATTTATCAAACCATGATTCATTACCTGTGCAGAAGTGGGGACTTCAACCTGGCATATACAATGTGCAAAGATGCCATGAACAAGAATTGGTTTCCAAACATTGATACAATTCATTCATTACTTAAAGGCCTCAAGAAGATGGGGCAGCCTGGTAAGGCTCAATTGATCCTAACATTGGCTAGGAAAAGGGTACCTCCTTTCTCTACAGCTCAGTTGGAAGCTTTGAATACCACACTACTGGCCAATAGCTGA

mRNA sequence

ATGCTCTCTCTGCGACCCATTCGCAGATTCTGCCACGCTGCTACCGTCATTGTATCTACAGAGACTCCTGCGGCTGTATTGAATCAAGTTCAGAGCTCGAAACCTGTGGAGGAACCTGCCCTTGTAAAGCTTAAAGCAGAACGGGACCCCGAAAAGCTGTTCCATCTGTTTAAAGCCAATGCGCACAATCGGCTTGTGATTGAGAATCGATTTGCGTTTGAAGACACTGTGTCTCGACTGGCTGGAGCTCGTCGCTTCGATTACATTGAGCATTTGCTTGAGCATCAGAAGACGCTTCCACAGGGACGCCGTGAAGGATTCATTATAAGAATCATAATGTTATATGGTAAGGCTGAGATGATCAAGCATGCTGTTGATACTTTTTATGATATGCACTTATATGGGTGCCGTAGGACTGTTAAGTCTTTTAATGCTGTGCTTAAGGTTTTGATGAAGACCCGTGATTTAGGAGCCCTCGAGACATTTTTAAGAGAAGTTCCTGAAAAGTTCAATATTGAGTTGGATATTATTTCTGTTAACATTGTTGTTAAGGCCTTTTGTGATATGGGCATTTTAGATAGAGCTTATCTTCTCATGTTAGAGATGGAGAAGTTGGGAATAAGACCAGATGTGGTTACATATACAACATTGATTTCGGCACTTTACAAGGATAATCGATGTGAAATTAGTAATGGTTTGTGGAATCTAATGGTTTTGAGGGGTTGCTTGCCTAATCTTGCTTCTTTCAATGTGAGAATTCAATATTTGGTTAACAGGAGACGAGCTTGGGAGGCTAATAAATTGATGAATGTGATGAGGAACATTGGGATTGTACCAGATGAAGTTACTTACAATCTGGTAATAAAAGGTTTTTGCCAAGCTGGGTTTCTTGAAATGGCCAAAAGGGTTTATTCTGCTTTGCATGGGAGTGGATATAAACCAAATGTCAAAATTTATCAAACCATGATTCATTACCTGTGCAGAAGTGGGGACTTCAACCTGGCATATACAATGTGCAAAGATGCCATGAACAAGAATTGGTTTCCAAACATTGATACAATTCATTCATTACTTAAAGGCCTCAAGAAGATGGGGCAGCCTGGTAAGGCTCAATTGATCCTAACATTGGCTAGGAAAAGGGTACCTCCTTTCTCTACAGCTCAGTTGGAAGCTTTGAATACCACACTACTGGCCAATAGCTGA

Coding sequence (CDS)

ATGCTCTCTCTGCGACCCATTCGCAGATTCTGCCACGCTGCTACCGTCATTGTATCTACAGAGACTCCTGCGGCTGTATTGAATCAAGTTCAGAGCTCGAAACCTGTGGAGGAACCTGCCCTTGTAAAGCTTAAAGCAGAACGGGACCCCGAAAAGCTGTTCCATCTGTTTAAAGCCAATGCGCACAATCGGCTTGTGATTGAGAATCGATTTGCGTTTGAAGACACTGTGTCTCGACTGGCTGGAGCTCGTCGCTTCGATTACATTGAGCATTTGCTTGAGCATCAGAAGACGCTTCCACAGGGACGCCGTGAAGGATTCATTATAAGAATCATAATGTTATATGGTAAGGCTGAGATGATCAAGCATGCTGTTGATACTTTTTATGATATGCACTTATATGGGTGCCGTAGGACTGTTAAGTCTTTTAATGCTGTGCTTAAGGTTTTGATGAAGACCCGTGATTTAGGAGCCCTCGAGACATTTTTAAGAGAAGTTCCTGAAAAGTTCAATATTGAGTTGGATATTATTTCTGTTAACATTGTTGTTAAGGCCTTTTGTGATATGGGCATTTTAGATAGAGCTTATCTTCTCATGTTAGAGATGGAGAAGTTGGGAATAAGACCAGATGTGGTTACATATACAACATTGATTTCGGCACTTTACAAGGATAATCGATGTGAAATTAGTAATGGTTTGTGGAATCTAATGGTTTTGAGGGGTTGCTTGCCTAATCTTGCTTCTTTCAATGTGAGAATTCAATATTTGGTTAACAGGAGACGAGCTTGGGAGGCTAATAAATTGATGAATGTGATGAGGAACATTGGGATTGTACCAGATGAAGTTACTTACAATCTGGTAATAAAAGGTTTTTGCCAAGCTGGGTTTCTTGAAATGGCCAAAAGGGTTTATTCTGCTTTGCATGGGAGTGGATATAAACCAAATGTCAAAATTTATCAAACCATGATTCATTACCTGTGCAGAAGTGGGGACTTCAACCTGGCATATACAATGTGCAAAGATGCCATGAACAAGAATTGGTTTCCAAACATTGATACAATTCATTCATTACTTAAAGGCCTCAAGAAGATGGGGCAGCCTGGTAAGGCTCAATTGATCCTAACATTGGCTAGGAAAAGGGTACCTCCTTTCTCTACAGCTCAGTTGGAAGCTTTGAATACCACACTACTGGCCAATAGCTGA

