Lag0031237 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0031237
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrotransposon gag protein
Location	chr11: 6083975 .. 6087461 (-)
RNA-Seq Expression	Lag0031237
Synteny	Lag0031237

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAATAAATCCTTCTCCAAAACTTTCCACAAAAAGACAAAAGAGAACCTTGCAACTTCCTACTGCATCGACGTAGAAGAAGTTGACAATTCCAAGAAAAGTGAACAAAGGACTTCTGTCTTCGATCGCATCAAGCCTCCAACTATTCGTCCTTCAGTATTCCAAAGAATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGAAAAATGGACAACTTGGAGGTGAAACTTTTCGATGAAGTAAACCGCGACAAGAAGCTTCATAGTAGCGTCCCGTCACGTATGAAGAGGAAATTCTCTGTTCTCATAACTACAGAAGGTTCCTTGAAGGTGAAGCCAAATCTCATTGTCTTGACTAATCCTATAAATGAAGGATCTGATCAAGACCATGATAAAGATAAGAGCTTTTAAAATGTAAAAACTCCTTATCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTGAGTGCAAAAAATCTTGAACTACGTTATCACTTGATCCCTATTCCATAAGGGTACGTAGGCAGCTTAAAGAAAACTTTAAGTTCAGTCCCTATAAACAAAAAAAAAAAAAGGTTCTTCGCTGCAGTTCCTTCTCTCCAAGTTCGAGGGTCTTTACACTGTACGTTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCATTGTATCCTGCTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACAACTGCTACGTTGTTCCTCCTCCAAGTGCGAATGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCCCTCTGTTGCAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACACACTTCGCTCCAGTTCCTTCTCCCAAATTCGAAGGTTCTCATGCGCTTCGCGCTGCAGTTCCTTCCCTCCAAGTTTGAAGGTTCTCACATCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCCACAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGTTCCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACTCGCTTTGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCAAGCGCTGTGATTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCCTCTCTCCACTGTTCCTTCCTCCAAGTTGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTTCAAGTTCGAAGGCGCTTCTCTCCACTACTCCTTCTCCAAGTTCGAAGGCGTTTCTCTCCAGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGCTCCTTCTCCAAGTTCGAAGGTGCTTCTCTCCACCCCTTTTTTTTAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTCGAAGGTTCATCGTTGCTCCTTTTCAAATGTTTGGCGGCGGTTGACGTCCTCGTTCCGCTTCATCTTCAAATGTTGGCAGTTGACGGCGTTCGCTTCGCTTCATCTTCAAAAATTGACTGTTGATAACTTCACTTCATATTCAAAAGTTGACGGTTGAAGTCTTCGCTACATCTGCAAAGATGAACAACTTTAGTGTTGCCTTTATCTTGAAAGTGTCCAGACTGGAAGATGCATCTTAGCTGCAAGTTAAAAAAATGCTTGATATCAAACCACAAAAAAAAAAAAAAAAAACAATAAAAGTGTTGTTAAAAAAACGGTGAGCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAAGCTGATGACGACCATGGTGATCACCCCTGCAGTAAACTACAGTCATCAAAGTGACTGGTCTAGACAAGTGGTGAAATCACTGCAAGTGAAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAAAGCTGATGACGACCGTGGTGACCACCCCTGCAATAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGATCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAGTTTGGTGACGACTGTTGCACGAAGCTTGCACATTCAAGGAAGAAAGAAACAAATTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGAAAATTAAGAAAAAACGAAAATTAAAAAAAAAAGAAAAAAACGAAAAGTAAAAATAAAAAAAAAACGAAAATTAAAAAAAAAAATAAAAAATAAAAAGAGAAGAAATTTTCCTACATGGATCCCTTCTTGAATGCTCTCTGCAATTGATGTGTGCTCTCCCCTACTGAGGTTCAGTCTTATTTATAGGGGGAGTTTTAA

