Lag0031279 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCATATTCATATTGCAGAATGATCAGTTCATCCACAACCCTGAAGCACACCTGGACGAAAATCAAGGAGCGAAGCTAGGGGAGTGCCTCGTGTCCTTTGTCCAAGCTAGAGGTTGGAGGTTTGATAATGGGACTTTTAGACCTGGGTATTTGCCGCAACTGGAGCGTATGATGAAGGAGAAATTGCCTGAACACAAAGTTCCAACGTTGGATGCAGGGTTCGAACCCTAAAGCAACAGTATTGGGCGATTGCAGAAATGATGAGGCCCAGATGCAACGACTTTGGGTGGAACGATGAATTCAAGTGTATCGAGGCAGAGAAGAAAACATTCGACCTGTGGGTGAAGGTAAGAACGTGTTGTCATGTTAATTAAACATTGTTTATCGCTTTCTAACATGTACTTTTGGGTAAATGTAGGCCCATCCTATTGCAAAAGGCATGCGAAATAAGTCGTTCCTGCATTTTGACGACTTGGCCTATGCATTCAGAAAGGATTGA ATGTGCATATTCATATTGCAGAATGATCAGTTCATCCACAACCCTGAAGCACACCTGGACGAAAATCAAGGAGCGAAGCTAGGGGAGTGCCTCGTGTCCTTTGTCCAAGCTAGAGGTTGGAGGTTTGATAATGGGACTTTTAGACCTGGGGTTCGAACCCTAAAGCAACAGTATTGGGCGATTGCAGAAATGATGAGGCCCAGATGCAACGACTTTGGGTGGAACGATGAATTCAAGTGTATCGAGGCAGAGAAGAAAACATTCGACCTGTGGGTGAAGGCCCATCCTATTGCAAAAGGCATGCGAAATAAGTCGTTCCTGCATTTTGACGACTTGGCCTATGCATTCAGAAAGGATTGA ATGTGCATATTCATATTGCAGAATGATCAGTTCATCCACAACCCTGAAGCACACCTGGACGAAAATCAAGGAGCGAAGCTAGGGGAGTGCCTCGTGTCCTTTGTCCAAGCTAGAGGTTGGAGGTTTGATAATGGGACTTTTAGACCTGGGGTTCGAACCCTAAAGCAACAGTATTGGGCGATTGCAGAAATGATGAGGCCCAGATGCAACGACTTTGGGTGGAACGATGAATTCAAGTGTATCGAGGCAGAGAAGAAAACATTCGACCTGTGGGTGAAGGCCCATCCTATTGCAAAAGGCATGCGAAATAAGTCGTTCCTGCATTTTGACGACTTGGCCTATGCATTCAGAAAGGATTGA MCIFILQNDQFIHNPEAHLDENQGAKLGECLVSFVQARGWRFDNGTFRPGVRTLKQQYWAIAEMMRPRCNDFGWNDEFKCIEAEKKTFDLWVKAHPIAKGMRNKSFLHFDDLAYAFRKD Homology
BLAST of Lag0031279 vs. NCBI nr
Match: KAA0035413.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK25738.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 135.2 bits (339), Expect = 3.7e-28 Identity = 61/100 (61.00%), Postives = 74/100 (74.00%), Query Frame = 0
BLAST of Lag0031279 vs. NCBI nr
Match: KAA0057175.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK18787.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 128.3 bits (321), Expect = 4.5e-26 Identity = 56/100 (56.00%), Postives = 71/100 (71.00%), Query Frame = 0
BLAST of Lag0031279 vs. NCBI nr
Match: KAA0047075.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 126.3 bits (316), Expect = 1.7e-25 Identity = 59/131 (45.04%), Postives = 77/131 (58.78%), Query Frame = 0
BLAST of Lag0031279 vs. NCBI nr
Match: TYK05082.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 125.6 bits (314), Expect = 2.9e-25 Identity = 59/131 (45.04%), Postives = 76/131 (58.02%), Query Frame = 0
BLAST of Lag0031279 vs. NCBI nr
Match: KAA0041617.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK19640.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 124.4 bits (311), Expect = 6.6e-25 Identity = 61/131 (46.56%), Postives = 75/131 (57.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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