Lag0031285 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0031285
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	U11/U12 small nuclear ribonucleoprotein 25 kDa protein, putative
Location	chr11: 6609634 .. 6611770 (-)
RNA-Seq Expression	Lag0031285
Synteny	Lag0031285

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAAGGATTGCCGGCCACAGAGAGAGGACCAAGATCGGTAACTTATGGCGTTTCAATCGCTTCATTGATAACCGGTGTTTCGCTCCGCCTACGCTCGACGCCGATGCTGACGTTGACGCTCTCCGGCGGCGCCCTTATCGCTTGCTTCCGAGGCCGGACCTCATCGATATCTTCGTCCTCAAGCTCGACGGCTCTGTATTTGGTGATTCCTTCGCCATTTCTGACTTTTTCTTTTTCTTTCTTCTTGCTTTTTCTTCGCTTCTTGTAAGACATTTACTCCGTCTTGGATGAAGTTCGCTTTTGCTTCGAATATTGCCATCGGTTTGCTTTTTCGGTGCTCGAGATGAGAGATGGAAGGAAACGGAAACGGAAAGTGCTTGAAGATAAATTGCTTGAGAGACTCTATAAGTTACCGAGAACACTGTAGCGGAAAGCGTTTTAAAAGAGTGGCTAATTAAGACGGCTATGGCTAAGAAAAATGTGATATCAACATAATTAACTCTCGCGATTATTCCTTTGTACTTTGCCTCTTTTTTCCCCCTGCTTTTATAGCTGTGCCAAAATTTTAGTATATTGCGGGAATTGCAGTAGTCACCATAAATTGAATCGGTTTTATATGATTTGGCTGTCCAGGTGTTCGTGTATCGCGCAATGGTACGGTTGCAGATTTGAAGCGAACGATAGAGGAAGTTTTTGATTCGCCCGAGGGGAGTGAGCATTGCAAGATTACATGGTAGTATCGACCTTGTTATGAGATTTAAGACTAGTTTTACCACCAATGATTTTGTTTTTGGGGGCTTTGTAGTTTTATTTGGATTTTACATGATATGCTCTTAGGTCACTTGTCTGGGGACATTTCTGCTTATGTTATGAAGGCGAAAAGCTTATTGATGACAAGGCATGCATTAGAGTTCTTGGCATTAAAGATGGCGATCAGGTGTGACAATGTGGTGATGTTGTGACGTGTCTCTTGCTTGTTCATTGAGTTGAATGCTGGCTGCTCTCTAGATTTTAATGTCTTTGTCCTGTTATATAATGCAGCTTCAGTTTATTAGGCATATGACAATCAACTGTCTACCAATGAAGAGAGATAGGAAGAACCAAACTGTTTCTTGCAAAACAGTATTGTTGTAAGTTATACTTTCTTATGGCTGCAGTACCACATGCGTCTGTTTCTTGCAAAACGCTGTCGTTTTAAGTTGTTATTTCTAATGACTGCACTAGCACATGCACAAGTATGCCAATCCACGGGCAGATGCCATTCTAATTTATGAATACTATTGCTCAATTTGATGGTTTGTTTGAAGTCCCATTGAGCACGTGGCAGTCTAGAAAATGTGCAAAATGTACAGTTTGGTGGGCCTCCCCTGGGTTTGGGGAGGGGAGTCAACAATTTGTTTAGAATCGTACCCAAAATCAATTTTCCATTGTTTCTATTTTACATTTTTAGTAATGCAGTTATCATCTCTGTTGCATTCCTCATTTCTACAAATAAATAGCATCTATATTCATAATTAGACTCGCTTTTATTGTCTAAGACTTACCGTTCTTAATATAACATTTCTAGAAACAGGAAATGTAGCATAGTTCAATAGTAAGATAAATTTCTTGGACCCCATTTGATAACCATTTAGATTTTGAAAATTAAACTTATATGTCTATGTTTCTCTTTCTCTGTTTTGTTATCTATTTTAGGAATGTTTTCAAAATCCAAACCAAGTTTTGAAAACTTAAAAAATAGTTTTAAAAACTTGTTTTTGTTTTAGAATTTAACTCTCAATTCAAATCTTTCTTTAAGAAATATGAAAAGTGAAAACCATCGTAAAGAAACAGTAAGAAAACAAGCTCCGCCTCAATATTTGCTTCTTACTGTTCTATTTGATATTAAACTTATACATCCCATAAAAGTCTGTCAGCAGAATCAAAATATGTCGAAGAAAATCAATTGGCTGGGCAAGATGATCCCGAGAATTATGAAGTTCACGGGGAAGGTTCCAATCAGGAGGAGATTCCTATGGCTGGATTTCAGCTAGCAAATTTCTTCAGAGGACGGCTATTGTATTCCAGGATTTGGGGGTTTTTCAAGAGTGCATCAGAAGGCAGGAATAGGCCTTCTGGATTCTGCATTACCTGA