Protein sequence

MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALETFLREVPEKFNIELDIISVNIVVKAFCDMGILDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLRGCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMAKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTLLANS

Homology

[Close]

BLAST of Lag0031325 vs. NCBI nr
Match: XP_023527765.1 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023527766.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023527767.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023527768.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023527769.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023527770.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 752.3 bits (1941), Expect = 2.2e-213
Identity = 372/396 (93.94%), Postives = 386/396 (97.47%), Query Frame = 0


Query: 1   MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVIVS+ETPAAVLN VQ+SKPVEEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIVSSETPAAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALETFLREVPEKFNIELDIISVN 180
           IKHAVDTFY+MHLYGC RTVKSFNAVLKVLMK RDLGALE FLRE PEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180

Query: 181 IVVKAFCDMGILDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 240
           IVVKAFCDMGIL+RAYL +LEMEK+GIRPDVVTYTTLISALYK N+CEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDMGILNRAYLFILEMEKVGIRPDVVTYTTLISALYKHNQCEISNGLWNLMVLR 240

Query: 241 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 300
           GCLPNLASFNVRIQYLV+RRRAW+ANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFL+MA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFN+AYTMCKDAM KNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNMAYTMCKDAMTKNWFPNIDTIHSLLKG 360

Query: 361 LKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTL 397
           L KMGQPGKAQLIL+LARKRVPPFST QLEALNTT+
Sbjct: 361 LNKMGQPGKAQLILSLARKRVPPFSTTQLEALNTTM 396

[Close]

BLAST of Lag0031325 vs. NCBI nr
Match: KAG6581920.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 749.6 bits (1934), Expect = 1.4e-212
Identity = 370/396 (93.43%), Postives = 385/396 (97.22%), Query Frame = 0


Query: 1   MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRP RRFCHAATVIVS+ETPAAVLN VQ+SKPVEEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPFRRFCHAATVIVSSETPAAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRII+LYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIVLYGKAEM 120

Query: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALETFLREVPEKFNIELDIISVN 180
           IKHAVDTFY+MHLYGC RTVKSFNAVLKVLMK RDLGALE FLRE PEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180

Query: 181 IVVKAFCDMGILDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 240
           IVVKAFCDMGIL+RAYL +LEMEK+GIRPDVVTYTTLISALYK N+CEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDMGILNRAYLFILEMEKMGIRPDVVTYTTLISALYKHNQCEISNGLWNLMVLR 240

Query: 241 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 300
           GCLPNLASFNVRIQYLV+RRRAW+ANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFL+MA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFN+AYTMCKDAM KNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNMAYTMCKDAMTKNWFPNIDTIHSLLKG 360

Query: 361 LKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTL 397
           L KMGQPGKAQLIL+LARKRVPPFST QLEALNTT+
Sbjct: 361 LNKMGQPGKAQLILSLARKRVPPFSTTQLEALNTTM 396

[Close]

BLAST of Lag0031325 vs. NCBI nr
Match: XP_022956097.1 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita moschata] >XP_022956098.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita moschata] >XP_022956099.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita moschata] >XP_022956100.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 748.8 bits (1932), Expect = 2.4e-212
Identity = 371/399 (92.98%), Postives = 388/399 (97.24%), Query Frame = 0


Query: 1   MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAAT+IVS+ETPAAVLN VQ+SKPVEEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATIIVSSETPAAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRII+LYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIVLYGKAEM 120

Query: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALETFLREVPEKFNIELDIISVN 180
           IKHAVDTFY+MHLYGC RTVKSFNAVLKVLMK RDLGALE FLRE PEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180

Query: 181 IVVKAFCDMGILDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 240
           IVVKAFCDMGIL+RAYL +LEMEK+GIRPDVVTYTTLISALYK N+CEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDMGILNRAYLFILEMEKVGIRPDVVTYTTLISALYKHNQCEISNGLWNLMVLR 240

Query: 241 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 300
           GCLPNLASFNVRIQYLV+RRRAW+ANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFL+MA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFN+AYTMCKDAM KNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNMAYTMCKDAMTKNWFPNIDTIHSLLKG 360

Query: 361 LKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTLLAN 400
           L KMGQPGKAQLIL+LARKRVPPFST QLEALN T++AN
Sbjct: 361 LNKMGQPGKAQLILSLARKRVPPFSTTQLEALN-TIMAN 398

[Close]

BLAST of Lag0031325 vs. NCBI nr
Match: XP_022979497.1 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979498.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979499.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979500.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979501.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima] >XP_022979502.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 748.0 bits (1930), Expect = 4.1e-212
Identity = 371/396 (93.69%), Postives = 385/396 (97.22%), Query Frame = 0


Query: 1   MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVIVSTET  AVLN VQ+SKPVEEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIVSTETSMAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRII+LYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIVLYGKAEM 120

Query: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALETFLREVPEKFNIELDIISVN 180
           IKHAVDTFY+MHLYGC RTVKSFNAVLKVLMK RDLGALE FLRE PEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180

Query: 181 IVVKAFCDMGILDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 240
           IVVKAFCDMGIL+RAYLL+LEMEK+GIRPDVVTYTTLISALYK N+CEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDMGILNRAYLLILEMEKVGIRPDVVTYTTLISALYKYNQCEISNGLWNLMVLR 240