mRNA sequence

ATGTTGAATAAATCCTTCTCCAAAACTTTCCACAAAAAGACAAAAGAGAACCTTGCAACTTCCTACTGCATCGACGTAGAAGAAGTTGACAATTCCAAGAAAAGTGAACAAAGGACTTCTGTCTTCGATCGCATCAAGCCTCCAACTATTCGTCCTTCAGTATTCCAAAGAATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGAAAAATGGACAACTTGGAGGTGAAACTTTTCGATGAAGTAAACCGCGACAAGAAGCTTCATAGTAGCGTCCCGTCACGTATGAAGAGGAAATTCTCTGTTCTCATAACTACAGAAGGTTCCTTGAAGTTCCTTCTCTCCAAGTTCGAGGGTCTTTACACTGTACGTTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCATTGTATCCTGCTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACAACTGCTACGTTGTTCCTCCTCCAAGTGCGAATGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCCCTCTGTTGCAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACACACTTCGCTCCAGTTCCTTCTCCCAAATTCGAAGGTTCTCATGCGCTTCGCGCTGCAGTTCCTTCCCTCCAAGTTTGAAGGTTCTCACATCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCTCCTTCCTCCAAGTTCGAAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGTTCCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCCTCTCTCCACTGTTCCTTCCTCCAAGTTGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTTCAAGTTCGAAGGCGCTTCTCTCCACTACTCCTTCTCCAAGTTCGAAGGCGTTTCTCTCCAGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGCTCCTTCTCCAAGTTCGAAGGTGGTGAAATCACTGCAAGTGAAAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAAGCTGATGACGACCATGGTGGTGAAATCACTGCAAGTGAAAAGCTGATGACGACCGTGGTGACCACCCCTGCAATAAACTACAGTCATCAAAGTGACTGGTCTAGACAGACAGGTGGTGAAATCACTGCAAGTGAAAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGATCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGGGGAGTTTTAA

Coding sequence (CDS)

ATGTTGAATAAATCCTTCTCCAAAACTTTCCACAAAAAGACAAAAGAGAACCTTGCAACTTCCTACTGCATCGACGTAGAAGAAGTTGACAATTCCAAGAAAAGTGAACAAAGGACTTCTGTCTTCGATCGCATCAAGCCTCCAACTATTCGTCCTTCAGTATTCCAAAGAATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCAACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGAAAAATGGACAACTTGGAGGTGAAACTTTTCGATGAAGTAAACCGCGACAAGAAGCTTCATAGTAGCGTCCCGTCACGTATGAAGAGGAAATTCTCTGTTCTCATAACTACAGAAGGTTCCTTGAAGTTCCTTCTCTCCAAGTTCGAGGGTCTTTACACTGTACGTTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCATTGTATCCTGCTGCGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACAACTGCTACGTTGTTCCTCCTCCAAGTGCGAATGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCCCTCTGTTGCAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACACACTTCGCTCCAGTTCCTTCTCCCAAATTCGAAGGTTCTCATGCGCTTCGCGCTGCAGTTCCTTCCCTCCAAGTTTGAAGGTTCTCACATCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCTTCGCCACAGTTCTCCTTCCTCCAAGTTCGAAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGTTCCGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGTTGCTCCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCCTCTCTCCACTGTTCCTTCCTCCAAGTTGAAGGTTCTCATGCGCTTCGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTTCAAGTTCGAAGGCGCTTCTCTCCACTACTCCTTCTCCAAGTTCGAAGGCGTTTCTCTCCAGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGCTCCTTCTCCAAGTTCGAAGGTGGTGAAATCACTGCAAGTGAAAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAAGCTGATGACGACCATGGTGGTGAAATCACTGCAAGTGAAAAGCTGATGACGACCGTGGTGACCACCCCTGCAATAAACTACAGTCATCAAAGTGACTGGTCTAGACAGACAGGTGGTGAAATCACTGCAAGTGAAAAGCTGATGACGACCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGTGAAGCTGATGACGATCGTGGTGACCACCCCTGCAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAATCACTGCAAGGGGAGTTTTAA

Protein sequence

MLNKSFSKTFHKKTKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSLKFLLSKFEGLYTVRYCVVPSPSSKVLHCILLRCSFSKFEGSQLYNCYVVPPPSANDLMWCVVALFPLLSSSMVLTQLCWSFFSPSSKVLTPSVAVPSFQGRRFSLAALQFFLPKFEGSHTSLQFLLPNSKVLMRFALQFLPSKFEGSHIASPQFLPPSSKVHTRFATVLLPPSSKFLPPKFEGSHVASLQFLPPSLKVLTSLRSALRFVAVPSSKFEVPSSKFEGSHALRCSFLQVRRFSHALLQLLPPSSKVPSRASLAPSPSSKAPLSTVPSSKLKVLMRFVATFLQVRRFSHALLQLLPPSSKVPSRASLAPSPSSKALLSTAPSSSSKALLSTTPSPSSKAFLSSCSFSKFEGASLHCSFSKFEGASLYCSFSKFEGGEITASEKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKADDDHGGEITASEKLMTTVVTTPAINYSHQSDWSRQTGGEITASEKLMTTVVTTPAGNYSHQSDWSRQVVKSLQVKLMTIVVTTPAGNYSHQSDWSRQVVKSLQGEF

Homology

[Close]

BLAST of Lag0031237 vs. NCBI nr
Match: KAA0044978.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 154.5 bits (389), Expect = 3.4e-33
Identity = 86/125 (68.80%), Postives = 99/125 (79.20%), Query Frame = 0