mRNA sequence

ATGCGAAGGATTGCCGGCCACAGAGAGAGGACCAAGATCGGTAACTTATGGCGTTTCAATCGCTTCATTGATAACCGGTGTTTCGCTCCGCCTACGCTCGACGCCGATGCTGACGTTGACGCTCTCCGGCGGCGCCCTTATCGCTTGCTTCCGAGGCCGGACCTCATCGATATCTTCGTCCTCAAGCTCGACGGCTCTGTATTTGGTGTTCGTGTATCGCGCAATGGTACGGTTGCAGATTTGAAGCGAACGATAGAGGAAGTTTTTGATTCGCCCGAGGGGAGTGAGCATTGCAAGATTACATGGTCACTTGTCTGGGGACATTTCTGCTTATGTTATGAAGGCGAAAAGCTTATTGATGACAAGGCATGCATTAGAGTTCTTGGCATTAAAGATGGCGATCAGCTTCAGTTTATTAGGCATATGACAATCAACTGTCTACCAATGAAGAGAGATAGGAAGAACCAAACTGTTTCTTGCAAAACAGTATTGTTTCTGTCAGCAGAATCAAAATATGTCGAAGAAAATCAATTGGCTGGGCAAGATGATCCCGAGAATTATGAAGTTCACGGGGAAGGTTCCAATCAGGAGGAGATTCCTATGGCTGGATTTCAGCTAGCAAATTTCTTCAGAGGACGGCTATTGTATTCCAGGATTTGGGGGTTTTTCAAGAGTGCATCAGAAGGCAGGAATAGGCCTTCTGGATTCTGCATTACCTGA

Coding sequence (CDS)

ATGCGAAGGATTGCCGGCCACAGAGAGAGGACCAAGATCGGTAACTTATGGCGTTTCAATCGCTTCATTGATAACCGGTGTTTCGCTCCGCCTACGCTCGACGCCGATGCTGACGTTGACGCTCTCCGGCGGCGCCCTTATCGCTTGCTTCCGAGGCCGGACCTCATCGATATCTTCGTCCTCAAGCTCGACGGCTCTGTATTTGGTGTTCGTGTATCGCGCAATGGTACGGTTGCAGATTTGAAGCGAACGATAGAGGAAGTTTTTGATTCGCCCGAGGGGAGTGAGCATTGCAAGATTACATGGTCACTTGTCTGGGGACATTTCTGCTTATGTTATGAAGGCGAAAAGCTTATTGATGACAAGGCATGCATTAGAGTTCTTGGCATTAAAGATGGCGATCAGCTTCAGTTTATTAGGCATATGACAATCAACTGTCTACCAATGAAGAGAGATAGGAAGAACCAAACTGTTTCTTGCAAAACAGTATTGTTTCTGTCAGCAGAATCAAAATATGTCGAAGAAAATCAATTGGCTGGGCAAGATGATCCCGAGAATTATGAAGTTCACGGGGAAGGTTCCAATCAGGAGGAGATTCCTATGGCTGGATTTCAGCTAGCAAATTTCTTCAGAGGACGGCTATTGTATTCCAGGATTTGGGGGTTTTTCAAGAGTGCATCAGAAGGCAGGAATAGGCCTTCTGGATTCTGCATTACCTGA

Protein sequence

MRRIAGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVFGVRVSRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKYVEENQLAGQDDPENYEVHGEGSNQEEIPMAGFQLANFFRGRLLYSRIWGFFKSASEGRNRPSGFCIT

Homology

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BLAST of Lag0031285 vs. NCBI nr
Match: XP_022998358.1 (uncharacterized protein LOC111493024 [Cucurbita maxima])

HSP 1 Score: 433.3 bits (1113), Expect = 1.3e-117
Identity = 207/240 (86.25%), Postives = 219/240 (91.25%), Query Frame = 0


Query: 1   MRRIAGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFV 60
           MRRI G RER+KIGNLWRFNRFIDNRC AP TLD D DVDALRRRPYRLLPR +LID+FV
Sbjct: 1   MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFV 60

Query: 61  LKLDGSVFGVRVSRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFCLCYEGEKLID 120
           LKLDGSVFGVRV+RNGTVADLK+ IEEVFDSP  SEHCKITWSLVWGHFCLCYEGEKLID
Sbjct: 61  LKLDGSVFGVRVARNGTVADLKQAIEEVFDSPRASEHCKITWSLVWGHFCLCYEGEKLID 120

Query: 121 DKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKYVEENQLAG 180
           DKA IRV+GIKDGDQLQFIRHM+INCLPMKRDRKNQ V CKTVLFL AESK +E NQ+AG
Sbjct: 121 DKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAG 180