Query: 241 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 300
           GCLPNLASFNVRIQYLV+RRRAW+ANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFL+MA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFN+AYTMCKDAM KNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNMAYTMCKDAMTKNWFPNIDTIHSLLKG 360

Query: 361 LKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTL 397
           L KMGQPGKAQLIL+LARKRVPPFST QLEALNTT+
Sbjct: 361 LNKMGQPGKAQLILSLARKRVPPFSTTQLEALNTTM 396

[Close]

BLAST of Lag0031325 vs. NCBI nr
Match: XP_038901360.1 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Benincasa hispida] >XP_038901371.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Benincasa hispida] >XP_038901381.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Benincasa hispida] >XP_038901390.1 pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Benincasa hispida])

HSP 1 Score: 744.2 bits (1920), Expect = 5.9e-211
Identity = 370/400 (92.50%), Postives = 386/400 (96.50%), Query Frame = 0


Query: 1   MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAAT   ST+T AAVLN VQ+SKP+EEPALVKLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAAT---STDTAAAVLNHVQNSKPLEEPALVKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALETFLREVPEKFNIELDIISVN 180
           IKHA+DTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALE FL E PEKFNIELDIISVN
Sbjct: 121 IKHALDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALEAFLSEAPEKFNIELDIISVN 180

Query: 181 IVVKAFCDMGILDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 240
           IVVKAFCD+GIL+RAYLLM+EMEK+GIRPDVVTYTTLISA YKDNRCEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDLGILNRAYLLMVEMEKVGIRPDVVTYTTLISAFYKDNRCEISNGLWNLMVLR 240

Query: 241 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 300
           GC PN+ASFNVRIQYL++RRRAW+ANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFL+MA
Sbjct: 241 GCFPNVASFNVRIQYLIDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHG+GYKPNVKIYQTM+HYLCRSGDFNLAYTMCKD MNKNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGNGYKPNVKIYQTMLHYLCRSGDFNLAYTMCKDTMNKNWFPNIDTIHSLLKG 360

Query: 361 LKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTLLANS 401
           L KMGQPG+AQ ILTLARKRVPPFSTAQLEALNTT LANS
Sbjct: 361 LNKMGQPGRAQFILTLARKRVPPFSTAQLEALNTT-LANS 396

[Close]

BLAST of Lag0031325 vs. ExPASy Swiss-Prot
Match: Q8GW57 (Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80150 PE=2 SV=2)

HSP 1 Score: 534.6 bits (1376), Expect = 9.3e-151
Identity = 267/402 (66.42%), Postives = 322/402 (80.10%), Query Frame = 0


Query: 1   MLSLRPIRRFCH----AATVI--VSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLF 60
           MLSLR IRRFCH    AAT I  VSTE+     NQ+Q  KP+EEPALVKLK+ERDPEKL+
Sbjct: 1   MLSLRHIRRFCHFPSSAATGIAYVSTES-----NQIQGLKPLEEPALVKLKSERDPEKLY 60

Query: 61  HLFKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIML 120
           +LFKANA NRLVIENRFAFEDTVSRLAGA R D+IE LLEHQKTLPQGRREGFI+RIIML
Sbjct: 61  NLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIML 120

Query: 121 YGKAEMIKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALETFLREVPEKFNIEL 180
           YGKA M K A+DTF++M LYGC+R+VKSFNA L+VL    DL  +  FL + P K+ I++
Sbjct: 121 YGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDI 180

Query: 181 DIISVNIVVKAFCDMGILDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLW 240
           D +S NI +K+FC++GILD AY+ M EMEK G+ PDVVTYTTLISALYK  RC I NGLW
Sbjct: 181 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 240

Query: 241 NLMVLRGCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQA 300
           NLMVL+GC PNL +FNVRIQ+LVNRRRAW+AN L+ +M  + + PD +TYN+VIKGF  A
Sbjct: 241 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 300

Query: 301 GFLEMAKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTI 360
            F +MA+RVY+A+HG GYKPN+KIYQTMIHYLC++G+F+LAYTMCKD M K W+PN+DT+
Sbjct: 301 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 360

Query: 361 HSLLKGLKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTL 397
             LLKGL K GQ  +A+ I+ L  +RVPPF + QL +L + L
Sbjct: 361 EMLLKGLVKKGQLDQAKSIMELVHRRVPPFRSKQLLSLKSIL 397

[Close]

BLAST of Lag0031325 vs. ExPASy Swiss-Prot
Match: Q9M065 (Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g36680 PE=1 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 8.6e-56
Identity = 125/384 (32.55%), Postives = 212/384 (55.21%), Query Frame = 0


Query: 2   LSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLF-KAN 61
           +SLR +RRF  AA       T A    ++  SK     A   L+ E DP+K   ++   +
Sbjct: 6   ISLRLVRRFASAA---ADGTTTAPSSGKISVSK-----AKSTLRKEHDPDKALKIYANVS 65

Query: 62  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 121
            H+   + +R+A E TV RLA  RRF  IE L+E  K  P+ + E F   +I  YG+A M
Sbjct: 66  DHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASM 125

Query: 122 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALETFLREVPEKFN-IELDIISV 181
             HA+ TF  M  YG  R+  SFNA+L   + +++   +     E+P+++N I  D IS 
Sbjct: 126 FNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISY 185

Query: 182 NIVVKAFCDMGILDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVL 241
            I++K++CD G  ++A  +M +M+  G+    + +TT++S+LYK    E+++ LWN MV 
Sbjct: 186 GILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVK 245

Query: 242 RGCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEM 301
           +GC  + A++NVRI     +       +L+  M ++G+ PD ++YN ++  +C+ G L+ 
Sbjct: 246 KGCELDNAAYNVRIM-SAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDE 305