Query: 27  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVS 86
           EEVDNS + +QRTSVFDRIKP T R SVFQR+SMA  EEENQC  ST  R SAF+RLS+S
Sbjct: 120 EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEENQCPTSTYARTSAFKRLSIS 179

Query: 87  TSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLIT 146
           TSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+HS VPSRMKRK SV I 
Sbjct: 180 TSKKHRPSTSAFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHSRVPSRMKRKLSVDIN 239

Query: 147 TEGSL 152
           TEGSL
Sbjct: 240 TEGSL 244

[Close]

BLAST of Lag0031237 vs. NCBI nr
Match: KAA0036008.1 (Retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 152.9 bits (385), Expect = 9.8e-33
Identity = 85/125 (68.00%), Postives = 98/125 (78.40%), Query Frame = 0


Query: 27  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVS 86
           EEVDNS + +QRTSVFDRIKP T R  VFQR+SMA  EEENQC MST  R SAF+RLS+S
Sbjct: 61  EEVDNSNEIKQRTSVFDRIKPLTTRSLVFQRLSMATKEEENQCPMSTYARTSAFKRLSIS 120

Query: 87  TSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLIT 146
           TSKK +PSTS FDRLK+T+DQ +R+M + + K F E N D K+HS VPSRMKRK SV I 
Sbjct: 121 TSKKHRPSTSAFDRLKMTNDQQQREMKSFKAKPFHEENDDDKIHSRVPSRMKRKLSVDIN 180

Query: 147 TEGSL 152
           TEGSL
Sbjct: 181 TEGSL 185

[Close]

BLAST of Lag0031237 vs. NCBI nr
Match: KAA0050736.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYJ95700.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 152.1 bits (383), Expect = 1.7e-32
Identity = 84/125 (67.20%), Postives = 100/125 (80.00%), Query Frame = 0


Query: 27  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVS 86
           EEVDNS + +QRTSVFDRIKP T R SVFQR+SMA  EEENQC MST TR SAF+RLS+S
Sbjct: 371 EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEENQCPMSTYTRTSAFKRLSIS 430

Query: 87  TSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLIT 146
            SKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K++S VPSR+KRK S+ I 
Sbjct: 431 RSKKHRPSTSAFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIYSRVPSRIKRKLSIDIN 490

Query: 147 TEGSL 152
           TEGSL
Sbjct: 491 TEGSL 495

[Close]

BLAST of Lag0031237 vs. NCBI nr
Match: TYK08944.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 151.8 bits (382), Expect = 2.2e-32
Identity = 84/125 (67.20%), Postives = 99/125 (79.20%), Query Frame = 0


Query: 27  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVS 86
           EEVDNS + +QRTSVFDRIKP T R SVFQR+SMA  EE+NQC  ST  R SAF+RLS+S
Sbjct: 537 EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEKNQCPTSTYARTSAFKRLSIS 596

Query: 87  TSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLIT 146
           TSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+H+ VPSRMKRK SV I 
Sbjct: 597 TSKKHRPSTSTFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHNRVPSRMKRKLSVDIN 656

Query: 147 TEGSL 152
           TEGSL
Sbjct: 657 TEGSL 661

[Close]

BLAST of Lag0031237 vs. NCBI nr
Match: KAA0055462.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 151.8 bits (382), Expect = 2.2e-32
Identity = 84/125 (67.20%), Postives = 99/125 (79.20%), Query Frame = 0


Query: 27  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVS 86
           EEVDNS + +QRTSVFDRIKP T R SVFQR+SMA  EE+NQC  ST  R SAF+RLS+S
Sbjct: 537 EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEKNQCPTSTYARTSAFKRLSIS 596

Query: 87  TSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLIT 146
           TSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+H+ VPSRMKRK SV I 
Sbjct: 597 TSKKHRPSTSTFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHNRVPSRMKRKLSVDIN 656

Query: 147 TEGSL 152
           TEGSL
Sbjct: 657 TEGSL 661

[Close]

BLAST of Lag0031237 vs. ExPASy TrEMBL
Match: A0A5A7TQ06 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002860 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.6e-33
Identity = 86/125 (68.80%), Postives = 99/125 (79.20%), Query Frame = 0


Query: 27  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVS 86
           EEVDNS + +QRTSVFDRIKP T R SVFQR+SMA  EEENQC  ST  R SAF+RLS+S
Sbjct: 120 EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEENQCPTSTYARTSAFKRLSIS 179

Query: 87  TSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLIT 146
           TSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+HS VPSRMKRK SV I 
Sbjct: 180 TSKKHRPSTSAFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHSRVPSRMKRKLSVDIN 239

Query: 147 TEGSL 152
           TEGSL
Sbjct: 240 TEGSL 244

[Close]

BLAST of Lag0031237 vs. ExPASy TrEMBL
Match: A0A5A7SZJ7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18735G00010 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.8e-33
Identity = 85/125 (68.00%), Postives = 98/125 (78.40%), Query Frame = 0


Query: 27  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVS 86
           EEVDNS + +QRTSVFDRIKP T R  VFQR+SMA  EEENQC MST  R SAF+RLS+S
Sbjct: 61  EEVDNSNEIKQRTSVFDRIKPLTTRSLVFQRLSMATKEEENQCPMSTYARTSAFKRLSIS 120

Query: 87  TSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLIT 146
           TSKK +PSTS FDRLK+T+DQ +R+M + + K F E N D K+HS VPSRMKRK SV I 
Sbjct: 121 TSKKHRPSTSAFDRLKMTNDQQQREMKSFKAKPFHEENDDDKIHSRVPSRMKRKLSVDIN 180

Query: 147 TEGSL 152
           TEGSL
Sbjct: 181 TEGSL 185

[Close]

BLAST of Lag0031237 vs. ExPASy TrEMBL
Match: A0A5A7U974 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00280 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 8.1e-33
Identity = 84/125 (67.20%), Postives = 100/125 (80.00%), Query Frame = 0


Query: 27  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVS 86
           EEVDNS + +QRTSVFDRIKP T R SVFQR+SMA  EEENQC MST TR SAF+RLS+S
Sbjct: 371 EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEENQCPMSTYTRTSAFKRLSIS 430

Query: 87  TSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLIT 146
            SKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K++S VPSR+KRK S+ I 
Sbjct: 431 RSKKHRPSTSAFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIYSRVPSRIKRKLSIDIN 490

Query: 147 TEGSL 152
           TEGSL
Sbjct: 491 TEGSL 495

[Close]

BLAST of Lag0031237 vs. ExPASy TrEMBL
Match: A0A5D3BBF9 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00250 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.1e-32
Identity = 84/125 (67.20%), Postives = 98/125 (78.40%), Query Frame = 0


Query: 27  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVS 86
           EEVDNS + +QRTS+FDRIKP T R  VFQR+SMA  EEENQC  ST  R SAF+RLS+S
Sbjct: 61  EEVDNSNEIKQRTSIFDRIKPLTTRSLVFQRLSMATKEEENQCPTSTYARTSAFKRLSIS 120

Query: 87  TSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLIT 146
           TSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+HS VPSRMKRK SV I 
Sbjct: 121 TSKKHRPSTSAFDRLKMTNDQQQREMKSLKAKPFHEENGDDKIHSRVPSRMKRKLSVDIN 180

Query: 147 TEGSL 152
           TEGSL
Sbjct: 181 TEGSL 185

[Close]

BLAST of Lag0031237 vs. ExPASy TrEMBL
Match: A0A5A7UI09 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold221G00340 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.1e-32
Identity = 84/125 (67.20%), Postives = 99/125 (79.20%), Query Frame = 0


Query: 27  EEVDNSKKSEQRTSVFDRIKPPTIRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVS 86
           EEVDNS + +QRTSVFDRIKP T R SVFQR+SMA  EE+NQC  ST  R SAF+RLS+S
Sbjct: 537 EEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEKNQCPTSTYARTSAFKRLSIS 596

Query: 87  TSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLIT 146
           TSKK +PSTS FDRLK+T+DQ +R+M +L+ K F E N D K+H+ VPSRMKRK SV I 
Sbjct: 597 TSKKHRPSTSTFDRLKMTNDQQQREMKSLKAKPFHEENDDDKIHNRVPSRMKRKLSVDIN 656

Query: 147 TEGSL 152
           TEGSL
Sbjct: 657 TEGSL 661

The following BLAST results are available for this feature:

BLAST of Lag0031237 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044978.1	3.4e-33	68.80	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
KAA0036008.1	9.8e-33	68.00	Retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
KAA0050736.1	1.7e-32	67.20	retrotransposon gag protein [Cucumis melo var. makuwa] >TYJ95700.1 retrotranspos...	[more]
TYK08944.1	2.2e-32	67.20	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
KAA0055462.1	2.2e-32	67.20	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]

BLAST of Lag0031237 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0031237 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TQ06	1.6e-33	68.80	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5A7SZJ7	4.8e-33	68.00	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5A7U974	8.1e-33	67.20	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5D3BBF9	1.1e-32	67.20	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7UI09	1.1e-32	67.20	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]

BLAST of Lag0031237 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 402..422
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 456..476

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0031237.1	Lag0031237.1	mRNA