Query: 181 QDDPENYEVHGEGSNQEEIPMAGFQLANFFRGRLLYSRIWGFFKSASEGRNRP-SGFCIT 240
           Q DP NYEVH +GSNQEEIPMAGFQLAN FRGRLLYS+IWGFF+SASEGRNRP SGFCIT
Sbjct: 181 QGDPVNYEVHEDGSNQEEIPMAGFQLANIFRGRLLYSKIWGFFRSASEGRNRPSSGFCIT 240

[Close]

BLAST of Lag0031285 vs. NCBI nr
Match: XP_022948349.1 (uncharacterized protein LOC111452053 [Cucurbita moschata] >KAG7036517.1 U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 431.4 bits (1108), Expect = 5.0e-117
Identity = 206/240 (85.83%), Postives = 219/240 (91.25%), Query Frame = 0


Query: 1   MRRIAGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFV 60
           MRRI G RER+KIGNLWRFNRFIDNRC AP TLD D DVDALRRRPYRLLPR +LID+FV
Sbjct: 1   MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFV 60

Query: 61  LKLDGSVFGVRVSRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFCLCYEGEKLID 120
           LKLDGSVFGVRV+RNGTVADLK+ IEEVFDSP  SEHCKITWSLVWGHFCLCYEGEKLID
Sbjct: 61  LKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKITWSLVWGHFCLCYEGEKLID 120

Query: 121 DKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKYVEENQLAG 180
           DKA IRV+GIKDGDQLQFIRHM+INCLPMKRDRKNQ V CKTVLFL AESK +E NQ+AG
Sbjct: 121 DKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAG 180

Query: 181 QDDPENYEVHGEGSNQEEIPMAGFQLANFFRGRLLYSRIWGFFKSASEGRNRP-SGFCIT 240
           Q DP NYEVH +GSNQEEIPMAGFQLAN FRGR+LYS+IWGFF+SASEGRNRP SGFCIT
Sbjct: 181 QGDPVNYEVHEDGSNQEEIPMAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCIT 240

[Close]

BLAST of Lag0031285 vs. NCBI nr
Match: XP_023525469.1 (uncharacterized protein LOC111789062 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 430.3 bits (1105), Expect = 1.1e-116
Identity = 205/240 (85.42%), Postives = 218/240 (90.83%), Query Frame = 0


Query: 1   MRRIAGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFV 60
           MRRI G RER+KIGNLWRFNRFIDNRC AP TLD D DVDALRRRPYRLLPR +LID+FV
Sbjct: 1   MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFV 60

Query: 61  LKLDGSVFGVRVSRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFCLCYEGEKLID 120
           LKLDGSVFGVRV+RNGTVADLK+ IEEVFDSP  SEHCKITWSLVWGHFCLCYEGEKLID
Sbjct: 61  LKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKITWSLVWGHFCLCYEGEKLID 120

Query: 121 DKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKYVEENQLAG 180
           DKA IRV+GIKDGDQLQF+RHM+INCLPMKRDRKNQ V CKTVLFL AE K +E NQ+AG
Sbjct: 121 DKAYIRVVGIKDGDQLQFVRHMSINCLPMKRDRKNQAVPCKTVLFLPAEPKSIEGNQVAG 180

Query: 181 QDDPENYEVHGEGSNQEEIPMAGFQLANFFRGRLLYSRIWGFFKSASEGRNRPS-GFCIT 240
           Q DP NYEVH +GSNQEEIPMAGFQLAN FRGRLLYS+IWGFF+SASEGRNRPS GFCIT
Sbjct: 181 QGDPVNYEVHEDGSNQEEIPMAGFQLANIFRGRLLYSKIWGFFRSASEGRNRPSAGFCIT 240

[Close]

BLAST of Lag0031285 vs. NCBI nr
Match: XP_022153470.1 (uncharacterized protein LOC111020973 isoform X1 [Momordica charantia] >XP_022153471.1 uncharacterized protein LOC111020973 isoform X1 [Momordica charantia])

HSP 1 Score: 412.9 bits (1060), Expect = 1.9e-111
Identity = 198/240 (82.50%), Postives = 212/240 (88.33%), Query Frame = 0


Query: 1   MRRIAGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFV 60
           M RI G RER+KIGNLWRFNRFID RC APPTLD D DVDAL R PYRLLPR DLID+FV
Sbjct: 1   MPRIGG-RERSKIGNLWRFNRFIDTRCLAPPTLDGDGDVDALSRMPYRLLPRQDLIDLFV 60

Query: 61  LKLDGSVFGVRVSRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFCLCYEGEKLID 120
           LKLDGSVFGVRV+RNGTVA+LKR IEEVF SP G EHCKITWSLVWGHFCLCYEG+ LID
Sbjct: 61  LKLDGSVFGVRVARNGTVAELKRAIEEVFVSPGGDEHCKITWSLVWGHFCLCYEGQNLID 120