Query: 302 AKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLK 361
           AK+VY  L G+   PN   ++T+I +LC S  +   Y + K ++  +  P+ +T+  L+ 
Sbjct: 306 AKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVV 365

Query: 362 GLKKMGQPGKAQLILTLARKRVPP 384
           GL +  +   A+ ++   +K+ PP
Sbjct: 366 GLVENKKRDDAKGLIRTVKKKFPP 380

[Close]

BLAST of Lag0031325 vs. ExPASy Swiss-Prot
Match: Q8LE47 (Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PPR336 PE=2 SV=2)

HSP 1 Score: 208.4 bits (529), Expect = 1.5e-52
Identity = 116/380 (30.53%), Postives = 213/380 (56.05%), Query Frame = 0


Query: 2   LSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKANA 61
           L+  P  R   +A+ I+S ++   +     +SK   + AL  LK+E+DP+++  + +A +
Sbjct: 17  LNASPQIRSLSSASTILSPDSKTPL-----TSKEKSKAALSLLKSEKDPDRILEICRAAS 76

Query: 62  HNRLVIENRFAFEDTVSRLAGARRFDYIEHLLE-HQKTLPQGRREGFIIRIIMLYGKAEM 121
                  +R AF   V  LA  + F  + +LL+   +  P  + E F    I+LY +A M
Sbjct: 77  LTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANM 136

Query: 122 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALETFLREVPEKFNIELDIISVN 181
           + H++  F D+  +   RTVKS NA+L   +  +D    +    E+P+ + IE D+ + N
Sbjct: 137 LDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYN 196

Query: 182 IVVKAFCDMGILDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 241
            ++K FC+ G    +Y ++ EME+ GI+P+  ++  +IS  Y +++ +    +  +M  R
Sbjct: 197 RMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDR 256

Query: 242 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 301
           G    ++++N+RIQ L  R+++ EA  L++ M + G+ P+ VTY+ +I GFC     E A
Sbjct: 257 GVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEA 316

Query: 302 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 361
           K+++  +   G KP+ + Y T+I+YLC+ GDF  A ++CK++M KNW P+   + SL+ G
Sbjct: 317 KKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNG 376

Query: 362 LKKMGQPGKAQLILTLARKR 381
           L K  +  +A+ ++   +++
Sbjct: 377 LAKDSKVEEAKELIGQVKEK 391

[Close]

BLAST of Lag0031325 vs. ExPASy Swiss-Prot
Match: Q9LG23 (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g55890 PE=1 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.2e-51
Identity = 115/373 (30.83%), Postives = 197/373 (52.82%), Query Frame = 0


Query: 6   PIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKANAHNRL 65
           PIRRF  AATV+     P AV   +    P ++     +  ER+P+++   FK    +  
Sbjct: 16  PIRRFSSAATVV---SEPTAVTAAI---SPPQKSLTSLVNGERNPKRIVEKFKKACESER 75

Query: 66  VIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHAV 125
              N   ++ TV RL  A+R  Y+E +LE QK      +EGF  RII LYGKA M ++A 
Sbjct: 76  FRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQ 135

Query: 126 DTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALETFLREVPEKFNIELDIISVNIVVKA 185
             F +M    C+R+V SFNA+L     ++    +E    E+P K +I+ DI+S N ++KA
Sbjct: 136 KVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKA 195

Query: 186 FCDMGILDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLRGCLPN 245
            C+   L  A  L+ E+E  G++PD+VT+ TL+ + Y   + E+   +W  MV +    +
Sbjct: 196 LCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAID 255

Query: 246 LASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMAKRVYS 305
           + ++N R+  L N  ++ E   L   ++  G+ PD  ++N +I+G    G ++ A+  Y 
Sbjct: 256 IRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYK 315

Query: 306 ALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLKKMG 365
            +   GY+P+   +  ++  +C++GDF  A  + K+  +K +     T+  L+  L K  
Sbjct: 316 EIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGS 375

Query: 366 QPGKAQLILTLAR 379
           +  +A+ I+ +A+
Sbjct: 376 KREEAEEIVKIAK 382

[Close]

BLAST of Lag0031325 vs. ExPASy Swiss-Prot
Match: Q9SAB4 (Pentatricopeptide repeat-containing protein At1g11630, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g11630 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.1e-47
Identity = 101/363 (27.82%), Postives = 194/363 (53.44%), Query Frame = 0


Query: 19  STETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKANAHNRLVIENRFAFEDTVS 78
           S+ +    L  + S +      L  LK+E +P+++  + ++ + +     +R  F   V 
Sbjct: 24  SSSSSIFTLKSLTSKQKKSRDTLSLLKSENNPDRILEICRSTSLSPDYHVDRIIFSVAVV 83

Query: 79  RLAGARRFDYIEHLLE-HQKTLPQGRREGFIIRIIMLYGKAEMIKHAVDTFYDMHLYGCR 138
            LA  + F  +  LL+   +  P  + E F +R I+LYG+A M+  ++ TF ++  Y   
Sbjct: 84  TLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIP 143

Query: 139 RTVKSFNAVLKVLMKTRDLGALETFLREVPEKFNIELDIISVNIVVKAFCDMGILDRAYL 198
           RTVKS NA+L   +  +D         E+P+ + IE D+ + N +++  C+ G    +Y 
Sbjct: 144 RTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYS 203

Query: 199 LMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLRGCLPNLASFNVRIQYLV 258
           ++ EME+  I+P   ++  +I   YK+ + +    +  +M   G    +A++N+ IQ L 
Sbjct: 204 IVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLC 263