Query: 121 DKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKYVEENQLAG 180
           DKACIRV GIKDGDQLQFIRHM+I+CLP+KRDRK+QTVSC+TVLFL  ESK VE+NQLAG
Sbjct: 121 DKACIRVFGIKDGDQLQFIRHMSISCLPVKRDRKSQTVSCRTVLFLPPESKCVEDNQLAG 180

Query: 181 QDDPENY-EVHGEGSNQEEIPMAGFQLANFFRGRLLYSRIWGFFKSASEGRNRPSGFCIT 240
            DDPE Y EVH +GSNQEE+P+ GF LANFFRGR LYSRIWGF KSASEGRNRPSGF IT
Sbjct: 181 PDDPETYEEVHEDGSNQEEVPIPGFHLANFFRGRFLYSRIWGFLKSASEGRNRPSGFGIT 239

[Close]

BLAST of Lag0031285 vs. NCBI nr
Match: XP_038904269.1 (uncharacterized protein LOC120090621 isoform X1 [Benincasa hispida])

HSP 1 Score: 399.4 bits (1025), Expect = 2.1e-107
Identity = 197/244 (80.74%), Postives = 211/244 (86.48%), Query Frame = 0


Query: 1   MRRIAGHRERTKIGNLWRFNRFIDNRCFA-PPTLDADADVDALRRRPYRLLPRPDLIDIF 60
           M  I+ H ERTKIGNLWRF+RF+D RC A PPTLD DAD  AL RRPYRLLPR DLID+F
Sbjct: 1   MPTISTHSERTKIGNLWRFSRFVDYRCLAPPPTLDIDADFRALSRRPYRLLPRQDLIDLF 60

Query: 61  VLKLDGSVFGVRVSRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFCLCYEGEKLI 120
           VLKLDGSVFG+RVSRN TVADLKR IEEVFDSP GSEHCKITWSL+WGHFCLCYEGEKLI
Sbjct: 61  VLKLDGSVFGIRVSRNATVADLKRAIEEVFDSPGGSEHCKITWSLIWGHFCLCYEGEKLI 120

Query: 121 DDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKYVEENQLA 180
           DDK CIRV GIKDGDQLQF+RHM+INCLP+KRD KNQ+VSCKT+L LS ESK VEENQ A
Sbjct: 121 DDKTCIRVFGIKDGDQLQFLRHMSINCLPVKRDGKNQSVSCKTMLSLSPESKSVEENQPA 180

Query: 181 GQDDPENYEVHGEGSNQEEI---PMAGFQLANFFRGRLLYSRIWGFFKSASEGRNRP-SG 240
           GQDD ENY+VH  GSNQEE+     AGFQLANFFRGR+LYSRIWGF KSASEGRNRP SG
Sbjct: 181 GQDDLENYQVHRGGSNQEEVVSMGRAGFQLANFFRGRVLYSRIWGFRKSASEGRNRPSSG 240

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BLAST of Lag0031285 vs. ExPASy Swiss-Prot
Match: Q84WS8 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Arabidopsis thaliana OX=3702 GN=SNRNP25 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.6e-11
Identity = 40/120 (33.33%), Postives = 64/120 (53.33%), Query Frame = 0


Query: 50  LPRPDLIDIFVLKLDGSVFGVRVSRNGTVADLKRTIEEVFDSPEGSE--HCKITWSLVWG 109
           L +   + + V+KLDGS   V V  + T+ DLK  I++  +  E +   H  I+W  VW 
Sbjct: 46  LEKGSAMRLSVVKLDGSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWS 105

Query: 110 HFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLS 168
           +FCL    EKL+DD A ++ +GI++  Q+ F+ ++      MK+ R   +   K  LF S
Sbjct: 106 NFCLSCNNEKLLDDNAVLQDVGIRNNSQVTFMPYV------MKKGRGRHSKRKKHRLFRS 159

[Close]

BLAST of Lag0031285 vs. ExPASy Swiss-Prot
Match: Q8VIK1 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Mus musculus OX=10090 GN=Snrnp25 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.1e-09
Identity = 33/87 (37.93%), Postives = 50/87 (57.47%), Query Frame = 0


Query: 60  VLKLDGSVFGVRVSRNGTVADLKRTIEEVFDSPE----GSEHCKITWSLVWGHFCLCYEG 119
           V K+DG V  V V +N TV DLK+ I+      +    G +H  I+WS VW  + L   G
Sbjct: 36  VCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQEREGGVQH--ISWSYVWRTYHLTSAG 95

Query: 120 EKLIDDKACIRVLGIKDGDQLQFIRHM 143
           EKL +D+  +R  GI++ D++ FI+ +
Sbjct: 96  EKLTEDRKKLRDYGIRNRDEVSFIKKL 120

[Close]

BLAST of Lag0031285 vs. ExPASy Swiss-Prot
Match: Q3ZBQ4 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Bos taurus OX=9913 GN=SNRNP25 PE=2 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08
Identity = 33/87 (37.93%), Postives = 50/87 (57.47%), Query Frame = 0


Query: 60  VLKLDGSVFGVRVSRNGTVADLKRTIEEVF----DSPEGSEHCKITWSLVWGHFCLCYEG 119
           V K+DG V  V V +N TV DLK+ I+       +   G +H  I+WS VW  + L   G
Sbjct: 36  VCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLRQEREGGIQH--ISWSYVWRTYHLTSAG 95

Query: 120 EKLIDDKACIRVLGIKDGDQLQFIRHM 143
           EKL +D+  +R  GI++ D++ FI+ +
Sbjct: 96  EKLTEDRKKLRDYGIRNRDEVSFIKKL 120

[Close]

BLAST of Lag0031285 vs. ExPASy Swiss-Prot
Match: Q9BV90 (U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP25 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.1e-08
Identity = 32/87 (36.78%), Postives = 50/87 (57.47%), Query Frame = 0


Query: 60  VLKLDGSVFGVRVSRNGTVADLKRTIEEVFDSPE----GSEHCKITWSLVWGHFCLCYEG 119
           V K+DG V  V V ++ TV DLK+ I+      +    G +H  I+WS VW  + L   G
Sbjct: 45  VCKMDGEVMPVVVVQSATVLDLKKAIQRYVQLKQEREGGIQH--ISWSYVWRTYHLTSAG 104

Query: 120 EKLIDDKACIRVLGIKDGDQLQFIRHM 143
           EKL +D+  +R  GI++ D++ FI+ +
Sbjct: 105 EKLTEDRKKLRDYGIRNRDEVSFIKKL 129

[Close]

BLAST of Lag0031285 vs. ExPASy TrEMBL
Match: A0A6J1KGI2 (uncharacterized protein LOC111493024 OS=Cucurbita maxima OX=3661 GN=LOC111493024 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 6.4e-118
Identity = 207/240 (86.25%), Postives = 219/240 (91.25%), Query Frame = 0


Query: 1   MRRIAGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFV 60
           MRRI G RER+KIGNLWRFNRFIDNRC AP TLD D DVDALRRRPYRLLPR +LID+FV
Sbjct: 1   MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFV 60

Query: 61  LKLDGSVFGVRVSRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFCLCYEGEKLID 120
           LKLDGSVFGVRV+RNGTVADLK+ IEEVFDSP  SEHCKITWSLVWGHFCLCYEGEKLID
Sbjct: 61  LKLDGSVFGVRVARNGTVADLKQAIEEVFDSPRASEHCKITWSLVWGHFCLCYEGEKLID 120

Query: 121 DKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKYVEENQLAG 180
           DKA IRV+GIKDGDQLQFIRHM+INCLPMKRDRKNQ V CKTVLFL AESK +E NQ+AG
Sbjct: 121 DKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAG 180

Query: 181 QDDPENYEVHGEGSNQEEIPMAGFQLANFFRGRLLYSRIWGFFKSASEGRNRP-SGFCIT 240
           Q DP NYEVH +GSNQEEIPMAGFQLAN FRGRLLYS+IWGFF+SASEGRNRP SGFCIT
Sbjct: 181 QGDPVNYEVHEDGSNQEEIPMAGFQLANIFRGRLLYSKIWGFFRSASEGRNRPSSGFCIT 240

[Close]

BLAST of Lag0031285 vs. ExPASy TrEMBL
Match: A0A6J1G9M5 (uncharacterized protein LOC111452053 OS=Cucurbita moschata OX=3662 GN=LOC111452053 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.4e-117
Identity = 206/240 (85.83%), Postives = 219/240 (91.25%), Query Frame = 0


Query: 1   MRRIAGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFV 60
           MRRI G RER+KIGNLWRFNRFIDNRC AP TLD D DVDALRRRPYRLLPR +LID+FV
Sbjct: 1   MRRIGGPRERSKIGNLWRFNRFIDNRCLAPLTLDGDGDVDALRRRPYRLLPRLELIDLFV 60

Query: 61  LKLDGSVFGVRVSRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFCLCYEGEKLID 120
           LKLDGSVFGVRV+RNGTVADLK+ IEEVFDSP  SEHCKITWSLVWGHFCLCYEGEKLID
Sbjct: 61  LKLDGSVFGVRVARNGTVADLKQAIEEVFDSPGASEHCKITWSLVWGHFCLCYEGEKLID 120

Query: 121 DKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKYVEENQLAG 180
           DKA IRV+GIKDGDQLQFIRHM+INCLPMKRDRKNQ V CKTVLFL AESK +E NQ+AG
Sbjct: 121 DKAYIRVVGIKDGDQLQFIRHMSINCLPMKRDRKNQAVPCKTVLFLPAESKSIEGNQVAG 180