Query: 259 NRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMAKRVYSALHGSGYKPNVK 318
            R+++ EA  L++ + +  + P+ VTY+L+I GFC    L+ A  ++  +  +GYKP+ +
Sbjct: 264 KRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSE 323

Query: 319 IYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLKKMGQPGKAQLILTLA 378
            Y T+IH LC+ GDF  A  +C+++M KNW P+   +  L+ GL    +  +A+ ++ + 
Sbjct: 324 CYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVV 383

Query: 379 RKR 381
           +++
Sbjct: 384 KEK 386

[Close]

BLAST of Lag0031325 vs. ExPASy TrEMBL
Match: A0A6J1GVU5 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111457895 PE=4 SV=1)

HSP 1 Score: 748.8 bits (1932), Expect = 1.2e-212
Identity = 371/399 (92.98%), Postives = 388/399 (97.24%), Query Frame = 0


Query: 1   MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAAT+IVS+ETPAAVLN VQ+SKPVEEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATIIVSSETPAAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRII+LYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIVLYGKAEM 120

Query: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALETFLREVPEKFNIELDIISVN 180
           IKHAVDTFY+MHLYGC RTVKSFNAVLKVLMK RDLGALE FLRE PEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180

Query: 181 IVVKAFCDMGILDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 240
           IVVKAFCDMGIL+RAYL +LEMEK+GIRPDVVTYTTLISALYK N+CEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDMGILNRAYLFILEMEKVGIRPDVVTYTTLISALYKHNQCEISNGLWNLMVLR 240

Query: 241 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 300
           GCLPNLASFNVRIQYLV+RRRAW+ANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFL+MA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFN+AYTMCKDAM KNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNMAYTMCKDAMTKNWFPNIDTIHSLLKG 360

Query: 361 LKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTLLAN 400
           L KMGQPGKAQLIL+LARKRVPPFST QLEALN T++AN
Sbjct: 361 LNKMGQPGKAQLILSLARKRVPPFSTTQLEALN-TIMAN 398

[Close]

BLAST of Lag0031325 vs. ExPASy TrEMBL
Match: A0A6J1INV5 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111479183 PE=4 SV=1)

HSP 1 Score: 748.0 bits (1930), Expect = 2.0e-212
Identity = 371/396 (93.69%), Postives = 385/396 (97.22%), Query Frame = 0


Query: 1   MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFCHAATVIVSTET  AVLN VQ+SKPVEEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCHAATVIVSTETSMAVLNHVQNSKPVEEPALIKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRII+LYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIVLYGKAEM 120

Query: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALETFLREVPEKFNIELDIISVN 180
           IKHAVDTFY+MHLYGC RTVKSFNAVLKVLMK RDLGALE FLRE PEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYNMHLYGCSRTVKSFNAVLKVLMKARDLGALEAFLREAPEKFNIELDIISVN 180

Query: 181 IVVKAFCDMGILDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 240
           IVVKAFCDMGIL+RAYLL+LEMEK+GIRPDVVTYTTLISALYK N+CEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDMGILNRAYLLILEMEKVGIRPDVVTYTTLISALYKYNQCEISNGLWNLMVLR 240

Query: 241 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 300
           GCLPNLASFNVRIQYLV+RRRAW+ANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFL+MA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWDANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFN+AYTMCKDAM KNWFPNIDTIHSLLKG
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNMAYTMCKDAMTKNWFPNIDTIHSLLKG 360

Query: 361 LKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTL 397
           L KMGQPGKAQLIL+LARKRVPPFST QLEALNTT+
Sbjct: 361 LNKMGQPGKAQLILSLARKRVPPFSTTQLEALNTTM 396

[Close]

BLAST of Lag0031325 vs. ExPASy TrEMBL
Match: A0A6J1DJH5 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021098 PE=4 SV=1)

HSP 1 Score: 743.4 bits (1918), Expect = 4.9e-211
Identity = 371/396 (93.69%), Postives = 381/396 (96.21%), Query Frame = 0


Query: 1   MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKAN 60
           MLSLRPIRRFC AATVIVSTETPAAV NQV +SK VEEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1   MLSLRPIRRFCRAATVIVSTETPAAVFNQVLNSKSVEEPALIKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALETFLREVPEKFNIELDIISVN 180
           IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGA+E FL E PEKF+IELDIISVN
Sbjct: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGAIEAFLSEAPEKFDIELDIISVN 180

Query: 181 IVVKAFCDMGILDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 240
           IVVKAFCD+GIL RAYLLMLEMEK+GIRPDVVTYTTLISA YKDN CEISNGLWNLMVLR
Sbjct: 181 IVVKAFCDIGILSRAYLLMLEMEKVGIRPDVVTYTTLISAFYKDNLCEISNGLWNLMVLR 240

Query: 241 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 300
           GCLPNLASFNVRIQYLV+RRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGF +MA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFFDMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSAL GSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMN+NWFPNIDTIHSL+KG
Sbjct: 301 KRVYSALQGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNRNWFPNIDTIHSLIKG 360

Query: 361 LKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTL 397
           LKKMGQ GKAQLILTLARKRVPPFS  QLEALNTTL
Sbjct: 361 LKKMGQLGKAQLILTLARKRVPPFSLTQLEALNTTL 396

[Close]

BLAST of Lag0031325 vs. ExPASy TrEMBL
Match: A0A6J1G9L8 (pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111452050 PE=4 SV=1)

HSP 1 Score: 738.8 bits (1906), Expect = 1.2e-209
Identity = 364/397 (91.69%), Postives = 384/397 (96.73%), Query Frame = 0