Query: 181 QDDPENYEVHGEGSNQEEIPMAGFQLANFFRGRLLYSRIWGFFKSASEGRNRP-SGFCIT 240
           Q DP NYEVH +GSNQEEIPMAGFQLAN FRGR+LYS+IWGFF+SASEGRNRP SGFCIT
Sbjct: 181 QGDPVNYEVHEDGSNQEEIPMAGFQLANIFRGRVLYSKIWGFFRSASEGRNRPSSGFCIT 240

[Close]

BLAST of Lag0031285 vs. ExPASy TrEMBL
Match: A0A6J1DGY1 (uncharacterized protein LOC111020973 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020973 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 9.0e-112
Identity = 198/240 (82.50%), Postives = 212/240 (88.33%), Query Frame = 0


Query: 1   MRRIAGHRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFV 60
           M RI G RER+KIGNLWRFNRFID RC APPTLD D DVDAL R PYRLLPR DLID+FV
Sbjct: 1   MPRIGG-RERSKIGNLWRFNRFIDTRCLAPPTLDGDGDVDALSRMPYRLLPRQDLIDLFV 60

Query: 61  LKLDGSVFGVRVSRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFCLCYEGEKLID 120
           LKLDGSVFGVRV+RNGTVA+LKR IEEVF SP G EHCKITWSLVWGHFCLCYEG+ LID
Sbjct: 61  LKLDGSVFGVRVARNGTVAELKRAIEEVFVSPGGDEHCKITWSLVWGHFCLCYEGQNLID 120

Query: 121 DKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKYVEENQLAG 180
           DKACIRV GIKDGDQLQFIRHM+I+CLP+KRDRK+QTVSC+TVLFL  ESK VE+NQLAG
Sbjct: 121 DKACIRVFGIKDGDQLQFIRHMSISCLPVKRDRKSQTVSCRTVLFLPPESKCVEDNQLAG 180

Query: 181 QDDPENY-EVHGEGSNQEEIPMAGFQLANFFRGRLLYSRIWGFFKSASEGRNRPSGFCIT 240
            DDPE Y EVH +GSNQEE+P+ GF LANFFRGR LYSRIWGF KSASEGRNRPSGF IT
Sbjct: 181 PDDPETYEEVHEDGSNQEEVPIPGFHLANFFRGRFLYSRIWGFLKSASEGRNRPSGFGIT 239

[Close]

BLAST of Lag0031285 vs. ExPASy TrEMBL
Match: A0A1S3BY00 (uncharacterized protein LOC103494657 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494657 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.6e-100
Identity = 179/231 (77.49%), Postives = 196/231 (84.85%), Query Frame = 0


Query: 7   HRERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGS 66
           H +RTKI NLWRF RFID RCFAPPTLD + D DAL RRPYRLLPR DLID+FVLKLDGS
Sbjct: 7   HSDRTKIANLWRFTRFIDYRCFAPPTLDFNPDSDALSRRPYRLLPRQDLIDLFVLKLDGS 66

Query: 67  VFGVRVSRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFCLCYEGEKLIDDKACIR 126
           VFGVRVSRN TVADLKR IEEVFDSP GSEH KITWSL+WGHFCLCYEGEKL DDKACIR
Sbjct: 67  VFGVRVSRNSTVADLKRAIEEVFDSPGGSEHYKITWSLIWGHFCLCYEGEKLTDDKACIR 126

Query: 127 VLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKYVEENQLAGQDDPEN 186
              IKDGDQLQFIRHM+INCL MK+DRKNQTV CKT+LF S ESK VEENQ  G+DD ++
Sbjct: 127 GYSIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKTILFFSPESKAVEENQADGRDDIKD 186

Query: 187 YEVHGEGSNQEEI---PMAGFQLANFFRGRLLYSRIWGFFKSASEGRNRPS 235
           Y+VH + SNQEE+     A FQL+NFF+GR+LYSR+WGF KSASEGRNR S
Sbjct: 187 YQVHRDDSNQEEVASMARARFQLSNFFKGRVLYSRVWGFCKSASEGRNRAS 237

[Close]

BLAST of Lag0031285 vs. ExPASy TrEMBL
Match: A0A0A0KTJ1 (Ubiquitin_4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006470 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 3.0e-99
Identity = 178/229 (77.73%), Postives = 195/229 (85.15%), Query Frame = 0


Query: 9   ERTKIGNLWRFNRFIDNRCFAPPTLDADADVDALRRRPYRLLPRPDLIDIFVLKLDGSVF 68
           +RTKI NLWRF RFID RCFAPPTLD D D DAL RRPYRLLPR D ID+FVLKLDGSVF
Sbjct: 9   DRTKIANLWRFTRFIDYRCFAPPTLDFDPDSDALSRRPYRLLPRQDHIDLFVLKLDGSVF 68

Query: 69  GVRVSRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFCLCYEGEKLIDDKACIRVL 128
           G+RVSRN TVADLKR IE+VFDSP GSEH KITWSL+WGHFCLCYEGEKLIDDK CI+  
Sbjct: 69  GIRVSRNSTVADLKRAIEKVFDSPGGSEHYKITWSLIWGHFCLCYEGEKLIDDKTCIKGY 128

Query: 129 GIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLSAESKYVEENQLAGQDDPENYE 188
           GIKDGDQLQFIRHM+INCL MK+DRKNQTV CK +LFLS ESK VEENQ  GQDD ++Y+
Sbjct: 129 GIKDGDQLQFIRHMSINCLSMKKDRKNQTVPCKAMLFLSPESKAVEENQADGQDDFKDYQ 188

Query: 189 VHGEGSNQEE---IPMAGFQLANFFRGRLLYSRIWGFFKSASEGRNRPS 235
           VH + SN+EE   +  AGFQLAN F+GR+LYSRIWGF KSASEGRNR S
Sbjct: 189 VHRDDSNREEVASVARAGFQLANLFKGRVLYSRIWGFCKSASEGRNRAS 237

[Close]

BLAST of Lag0031285 vs. TAIR 10
Match: AT1G80060.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 146.7 bits (369), Expect = 2.3e-35
Identity = 80/198 (40.40%), Postives = 119/198 (60.10%), Query Frame = 0


Query: 43  RRRPYRLLPRPDLIDIFVLKLDGSVFGVRVSRNGTVADLKRTIEEVFDSPEGSEHCKITW 102
           RR  Y  LP    I + V+KL+GS+F V V+++ +VA+LKR +E+VF       H  I+W
Sbjct: 40  RRSSYLKLPPQGRIKLSVVKLNGSLFDVEVAKDCSVAELKRAVEQVFTISPLEGHGMISW 99

Query: 103 SLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKT 162
           S VWGHFCLCY  ++L++DK  IR LG+ DGDQL F+RH++I+  PM  ++++++ SCK 
Sbjct: 100 SHVWGHFCLCYRDQRLVNDKTSIRYLGLNDGDQLHFVRHLSIDHSPM--NKRSKSPSCKR 159

Query: 163 VLFLSAESKYVEENQLAGQDDPENYEVHGE--GSNQEEIPMAGFQLANFFRGRLLYSRIW 222
            L L   S  V E Q+  Q+     +V  +     Q+E+P A  +L N  +G L Y+  W
Sbjct: 160 YLELDV-SSIVNEIQIQNQNQNGVDDVAEKCYPGAQDELPAAESRLVNLIKGWLPYAGRW 219

Query: 223 GFFKSASEGRNRPSGFCI 239
           G  +   E R+ PS F +
Sbjct: 220 GVSRKGPECRSGPSRFSL 234

[Close]

BLAST of Lag0031285 vs. TAIR 10
Match: AT4G32270.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 3.2e-21
Identity = 55/125 (44.00%), Postives = 74/125 (59.20%), Query Frame = 0


Query: 39  VDALRRR---PYRLLPRPDLIDIFVLKLDGSVFGVRVSRNGTVADLKRTIEEVFDSPEGS 98
           +D L RR    Y  +P  + I + VLKLDGS FG++V +  TV +LK  +E  F     S
Sbjct: 19  IDGLPRRRSFNYNQMPE-EPIKLTVLKLDGSSFGIQVLKTATVGELKMAVEAAFSHLPIS 78

Query: 99  EHCKITWSLVWGHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPM-KRDRK 158
              KI+W  VWG FCL YE ++LI++   +   GIKDGDQL+FIRH++  C+ M K   K
Sbjct: 79  GPGKISWPHVWGQFCLSYEDKRLINESEYLTEFGIKDGDQLRFIRHISNYCMLMVKHKSK 138

Query: 159 NQTVS 160
              VS
Sbjct: 139 TPRVS 142

[Close]

BLAST of Lag0031285 vs. TAIR 10
Match: AT5G25340.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 9.4e-21
Identity = 54/119 (45.38%), Postives = 71/119 (59.66%), Query Frame = 0


Query: 47  YRLLPRPDLIDIFVLKLDGSVFGVRVSRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVW 106
           Y  LP  + I + VLKLDGS F V V  + TV DLK  IE  F         KI+WS VW
Sbjct: 11  YDKLPN-EPIRLSVLKLDGSSFDVYVLTSATVGDLKVAIETAFSHVPKKGPSKISWSHVW 70

Query: 107 GHFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMK-RDRKNQTVSCKTVL 165
           GHFCLC+ G+KLI D  CI   G+KDGD+++F  H++ N +  K   RK++  + + VL
Sbjct: 71  GHFCLCFGGQKLITDTDCIGNYGMKDGDEVRFKNHVSGNAVLSKGYSRKSKQKNLERVL 128

[Close]

BLAST of Lag0031285 vs. TAIR 10
Match: AT4G32270.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-17
Identity = 48/105 (45.71%), Postives = 62/105 (59.05%), Query Frame = 0