Query: 1   MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKAN 60
           M+SLRPIRRFCHA TVI STET AA+LNQVQ+SK VEEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1   MVSLRPIRRFCHAGTVIASTETSAAILNQVQNSKTVEEPALIKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AH+RLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61  AHDRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALETFLREVPEKFNIELDIISVN 180
           IKHAVDTFYDMHLYGC RTVKSFNAVLKVLMKTRDLGALETFLRE PEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYDMHLYGCHRTVKSFNAVLKVLMKTRDLGALETFLRETPEKFNIELDIISVN 180

Query: 181 IVVKAFCDMGILDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 240
           IVVK FCDMGIL+RAYLLMLEMEKLGIRPDVVTYTTLISA YK N+CE+SNGLWNLMVLR
Sbjct: 181 IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKVNQCEVSNGLWNLMVLR 240

Query: 241 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 300
           GCLPNLASFNVRIQYLV+RRRAWEANKLMNVM+NIGIVPDE+TYNLV+KGFC+AGFLEMA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWEANKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KR YSALHGSGYK NVKIYQTMIHYLCRSGDFNL+YTMCKDAMNKNWFPNIDT+HS+LK 
Sbjct: 301 KRGYSALHGSGYKSNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLKA 360

Query: 361 LKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTLL 398
           LKKMGQPGKAQLILTLA KRVPPF+T+QLEAL+TTL+
Sbjct: 361 LKKMGQPGKAQLILTLATKRVPPFNTSQLEALSTTLV 397

[Close]

BLAST of Lag0031325 vs. ExPASy TrEMBL
Match: A0A6J1KHG3 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111493273 PE=4 SV=1)

HSP 1 Score: 734.9 bits (1896), Expect = 1.7e-208
Identity = 363/397 (91.44%), Postives = 382/397 (96.22%), Query Frame = 0


Query: 1   MLSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKAN 60
           M+SLRPIRRF HA TVI S ET AA+LNQVQ+SKPVEEPAL+KLKAERDPEKLFHLFKAN
Sbjct: 1   MVSLRPIRRFFHAGTVIASAETSAAILNQVQTSKPVEEPALIKLKAERDPEKLFHLFKAN 60

Query: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120
           AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM
Sbjct: 61  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 120

Query: 121 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALETFLREVPEKFNIELDIISVN 180
           IKHAVDTFYDMHLYGC RTVKSFNAVLK+LMKTRD+GALE FLRE PEKFNIELDIISVN
Sbjct: 121 IKHAVDTFYDMHLYGCHRTVKSFNAVLKILMKTRDIGALEAFLRETPEKFNIELDIISVN 180

Query: 181 IVVKAFCDMGILDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 240
           IVVK FCDMGIL+RAYLLMLEMEKLGIRPDVVTYTTLISA YK N+CEISNGL NLMVLR
Sbjct: 181 IVVKGFCDMGILNRAYLLMLEMEKLGIRPDVVTYTTLISAFYKVNQCEISNGLRNLMVLR 240

Query: 241 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 300
           GCLPNLASFNVRIQYLV+RRRAWEA KLMNVM+NIGIVPDE+TYNLV+KGFC+AGFLEMA
Sbjct: 241 GCLPNLASFNVRIQYLVDRRRAWEAKKLMNVMKNIGIVPDEITYNLVMKGFCRAGFLEMA 300

Query: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 360
           KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNL+YTMCKDAMNKNWFPNIDT+HS+LK 
Sbjct: 301 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLSYTMCKDAMNKNWFPNIDTLHSVLKA 360

Query: 361 LKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTLL 398
           LKKMGQPGKAQLILTLA KRVPPF+T+QLEALNTTL+
Sbjct: 361 LKKMGQPGKAQLILTLATKRVPPFTTSQLEALNTTLV 397

[Close]

BLAST of Lag0031325 vs. TAIR 10
Match: AT1G80150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 534.6 bits (1376), Expect = 6.6e-152
Identity = 267/402 (66.42%), Postives = 322/402 (80.10%), Query Frame = 0


Query: 1   MLSLRPIRRFCH----AATVI--VSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLF 60
           MLSLR IRRFCH    AAT I  VSTE+     NQ+Q  KP+EEPALVKLK+ERDPEKL+
Sbjct: 1   MLSLRHIRRFCHFPSSAATGIAYVSTES-----NQIQGLKPLEEPALVKLKSERDPEKLY 60

Query: 61  HLFKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIML 120
           +LFKANA NRLVIENRFAFEDTVSRLAGA R D+IE LLEHQKTLPQGRREGFI+RIIML
Sbjct: 61  NLFKANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIML 120

Query: 121 YGKAEMIKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALETFLREVPEKFNIEL 180
           YGKA M K A+DTF++M LYGC+R+VKSFNA L+VL    DL  +  FL + P K+ I++
Sbjct: 121 YGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDI 180

Query: 181 DIISVNIVVKAFCDMGILDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLW 240
           D +S NI +K+FC++GILD AY+ M EMEK G+ PDVVTYTTLISALYK  RC I NGLW
Sbjct: 181 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 240

Query: 241 NLMVLRGCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQA 300
           NLMVL+GC PNL +FNVRIQ+LVNRRRAW+AN L+ +M  + + PD +TYN+VIKGF  A
Sbjct: 241 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 300

Query: 301 GFLEMAKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTI 360
            F +MA+RVY+A+HG GYKPN+KIYQTMIHYLC++G+F+LAYTMCKD M K W+PN+DT+
Sbjct: 301 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 360