Query: 56  IDIFVLKLDGSVFGVRVSRNGTVADLKRTIEEVFDSPEGSEHCKITWSLVWGHFCLCYEG 115
           I + VLKLDGS F   V +  TV +LK  +E  F     S   KI+W  VWG FCL YE 
Sbjct: 6   IKLTVLKLDGSSF---VLKTATVGELKMAVEAAFSHLPISGPGKISWPHVWGQFCLSYED 65

Query: 116 EKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPM-KRDRKNQTVS 160
           ++LI++   +   GIKDGDQL+FIRH++  C+ M K   K   VS
Sbjct: 66  KRLINESEYLTEFGIKDGDQLRFIRHISNYCMLMVKHKSKTPRVS 107

[Close]

BLAST of Lag0031285 vs. TAIR 10
Match: AT3G07860.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 4.7e-12
Identity = 40/120 (33.33%), Postives = 64/120 (53.33%), Query Frame = 0


Query: 50  LPRPDLIDIFVLKLDGSVFGVRVSRNGTVADLKRTIEEVFDSPEGSE--HCKITWSLVWG 109
           L +   + + V+KLDGS   V V  + T+ DLK  I++  +  E +   H  I+W  VW 
Sbjct: 46  LEKGSAMRLSVVKLDGSSLDVAVMNSATLKDLKLLIKKKVNEMEQANMGHRHISWKHVWS 105

Query: 110 HFCLCYEGEKLIDDKACIRVLGIKDGDQLQFIRHMTINCLPMKRDRKNQTVSCKTVLFLS 168
           +FCL    EKL+DD A ++ +GI++  Q+ F+ ++      MK+ R   +   K  LF S
Sbjct: 106 NFCLSCNNEKLLDDNAVLQDVGIRNNSQVTFMPYV------MKKGRGRHSKRKKHRLFRS 159

The following BLAST results are available for this feature:

BLAST of Lag0031285 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022998358.1	1.3e-117	86.25	uncharacterized protein LOC111493024 [Cucurbita maxima]	[more]
XP_022948349.1	5.0e-117	85.83	uncharacterized protein LOC111452053 [Cucurbita moschata] >KAG7036517.1 U11/U12 ...	[more]
XP_023525469.1	1.1e-116	85.42	uncharacterized protein LOC111789062 [Cucurbita pepo subsp. pepo]	[more]
XP_022153470.1	1.9e-111	82.50	uncharacterized protein LOC111020973 isoform X1 [Momordica charantia] >XP_022153...	[more]
XP_038904269.1	2.1e-107	80.74	uncharacterized protein LOC120090621 isoform X1 [Benincasa hispida]	[more]

BLAST of Lag0031285 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WS8	6.6e-11	33.33	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Arabidopsis thaliana O...	[more]
Q8VIK1	8.1e-09	37.93	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Mus musculus OX=10090 ...	[more]
Q3ZBQ4	1.1e-08	37.93	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Bos taurus OX=9913 GN=...	[more]
Q9BV90	3.1e-08	36.78	U11/U12 small nuclear ribonucleoprotein 25 kDa protein OS=Homo sapiens OX=9606 G...	[more]

BLAST of Lag0031285 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KGI2	6.4e-118	86.25	uncharacterized protein LOC111493024 OS=Cucurbita maxima OX=3661 GN=LOC111493024...	[more]
A0A6J1G9M5	2.4e-117	85.83	uncharacterized protein LOC111452053 OS=Cucurbita moschata OX=3662 GN=LOC1114520...	[more]
A0A6J1DGY1	9.0e-112	82.50	uncharacterized protein LOC111020973 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A1S3BY00	4.6e-100	77.49	uncharacterized protein LOC103494657 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KTJ1	3.0e-99	77.73	Ubiquitin_4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006470...	[more]

BLAST of Lag0031285 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80060.1	2.3e-35	40.40	Ubiquitin-like superfamily protein	[more]
AT4G32270.1	3.2e-21	44.00	Ubiquitin-like superfamily protein	[more]
AT5G25340.1	9.4e-21	45.38	Ubiquitin-like superfamily protein	[more]
AT4G32270.2	1.7e-17	45.71	Ubiquitin-like superfamily protein	[more]
AT3G07860.1	4.7e-12	33.33	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 53..151 e-value: 4.3E-31 score: 108.7
None	No IPR available	PANTHER	PTHR14942:SF9	OS02G0188500 PROTEIN	coord: 21..236
IPR040610	SNRNP25, ubiquitin-like domain	PFAM	PF18036	Ubiquitin_4	coord: 57..142 e-value: 1.9E-23 score: 82.3
IPR040610	SNRNP25, ubiquitin-like domain	CDD	cd17058	Ubl_SNRNP25	coord: 56..141 e-value: 4.20251E-33 score: 113.382
IPR039690	U11/U12 small nuclear ribonucleoprotein 25kDa protein	PANTHER	PTHR14942	U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN	coord: 21..236
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 53..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0031285.1	Lag0031285.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005689	U12-type spliceosomal complex