Query: 361 HSLLKGLKKMGQPGKAQLILTLARKRVPPFSTAQLEALNTTL 397
             LLKGL K GQ  +A+ I+ L  +RVPPF + QL +L + L
Sbjct: 361 EMLLKGLVKKGQLDQAKSIMELVHRRVPPFRSKQLLSLKSIL 397

[Close]

BLAST of Lag0031325 vs. TAIR 10
Match: AT4G36680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 219.2 bits (557), Expect = 6.1e-57
Identity = 125/384 (32.55%), Postives = 212/384 (55.21%), Query Frame = 0


Query: 2   LSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLF-KAN 61
           +SLR +RRF  AA       T A    ++  SK     A   L+ E DP+K   ++   +
Sbjct: 6   ISLRLVRRFASAA---ADGTTTAPSSGKISVSK-----AKSTLRKEHDPDKALKIYANVS 65

Query: 62  AHNRLVIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEM 121
            H+   + +R+A E TV RLA  RRF  IE L+E  K  P+ + E F   +I  YG+A M
Sbjct: 66  DHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASM 125

Query: 122 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALETFLREVPEKFN-IELDIISV 181
             HA+ TF  M  YG  R+  SFNA+L   + +++   +     E+P+++N I  D IS 
Sbjct: 126 FNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISY 185

Query: 182 NIVVKAFCDMGILDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVL 241
            I++K++CD G  ++A  +M +M+  G+    + +TT++S+LYK    E+++ LWN MV 
Sbjct: 186 GILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVK 245

Query: 242 RGCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEM 301
           +GC  + A++NVRI     +       +L+  M ++G+ PD ++YN ++  +C+ G L+ 
Sbjct: 246 KGCELDNAAYNVRIM-SAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDE 305

Query: 302 AKRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLK 361
           AK+VY  L G+   PN   ++T+I +LC S  +   Y + K ++  +  P+ +T+  L+ 
Sbjct: 306 AKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVV 365

Query: 362 GLKKMGQPGKAQLILTLARKRVPP 384
           GL +  +   A+ ++   +K+ PP
Sbjct: 366 GLVENKKRDDAKGLIRTVKKKFPP 380

[Close]

BLAST of Lag0031325 vs. TAIR 10
Match: AT1G61870.1 (pentatricopeptide repeat 336 )

HSP 1 Score: 208.4 bits (529), Expect = 1.1e-53
Identity = 116/380 (30.53%), Postives = 213/380 (56.05%), Query Frame = 0


Query: 2   LSLRPIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKANA 61
           L+  P  R   +A+ I+S ++   +     +SK   + AL  LK+E+DP+++  + +A +
Sbjct: 17  LNASPQIRSLSSASTILSPDSKTPL-----TSKEKSKAALSLLKSEKDPDRILEICRAAS 76

Query: 62  HNRLVIENRFAFEDTVSRLAGARRFDYIEHLLE-HQKTLPQGRREGFIIRIIMLYGKAEM 121
                  +R AF   V  LA  + F  + +LL+   +  P  + E F    I+LY +A M
Sbjct: 77  LTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANM 136

Query: 122 IKHAVDTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALETFLREVPEKFNIELDIISVN 181
           + H++  F D+  +   RTVKS NA+L   +  +D    +    E+P+ + IE D+ + N
Sbjct: 137 LDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYN 196

Query: 182 IVVKAFCDMGILDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLR 241
            ++K FC+ G    +Y ++ EME+ GI+P+  ++  +IS  Y +++ +    +  +M  R
Sbjct: 197 RMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDR 256

Query: 242 GCLPNLASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMA 301
           G    ++++N+RIQ L  R+++ EA  L++ M + G+ P+ VTY+ +I GFC     E A
Sbjct: 257 GVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEA 316

Query: 302 KRVYSALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKG 361
           K+++  +   G KP+ + Y T+I+YLC+ GDF  A ++CK++M KNW P+   + SL+ G
Sbjct: 317 KKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNG 376

Query: 362 LKKMGQPGKAQLILTLARKR 381
           L K  +  +A+ ++   +++
Sbjct: 377 LAKDSKVEEAKELIGQVKEK 391

[Close]

BLAST of Lag0031325 vs. TAIR 10
Match: AT1G55890.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 204.5 bits (519), Expect = 1.6e-52
Identity = 115/373 (30.83%), Postives = 197/373 (52.82%), Query Frame = 0


Query: 6   PIRRFCHAATVIVSTETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKANAHNRL 65
           PIRRF  AATV+     P AV   +    P ++     +  ER+P+++   FK    +  
Sbjct: 16  PIRRFSSAATVV---SEPTAVTAAI---SPPQKSLTSLVNGERNPKRIVEKFKKACESER 75

Query: 66  VIENRFAFEDTVSRLAGARRFDYIEHLLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHAV 125
              N   ++ TV RL  A+R  Y+E +LE QK      +EGF  RII LYGKA M ++A 
Sbjct: 76  FRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQ 135

Query: 126 DTFYDMHLYGCRRTVKSFNAVLKVLMKTRDLGALETFLREVPEKFNIELDIISVNIVVKA 185
             F +M    C+R+V SFNA+L     ++    +E    E+P K +I+ DI+S N ++KA
Sbjct: 136 KVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKA 195

Query: 186 FCDMGILDRAYLLMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLRGCLPN 245
            C+   L  A  L+ E+E  G++PD+VT+ TL+ + Y   + E+   +W  MV +    +
Sbjct: 196 LCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAID 255

Query: 246 LASFNVRIQYLVNRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMAKRVYS 305
           + ++N R+  L N  ++ E   L   ++  G+ PD  ++N +I+G    G ++ A+  Y 
Sbjct: 256 IRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYK 315

Query: 306 ALHGSGYKPNVKIYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLKKMG 365
            +   GY+P+   +  ++  +C++GDF  A  + K+  +K +     T+  L+  L K  
Sbjct: 316 EIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGS 375

Query: 366 QPGKAQLILTLAR 379
           +  +A+ I+ +A+
Sbjct: 376 KREEAEEIVKIAK 382

[Close]

BLAST of Lag0031325 vs. TAIR 10
Match: AT1G11630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 192.2 bits (487), Expect = 8.0e-49
Identity = 101/363 (27.82%), Postives = 194/363 (53.44%), Query Frame = 0


Query: 19  STETPAAVLNQVQSSKPVEEPALVKLKAERDPEKLFHLFKANAHNRLVIENRFAFEDTVS 78
           S+ +    L  + S +      L  LK+E +P+++  + ++ + +     +R  F   V 
Sbjct: 24  SSSSSIFTLKSLTSKQKKSRDTLSLLKSENNPDRILEICRSTSLSPDYHVDRIIFSVAVV 83

Query: 79  RLAGARRFDYIEHLLE-HQKTLPQGRREGFIIRIIMLYGKAEMIKHAVDTFYDMHLYGCR 138
            LA  + F  +  LL+   +  P  + E F +R I+LYG+A M+  ++ TF ++  Y   
Sbjct: 84  TLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIP 143

Query: 139 RTVKSFNAVLKVLMKTRDLGALETFLREVPEKFNIELDIISVNIVVKAFCDMGILDRAYL 198
           RTVKS NA+L   +  +D         E+P+ + IE D+ + N +++  C+ G    +Y 
Sbjct: 144 RTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYS 203

Query: 199 LMLEMEKLGIRPDVVTYTTLISALYKDNRCEISNGLWNLMVLRGCLPNLASFNVRIQYLV 258
           ++ EME+  I+P   ++  +I   YK+ + +    +  +M   G    +A++N+ IQ L 
Sbjct: 204 IVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLC 263

Query: 259 NRRRAWEANKLMNVMRNIGIVPDEVTYNLVIKGFCQAGFLEMAKRVYSALHGSGYKPNVK 318
            R+++ EA  L++ + +  + P+ VTY+L+I GFC    L+ A  ++  +  +GYKP+ +
Sbjct: 264 KRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSE 323

Query: 319 IYQTMIHYLCRSGDFNLAYTMCKDAMNKNWFPNIDTIHSLLKGLKKMGQPGKAQLILTLA 378
            Y T+IH LC+ GDF  A  +C+++M KNW P+   +  L+ GL    +  +A+ ++ + 
Sbjct: 324 CYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKELIAVV 383

Query: 379 RKR 381
           +++
Sbjct: 384 KEK 386

The following BLAST results are available for this feature:

BLAST of Lag0031325 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023527765.1	2.2e-213	93.94	pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Cucurbita ...	[more]
KAG6581920.1	1.4e-212	93.43	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022956097.1	2.4e-212	92.98	pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucur...	[more]
XP_022979497.1	4.1e-212	93.69	pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like [Cucur...	[more]
XP_038901360.1	5.9e-211	92.50	pentatricopeptide repeat-containing protein At1g80150, mitochondrial [Benincasa ...	[more]

BLAST of Lag0031325 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GW57	9.3e-151	66.42	Pentatricopeptide repeat-containing protein At1g80150, mitochondrial OS=Arabidop...	[more]
Q9M065	8.6e-56	32.55	Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidop...	[more]
Q8LE47	1.5e-52	30.53	Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidop...	[more]
Q9LG23	2.2e-51	30.83	Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidop...	[more]
Q9SAB4	1.1e-47	27.82	Pentatricopeptide repeat-containing protein At1g11630, mitochondrial OS=Arabidop...	[more]

BLAST of Lag0031325 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GVU5	1.2e-212	92.98	pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cuc...	[more]
A0A6J1INV5	2.0e-212	93.69	pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cuc...	[more]
A0A6J1DJH5	4.9e-211	93.69	pentatricopeptide repeat-containing protein At1g80150, mitochondrial isoform X1 ...	[more]
A0A6J1G9L8	1.2e-209	91.69	pentatricopeptide repeat-containing protein At1g80150, mitochondrial-like OS=Cuc...	[more]
A0A6J1KHG3	1.7e-208	91.44	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g80150, mito...	[more]

BLAST of Lag0031325 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80150.1	6.6e-152	66.42	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G36680.1	6.1e-57	32.55	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G61870.1	1.1e-53	30.53	pentatricopeptide repeat 336	[more]
AT1G55890.1	1.6e-52	30.83	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G11630.1	8.0e-49	27.82	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 47..231 e-value: 6.6E-22 score: 80.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 232..399 e-value: 2.5E-30 score: 107.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 282..316 e-value: 4.3E-7 score: 27.7 coord: 318..350 e-value: 3.1E-5 score: 21.8 coord: 178..211 e-value: 3.9E-4 score: 18.4 coord: 212..245 e-value: 1.4E-4 score: 19.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 175..223 e-value: 3.6E-10 score: 39.9 coord: 244..293 e-value: 3.4E-10 score: 39.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 111..136 e-value: 0.55 score: 10.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 280..314 score: 12.145178
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 315..349 score: 8.988323
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 175..209 score: 10.610596
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 210..244 score: 9.788499
None	No IPR available	PANTHER	PTHR46128:SF6	OS08G0499800 PROTEIN	coord: 1..391
None	No IPR available	PANTHER	PTHR46128	MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1	coord: 1..391

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0031325.1	Lag0031325.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding